Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_K07
(961 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 117 5e-25
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 96 1e-18
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 89 2e-16
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 4e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 54 7e-06
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 53 9e-06
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 43 0.013
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 42 0.023
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.094
UniRef50_A3K5L5 Cluster: Amidase; n=2; Proteobacteria|Rep: Amida... 35 2.7
UniRef50_A6G1S3 Cluster: Putative uncharacterized protein; n=1; ... 34 4.7
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 6.2
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 117 bits (281), Expect = 5e-25
Identities = 68/112 (60%), Positives = 73/112 (65%)
Frame = +2
Query: 317 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 496
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 497 GTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCAL 652
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCAL
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCAL 125
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 96.3 bits (229), Expect = 1e-18
Identities = 47/56 (83%), Positives = 48/56 (85%)
Frame = +2
Query: 485 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCAL 652
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCAL
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCAL 57
Score = 63.3 bits (147), Expect = 9e-09
Identities = 26/33 (78%), Positives = 27/33 (81%)
Frame = +3
Query: 627 PWKLPRALSLFRPCRLPDTCPPFSLREAWRFLI 725
P + P LFRPCRLPDTCPPFSLREAWRFLI
Sbjct: 49 PLEAPSCALLFRPCRLPDTCPPFSLREAWRFLI 81
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 89.0 bits (211), Expect = 2e-16
Identities = 42/50 (84%), Positives = 44/50 (88%)
Frame = +2
Query: 503 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCAL 652
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCAL
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCAL 93
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 4e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -1
Query: 493 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 380
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 293 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 460
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 53.6 bits (123), Expect = 7e-06
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = +2
Query: 653 PVPTLPLTGYLSAFLPSGSVALSH 724
PVPTLPLTGYLSAFLPSGSVALSH
Sbjct: 4 PVPTLPLTGYLSAFLPSGSVALSH 27
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 53.2 bits (122), Expect = 9e-06
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Frame = +2
Query: 392 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 565
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 566 IDAQVRGGETRQDYKDTRRFPLEAPSCALPVP 661
I Q + +T+ +YK T FPL++PS +L P
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFP 113
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 412 HSKAVIRLSTESGDNAGKNM 471
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 42.7 bits (96), Expect = 0.013
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2
Query: 95 DPDMIXYIDEFGQTTTRMQ 151
DPDMI YIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 41.9 bits (94), Expect = 0.023
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +3
Query: 219 INKLTTTIAFILCFRFRXEVWEVFSALMNRPTRGERRFAYW 341
+++LT L RF V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.094
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -2
Query: 363 ERGSGRAPNTQTASPRALADSLMQ 292
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A3K5L5 Cluster: Amidase; n=2; Proteobacteria|Rep: Amidase
- Sagittula stellata E-37
Length = 492
Score = 35.1 bits (77), Expect = 2.7
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = +2
Query: 536 GSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALPVPTLPLTGYLSAFLPSG 706
G APL S + +V G R DY D F A +C LP +LP+ G+ ++ LP G
Sbjct: 383 GLAPLPSEVEYPKEVAGRPCR-DYLDWLSFAFLATTCGLPALSLPV-GFTASGLPVG 437
>UniRef50_A6G1S3 Cluster: Putative uncharacterized protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Putative
uncharacterized protein - Plesiocystis pacifica SIR-1
Length = 793
Score = 34.3 bits (75), Expect = 4.7
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = -1
Query: 721 RKRHA-SRREKGGQVSGKRQGRNRESARGSFQ-GETPGIFIVLSGFATSDLSVDFCDARQ 548
RKR A S R+ GG+ G+ QG+ R ARG GE G +G + D R+
Sbjct: 716 RKRIALSARKSGGKGQGQGQGQGRNEARGGRDGGERKG---SNAGKRSGSKGRD----RR 768
Query: 547 GGGAYGKTPATRPFYGSWPFAGL 479
GGG G+ P + + PFA L
Sbjct: 769 GGGKGGRREQRDPGFSNNPFAKL 791
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 6.2
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -1
Query: 502 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 380
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,041,285
Number of Sequences: 1657284
Number of extensions: 13293054
Number of successful extensions: 39597
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 37748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39558
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 88998789286
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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