Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_K06
(877 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q49AN0 Cluster: Cryptochrome-2; n=106; Eumetazoa|Rep: C... 137 4e-31
UniRef50_Q52Z99 Cluster: 6-4 photolyase; n=4; Viridiplantae|Rep:... 129 8e-29
UniRef50_A7S6B3 Cluster: Predicted protein; n=3; Nematostella ve... 126 7e-28
UniRef50_Q4T244 Cluster: Chromosome undetermined SCAF10345, whol... 89 4e-25
UniRef50_A7P7Q6 Cluster: Chromosome chr9 scaffold_7, whole genom... 114 2e-24
UniRef50_O48652 Cluster: 6-4 photolyase; n=3; Arabidopsis thalia... 113 6e-24
UniRef50_Q4SAM2 Cluster: Chromosome undetermined SCAF14682, whol... 113 7e-24
UniRef50_Q4T243 Cluster: Chromosome undetermined SCAF10345, whol... 89 1e-23
UniRef50_Q7ZYX5 Cluster: Cry4 protein; n=13; Euteleostomi|Rep: C... 111 2e-23
UniRef50_A7S6B1 Cluster: Predicted protein; n=1; Nematostella ve... 110 5e-23
UniRef50_Q019Z4 Cluster: Cryptochrome-like protein 1; n=4; Ostre... 107 5e-22
UniRef50_Q4PCL9 Cluster: Putative uncharacterized protein; n=1; ... 102 1e-20
UniRef50_A4QZX5 Cluster: Putative uncharacterized protein; n=1; ... 93 8e-18
UniRef50_O77059 Cluster: CG3772-PA; n=15; Coelomata|Rep: CG3772-... 90 6e-17
UniRef50_A2R6W6 Cluster: Cofactor: FAD; n=1; Aspergillus niger|R... 90 6e-17
UniRef50_A1CJL8 Cluster: DNA photolyase, putative; n=4; Pezizomy... 81 5e-14
UniRef50_A4M6R0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 67 5e-10
UniRef50_A0M4X6 Cluster: Cryptochrome-like DNA photolyase family... 67 5e-10
UniRef50_Q6L055 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 66 1e-09
UniRef50_Q1RKC7 Cluster: Deoxyribodipyrimidine photo-lyase; n=2;... 65 2e-09
UniRef50_Q11W86 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 65 2e-09
UniRef50_A5UYV1 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 62 1e-08
UniRef50_Q12TR5 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 62 1e-08
UniRef50_Q116U8 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 60 7e-08
UniRef50_Q4KML2 Cluster: Cryptochrome DASH; n=11; cellular organ... 59 1e-07
UniRef50_Q1W7G4 Cluster: DNA photolyase protein; n=22; Magnoliop... 59 2e-07
UniRef50_A6EG08 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 58 2e-07
UniRef50_Q8LB72 Cluster: Blue-light photoreceptor PHR2; n=2; Ara... 58 2e-07
UniRef50_Q83CE4 Cluster: Deoxyribodipyrimidine photolyase-class ... 58 3e-07
UniRef50_Q6ML17 Cluster: Deoxyribodipyrimidine photolyase-class ... 57 5e-07
UniRef50_Q0IDI4 Cluster: Deoxyribodipyrimidine photolyase; n=10;... 56 1e-06
UniRef50_A1ZPZ8 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 56 1e-06
UniRef50_Q86RA1 Cluster: Photolyase related protein; n=1; Aphroc... 55 2e-06
UniRef50_A3J6I6 Cluster: Deoxyribodipyrimidine photolyase; n=4; ... 54 5e-06
UniRef50_Q652J5 Cluster: Deoxyribodipyrimidine photolyase family... 53 1e-05
UniRef50_Q84KJ5 Cluster: Cryptochrome DASH, chloroplast/mitochon... 53 1e-05
UniRef50_UPI0000E87D35 Cluster: deoxyribodipyrimidine photo-lyas... 52 1e-05
UniRef50_Q2BAD6 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 52 1e-05
UniRef50_P27526 Cluster: Deoxyribodipyrimidine photo-lyase; n=16... 52 2e-05
UniRef50_Q2S3C6 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 52 3e-05
UniRef50_Q98RW5 Cluster: Putative uncharacterized protein orf272... 52 3e-05
UniRef50_Q23DL8 Cluster: FAD binding domain of DNA photolyase fa... 51 3e-05
UniRef50_Q3E438 Cluster: DNA photolyase, FAD-binding:DNA photoly... 51 4e-05
UniRef50_A1SER8 Cluster: Deoxyribodipyrimidine photo-lyase; n=12... 51 4e-05
UniRef50_Q3VTE5 Cluster: Deoxyribodipyrimidine photolyase; n=3; ... 50 6e-05
UniRef50_A4A625 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 50 6e-05
UniRef50_Q1VSH4 Cluster: Deoxyribodipyrimidine photolyase-class ... 50 8e-05
UniRef50_A4IYV0 Cluster: Deoxyribodipyrimidine photolyase; n=14;... 50 1e-04
UniRef50_A1SV39 Cluster: DNA photolyase, FAD-binding-domain prot... 50 1e-04
UniRef50_A7D5J0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 49 1e-04
UniRef50_Q2JW81 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 49 2e-04
UniRef50_Q55081 Cluster: Deoxyribodipyrimidine photo-lyase; n=15... 49 2e-04
UniRef50_Q15ZK4 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 48 3e-04
UniRef50_A0YV59 Cluster: Deoxyribodipyrimidine photolyase; n=4; ... 48 3e-04
UniRef50_Q2FRR1 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 48 3e-04
UniRef50_Q46H89 Cluster: Deoxyribodipyrimidine photolyase; n=7; ... 48 4e-04
UniRef50_Q0BXN5 Cluster: Deoxyribodipyrimidine photolyase family... 48 4e-04
UniRef50_A7P504 Cluster: Chromosome chr4 scaffold_6, whole genom... 48 4e-04
UniRef50_A0Y3K3 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 47 7e-04
UniRef50_UPI0000F1E94A Cluster: PREDICTED: hypothetical protein;... 46 0.001
UniRef50_Q95UQ7 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 46 0.001
UniRef50_A5GQG9 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 46 0.002
UniRef50_A3JAL3 Cluster: Deoxyribodipyrimidine photolyase; n=4; ... 46 0.002
UniRef50_A6GLE5 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 45 0.002
UniRef50_Q4FL16 Cluster: Deoxyribodipyrimidine photolyase; n=4; ... 45 0.003
UniRef50_A2BUZ7 Cluster: Putative deoxyribodipyrimidine photolya... 45 0.003
UniRef50_A1U5B0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 45 0.003
UniRef50_A0LR66 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 44 0.004
UniRef50_Q9SB34 Cluster: Putative uncharacterized protein F24A6.... 44 0.004
UniRef50_A3ETQ4 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 44 0.005
UniRef50_P12769 Cluster: Deoxyribodipyrimidine photo-lyase; n=5;... 44 0.005
UniRef50_Q5FS98 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 44 0.007
UniRef50_Q087D0 Cluster: Deoxyribodipyrimidine photo-lyase; n=3;... 44 0.007
UniRef50_Q6CSJ7 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 44 0.007
UniRef50_Q5IFN2 Cluster: Cryptochrome DASH, chloroplast/mitochon... 44 0.007
UniRef50_Q1N8J8 Cluster: Deoxyribodipyrimidine photolyase; n=5; ... 43 0.009
UniRef50_A4GI46 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 43 0.009
UniRef50_Q5V438 Cluster: Photolyase/cryptochrome; n=3; Halobacte... 43 0.009
UniRef50_Q6HWS5 Cluster: Deoxyribodipyrimidine photolyase family... 43 0.012
UniRef50_Q4P1D4 Cluster: Putative uncharacterized protein; n=1; ... 43 0.012
UniRef50_Q6NKC0 Cluster: Putative riboflavin biosynthesis protei... 42 0.016
UniRef50_Q5UUY8 Cluster: Class-II photolyase; n=1; Antonospora l... 42 0.016
UniRef50_Q47SJ5 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 42 0.021
UniRef50_A1SV40 Cluster: Deoxyribodipyrimidine photo-lyase; n=9;... 42 0.027
UniRef50_UPI0000E0FEEE Cluster: Deoxyribodipyrimidine photolyase... 41 0.036
UniRef50_Q1VSH5 Cluster: Putative deoxyribodipyrimidine photolya... 41 0.047
UniRef50_Q1MZD6 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 41 0.047
UniRef50_Q4KT08 Cluster: DNA photolyase 2; n=2; Baculoviridae|Re... 40 0.063
UniRef50_Q2SQU0 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 40 0.063
UniRef50_A7QWQ7 Cluster: Chromosome chr16 scaffold_207, whole ge... 40 0.063
UniRef50_A5WDG4 Cluster: Deoxyribodipyrimidine photo-lyase; n=3;... 40 0.083
UniRef50_A7SYS9 Cluster: Predicted protein; n=1; Nematostella ve... 40 0.11
UniRef50_Q0S6Q2 Cluster: Deoxyribodipyrimidine photo-lyase; n=3;... 39 0.14
UniRef50_A0Z3E3 Cluster: Deoxyribodipyrimidine photolyase, putat... 39 0.14
UniRef50_Q43125 Cluster: Cryptochrome-1; n=55; Streptophyta|Rep:... 39 0.14
UniRef50_A6CY79 Cluster: Deoxyribodipyrimidine photolyase; n=3; ... 39 0.19
UniRef50_A4SQP9 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 39 0.19
UniRef50_A4B643 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 39 0.19
UniRef50_Q6EAM9 Cluster: Cryptochrome 2A apoprotein; n=4; rosids... 39 0.19
UniRef50_Q0GKU4 Cluster: Cryptochrome 1 protein; n=1; Brassica r... 39 0.19
UniRef50_Q0V6S3 Cluster: Putative uncharacterized protein; n=1; ... 39 0.19
UniRef50_P34205 Cluster: Deoxyribodipyrimidine photo-lyase; n=3;... 39 0.19
UniRef50_A4CPD0 Cluster: Deoxyribodipyrimidine photolyase; n=4; ... 38 0.25
UniRef50_A1KB68 Cluster: Deoxyribodipyrimidine photo-lyase; n=24... 38 0.25
UniRef50_A0Q6Z2 Cluster: Deoxyribodipyrimidine photolyase; n=6; ... 38 0.25
UniRef50_P05066 Cluster: Deoxyribodipyrimidine photo-lyase, mito... 38 0.25
UniRef50_Q9KR33 Cluster: Cryptochrome DASH; n=22; Gammaproteobac... 38 0.25
UniRef50_A6EZB3 Cluster: Deoxyribodipyrimidine photolyase family... 38 0.33
UniRef50_Q1G0Y2 Cluster: Cryptochrome dash; n=1; Karenia brevis|... 38 0.33
UniRef50_UPI0000E0FEC6 Cluster: deoxyribodipyrimidine photolyase... 38 0.44
UniRef50_Q41DS7 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 38 0.44
UniRef50_Q1GUF7 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 38 0.44
UniRef50_A6H180 Cluster: Deoxyribodipyrimidine photolyase PhrB2;... 38 0.44
UniRef50_A4A8B3 Cluster: Deoxyribodipyrimidine photo-lyase; n=4;... 38 0.44
UniRef50_Q712D5 Cluster: Cryptochrome 2; n=7; Oryza sativa|Rep: ... 38 0.44
UniRef50_A0DDP5 Cluster: Chromosome undetermined scaffold_47, wh... 38 0.44
UniRef50_Q5NMI6 Cluster: DNA photolyase; n=1; Zymomonas mobilis|... 37 0.58
UniRef50_Q4USX1 Cluster: Photolyase-like protein; n=6; Xanthomon... 37 0.58
UniRef50_Q6SFP7 Cluster: Deoxyribodipyrimidine photolyase family... 37 0.58
UniRef50_A4BJR5 Cluster: Putative deoxyribodipyrimidine photolya... 37 0.58
UniRef50_Q8TNY8 Cluster: Putative uncharacterized protein; n=5; ... 37 0.58
UniRef50_Q8D319 Cluster: PhrB protein; n=1; Wigglesworthia gloss... 37 0.77
UniRef50_Q0C191 Cluster: Deoxyribodipyrimidine photolyase family... 37 0.77
UniRef50_Q7RKS9 Cluster: FAD binding domain of DNA photolyase, p... 37 0.77
UniRef50_P12768 Cluster: Deoxyribodipyrimidine photo-lyase; n=6;... 37 0.77
UniRef50_UPI000155ED35 Cluster: PREDICTED: hypothetical protein;... 36 1.0
UniRef50_Q6AK21 Cluster: Probable DNA photolyase; n=1; Desulfota... 36 1.0
UniRef50_A1ZF62 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 36 1.0
UniRef50_Q5LS53 Cluster: Deoxyribodipyrimidine photolyase; n=25;... 36 1.4
UniRef50_Q3W0H9 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 36 1.4
UniRef50_A2FJY4 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_Q28811 Cluster: Deoxyribodipyrimidine photo-lyase; n=26... 36 1.4
UniRef50_P57386 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 36 1.4
UniRef50_Q5QXE0 Cluster: Cryptochrome DASH; n=4; Gammaproteobact... 36 1.4
UniRef50_Q1VN24 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 36 1.8
UniRef50_Q1MZA5 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 36 1.8
UniRef50_A4B8N9 Cluster: Deoxyribodipyrimidine photolyase, putat... 36 1.8
UniRef50_Q8PYK9 Cluster: Deoxyribodipyrimidine photolyase; n=3; ... 36 1.8
UniRef50_Q0N448 Cluster: DNA photolyase 2; n=1; Clanis bilineata... 35 2.4
UniRef50_Q5ZYZ9 Cluster: Deoxyribodipyrimidine photolyase; n=4; ... 35 2.4
UniRef50_Q28R72 Cluster: Deoxyribodipyrimidine photolyase; n=5; ... 35 2.4
UniRef50_A1WVH9 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 35 2.4
UniRef50_A0L6R4 Cluster: Deoxyribodipyrimidine photo-lyase; n=4;... 35 2.4
UniRef50_Q42696 Cluster: CPH1; n=4; Viridiplantae|Rep: CPH1 - Ch... 35 2.4
UniRef50_A5K9M1 Cluster: Deoxyribodipyrimidine photolyase, putat... 35 2.4
UniRef50_Q834P4 Cluster: Deoxyribodipyrimidine photolyase; n=14;... 35 3.1
UniRef50_Q2BJV5 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 35 3.1
UniRef50_Q0APK4 Cluster: Deoxyribodipyrimidine photo-lyase; n=2;... 35 3.1
UniRef50_Q15TU1 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 34 4.1
UniRef50_A6LRL4 Cluster: ATP-dependent protease; n=1; Clostridiu... 34 4.1
UniRef50_A3X5Z0 Cluster: Deoxyribodipyrimidine photolyase; n=3; ... 34 4.1
UniRef50_Q6MDF3 Cluster: Putative photolyase; n=1; Candidatus Pr... 34 5.5
UniRef50_Q8GFD6 Cluster: MobX; n=1; Enterococcus faecalis|Rep: M... 34 5.5
UniRef50_Q6WS77 Cluster: Type II CPD DNA photolyase; n=2; Euphyl... 34 5.5
UniRef50_A2ZFJ6 Cluster: Putative uncharacterized protein; n=1; ... 34 5.5
UniRef50_Q5QGR3 Cluster: Alanyl-tRNA synthetase; n=2; Entamoeba|... 34 5.5
UniRef50_Q18K78 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 34 5.5
UniRef50_Q8F9A2 Cluster: Purine NTPase, putative; n=4; Leptospir... 33 7.2
UniRef50_Q8F5M3 Cluster: Polysaccharide biosynthesis protein; n=... 33 7.2
UniRef50_Q0VRI4 Cluster: DNA photolyase; n=1; Alcanivorax borkum... 33 7.2
UniRef50_A0JYK6 Cluster: Deoxyribodipyrimidine photo-lyase; n=11... 33 7.2
UniRef50_Q8IKQ2 Cluster: Putative uncharacterized protein; n=1; ... 33 7.2
UniRef50_Q7RTE9 Cluster: Streptococcus pyogenes AMV258, putative... 33 7.2
UniRef50_Q9HQ46 Cluster: Deoxyribodipyrimidine photo-lyase; n=5;... 33 7.2
UniRef50_UPI00006CBFCE Cluster: TPR Domain containing protein; n... 33 9.5
UniRef50_Q6KHM8 Cluster: Hypothetical membrane protein; n=1; Myc... 33 9.5
UniRef50_Q2SRL8 Cluster: Membrane protein, putative; n=1; Mycopl... 33 9.5
UniRef50_A2ELU8 Cluster: Dihydroorotate dehydrogenase family pro... 33 9.5
UniRef50_A2DFS8 Cluster: Putative uncharacterized protein; n=1; ... 33 9.5
UniRef50_A7EMR0 Cluster: Putative uncharacterized protein; n=1; ... 33 9.5
>UniRef50_Q49AN0 Cluster: Cryptochrome-2; n=106; Eumetazoa|Rep:
Cryptochrome-2 - Homo sapiens (Human)
Length = 593
Score = 137 bits (331), Expect = 4e-31
Identities = 70/170 (41%), Positives = 109/170 (64%), Gaps = 3/170 (1%)
Frame = +3
Query: 153 TATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDP--NIKDKVGINRLRFLLQ 326
+A+ +HWFR LR+HDN AL A+ A +R +Y LDP VGINR RFLLQ
Sbjct: 21 SASSVHWFRKGLRLHDNPALLAAVRGAR----CVRCVYILDPWFAASSSVGINRWRFLLQ 76
Query: 327 SLEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIA 506
SLEDLD++L+KLN+ L+V+RG+ D+ P+LF +W V LT + D +P ++D I +A
Sbjct: 77 SLEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEYDSEPFGKERDAAIMKMA 136
Query: 507 EKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINV-KEPI 653
++ GV + HT+YD+ +++ N PLTY++F +++ + + K+P+
Sbjct: 137 KEAGVEVVTENSHTLYDLDRIIELNGQKPPLTYKRFQAIISRMELPKKPV 186
>UniRef50_Q52Z99 Cluster: 6-4 photolyase; n=4; Viridiplantae|Rep:
6-4 photolyase - Dunaliella salina
Length = 600
Score = 129 bits (312), Expect = 8e-29
Identities = 69/182 (37%), Positives = 105/182 (57%), Gaps = 4/182 (2%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI----KDKVGINRLRFLLQSL 332
I WFR LR+HDN ALR+A + + PI+ +DP +KVG+NR +FLL+SL
Sbjct: 52 ILWFRKGLRLHDNPALRDACTGSA----AVFPIFIIDPYFLQKSNNKVGVNRYQFLLESL 107
Query: 333 EDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEK 512
DL+S+L L + L VLRG +++P++ DW +K L ++D +P +D ++D+A +
Sbjct: 108 SDLNSSLTSLGSQLLVLRGTPEEVIPRVLRDWSIKKLCYEIDTEPYAKARDARVDDMARE 167
Query: 513 KGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPI 692
GV + K HT+YD ++REN G PLT Q F LV V P+ ++ P+
Sbjct: 168 AGVEVKKHWSHTLYDTDMLVRENKGKAPLTMQAFEKLVD--RVGHPLTALPAPTARLPPV 225
Query: 693 DI 698
D+
Sbjct: 226 DV 227
>UniRef50_A7S6B3 Cluster: Predicted protein; n=3; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 513
Score = 126 bits (304), Expect = 7e-28
Identities = 63/159 (39%), Positives = 93/159 (58%), Gaps = 2/159 (1%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGI--NRLRFLLQSLED 338
+HWFR DLR+HDN AL + + +YFLDP + + NR FLL+SL D
Sbjct: 19 MHWFRKDLRLHDNPALLESFKNCQ----AFYGVYFLDPASVQRSNLSPNRWWFLLESLRD 74
Query: 339 LDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 518
LD NL+ L + L V+RG+ V +PKL D W +K LT + D +P Q+D + +A+ G
Sbjct: 75 LDYNLRSLGSRLLVVRGQPVQEMPKLLDQWNIKRLTLEYDSEPPAKQRDAVVTHLAKNLG 134
Query: 519 VFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSI 635
V + +RV HT+YDV VL N+G +P+T+ + + +
Sbjct: 135 VEVIQRVSHTLYDVETVLETNDGKLPMTFDEMAKTAEQL 173
>UniRef50_Q4T244 Cluster: Chromosome undetermined SCAF10345, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF10345,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 662
Score = 88.6 bits (210), Expect(2) = 4e-25
Identities = 45/86 (52%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD--KVGINRLRFLLQSLED 338
+HWFR LR+HDN AL+ A++ A++ LR +Y LDP VGINR RFLL++LED
Sbjct: 6 VHWFRKGLRLHDNPALQEALSGADS----LRCVYVLDPWFAGAANVGINRWRFLLEALED 61
Query: 339 LDSNLKKLNTCLYVLRGKAVDLLPKL 416
LD +LKKLN+ L+V+RG+ D+ P+L
Sbjct: 62 LDCSLKKLNSRLFVVRGQPTDVFPRL 87
Score = 49.6 bits (113), Expect(2) = 4e-25
Identities = 22/73 (30%), Positives = 45/73 (61%)
Frame = +3
Query: 423 DWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLT 602
+W+V LT + D +P ++D I +A++ GV R HT+Y++ +++ NN + PLT
Sbjct: 126 EWKVTRLTFEYDPEPYGKERDGAIIKMAQQFGVETIVRNSHTLYNLDRIVEMNNNSPPLT 185
Query: 603 YQKFLSLVKSINV 641
+++F ++V + +
Sbjct: 186 FKRFQTIVSRLEL 198
>UniRef50_A7P7Q6 Cluster: Chromosome chr9 scaffold_7, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr9 scaffold_7, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 547
Score = 114 bits (275), Expect = 2e-24
Identities = 62/168 (36%), Positives = 102/168 (60%), Gaps = 8/168 (4%)
Frame = +3
Query: 144 MSKTATVIHWFRLDLRIHDNLALRNAINEAE--NRKHLLRPIYFL--DPNI----KDKVG 299
M+ ++ + WFR LRIHDN AL++A E+ ++ P YF+ DPN + G
Sbjct: 1 MASGSSSLMWFRKGLRIHDNPALQHAAKESNCVYPVFVIDP-YFMEPDPNAFSPGSSRAG 59
Query: 300 INRLRFLLQSLEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQ 479
+NR+RFLL+SL DLDS+L++L + L VL+G +++ + +W+VK L + D DP +
Sbjct: 60 LNRIRFLLESLVDLDSSLRQLGSRLLVLKGDPGEVIIRCLKEWEVKRLCFEYDTDPYYQA 119
Query: 480 QDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSL 623
D +++ A G+ + V HT++D +++++N G PL+YQ FL L
Sbjct: 120 LDIKVKNYASAAGIEVFSPVSHTLFDSAEIIQKNGGRPPLSYQSFLKL 167
>UniRef50_O48652 Cluster: 6-4 photolyase; n=3; Arabidopsis
thaliana|Rep: 6-4 photolyase - Arabidopsis thaliana
(Mouse-ear cress)
Length = 537
Score = 113 bits (272), Expect = 6e-24
Identities = 59/162 (36%), Positives = 94/162 (58%), Gaps = 11/162 (6%)
Frame = +3
Query: 171 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD-----------KVGINRLRF 317
WFR LR+HDN AL A +E + P++ +DP+ + + G+NR+RF
Sbjct: 10 WFRKGLRVHDNPALEYASKGSE----FMYPVFVIDPHYMESDPSAFSPGSSRAGVNRIRF 65
Query: 318 LLQSLEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIE 497
LL+SL+DLDS+LKKL + L V +G+ ++L + +W+VK L + D DP + D ++
Sbjct: 66 LLESLKDLDSSLKKLGSRLLVFKGEPGEVLVRCLQEWKVKRLCFEYDTDPYYQALDVKVK 125
Query: 498 DIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSL 623
D A GV + V HT+++ ++ +N G PL+YQ FL +
Sbjct: 126 DYASSTGVEVFSPVSHTLFNPAHIIEKNGGKPPLSYQSFLKV 167
>UniRef50_Q4SAM2 Cluster: Chromosome undetermined SCAF14682, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14682,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 606
Score = 113 bits (271), Expect = 7e-24
Identities = 55/137 (40%), Positives = 91/137 (66%), Gaps = 3/137 (2%)
Frame = +3
Query: 309 LRFLLQSLEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDE 488
LRFLLQ LEDLD+NL+KLN+ L+V+RG+ ++ P+LF +W++ LT + D +P ++D
Sbjct: 19 LRFLLQCLEDLDANLRKLNSRLFVIRGQPANVFPRLFKEWKISRLTFEYDSEPFGKERDA 78
Query: 489 YIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKE-PIE-IS 662
I+ +A++ GV + ++ HT+YD+ K++ N G PLTY++F +L+ ++ E P+E +S
Sbjct: 79 AIKKLAKEAGVEVIVKISHTLYDLDKIIELNGGQPPLTYKRFQTLISRMDPPEMPVEMLS 138
Query: 663 NVLSSHC-KPIDIQSGK 710
L C PI G+
Sbjct: 139 GNLMGRCVTPISEDHGE 155
>UniRef50_Q4T243 Cluster: Chromosome undetermined SCAF10345, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF10345, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 642
Score = 88.6 bits (210), Expect(2) = 1e-23
Identities = 45/86 (52%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD--KVGINRLRFLLQSLED 338
+HWFR LR+HDN AL+ A++ A++ LR +Y LDP VGINR RFLL++LED
Sbjct: 6 VHWFRKGLRLHDNPALQEALSGADS----LRCVYVLDPWFAGAANVGINRWRFLLEALED 61
Query: 339 LDSNLKKLNTCLYVLRGKAVDLLPKL 416
LD +LKKLN+ L+V+RG+ D+ P+L
Sbjct: 62 LDCSLKKLNSRLFVVRGQPTDVFPRL 87
Score = 44.8 bits (101), Expect(2) = 1e-23
Identities = 21/73 (28%), Positives = 43/73 (58%)
Frame = +3
Query: 423 DWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLT 602
+W+V LT + D ++D I +A++ GV R HT+Y++ +++ NN + PLT
Sbjct: 126 EWKVTRLTFEYDPRAYGKERDGAIIKMAQQFGVETIVRNSHTLYNLDRIVEMNNNSPPLT 185
Query: 603 YQKFLSLVKSINV 641
+++F ++V + +
Sbjct: 186 FKRFQTIVSRLEL 198
>UniRef50_Q7ZYX5 Cluster: Cry4 protein; n=13; Euteleostomi|Rep: Cry4
protein - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 579
Score = 111 bits (268), Expect = 2e-23
Identities = 57/164 (34%), Positives = 96/164 (58%), Gaps = 3/164 (1%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD---KVGINRLRFLLQSLE 335
IH FR LR+HDN +L A+ + L P+Y LD +G R RFLLQSLE
Sbjct: 27 IHLFRKGLRLHDNPSLLGALASSST----LYPVYVLDRVFLQGAMHMGALRWRFLLQSLE 82
Query: 336 DLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKK 515
DLD+ L+ + + L+VL G ++L +L W + ++ +++P + + D+ I+ +A++
Sbjct: 83 DLDTRLRAIGSRLFVLCGSTANILRELVAQWGITQISYDTEVEPYYTRMDKDIQTVAQEN 142
Query: 516 GVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKE 647
G+ + HT+YDV ++++ N G+ PLTY+KFL ++ + E
Sbjct: 143 GLQTYTCISHTLYDVKRIVKANGGSPPLTYKKFLHVLSVLGEPE 186
>UniRef50_A7S6B1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 159
Score = 110 bits (264), Expect = 5e-23
Identities = 55/156 (35%), Positives = 89/156 (57%)
Frame = +3
Query: 159 TVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLED 338
T HWFR DLR+HDN AL++A++ A+ ++ L NR +FLLQ L+D
Sbjct: 7 TSCHWFRKDLRLHDNPALKDALDNAD----CFYGVFVLSNFHPSITSGNRWKFLLQCLQD 62
Query: 339 LDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 518
L+++L++L + L +L G V++ PKL +V LT +VD +P Q+D I IA G
Sbjct: 63 LNNSLEELGSKLIILTGSPVEIFPKLLHSLKVTKLTFEVDTEPFAQQRDSVISHIARSAG 122
Query: 519 VFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLV 626
+ + HT+YD+ ++ N +PL + +FL ++
Sbjct: 123 IEVKTHASHTLYDIESLVSHCNENIPLVFDEFLEMI 158
>UniRef50_Q019Z4 Cluster: Cryptochrome-like protein 1; n=4;
Ostreococcus|Rep: Cryptochrome-like protein 1 -
Ostreococcus tauri
Length = 1646
Score = 107 bits (256), Expect = 5e-22
Identities = 64/173 (36%), Positives = 94/173 (54%), Gaps = 3/173 (1%)
Frame = +3
Query: 147 SKTATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLRFL 320
+K T++ WFR LR+HDN AL A +P++ LDP +VG NR+RFL
Sbjct: 1097 AKGRTLV-WFRKALRVHDNPALSRGTLHAT----ACQPVFVLDPWFCQPSRVGANRMRFL 1151
Query: 321 LQSLEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIED 500
LQSL DLD+ L+ + L VL G+ +LP+ W+V +T + DI+P +D +
Sbjct: 1152 LQSLRDLDAQLRARGSSLLVLHGEPRVVLPRACKKWRVDSVTWEHDIEPYAKIRDAAVRG 1211
Query: 501 IAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINV-KEPIE 656
E+ GV + HT+YDV ++L + GA P TYQ F +V + PI+
Sbjct: 1212 ALERAGVECHAASGHTLYDVDEMLEKCKGAPPTTYQGFFKIVDKMGAPNAPID 1264
>UniRef50_Q4PCL9 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 684
Score = 102 bits (244), Expect = 1e-20
Identities = 60/176 (34%), Positives = 100/176 (56%), Gaps = 5/176 (2%)
Frame = +3
Query: 144 MSKTATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLRF 317
MSK V++WFR DLR+HD+ AL+ A+ + + L P++ DPN K +VG+NR RF
Sbjct: 1 MSKHVRVLYWFRTDLRLHDSPALQAAL---DLKPAALFPVWCWDPNYVYKHRVGVNRFRF 57
Query: 318 LLQSLEDLDSNLKKL--NTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEY 491
LL+S+ L N+ N+ L V+RG+ +LLP+L+ W + +L + D ++D+
Sbjct: 58 LLESMIALSKNITSTQSNSQLLVVRGEPTELLPELWKRWSITHLVFEKDPSAYGRRRDQL 117
Query: 492 IEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSI-NVKEPIE 656
I + AEK V + H +YD +V+ +N G ++ +V + +V +PI+
Sbjct: 118 ILEAAEKSNVKVVAVQGHHLYDPEQVVNKNKGKPTMSMSTLQKIVADMGDVPKPID 173
>UniRef50_A4QZX5 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 614
Score = 93.1 bits (221), Expect = 8e-18
Identities = 57/178 (32%), Positives = 97/178 (54%), Gaps = 5/178 (2%)
Frame = +3
Query: 153 TATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLRFLLQ 326
+A VI+WFR DLR+HD+ AL+ A+ + +L PI+ DP+ + + G+NR ++LL
Sbjct: 3 SARVIYWFRTDLRLHDSPALQAAL---DLDPAVLWPIFTWDPHYVYRSRGGLNRWQYLLD 59
Query: 327 SLEDLDSNLKKLN--TCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIED 500
DL +++ LN + L+VLR L PKLF W+V +L + D D Q+DE ++
Sbjct: 60 CQNDLSASITNLNPRSKLFVLREAPQSLFPKLFKAWKVTHLVFEKDTDAYARQRDEVVKK 119
Query: 501 IAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSL-VKSINVKEPIEISNVL 671
A+ GV + R T++D +++ N G ++ + ++ K ++ PI L
Sbjct: 120 AAQAAGVKVITRYGRTLWDSDAIVKANGGEPTMSMARLRTVGAKVGSIPRPIPAPKAL 177
>UniRef50_O77059 Cluster: CG3772-PA; n=15; Coelomata|Rep: CG3772-PA
- Drosophila melanogaster (Fruit fly)
Length = 542
Score = 90.2 bits (214), Expect = 6e-17
Identities = 55/170 (32%), Positives = 90/170 (52%), Gaps = 5/170 (2%)
Frame = +3
Query: 147 SKTATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLRFL 320
++ A VI WFR LR+HDN AL A+ + + L+ P++ D VG NR+RFL
Sbjct: 3 TRGANVI-WFRHGLRLHDNPALLAALADKDQGIALI-PVFIFDGESAGTKNVGYNRMRFL 60
Query: 321 LQSLEDLDSNLKKLNT---CLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEY 491
L SL+D+D L+ L V G+ + +L + ++ + + D +P + ++DE
Sbjct: 61 LDSLQDIDDQLQAATDGRGRLLVFEGEPAYIFRRLHEQVRLHRICIEQDCEPIWNERDES 120
Query: 492 IEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINV 641
I + + + ++V HT++D V+ N G PLTYQ FL V+ I +
Sbjct: 121 IRSLCRELNIDFVEKVSHTLWDPQLVIETNGGIPPLTYQMFLHTVQIIGL 170
>UniRef50_A2R6W6 Cluster: Cofactor: FAD; n=1; Aspergillus niger|Rep:
Cofactor: FAD - Aspergillus niger
Length = 567
Score = 90.2 bits (214), Expect = 6e-17
Identities = 56/164 (34%), Positives = 90/164 (54%), Gaps = 4/164 (2%)
Frame = +3
Query: 159 TVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLRFLLQSL 332
TVI W R DLR+HDN AL+ A++ N + PI+ DP+ + +VG NR RFLL+
Sbjct: 8 TVIFWHRTDLRLHDNPALQAALSL--NPSTFI-PIFTWDPHYAYQVRVGPNRWRFLLECQ 64
Query: 333 EDLDSNLKKLNTC--LYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIA 506
DL + +KLN L+V+R + PKLF W +L + D D ++DE I +A
Sbjct: 65 NDLSQSYRKLNPKQKLWVVREAPQTVFPKLFKAWGATHLVFESDTDGYARERDETIRKLA 124
Query: 507 EKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSIN 638
+ GV + + T++D +V+++N G ++ + ++ IN
Sbjct: 125 NEAGVEVIVKSGRTLFDSDEVVKQNKGEPTMSIHQVEKAIEQIN 168
>UniRef50_A1CJL8 Cluster: DNA photolyase, putative; n=4;
Pezizomycotina|Rep: DNA photolyase, putative -
Aspergillus clavatus
Length = 613
Score = 80.6 bits (190), Expect = 5e-14
Identities = 52/169 (30%), Positives = 89/169 (52%), Gaps = 4/169 (2%)
Frame = +3
Query: 162 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLRFLLQSLE 335
V++W R DLR+HD+ AL A+ A N + PI+ DP+ + +VG NR +FLL+
Sbjct: 5 VLYWHRTDLRLHDSPALHAAL--ALNPSIFI-PIWTWDPHYVYRTRVGPNRWKFLLECQS 61
Query: 336 DLDSNLKKLNTC--LYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAE 509
DL + LN L+V+R +LPKL+ WQ+ +L + D D +DE + +A
Sbjct: 62 DLSAAYTTLNPKQRLWVVREAPQSVLPKLWKKWQITHLVFEQDTDAYARDRDEAVLRMAR 121
Query: 510 KKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIE 656
GV + ++ T++D +++R+N G ++ + + I P +
Sbjct: 122 DAGVEVIVQMGRTLFDPDELVRKNGGKPTMSIAQVQKAAEKIGDGTPAQ 170
>UniRef50_A4M6R0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Petrotoga mobilis SJ95|Rep: Deoxyribodipyrimidine
photo-lyase - Petrotoga mobilis SJ95
Length = 462
Score = 67.3 bits (157), Expect = 5e-10
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 2/164 (1%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDK--VGINRLRFLLQSLED 338
+H FR DLR+ DN +L A+ E ++ F D IKD N ++F++ L++
Sbjct: 19 LHIFRRDLRLEDNTSLIEALQSCE---RVIPAFIFDDRQIKDNDYKSDNAVQFMIACLKE 75
Query: 339 LDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 518
L+ L +LN LY G ++ L ++ + D P ++D I+ I E++
Sbjct: 76 LNDQLHQLNARLYFFEGLTAKVVESLIKTLGIEAVFVNKDYTPFSKKRDNEIKAICERER 135
Query: 519 VFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEP 650
V + +++ +VL++ NG + + FL K I+V+EP
Sbjct: 136 VDFKEHFDVLLHEPTEVLKD-NGMPYIKFTDFLKKSKKIDVREP 178
>UniRef50_A0M4X6 Cluster: Cryptochrome-like DNA photolyase family
protein; n=6; Flavobacteriales|Rep: Cryptochrome-like
DNA photolyase family protein - Gramella forsetii
(strain KT0803)
Length = 438
Score = 67.3 bits (157), Expect = 5e-10
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 10/193 (5%)
Frame = +3
Query: 141 KMSKTATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPN--IKD-----KVG 299
K T T + WFR DLRI D+ AL A N E + IY DP +KD K G
Sbjct: 7 KKQTTNTGLVWFRNDLRISDHEALTTACNSHEK----IIGIYCFDPRHYLKDQFGFIKTG 62
Query: 300 INRLRFLLQSLEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQ 479
R +FL++++E+L NL+ LN L V + K D++P++ ++ VK V E+ Q
Sbjct: 63 KFRSKFLIETIEELQKNLETLNIELLVFQEKPEDIIPEIISEYSVK----SVYFQKEWTQ 118
Query: 480 QDEYIEDIAEK--KGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKF-LSLVKSINVKEP 650
++ +E + + N Q ++ + + +P Y +F S K V+E
Sbjct: 119 EEHDVEKEVRRLVNDIEFNSYYQQFLFHPEDIPFSSFNDIPKVYTEFRKSCEKYSKVREL 178
Query: 651 IEISNVLSSHCKP 689
+ + + L + P
Sbjct: 179 VNLPSPLPARNLP 191
>UniRef50_Q6L055 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Picrophilus torridus|Rep: Deoxyribodipyrimidine
photolyase - Picrophilus torridus
Length = 431
Score = 65.7 bits (153), Expect = 1e-09
Identities = 47/185 (25%), Positives = 88/185 (47%)
Frame = +3
Query: 174 FRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEDLDSNL 353
FR DLR++DN AL ++N ++ P + + + +N F++ SL DL +++
Sbjct: 6 FRRDLRLYDNTALLKSLNNETATIFIMDPAQVKNNEYRSEKALN---FMISSLYDLMTDI 62
Query: 354 KKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFINK 533
+ + L V G VD+L +L + + + D P +++DE I++ + K + N
Sbjct: 63 EGNHGKLAVFHGDPVDVLKRLVNRENINEIYINRDYTPFSIKRDERIKEFSIKNNIKFNA 122
Query: 534 RVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDIQSGKL 713
+ + D LR +G+ + F + INVK+P + + S+ PID +L
Sbjct: 123 LDDYFLSDPE--LRTGSGSFFKNFTAFYNRAMEINVKKP--VYEIKKSNLIPIDGDDMEL 178
Query: 714 *YTQF 728
Y +
Sbjct: 179 KYNNY 183
>UniRef50_Q1RKC7 Cluster: Deoxyribodipyrimidine photo-lyase; n=2;
Rickettsia bellii|Rep: Deoxyribodipyrimidine photo-lyase
- Rickettsia bellii (strain RML369-C)
Length = 475
Score = 65.3 bits (152), Expect = 2e-09
Identities = 52/196 (26%), Positives = 96/196 (48%), Gaps = 3/196 (1%)
Frame = +3
Query: 144 MSKTATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGI---NRLR 314
M+KT+ V W R +LR+HDN + A+ ++ + PI+ D I ++ RL
Sbjct: 1 MNKTSIV--WLRRNLRLHDNKSFAAALRNSDK----ILPIFIFDTTILERFKNPHDRRLS 54
Query: 315 FLLQSLEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYI 494
FL +L ++ LKKL L V GK +D++PKL +++ + D +P +++D+ +
Sbjct: 55 FLANTLCLINDELKKLKGKLLVFYGKPLDIIPKLAATLKIENIYADEDYEPNNIERDKKV 114
Query: 495 EDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLS 674
+++ +N H + +VL ++N A + + K I I + +L+
Sbjct: 115 QELL-GSNCTLNLYCDHLLIKPDRVLTKDNKAYKVYTPYMQAFRKFIADNGSISHNKLLT 173
Query: 675 SHCKPIDIQSGKL*YT 722
++ +D GKL YT
Sbjct: 174 NYSYNLD---GKL-YT 185
>UniRef50_Q11W86 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Bacteroidetes|Rep: Deoxyribodipyrimidine photolyase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 434
Score = 65.3 bits (152), Expect = 2e-09
Identities = 46/137 (33%), Positives = 69/137 (50%), Gaps = 7/137 (5%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLD-------PNIKDKVGINRLRFLL 323
I WF+ DLR+HDN L AI +++ + P+Y LD P K G R +FLL
Sbjct: 5 IVWFKTDLRLHDNETLVRAIEQSDE----IIPVYCLDEDHFKITPFGFQKTGNFRAQFLL 60
Query: 324 QSLEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDI 503
+SL DLD+NL+KL + L V+RGK L K+ ++ + + ++ E Q + +E
Sbjct: 61 ESLNDLDTNLRKLGSGLIVVRGKPETELYKIVKQYEAFKVFAKREVAYEEQQTEARVEKE 120
Query: 504 AEKKGVFINKRVQHTVY 554
K G T+Y
Sbjct: 121 IWKLGCTFESFSTSTLY 137
>UniRef50_A5UYV1 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Roseiflexus sp. RS-1|Rep: Deoxyribodipyrimidine
photo-lyase - Roseiflexus sp. RS-1
Length = 491
Score = 62.5 bits (145), Expect = 1e-08
Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLRFLLQSLED 338
IHWFR DLR+ DN AL A + R + P++ LD I + G+ R+ F++ +L D
Sbjct: 4 IHWFRRDLRLRDNPALSGAAARSGGR---VIPLFILDDAILHAPRTGMARVAFMIAALRD 60
Query: 339 LDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIE 497
LD++L+ + L V RG+ D+L L ++ D P Q+D++IE
Sbjct: 61 LDASLRARGSRLVVRRGRPSDVLRDLVGATGAVGVSWNRDYTPFARQRDQHIE 113
>UniRef50_Q12TR5 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Methanococcoides burtonii DSM 6242|Rep:
Deoxyribodipyrimidine photolyase - Methanococcoides
burtonii (strain DSM 6242)
Length = 467
Score = 62.5 bits (145), Expect = 1e-08
Identities = 39/120 (32%), Positives = 65/120 (54%), Gaps = 4/120 (3%)
Frame = +3
Query: 174 FRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVG----INRLRFLLQSLEDL 341
FR D+R+ DN AL A++ ++ ++ P + LDP + D G N L+FLL+SL DL
Sbjct: 12 FRRDMRVDDNSALLAALDMSD----VVIPCFILDPRLCDPKGKAFNSNALQFLLESLYDL 67
Query: 342 DSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGV 521
L+K+N LY+ G ++ +L ++ ++ + D P +++D I I KGV
Sbjct: 68 KGQLEKVNGRLYLFSGLPEGVIGQLLENLEIDAVFVNHDYTPFSIKRDMQIASICTDKGV 127
>UniRef50_Q116U8 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Trichodesmium erythraeum IMS101|Rep:
Deoxyribodipyrimidine photolyase - Trichodesmium
erythraeum (strain IMS101)
Length = 474
Score = 60.1 bits (139), Expect = 7e-08
Identities = 32/122 (26%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
Frame = +3
Query: 162 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLRFLLQSLE 335
++ W R DLRI DN+ L A E + + I+ LD NI +D + R+ +++ L+
Sbjct: 5 ILFWHRRDLRISDNVGLTQASQEGQT----VVGIFCLDENILKRDDIASARVTYMIGCLQ 60
Query: 336 DLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKK 515
L K++ + L ++ GK ++ +PKL + K + +D++P ++D +++ E
Sbjct: 61 HLQKRYKQIGSQLLIMSGKPIEAIPKLATFLEAKAVYWNLDVEPYSRKRDRQVKENLEAA 120
Query: 516 GV 521
+
Sbjct: 121 NI 122
>UniRef50_Q4KML2 Cluster: Cryptochrome DASH; n=11; cellular
organisms|Rep: Cryptochrome DASH - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 520
Score = 59.3 bits (137), Expect = 1e-07
Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 9/179 (5%)
Frame = +3
Query: 144 MSKTATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD--------KVG 299
MS + TVI R DLR+HDN A AE H++ P+Y DP K G
Sbjct: 1 MSASRTVICLLRNDLRLHDNEVFHWAQRNAE---HII-PLYCFDPRHYQGTYHYNFPKTG 56
Query: 300 INRLRFLLQSLEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDD-WQVKYLTCQVDIDPEFV 476
RLRFLL S++DL + LKK + L V +GK D++ +L V + ++ E
Sbjct: 57 PFRLRFLLDSVKDLRALLKKHGSTLLVRQGKPEDVVCELIKQLGSVSTVAFHEEVASEEK 116
Query: 477 QQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPI 653
+E +++I + V + T+Y + + G +P Y +F V++ P+
Sbjct: 117 SVEEKLKEICCQNKVRVQTFWGSTLYHRDDLPFSHIGGLPDVYTQFRKAVEAQGRVRPV 175
>UniRef50_Q1W7G4 Cluster: DNA photolyase protein; n=22;
Magnoliophyta|Rep: DNA photolyase protein - Solanum
lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 189
Score = 58.8 bits (136), Expect = 2e-07
Identities = 49/188 (26%), Positives = 84/188 (44%), Gaps = 7/188 (3%)
Frame = +3
Query: 171 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIK-------DKVGINRLRFLLQS 329
WFR DLR+HDN +N A N + +Y DP DK G R FL+ S
Sbjct: 1 WFRNDLRVHDN----ECLNAAHNESMSVLAVYCFDPRDYGKSSSGFDKTGPYRASFLIDS 56
Query: 330 LEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAE 509
+ DL NL+ + L V GK +L +L + + ++ + V+ ++ I+ + +
Sbjct: 57 VADLRKNLQARGSDLVVRIGKPETVLVELAKAVGAEAVYAHREVSHDEVKGEDKIDAVMK 116
Query: 510 KKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKP 689
+G+ + T+Y V L +P Y F V+ + V++ IE + L
Sbjct: 117 DEGLEVKYFWGSTLYHVDD-LPFKLEQMPTNYGGFREKVQGLEVRKTIEALDQLRGLPAR 175
Query: 690 IDIQSGKL 713
D++ G++
Sbjct: 176 GDVEPGEI 183
>UniRef50_A6EG08 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Pedobacter sp. BAL39|Rep: Deoxyribodipyrimidine
photolyase - Pedobacter sp. BAL39
Length = 410
Score = 58.4 bits (135), Expect = 2e-07
Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 7/117 (5%)
Frame = +3
Query: 228 EAENRKHLLRPIYFLDPNIKD-------KVGINRLRFLLQSLEDLDSNLKKLNTCLYVLR 386
EA ++ + P+YF DP D K G++R +FLL+S+ L ++ ++L L VL
Sbjct: 4 EAISKSDSILPVYFFDPYYFDPTQFNTVKTGMSRTKFLLESVAALRASFQQLGGDLLVLY 63
Query: 387 GKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYD 557
GK +L+ L D +++ + ++ PE Q +ED+ K + + + HT+Y+
Sbjct: 64 GKPEELMAGLVDQYEISEVYHHREVAPEETQISTKVEDLLWKLKINLRHFIGHTLYN 120
>UniRef50_Q8LB72 Cluster: Blue-light photoreceptor PHR2; n=2;
Arabidopsis thaliana|Rep: Blue-light photoreceptor PHR2
- Arabidopsis thaliana (Mouse-ear cress)
Length = 447
Score = 58.4 bits (135), Expect = 2e-07
Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 7/195 (3%)
Frame = +3
Query: 150 KTATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIK-------DKVGINR 308
+ A V+ WFR DLR+HDN L +A +E + + P+Y DP DK G R
Sbjct: 114 RRAAVV-WFRNDLRVHDNECLNSANDECVS----VLPVYCFDPRDYGKSSSGFDKTGPFR 168
Query: 309 LRFLLQSLEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDE 488
+FL++S+ +L NL+ + L V GK +L +L + + ++ + V+ +
Sbjct: 169 AQFLIESVSELRKNLQARGSNLVVRVGKPEAVLVELAKEIGADAVYAHREVSHDEVKAEG 228
Query: 489 YIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNV 668
IE +++GV + T+Y + L +P Y F V+ + +++ I +
Sbjct: 229 KIETAMKEEGVEVKYFWGSTLYHLDD-LPFKIEDLPSNYGAFKDKVQKLEIRKTIAALDQ 287
Query: 669 LSSHCKPIDIQSGKL 713
L S D++ G +
Sbjct: 288 LKSLPSRGDVELGDI 302
>UniRef50_Q83CE4 Cluster: Deoxyribodipyrimidine photolyase-class I;
n=4; Coxiella burnetii|Rep: Deoxyribodipyrimidine
photolyase-class I - Coxiella burnetii
Length = 472
Score = 58.0 bits (134), Expect = 3e-07
Identities = 37/114 (32%), Positives = 61/114 (53%)
Frame = +3
Query: 159 TVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLED 338
T I WFR DLR+ DN AL + A++ HL+ P+Y LD +K +G + +L SL
Sbjct: 2 TTIFWFRQDLRLSDNPAL---VEAAKSADHLI-PLYILDDQLK-MLGDAQRWWLHHSLSS 56
Query: 339 LDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIED 500
L + L K T L + +G +L +L ++V+ + +P + + D Y+E+
Sbjct: 57 LQTALSKKGTSLILKKGDTKRVLLELIKKYKVEKIYWNRSYEPPYREIDTYLEN 110
>UniRef50_Q6ML17 Cluster: Deoxyribodipyrimidine photolyase-class I;
n=1; Bdellovibrio bacteriovorus|Rep:
Deoxyribodipyrimidine photolyase-class I - Bdellovibrio
bacteriovorus
Length = 435
Score = 57.2 bits (132), Expect = 5e-07
Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Frame = +3
Query: 144 MSKTATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI---KDKVGINRLR 314
MSK + WFR DLR+ DN L +A+ E + + P++ D I D R+
Sbjct: 1 MSKVT--LFWFRRDLRLDDNAGLYHALKE----RSAVLPLFIFDSEILENLDDPADARVT 54
Query: 315 FLLQSLEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYI 494
F+ + ++D+ L + L V GK +++L L D+ V+ + D +P ++DE +
Sbjct: 55 FIYEQIQDMKQQLNAKKSDLIVRHGKPLEVLKTLSDEMAVEAIYANHDYEPAARKRDEKV 114
Query: 495 EDIAEKKGV 521
A K G+
Sbjct: 115 AAWAAKAGI 123
>UniRef50_Q0IDI4 Cluster: Deoxyribodipyrimidine photolyase; n=10;
Synechococcus|Rep: Deoxyribodipyrimidine photolyase -
Synechococcus sp. (strain CC9311)
Length = 492
Score = 56.0 bits (129), Expect = 1e-06
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Frame = +3
Query: 162 VIHWFRLDLRIHDNLALR--NAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLE 335
V+ W R DLR+ DNL L+ AI+ A ++L P P + RL FL++SL
Sbjct: 6 VLFWHRRDLRLADNLGLQAAEAISPAVTGVYVLDPALIQPPESLPPMAPARLWFLVESLR 65
Query: 336 DLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKK 515
+L + + + L V+ G V LLP+L + + D++P ++D + +
Sbjct: 66 ELQQRWRDVGSRLLVVAGDPVQLLPRLASLLEAPAVVWSRDVEPYARERDRQVAKALQAD 125
Query: 516 G 518
G
Sbjct: 126 G 126
>UniRef50_A1ZPZ8 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Microscilla marina ATCC 23134|Rep: Deoxyribodipyrimidine
photolyase - Microscilla marina ATCC 23134
Length = 483
Score = 56.0 bits (129), Expect = 1e-06
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Frame = +3
Query: 150 KTATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD-------KVGINR 308
+T I WFR DLR+HDN L A ++A+ L P+Y DP + K G +R
Sbjct: 11 RTQVKIVWFRNDLRVHDNDVLAKAASDAD----YLLPVYCFDPRQYETTSLGFAKTGAHR 66
Query: 309 LRFLLQSLEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDE 488
+FL+++L +L +NL+ + L + GK +++ L Q K + +I E +
Sbjct: 67 AQFLIETLANLRANLEAKGSGLVIRIGKPEEVIADLAKATQAKAVYASQEIGTEEDATVK 126
Query: 489 YIEDIAEKKGVFI 527
+E K VF+
Sbjct: 127 QLEKRLWKNQVFL 139
>UniRef50_Q86RA1 Cluster: Photolyase related protein; n=1;
Aphrocallistes vastus|Rep: Photolyase related protein -
Aphrocallistes vastus
Length = 563
Score = 55.2 bits (127), Expect = 2e-06
Identities = 52/174 (29%), Positives = 79/174 (45%), Gaps = 3/174 (1%)
Frame = +3
Query: 186 LRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEDLDSNLKKLN 365
LR+ DN AL A+ + ++ + +Y D V R +FL+ LEDL L
Sbjct: 56 LRLKDNTALYQAMAQNPDKFYA---VYIFDGFDSKPVAPVRWQFLIDCLEDLKEQLNGFG 112
Query: 366 TCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFINKRVQH 545
LY RG+ +D+L L W+VK L+ +D D F +E I K IN +
Sbjct: 113 LELYCFRGETIDVLATLVQAWKVKLLSINMDPDVNFTFFNEKI-----VKMCTINAVQLY 167
Query: 546 TVYDVHKVL---RENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDI 698
D H++L + A+P++ + L L ++I K+ N L S K DI
Sbjct: 168 NDMDSHRLLYLPPKYKSAIPMSKFRVL-LAEAITAKQ-----NNLESEAKIQDI 215
>UniRef50_A3J6I6 Cluster: Deoxyribodipyrimidine photolyase; n=4;
Flavobacteriales|Rep: Deoxyribodipyrimidine photolyase -
Flavobacteria bacterium BAL38
Length = 486
Score = 54.0 bits (124), Expect = 5e-06
Identities = 34/130 (26%), Positives = 71/130 (54%), Gaps = 3/130 (2%)
Frame = +3
Query: 171 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINR--LRFLLQSLEDLD 344
WF+ DLR+HD+ AL A+ + + K LL +Y +P++ + ++ F+ QSLE L
Sbjct: 5 WFKRDLRLHDHEALHEAL--STSGKTLL--LYIFEPSLMKDIHYSQRHFDFIKQSLEALQ 60
Query: 345 SNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFV-QQDEYIEDIAEKKGV 521
L+K +T + +++G+AV + KL ++ + + + ++D + + ++KG+
Sbjct: 61 KELQKYHTQILIIQGEAVPVFQKLTQVISIREIYSHQETGIKLTYERDLAVGKLLKEKGI 120
Query: 522 FINKRVQHTV 551
N+ + + V
Sbjct: 121 IWNEYITNGV 130
>UniRef50_Q652J5 Cluster: Deoxyribodipyrimidine photolyase family
protein-like; n=3; Oryza sativa|Rep:
Deoxyribodipyrimidine photolyase family protein-like -
Oryza sativa subsp. japonica (Rice)
Length = 695
Score = 52.8 bits (121), Expect = 1e-05
Identities = 34/103 (33%), Positives = 54/103 (52%)
Frame = +3
Query: 156 ATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLE 335
A + WF+ DLR+ D+ L A+ AE R+ +L P+Y D I D L LL +LE
Sbjct: 44 AAAVVWFKHDLRVDDHPGLAAAV-AAEPRRPVL-PLYVFDRRILDGYSDTMLELLLFALE 101
Query: 336 DLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDID 464
DL LK + L + G A D++ KL ++ Q + + +++
Sbjct: 102 DLKMVLKSQESDLLIGLGNAEDVVLKLVNEVQAGLIFTEEEVE 144
>UniRef50_Q84KJ5 Cluster: Cryptochrome DASH,
chloroplast/mitochondrial precursor; n=8;
Magnoliophyta|Rep: Cryptochrome DASH,
chloroplast/mitochondrial precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 569
Score = 52.8 bits (121), Expect = 1e-05
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 13/123 (10%)
Frame = +3
Query: 141 KMSKTATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD--------KV 296
+ K T++ WFR DLR+ DN AL A + ++ + P+Y LDP + K
Sbjct: 80 RKGKGVTIL-WFRNDLRVLDNDALYKAWSSSDT----ILPVYCLDPRLFHTTHFFNFPKT 134
Query: 297 GINRLRFLLQSLEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYL-----TCQVDI 461
G R FL++ L DL NL K L + GK ++LP L D+ + + TC ++
Sbjct: 135 GALRGGFLMECLVDLRKNLMKRGLNLLIRSGKPEEILPSLAKDFGARTVFAHKETCSEEV 194
Query: 462 DPE 470
D E
Sbjct: 195 DVE 197
>UniRef50_UPI0000E87D35 Cluster: deoxyribodipyrimidine photo-lyase;
n=1; Methylophilales bacterium HTCC2181|Rep:
deoxyribodipyrimidine photo-lyase - Methylophilales
bacterium HTCC2181
Length = 465
Score = 52.4 bits (120), Expect = 1e-05
Identities = 36/135 (26%), Positives = 71/135 (52%), Gaps = 3/135 (2%)
Frame = +3
Query: 171 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGI---NRLRFLLQSLEDL 341
WFR DLR+HDN AL +A+++++N + ++ D NI + + R+ F+ ++L ++
Sbjct: 2 WFRRDLRLHDNHALHHALSQSDN----VYCVFIFDKNILNDLKSKEDQRIEFIWEALSEM 57
Query: 342 DSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGV 521
++L L++ + V+ G + +P L KY D + F +D E A K+ +
Sbjct: 58 KASLNSLSSDITVIHGDPIHAIPLLLK----KY-----DCEALFFNKD--YESYANKRDM 106
Query: 522 FINKRVQHTVYDVHK 566
I + +Q + D ++
Sbjct: 107 RIMEHIQQSSADAYQ 121
>UniRef50_Q2BAD6 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Bacillus sp. NRRL B-14911|Rep: Deoxyribodipyrimidine
photolyase - Bacillus sp. NRRL B-14911
Length = 474
Score = 52.4 bits (120), Expect = 1e-05
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDP-NIKDKVGINRLRFLLQSLEDL 341
I WFR DLRIHD+ L A AE + P+Y +P + + +V ++F + LE L
Sbjct: 3 IVWFRKDLRIHDHRPLAEACASAEE----VIPLYIAEPLSGRKEVSRRHIQFAAEGLEQL 58
Query: 342 DSNLKKLNTCLYVLRGKAVDLLPKL 416
D L+ L L+ +G +D+L +L
Sbjct: 59 DEGLRGLGGRLFAAQGTIIDILEEL 83
>UniRef50_P27526 Cluster: Deoxyribodipyrimidine photo-lyase; n=16;
Pezizomycotina|Rep: Deoxyribodipyrimidine photo-lyase -
Neurospora crassa
Length = 642
Score = 52.0 bits (119), Expect = 2e-05
Identities = 47/169 (27%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Frame = +3
Query: 162 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD---KVGINRLRFLLQSL 332
V+HWF++DLR+HDN +L A +A+ L +Y L P + + I R+ F+L++L
Sbjct: 137 VVHWFKMDLRLHDNRSLWLASQKAKEAGVPLICLYVLSPEDLEAHLRAPI-RVDFMLRTL 195
Query: 333 EDLDSNLKKLNTCLYV----LRGKAVDLLPKLFDDWQVKYLTCQVDID-PEFVQQDEYIE 497
E L ++L+ L L+V R + + +L W +L C ++ + E ++ + ++
Sbjct: 196 EVLKTDLEDLGIPLWVETVEKRKEVPTKIKELMKSWGASHLFCAMEYEVDELRREAKLVK 255
Query: 498 DIAE-KKGVFINKRVQH-TVYDVHKVLRENNGAVPLTYQK-FLSLVKSI 635
+AE +KG + V H T + L+ +G Y F + +K I
Sbjct: 256 LLAEGEKGEKMAADVVHDTCVVMPGALQSGSGGQYAVYSPWFRAWIKHI 304
>UniRef50_Q2S3C6 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Salinibacter ruber DSM 13855|Rep: Deoxyribodipyrimidine
photolyase - Salinibacter ruber (strain DSM 13855)
Length = 483
Score = 51.6 bits (118), Expect = 3e-05
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 7/172 (4%)
Frame = +3
Query: 156 ATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPN-----IKD--KVGINRLR 314
+T + W R DLR+ D+ LR A + + + P+Y DP + D K+ R R
Sbjct: 3 STALVWIRNDLRVRDHAPLRYAADHYDQ----VIPVYCFDPRHFGTTMFDLPKMSSIRAR 58
Query: 315 FLLQSLEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYI 494
FL +S++DL +++ L L V G+ D+LP+L + +I E + +
Sbjct: 59 FLRESVQDLRDSVQDLGADLVVRGGRPEDILPELVRQTGANEVLQFQEIGGEEEDVETAV 118
Query: 495 EDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEP 650
ED G T+Y + V + +P Y F V+ + P
Sbjct: 119 EDALRDTGATPGFFWGKTLYHIDDVPFDGPDDIPKVYTNFRKAVEKKSTVRP 170
>UniRef50_Q98RW5 Cluster: Putative uncharacterized protein orf272;
n=1; Guillardia theta|Rep: Putative uncharacterized
protein orf272 - Guillardia theta (Cryptomonas phi)
Length = 272
Score = 51.6 bits (118), Expect = 3e-05
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 5/151 (3%)
Frame = +3
Query: 147 SKTATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQ 326
S + +I WFR DLRI+DN + + + N + L +Y D N +L FL Q
Sbjct: 62 SYSEKIILWFRYDLRINDNKLIE--LLKTNNNDYYL--VYCFDKNEIKNYSKKKLTFLKQ 117
Query: 327 SLEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIA 506
S+E L NL+KL L ++ G ++ + L + + + ++ + + + E+ E I
Sbjct: 118 SVETLRDNLRKLEYNLMIMEGDSISVFKNLKEKFLITKISYSSRSNKKNDLEKEF-EIIK 176
Query: 507 EKKGV-----FINKRVQHTVYDVHKVLRENN 584
+ K + IN +++ +++ +NN
Sbjct: 177 KLKTIGLNVNLINNKIEFNLHNEFNYFNKNN 207
>UniRef50_Q23DL8 Cluster: FAD binding domain of DNA photolyase
family protein; n=9; cellular organisms|Rep: FAD binding
domain of DNA photolyase family protein - Tetrahymena
thermophila SB210
Length = 486
Score = 51.2 bits (117), Expect = 3e-05
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Frame = +3
Query: 135 KXKMSKTATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGIN--- 305
K K I WFR DLR++DN AL NA+ +++N + P++ D I DK+
Sbjct: 49 KNAKQKRKVSIFWFRRDLRLNDNTALYNAL-KSQNE---VVPLFIFDTEILDKLEDKKDA 104
Query: 306 RLRFLLQSLEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQD 485
R+ F+ + + LK++ + L V G + +L ++ ++ + D + Q+D
Sbjct: 105 RVEFIHLYIMKIQEQLKQVGSTLIVKHGTVDNAFKELVSEFDIQSVYVNRDYESSAKQRD 164
Query: 486 EYIE 497
E I+
Sbjct: 165 ERIK 168
>UniRef50_Q3E438 Cluster: DNA photolyase, FAD-binding:DNA
photolyase, N-terminal; n=4; Chloroflexi (class)|Rep:
DNA photolyase, FAD-binding:DNA photolyase, N-terminal -
Chloroflexus aurantiacus J-10-fl
Length = 534
Score = 50.8 bits (116), Expect = 4e-05
Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 2/170 (1%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDK--VGINRLRFLLQSLED 338
IHWFR DLR+ DN AL A A + P++ D I R +FLL L
Sbjct: 58 IHWFRRDLRLRDNTALMAAATAAGG---AVVPVFIFDDAILRGRFASPARTQFLLDCLAA 114
Query: 339 LDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 518
LD+ L+ L V RG + L + + +T D P V++D I+ + G
Sbjct: 115 LDAELRTFGLHLVVRRGDPLRTLFDVLRESGASGVTWNRDYTPYAVRRDTAIKQALREAG 174
Query: 519 VFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNV 668
+ ++++ +V +G Y + +S EP+ + ++
Sbjct: 175 YEAHSFKDTVIFEMKEVATA-DGRPYTVYTPYAKRWRSRLAAEPVTVQDM 223
>UniRef50_A1SER8 Cluster: Deoxyribodipyrimidine photo-lyase; n=12;
Actinomycetales|Rep: Deoxyribodipyrimidine photo-lyase -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 453
Score = 50.8 bits (116), Expect = 4e-05
Identities = 31/90 (34%), Positives = 47/90 (52%)
Frame = +3
Query: 144 MSKTATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLL 323
M + + WFR DLR+ DN AL A + + P++ LDP + G R +L
Sbjct: 1 MPPSTPAVLWFRRDLRLADNPALVEAAADGP-----VLPLFVLDPVLWGPAGAARRAYLG 55
Query: 324 QSLEDLDSNLKKLNTCLYVLRGKAVDLLPK 413
SL LD++L++ T L V+RG L+P+
Sbjct: 56 ASLRALDASLRERGTRLSVVRGDPARLVPR 85
>UniRef50_Q3VTE5 Cluster: Deoxyribodipyrimidine photolyase; n=3;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
Prosthecochloris aestuarii DSM 271
Length = 477
Score = 50.4 bits (115), Expect = 6e-05
Identities = 39/147 (26%), Positives = 74/147 (50%), Gaps = 2/147 (1%)
Frame = +3
Query: 150 KTATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD--KVGINRLRFLL 323
K TVI WFR DLR+ DN AL A E + P+Y LD + ++G +L
Sbjct: 2 KRKTVICWFRQDLRLEDNPALFVAAEEG-----YVLPVYILDDSSPGTWQMGSATRCWLH 56
Query: 324 QSLEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDI 503
SL L+ + + L + RG+ +++L L + + + +P +++D+ I+
Sbjct: 57 HSLVSLN---RSFDGKLGIFRGEPLEILKTLARQHKAEKIVWNRCYEPWRMKRDQGIKAT 113
Query: 504 AEKKGVFINKRVQHTVYDVHKVLRENN 584
+ +G+ ++ +++ H+VL++NN
Sbjct: 114 LQAEGIEVSSFNGSLLWEPHEVLKQNN 140
>UniRef50_A4A625 Cluster: Deoxyribodipyrimidine photolyase; n=2;
unclassified Gammaproteobacteria|Rep:
Deoxyribodipyrimidine photolyase - Congregibacter
litoralis KT71
Length = 434
Score = 50.4 bits (115), Expect = 6e-05
Identities = 33/90 (36%), Positives = 47/90 (52%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEDLD 344
I+WFR DLR+HDN L A E L P+ N + +G R RF+ +SL+ L
Sbjct: 4 IYWFRNDLRLHDNPGLVEAAKADELLLLYLWPLQRAWCNTQG-LGEQRERFITESLKALQ 62
Query: 345 SNLKKLNTCLYVLRGKAVDLLPKLFDDWQV 434
+L+ L L VL+G ++P L D+ V
Sbjct: 63 DDLQPLGQSLLVLQGSPELVIPDLVRDYGV 92
>UniRef50_Q1VSH4 Cluster: Deoxyribodipyrimidine photolyase-class I;
n=13; Bacteroidetes|Rep: Deoxyribodipyrimidine
photolyase-class I - Psychroflexus torquis ATCC 700755
Length = 457
Score = 50.0 bits (114), Expect = 8e-05
Identities = 32/159 (20%), Positives = 78/159 (49%), Gaps = 3/159 (1%)
Frame = +3
Query: 150 KTATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGIN--RLRFLL 323
K + WFR D+R+ DN+ L +A++ + + P++ D NI +++ + R+ F+
Sbjct: 24 KNKVRVFWFRRDMRLEDNVGLYHALSGVFS----VVPLFIFDKNILNELQEDDARISFIF 79
Query: 324 QSLEDLDSNLK-KLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIED 500
+ L+ + S+L+ + + + +L D++V+ + D +P Q+D I
Sbjct: 80 EQLQKMRSHLQDHYGSSIATYHSTPEEAFHELLKDFEVEAVYTNRDYEPYAHQRDSKINT 139
Query: 501 IAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFL 617
+ +G+ + +++ +V +N+G + L + ++
Sbjct: 140 LLANQGIEFHDFKDQVIFEKTEV-EKNDGGMYLVFTPYM 177
>UniRef50_A4IYV0 Cluster: Deoxyribodipyrimidine photolyase; n=14;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
Francisella tularensis subsp. tularensis (strain
WY96-3418)
Length = 499
Score = 49.6 bits (113), Expect = 1e-04
Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLR--FLLQSLED 338
I WF+ DLR+ DNLAL A + + + P+Y ++ + + ++ + FL + LE+
Sbjct: 3 IVWFKRDLRVTDNLALSLASEKGD-----ILPLYIIELELWQQPDMSHRQYLFLSECLEE 57
Query: 339 LDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVK 437
L++ L KL L ++ G AV++ +L + +K
Sbjct: 58 LNTELTKLGQSLAIMLGDAVEIFEQLIQKYNIK 90
>UniRef50_A1SV39 Cluster: DNA photolyase, FAD-binding-domain
protein; n=1; Psychromonas ingrahamii 37|Rep: DNA
photolyase, FAD-binding-domain protein - Psychromonas
ingrahamii (strain 37)
Length = 448
Score = 49.6 bits (113), Expect = 1e-04
Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 3/174 (1%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAINEAENR--KHLLRPIYFLDPNIKDK-VGINRLRFLLQSLE 335
++W DLRI+DN AL N ++++ +++ F N + K +G R +FL LE
Sbjct: 5 LYWVNKDLRINDNAAL-NLASKSDRLLCVYVVDKQSFEANNFQSKPLGDIRWQFLQGCLE 63
Query: 336 DLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKK 515
D + +L KL ++++ G + L +L + +Q+ T + ++ I + E+
Sbjct: 64 DFNESLSKLGQAMHIVYGDTLSTLMRLCESYQI---TDVITTKLPGTYENRLITQLNERL 120
Query: 516 GVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSS 677
+V K L +P++Y KF + + + EP+ L S
Sbjct: 121 PELTIDQVDQFTLFTKKSLPFELDELPISYSKFRKKMAEVIIPEPVSTVQSLPS 174
>UniRef50_A7D5J0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Halorubrum lacusprofundi ATCC 49239|Rep:
Deoxyribodipyrimidine photo-lyase - Halorubrum
lacusprofundi ATCC 49239
Length = 514
Score = 49.2 bits (112), Expect = 1e-04
Identities = 26/84 (30%), Positives = 42/84 (50%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEDLD 344
+ W R DLR+ DN+ L A ++ + P++ DP++ D R+R LL L L
Sbjct: 3 LFWHRRDLRVADNVGLAAATGTRDDGRGPAAPVFVFDPDVLDHASDVRVRRLLDGLAALR 62
Query: 345 SNLKKLNTCLYVLRGKAVDLLPKL 416
+ + + L V RG +LP+L
Sbjct: 63 DDYRDRGSDLLVARGAPETVLPEL 86
>UniRef50_Q2JW81 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Cyanobacteria|Rep: Deoxyribodipyrimidine photolyase -
Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria
bacteriumYellowstone A-Prime)
Length = 479
Score = 48.8 bits (111), Expect = 2e-04
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 2/125 (1%)
Frame = +3
Query: 153 TATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGI--NRLRFLLQ 326
T+ V+ W R DLR+ DN AL A R + P++ DP + + + R+ FLLQ
Sbjct: 2 TSLVLLWHRRDLRLGDNTALHG----AAQRSPQVVPVFVFDPQLLQRADMAPARVAFLLQ 57
Query: 327 SLEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIA 506
+L++L ++ L RG L +L + + + D+DP QQ+ +
Sbjct: 58 ALQELQERYAQMGIPLLWRRGDPAVELRQLAAELGAQAVFWNEDLDPWARQQESRVRASL 117
Query: 507 EKKGV 521
+ G+
Sbjct: 118 AEAGI 122
>UniRef50_Q55081 Cluster: Deoxyribodipyrimidine photo-lyase; n=15;
Cyanobacteria|Rep: Deoxyribodipyrimidine photo-lyase -
Synechocystis sp. (strain PCC 6803)
Length = 488
Score = 48.8 bits (111), Expect = 2e-04
Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 2/141 (1%)
Frame = +3
Query: 162 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLRFLLQSLE 335
++ W R DLR++D+LAL +A + + ++ LD I + + R+ +LL L+
Sbjct: 19 ILLWHRRDLRLNDHLALA----KARQKTAKIVGVFCLDNKILQAEDMAPARVAYLLGCLQ 74
Query: 336 DLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKK 515
L + ++L + L V + V LLPKL + +T +D +P ++D + ++
Sbjct: 75 SLQDHYQRLGSELLVFQADPVQLLPKLANTLGAHGVTWTLDTEPYAQKRDLAVAQALRER 134
Query: 516 GVFINKRVQHTVYDVHKVLRE 578
G+ I ++ +VL +
Sbjct: 135 GLAIATEWDQLMHHPGEVLTQ 155
>UniRef50_Q15ZK4 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Alteromonadales|Rep: Deoxyribodipyrimidine photolyase -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 445
Score = 48.0 bits (109), Expect = 3e-04
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAINEAENR---KHLLRPIYFLDPNIKD-KVGINRLRFLLQSL 332
I WFR DLR+HDN AL A++E + ++ P +F + + +G R FL QSL
Sbjct: 13 IFWFRHDLRLHDNPAL-VALSEQVDELLCVFIIDPRWFKSSHFQSAHMGDKRWAFLQQSL 71
Query: 333 EDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDW 428
+L +L++ L+VL G+ +++L L +
Sbjct: 72 SELQRHLQEQGQQLFVLEGETLEVLDALIGSY 103
>UniRef50_A0YV59 Cluster: Deoxyribodipyrimidine photolyase; n=4;
Cyanobacteria|Rep: Deoxyribodipyrimidine photolyase -
Lyngbya sp. PCC 8106
Length = 512
Score = 48.0 bits (109), Expect = 3e-04
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLRFLLQSLED 338
I WFR DLR+ DN + + +A + P + +DP + +G R++FL +SL
Sbjct: 3 ILWFRRDLRLIDN----DIVAQAAATDEEILPCFIIDPWFYQQPDIGGMRVQFLFESLAC 58
Query: 339 LDSNLKKLNTCLYVLRGKAVDLLPKL 416
LD +L+ L + LY+ G +V+++ L
Sbjct: 59 LDGSLRDLGSRLYLFEGNSVEVIQTL 84
>UniRef50_Q2FRR1 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Methanospirillum hungatei JF-1|Rep:
Deoxyribodipyrimidine photolyase - Methanospirillum
hungatei (strain JF-1 / DSM 864)
Length = 448
Score = 48.0 bits (109), Expect = 3e-04
Identities = 25/92 (27%), Positives = 49/92 (53%)
Frame = +3
Query: 150 KTATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQS 329
K + +++W + +R N AL AI + K L ++ LD + + ++ RFL +
Sbjct: 16 KGSYILYWMQSAVRTRYNHALEYAIERSNELKKPLIVVFCLDHSYPEATPVH-YRFLWEG 74
Query: 330 LEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDD 425
L+D++ +L + +L G VD++P++ DD
Sbjct: 75 LQDVNRSLTERGIGFQILSGSPVDIIPRIADD 106
>UniRef50_Q46H89 Cluster: Deoxyribodipyrimidine photolyase; n=7;
Prochlorococcus marinus|Rep: Deoxyribodipyrimidine
photolyase - Prochlorococcus marinus (strain NATL2A)
Length = 493
Score = 47.6 bits (108), Expect = 4e-04
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD---KVGINRLRFLLQSLE 335
I W R DLR DN+ L A ++N K L+ +Y LDP + D + FL +SL
Sbjct: 7 IFWHRRDLRFGDNIGLFEA---SKNSKSLI-GVYVLDPKLLDLNRTTSEAKNWFLGESLI 62
Query: 336 DLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKK 515
+L N + + L +L G ++L+ KL + + + +I+P + +D+ I + K+
Sbjct: 63 ELQKNWEIRGSRLLILNGDPIELISKLAELVHAECIYWNENIEPYEINRDKQIAEKLSKE 122
>UniRef50_Q0BXN5 Cluster: Deoxyribodipyrimidine photolyase family
protein; n=2; Rhodobacterales|Rep: Deoxyribodipyrimidine
photolyase family protein - Hyphomonas neptunium (strain
ATCC 15444)
Length = 536
Score = 47.6 bits (108), Expect = 4e-04
Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 3/138 (2%)
Frame = +3
Query: 147 SKTATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPN--IKDKVGINRLRFL 320
S + + WF+ DLR+HD+ AL A+ + P+Y +P + + F+
Sbjct: 6 SMSGVHVIWFKRDLRVHDHAALAAAVASGAP----ILPLYIFEPGYWALPEHSRRQFDFV 61
Query: 321 LQSLEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFV-QQDEYIE 497
SLE+LD+ LK T L + G A+D+ L + + + ++ +D +
Sbjct: 62 RDSLEELDAALKARGTKLVIRMGSAIDVFSALHQKHGIAAIHAHEETGLQWTFDRDRAVR 121
Query: 498 DIAEKKGVFINKRVQHTV 551
A G+ + ++ Q+ V
Sbjct: 122 RWARNAGISLREQPQNGV 139
>UniRef50_A7P504 Cluster: Chromosome chr4 scaffold_6, whole genome
shotgun sequence; n=4; Magnoliophyta|Rep: Chromosome
chr4 scaffold_6, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 564
Score = 47.6 bits (108), Expect = 4e-04
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Frame = +3
Query: 141 KMSKTATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD--------KV 296
K + + I WFR DLR+ DN AL A ++ + P+Y +DP + K
Sbjct: 83 KRNGSGVAIVWFRNDLRVLDNEALVKAWASSQ----AVLPVYCVDPRLFGTTHYFGFPKT 138
Query: 297 GINRLRFLLQSLEDLDSNLKKLNTCLYVLRGKAVDLLPKL 416
G R +FL++ L DL NL L + GK ++LP L
Sbjct: 139 GALRAQFLIECLADLKRNLMNRGLNLLIQHGKPEEILPSL 178
>UniRef50_A0Y3K3 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Alteromonadales bacterium TW-7|Rep:
Deoxyribodipyrimidine photolyase - Alteromonadales
bacterium TW-7
Length = 436
Score = 46.8 bits (106), Expect = 7e-04
Identities = 45/183 (24%), Positives = 88/183 (48%), Gaps = 4/183 (2%)
Frame = +3
Query: 162 VIHWFRLDLRIHDN-LALRNAINE-AENRKHLLRPIYFLDPNIKDK-VGINRLRFLLQSL 332
+++W + DLR++DN + + A+ + A + ++ P +F + N + K G N+ FL+QSL
Sbjct: 5 ILYWLKNDLRLNDNPIFSKLALQQCALDVVFVINPNWFKNTNYQQKQYGENKYTFLMQSL 64
Query: 333 EDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEK 512
+L L L+VL G+ V +L + + + + +Q E A
Sbjct: 65 YELQQALIARGQTLHVLEGEPVSVLKQRIKEQHIDEVVYSEQFG--VYEQREINLLKAHC 122
Query: 513 KGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHC-KP 689
+ +Q T+Y ++ L N +P ++ F V++ N+ PI +S++ + KP
Sbjct: 123 PQIQFTGTLQDTLYQQNE-LPFNLTDLPKSFTPFKKKVEAANI--PITLSHITTELLPKP 179
Query: 690 IDI 698
I +
Sbjct: 180 ITL 182
>UniRef50_UPI0000F1E94A Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 487
Score = 46.4 bits (105), Expect = 0.001
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLR 314
IHWFR LR+HDN AL+ A+ A+ +R +YFLDP +G+NR R
Sbjct: 430 IHWFRKGLRLHDNPALQEAVRGADT----VRCVYFLDPWFAGSSNLGVNRWR 477
>UniRef50_Q95UQ7 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Branchiostoma belcheri|Rep: Deoxyribodipyrimidine
photo-lyase - Branchiostoma belcheri (Amphioxus)
Length = 202
Score = 46.4 bits (105), Expect = 0.001
Identities = 26/83 (31%), Positives = 43/83 (51%)
Frame = +3
Query: 162 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEDL 341
+++W D R+ DN AL A A + L + L P + I F+L+ LE++
Sbjct: 121 IVYWMSRDQRVQDNWALLYAQQLAMKHQVPLYVCFCLVPKFLE-ASIRHYGFMLKGLEEV 179
Query: 342 DSNLKKLNTCLYVLRGKAVDLLP 410
+ L+ L+ ++L G AVD+LP
Sbjct: 180 ERELQSLDISFHLLTGYAVDVLP 202
>UniRef50_A5GQG9 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Synechococcus sp. RCC307|Rep: Deoxyribodipyrimidine
photolyase - Synechococcus sp. (strain RCC307)
Length = 467
Score = 45.6 bits (103), Expect = 0.002
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 2/121 (1%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALR--NAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLED 338
+ W R DLR+ DNL L +AI +L P P + R FLL+SL +
Sbjct: 5 LFWHRRDLRLADNLGLAAVSAITPEVMGVFVLDPAELEHPTMAPA----RRWFLLESLRE 60
Query: 339 LDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 518
L ++ + L +L G V+LLP+L + D++P Q+D + + G
Sbjct: 61 LQQRWRQAGSQLLLLEGNPVELLPRLAQQLGAAGVAWNRDVEPLVRQRDRELAAALKAIG 120
Query: 519 V 521
V
Sbjct: 121 V 121
>UniRef50_A3JAL3 Cluster: Deoxyribodipyrimidine photolyase; n=4;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
Marinobacter sp. ELB17
Length = 441
Score = 45.6 bits (103), Expect = 0.002
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAI-NEAENRKHLLRPIYFLDPNIKDK-VGINRLRFLLQSLED 338
++WF DLR+HDN AL A ++ +++ P +F ++ K +G +R RFL QSL
Sbjct: 4 LYWFTRDLRLHDNAALLAASKSDMLLCVYVVEPRWFKPGPLQCKTMGHHRWRFLWQSLIG 63
Query: 339 LDSNLKKLNTCLYVLRGKAVDLLPKL 416
L+ +L+ L L++ G ++P L
Sbjct: 64 LERSLRALGQRLHIAWGDPETVIPAL 89
>UniRef50_A6GLE5 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Limnobacter sp. MED105|Rep: Deoxyribodipyrimidine
photolyase - Limnobacter sp. MED105
Length = 453
Score = 45.2 bits (102), Expect = 0.002
Identities = 33/131 (25%), Positives = 64/131 (48%), Gaps = 4/131 (3%)
Frame = +3
Query: 171 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPN--IKDKVGINRLRFLLQSLEDLD 344
WF+ DLR+ D++ L A+ A++ L+ P+Y +P+ + F+ + L+DL
Sbjct: 5 WFKRDLRLSDHMPLFEAMRNAKHH-GLVLPLYIHEPSQILDAHTARQHQLFVHECLDDLQ 63
Query: 345 SNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFV--QQDEYIEDIAEKKG 518
K+ L+ G+AVD+L L ++ +L + +F Q+D + + +G
Sbjct: 64 QQFAKVGGYLHEELGEAVDVLAALHAQFKFTHLWAHQE-TTQFAQYQRDRAVAAWCKSEG 122
Query: 519 VFINKRVQHTV 551
V ++ Q+ V
Sbjct: 123 VVFHELPQNNV 133
>UniRef50_Q4FL16 Cluster: Deoxyribodipyrimidine photolyase; n=4;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
Pelagibacter ubique
Length = 473
Score = 44.8 bits (101), Expect = 0.003
Identities = 38/123 (30%), Positives = 59/123 (47%)
Frame = +3
Query: 153 TATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSL 332
T I W R D RI N AL A +N +++ IY +P DK + +L +SL
Sbjct: 2 TKKAIVWIREDFRIEYNEALATA---TQNHEYV-SAIYIYNPKNFDKKREAQKWWLSKSL 57
Query: 333 EDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEK 512
E+L +LKKLN L V G +++L L V +V +P+ + + + I D+ K
Sbjct: 58 ENLSIDLKKLNITLEVQLGDELEVLSILKKKDDVTVYWSKV-YEPDVINKGKKIRDLFIK 116
Query: 513 KGV 521
+
Sbjct: 117 NEI 119
>UniRef50_A2BUZ7 Cluster: Putative deoxyribodipyrimidine photolyase;
n=3; Prochlorococcus marinus|Rep: Putative
deoxyribodipyrimidine photolyase - Prochlorococcus
marinus (strain MIT 9515)
Length = 503
Score = 44.8 bits (101), Expect = 0.003
Identities = 33/133 (24%), Positives = 70/133 (52%), Gaps = 3/133 (2%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI-KDKVGINR-LRFLLQSLED 338
I WF+ DLRI+DN AL ++ + + + PI+ ++ I K +R +F +SL D
Sbjct: 6 ILWFKKDLRINDNEALIESLKDRD-----IIPIFIIEKEIWSQKTYSDRQWQFCKESLLD 60
Query: 339 LDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYL-TCQVDIDPEFVQQDEYIEDIAEKK 515
L +L + L + GK +++ ++ +++++K + + Q D ++D+ + A K
Sbjct: 61 LRISLANIGQPLIIRTGKVIEIFDQISNNFEIKAIYSHQETGDYLTYKRDQEVRKWASMK 120
Query: 516 GVFINKRVQHTVY 554
+ + +Q +V+
Sbjct: 121 KIIWKEYLQFSVF 133
>UniRef50_A1U5B0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Marinobacter aquaeolei VT8|Rep: Deoxyribodipyrimidine
photo-lyase - Marinobacter aquaeolei (strain ATCC 700491
/ DSM 11845 / VT8)(Marinobacter hydrocarbonoclasticus
(strain DSM 11845))
Length = 505
Score = 44.8 bits (101), Expect = 0.003
Identities = 28/114 (24%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Frame = +3
Query: 162 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINR--LRFLLQSLE 335
V+ WF+ DLR+ D+ L A+ + + P+Y ++P + +R +F+ +SLE
Sbjct: 3 VVVWFKRDLRVEDHGPLYAAVQSGQP----VVPLYVVEPEYWQQPDTSRRQWQFVAESLE 58
Query: 336 DLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFV-QQDEYI 494
L LK+L + L + G+ + L L + + + C + ++ Q+D+ +
Sbjct: 59 SLRKQLKRLGSDLLIAHGEVIRTLDDLKQQYGITQVFCHQETGGDWTFQRDKAV 112
>UniRef50_A0LR66 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Acidothermus cellulolyticus 11B|Rep:
Deoxyribodipyrimidine photo-lyase - Acidothermus
cellulolyticus (strain ATCC 43068 / 11B)
Length = 497
Score = 44.4 bits (100), Expect = 0.004
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +3
Query: 162 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEDL 341
+++WFR DLR+ D+ AL A A + P++ +DP G NR +FL LE+L
Sbjct: 33 IVYWFRRDLRLADSPALVAAARAAGAEP--IVPLFVVDPRAGRGAGPNRWQFLASCLEEL 90
Query: 342 DSNL 353
D L
Sbjct: 91 DRQL 94
>UniRef50_Q9SB34 Cluster: Putative uncharacterized protein
F24A6.130; n=1; Arabidopsis thaliana|Rep: Putative
uncharacterized protein F24A6.130 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 581
Score = 44.4 bits (100), Expect = 0.004
Identities = 26/103 (25%), Positives = 52/103 (50%)
Frame = +3
Query: 156 ATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLE 335
+T + WF+ DLR+ D+ L A ++ + P+Y LD I + + L + +LE
Sbjct: 35 STAVVWFKHDLRVDDHPGLL-----AASKHRAVIPLYVLDRRILSRYTTDTLELAIIALE 89
Query: 336 DLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDID 464
DL LKK + L + G A +++ L + + ++ + +++
Sbjct: 90 DLRKTLKKQGSNLMLRYGNAENVIEDLVKEVRAPFVFVEEEVE 132
>UniRef50_A3ETQ4 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
Leptospirillum sp. Group II UBA
Length = 536
Score = 44.0 bits (99), Expect = 0.005
Identities = 35/102 (34%), Positives = 49/102 (48%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEDLD 344
I WFR +LR+ DN LR EA R LL P++ +P+ R + +SL LD
Sbjct: 65 IVWFRNNLRLSDNPPLR----EAAERGPLL-PVFIGEPSRGASPEGARHWWRARSLRCLD 119
Query: 345 SNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPE 470
+L +L L LRG LLP L ++ + IDP+
Sbjct: 120 HSLSRLGAPLLFLRGDPAILLPDLATRLKIDKILAMEAIDPD 161
>UniRef50_P12769 Cluster: Deoxyribodipyrimidine photo-lyase; n=5;
cellular organisms|Rep: Deoxyribodipyrimidine
photo-lyase - Methanobacterium thermoautotrophicum
Length = 445
Score = 44.0 bits (99), Expect = 0.005
Identities = 28/88 (31%), Positives = 43/88 (48%)
Frame = +3
Query: 162 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEDL 341
V++W + +R H N AL AI A + K L ++ L + + RFL++ L D+
Sbjct: 22 VVYWMQASVRSHWNHALEYAIETANSLKKPLIVVFGLTDDFPN-ANSRHYRFLIEGLRDV 80
Query: 342 DSNLKKLNTCLYVLRGKAVDLLPKLFDD 425
SNL++ L V R +L K DD
Sbjct: 81 RSNLRERGIQLVVERDSPPSVLLKYADD 108
>UniRef50_Q5FS98 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Gluconobacter oxydans|Rep: Deoxyribodipyrimidine
photolyase - Gluconobacter oxydans (Gluconobacter
suboxydans)
Length = 479
Score = 43.6 bits (98), Expect = 0.007
Identities = 50/188 (26%), Positives = 76/188 (40%), Gaps = 2/188 (1%)
Frame = +3
Query: 147 SKTATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLD--PNIKDKVGINRLRFL 320
S+ I WFR DLR+ D+ AL +EA L +Y LD +G +L
Sbjct: 4 SQNRPAIVWFRDDLRMADHPAL----HEAAASGWPLICLYILDDVTPALHPLGAAARWWL 59
Query: 321 LQSLEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIED 500
+L DL NL+K L L G A LLP+L + + QD I
Sbjct: 60 RGALADLRRNLEKQGGTLLTLSGSAEKLLPQLAKQTDAASVHWHHRLHERERAQDNRIRR 119
Query: 501 IAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSH 680
E++ ++ + + D V + G + F +++ V EP+E + LS H
Sbjct: 120 TLEEQECEVHAQWGTVLVDPDTVQTKQGGFYKVC-GSFWKALQTHAVPEPLEAPSRLSFH 178
Query: 681 CKPIDIQS 704
P + S
Sbjct: 179 AIPASVLS 186
>UniRef50_Q087D0 Cluster: Deoxyribodipyrimidine photo-lyase; n=3;
Alteromonadales|Rep: Deoxyribodipyrimidine photo-lyase -
Shewanella frigidimarina (strain NCIMB 400)
Length = 504
Score = 43.6 bits (98), Expect = 0.007
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Frame = +3
Query: 150 KTATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRL--RFLL 323
K A I WF+ DLR+ D+ L +A N + LL IY +P + N RF+
Sbjct: 6 KQAINIVWFKRDLRLSDHQPLVDAFNH--DLPCLL--IYTFEPFMLADSHYNERHWRFVW 61
Query: 324 QSLEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDI 461
QSL+D++ L + N +Y+ +DLL ++ +++K + +I
Sbjct: 62 QSLQDMNQQLLRFNGQVYMFSMPMIDLLDEISQTFEIKNIYSHQEI 107
>UniRef50_Q6CSJ7 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome D of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 595
Score = 43.6 bits (98), Expect = 0.007
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +3
Query: 162 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPN--IKDKVGINRLRFLLQSLE 335
VIHWFR DLR+ DN L A+N++++ + +Y ++ + I +L+F L +L
Sbjct: 72 VIHWFRGDLRVRDNTGLAYALNQSKSGS--VEALYVINEHDWIAHMESGWKLKFQLDALR 129
Query: 336 DLDSNLKKLNTCLYV 380
L L KL L+V
Sbjct: 130 SLSRELAKLGVRLHV 144
>UniRef50_Q5IFN2 Cluster: Cryptochrome DASH,
chloroplast/mitochondrial precursor; n=5; Eukaryota|Rep:
Cryptochrome DASH, chloroplast/mitochondrial precursor -
Ostreococcus tauri
Length = 546
Score = 43.6 bits (98), Expect = 0.007
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Frame = +3
Query: 144 MSKTATVIHWFRLDLRIHDNLALRNAINEAENRKHL-LRPIYFLD-----PNIKD--KVG 299
M +T VI WFR DLR+ DN + A A + + P+Y D P+ + + G
Sbjct: 1 MGRTRVVI-WFRNDLRLLDNACVARAATLASESSDVEVVPVYVFDETYFKPSKRGLARFG 59
Query: 300 INRLRFLLQSLEDLDSNLKKLNTCLYVLRGKAVDLLPKL 416
R +F L+ + DL ++L+ L + L V GK+ D++ +L
Sbjct: 60 AGRGKFTLECVGDLKTSLRALGSDLLVRCGKSRDVIAEL 98
>UniRef50_Q1N8J8 Cluster: Deoxyribodipyrimidine photolyase; n=5;
Sphingomonadales|Rep: Deoxyribodipyrimidine photolyase -
Sphingomonas sp. SKA58
Length = 458
Score = 43.2 bits (97), Expect = 0.009
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +3
Query: 153 TATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDK--VGINRLRFLLQ 326
TA V+ WFR DLR+ D AL A +E + P+Y LD + + +G +L
Sbjct: 2 TAPVLLWFRQDLRLSDQAALIAAASEGP-----VVPVYVLDDDTPRQWVMGGASRWWLHH 56
Query: 327 SLEDLDSNLKKLNTCLYVLRGKAVDLLPKL 416
SL LD L++ + L + RGK+ D+L L
Sbjct: 57 SLASLDRALREKGSRLTLRRGKSADVLQAL 86
>UniRef50_A4GI46 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
uncultured marine bacterium EB0_41B09
Length = 424
Score = 43.2 bits (97), Expect = 0.009
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 13/148 (8%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLD-PNIKD------KVGINRLRFLL 323
I+WFR DLR+ DNL+L AI ++ + +Y D + KD ++G +R +L
Sbjct: 4 IYWFRNDLRVIDNLSLNEAIESSDE----ILFVYMQDVQSFKDTEWGFSRMGPHRKLYLS 59
Query: 324 QSLEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQ-VDIDPEFVQQDE---Y 491
Q L L L L VD L KL + + + + C+ +D E Q+ +
Sbjct: 60 QGLNALQEKLSNYGHSLNYYLDDTVDGLLKLVEKFHIDRIYCESIDSHEELDQEIRLRGH 119
Query: 492 IEDIAE--KKGVFINKRVQHTVYDVHKV 569
D+ + G+F+N ++ + D+ V
Sbjct: 120 KVDLYSYYQSGLFLNDQIPFNLNDLPDV 147
>UniRef50_Q5V438 Cluster: Photolyase/cryptochrome; n=3;
Halobacteriaceae|Rep: Photolyase/cryptochrome -
Haloarcula marismortui (Halobacterium marismortui)
Length = 464
Score = 43.2 bits (97), Expect = 0.009
Identities = 27/88 (30%), Positives = 43/88 (48%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEDLD 344
+ W + DLRI DN L A + E + P+Y LD ++ +G + FLL + L
Sbjct: 11 VFWHQRDLRIPDNRGLTAAAADDE-----VLPVYVLDTDLLANIGKRQKAFLLAGVRALK 65
Query: 345 SNLKKLNTCLYVLRGKAVDLLPKLFDDW 428
+ L V +G AVD+L + D++
Sbjct: 66 QAYRDHGGELLVKKGTAVDVLSNVVDEY 93
>UniRef50_Q6HWS5 Cluster: Deoxyribodipyrimidine photolyase family
protein; n=8; Bacillus cereus group|Rep:
Deoxyribodipyrimidine photolyase family protein -
Bacillus anthracis
Length = 476
Score = 42.7 bits (96), Expect = 0.012
Identities = 33/184 (17%), Positives = 81/184 (44%)
Frame = +3
Query: 162 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEDL 341
+I F+ D R++DN AL A E + P+Y D +G +L ++ D+
Sbjct: 5 IIVMFQKDFRLYDNPALFEAAQSGE-----VVPVYVHDETFS--MGSASKWWLHHAIIDV 57
Query: 342 DSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGV 521
L+ L + L + +G + + L + + + + DP+ +Q ++ ++ + E KG+
Sbjct: 58 KKQLEALGSTLIIRKGSTQEEILSLVEQLGITAVYWNICYDPDRLQSNQKMKMMLEHKGM 117
Query: 522 FINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKPIDIQ 701
+ H + + + +++N + + + K + K ++ ++ + P+ +
Sbjct: 118 ICKEFNSHLLLEPWVIKKKDNTEYKVFTPFYNAFQKQVIHKPISKVQSIKGGNSLPVSLS 177
Query: 702 SGKL 713
+L
Sbjct: 178 VSEL 181
>UniRef50_Q4P1D4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 655
Score = 42.7 bits (96), Expect = 0.012
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 16/136 (11%)
Frame = +3
Query: 162 VIHWFRL-DLRIHDNLALRNAINEAENRK------HLLRPIYFLDP---NIKDKVGINRL 311
V++W R+ DLRIHDN AL +A + A R+ HL+ ++ + P + D+ G R+
Sbjct: 124 VVYWMRMHDLRIHDNRALAHASSLAAARRKNGKGGHLI-ALFVITPADYSAHDR-GARRI 181
Query: 312 RFLLQSLEDLDSNLKKLNTCLYVL------RGKAVDLLPKLFDDWQVKYLTCQVDIDPEF 473
F+L++L L S KL+ V R + + + L + LT ++ + +
Sbjct: 182 DFVLRTLASLKSQFDKLDIPFVVYTYSGEDRAQVGEKVFSLCEQCDASQLTANIEYEVDE 241
Query: 474 VQQDEYIEDIAEKKGV 521
+ +D + + +KKGV
Sbjct: 242 LWRDLAMLEAKDKKGV 257
>UniRef50_Q6NKC0 Cluster: Putative riboflavin biosynthesis protein;
n=1; Corynebacterium diphtheriae|Rep: Putative
riboflavin biosynthesis protein - Corynebacterium
diphtheriae
Length = 446
Score = 42.3 bits (95), Expect = 0.016
Identities = 32/103 (31%), Positives = 44/103 (42%)
Frame = +3
Query: 159 TVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLED 338
+V+ WFR DLR+HDN AL A L +Y + +G +L SL
Sbjct: 4 SVVVWFRDDLRVHDNPALMKAWELVRANPADLHAVYIANEVGVRPLGGAVKWWLHHSLLA 63
Query: 339 LDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDP 467
L L + L+VL G + LLP+L +T DP
Sbjct: 64 LSEQLAQRGVRLHVLSGDPLTLLPQLVTSCGATAVTMNRRYDP 106
>UniRef50_Q5UUY8 Cluster: Class-II photolyase; n=1; Antonospora
locustae|Rep: Class-II photolyase - Antonospora locustae
(Nosema locustae)
Length = 528
Score = 42.3 bits (95), Expect = 0.016
Identities = 25/91 (27%), Positives = 43/91 (47%)
Frame = +3
Query: 162 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEDL 341
V++W D R+ DN AL A A L + L P D + RF+L L ++
Sbjct: 97 VVYWMSRDQRVQDNWALLCAQGIAVRHGLPLFICFCLVPRFLDAT-TRQFRFMLAGLREV 155
Query: 342 DSNLKKLNTCLYVLRGKAVDLLPKLFDDWQV 434
++ +L +VL+G A + LP+ + ++
Sbjct: 156 ETEALQLGIAFHVLKGSAPEALPRFVEHHKI 186
>UniRef50_Q47SJ5 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Thermobifida fusca YX|Rep: Deoxyribodipyrimidine
photolyase - Thermobifida fusca (strain YX)
Length = 419
Score = 41.9 bits (94), Expect = 0.021
Identities = 28/124 (22%), Positives = 58/124 (46%)
Frame = +3
Query: 156 ATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLE 335
+T + F DLR+ D+ AL A+ EA+ + P++ +DP + NR+ +LL++L
Sbjct: 2 STTVVLFTRDLRVSDHPALHAAVTEADR----VVPLFVVDPALVRVSARNRIAYLLEALA 57
Query: 336 DLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKK 515
+L L++ L V +G V ++ + + + D+ V++ + +
Sbjct: 58 ELRGLLRERGGELVVRQGDTVAETVRIVAEAGAQAVYLSADVSAAAVRRARQLTEAVRAA 117
Query: 516 GVFI 527
G +
Sbjct: 118 GAHV 121
>UniRef50_A1SV40 Cluster: Deoxyribodipyrimidine photo-lyase; n=9;
Gammaproteobacteria|Rep: Deoxyribodipyrimidine
photo-lyase - Psychromonas ingrahamii (strain 37)
Length = 517
Score = 41.5 bits (93), Expect = 0.027
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAINEAENRKH-LLRPIYFLDPNIKDKVGINRLRFLLQSLEDL 341
I W + DLR+ D+ L +I + + P+ DP+ DK RF+ QS+ED+
Sbjct: 18 IVWLKRDLRLSDHQPLSESIQSGLTLLYYVFEPLLIADPHY-DK---RHWRFIWQSIEDI 73
Query: 342 DSNLKKLNTCLYVLRGKAV 398
++ L N +YV G AV
Sbjct: 74 NTQLSAFNAQIYVYFGDAV 92
>UniRef50_UPI0000E0FEEE Cluster: Deoxyribodipyrimidine photolyase;
n=1; alpha proteobacterium HTCC2255|Rep:
Deoxyribodipyrimidine photolyase - alpha proteobacterium
HTCC2255
Length = 441
Score = 41.1 bits (92), Expect = 0.036
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDK----------VGINRLR 314
++WF DLR+ DNL L+ I + + + H + D + K +G +R R
Sbjct: 5 LYWFEHDLRLADNLPLQQTIAQID-QLHCIYIFNAADFSTTKKKGAGQFNQRHMGQHRYR 63
Query: 315 FLLQSLEDLDSNLKKLNTCLYVLRGKAVDLLPKL 416
F+ Q+L+DL S L L++ G+ +D++ +L
Sbjct: 64 FIRQALDDLQSQLHTFGQQLHIYYGEPLDIIEQL 97
>UniRef50_Q1VSH5 Cluster: Putative deoxyribodipyrimidine photolyase;
n=1; Psychroflexus torquis ATCC 700755|Rep: Putative
deoxyribodipyrimidine photolyase - Psychroflexus torquis
ATCC 700755
Length = 485
Score = 40.7 bits (91), Expect = 0.047
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = +3
Query: 171 WFRLDLRIHDNLALRNAINEAEN--RKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEDLD 344
WF+ DLR+ D+ L A+ + + ++ PI D + ++ RF+ +SL D+
Sbjct: 6 WFKRDLRLQDHAPLHLALQKKQPVLLLYIFEPILLKDSHYSER----HFRFIKESLRDIQ 61
Query: 345 SNLKKLNTCLYVLRGKAVDLLPKLFDDWQVK 437
L+ +T + ++ G A D+ + +K
Sbjct: 62 KQLEAYHTQVLIVEGNAEDVFKTIHQQLTIK 92
>UniRef50_Q1MZD6 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Oceanobacter sp. RED65|Rep: Deoxyribodipyrimidine
photolyase - Oceanobacter sp. RED65
Length = 478
Score = 40.7 bits (91), Expect = 0.047
Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 6/123 (4%)
Frame = +3
Query: 171 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD--KVGINRLRFLLQSLEDLD 344
WFR DLR+HDN AL +A+ + Y L D +V + + + Q LEDL
Sbjct: 8 WFRRDLRVHDNPALFHAMKNGQ-----CIAFYCLAQKQWDEHQVSLRQRSLIRQQLEDLT 62
Query: 345 SNLKKLNTCLYVLRGKAVDLLPKLF----DDWQVKYLTCQVDIDPEFVQQDEYIEDIAEK 512
+L L L V+ +PK F + V+ L C + + V + + + ++
Sbjct: 63 QSLAALGVPLIVIDTADFKSIPKTFVSVLQQYNVEQLFCNAEYEVNEVALTKNVTEALQQ 122
Query: 513 KGV 521
+ +
Sbjct: 123 QDI 125
>UniRef50_Q4KT08 Cluster: DNA photolyase 2; n=2; Baculoviridae|Rep:
DNA photolyase 2 - Chrysodeixis chalcites
nucleopolyhedrovirus
Length = 489
Score = 40.3 bits (90), Expect = 0.063
Identities = 28/101 (27%), Positives = 49/101 (48%)
Frame = +3
Query: 162 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEDL 341
V++W D R+ DN AL A A K L ++ + + + + + FL++ LE++
Sbjct: 49 VVYWMSRDSRVQDNWALIYAQELAHTAKLPLYVVFCMTKSF-NNASMRQFHFLIKGLEEV 107
Query: 342 DSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDID 464
+KL+ +L G A DL + +DW ++ C V D
Sbjct: 108 RVECQKLDITFVMLDGSA-DL---VLNDWVREHDICAVVCD 144
>UniRef50_Q2SQU0 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Hahella chejuensis KCTC 2396|Rep: Deoxyribodipyrimidine
photolyase - Hahella chejuensis (strain KCTC 2396)
Length = 491
Score = 40.3 bits (90), Expect = 0.063
Identities = 29/120 (24%), Positives = 59/120 (49%), Gaps = 3/120 (2%)
Frame = +3
Query: 171 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPN--IKDKVGINRLRFLLQSLEDLD 344
WF+ DLR+ D+ L +A R+ + P+Y +P + G R F+ ++L++LD
Sbjct: 7 WFKRDLRVTDHGPLYHAA-----RQGPVAPLYVAEPEYWAQPDAGERRWGFVRETLQELD 61
Query: 345 SNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFV-QQDEYIEDIAEKKGV 521
L KL L+ + +++L L D + V L + ++ ++++ + + + GV
Sbjct: 62 QTLSKLGQPLWFMHDSMINVLEYLKDRFGVFELYSHQETGVQWCNRRNQIVREWCRRNGV 121
>UniRef50_A7QWQ7 Cluster: Chromosome chr16 scaffold_207, whole
genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr16 scaffold_207, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 718
Score = 40.3 bits (90), Expect = 0.063
Identities = 25/115 (21%), Positives = 54/115 (46%)
Frame = +3
Query: 156 ATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLE 335
+ + WF+ DLRI D+ L A +R + P+Y D I + L +L ++E
Sbjct: 58 SVAVLWFKHDLRIDDHPGLV----AAASRHRTVIPLYVFDRRILSRFSDEMLELVLVAME 113
Query: 336 DLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIED 500
DL +LK + L + G A + ++ + + + + +++ E + + +++
Sbjct: 114 DLRESLKDQGSNLMIRFGSAEKTIREIVKEVKATTIFAEEEVEHELRKMIDTVQE 168
>UniRef50_A5WDG4 Cluster: Deoxyribodipyrimidine photo-lyase; n=3;
Psychrobacter|Rep: Deoxyribodipyrimidine photo-lyase -
Psychrobacter sp. PRwf-1
Length = 550
Score = 39.9 bits (89), Expect = 0.083
Identities = 29/140 (20%), Positives = 66/140 (47%), Gaps = 11/140 (7%)
Frame = +3
Query: 147 SKTATVIHWFRLDLRIHDN----LALRNAINEAENRKHLLRPIYFLDPN--IKDKVGINR 308
S + + WFR DLR+HDN L L + +++ + L+ ++ + P + + I++
Sbjct: 4 SYKVSALMWFRRDLRLHDNTALTLLLEQVVQASQHTESCLQAVFVMTPKQWLAHDMSISQ 63
Query: 309 LRFLLQSLEDLDSNL-KKLNTCLYVLRGK----AVDLLPKLFDDWQVKYLTCQVDIDPEF 473
+ ++++L L +L L L VL+ + ++D++ D + ++ C + +
Sbjct: 64 VDLMMRTLTHLTRDLHHTLGIKLSVLQAESYSDSIDVIEAFCVDNHITHVGCNYEYEVNE 123
Query: 474 VQQDEYIEDIAEKKGVFINK 533
Q+D + K + N+
Sbjct: 124 QQRDTALAKRLSKLNIKFNQ 143
>UniRef50_A7SYS9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 524
Score = 39.5 bits (88), Expect = 0.11
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 13/169 (7%)
Frame = +3
Query: 147 SKTA-TVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPN--------IKDKVG 299
SKT TVI R DLR HDN AL A A+ + P+Y DP+ K
Sbjct: 4 SKTQKTVICLLRNDLRYHDNEALLWAHKNAD----FVLPLYCFDPDHYKTTWRFSLPKTA 59
Query: 300 INRLRFLLQSLEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQ----VKYLTCQVDIDP 467
R +FLL+S+ DL S L+ + L + + + ++ + KL + + V + Q ++
Sbjct: 60 QYRAKFLLESVTDLRSTLQIHGSNLIIRQCQPLEAVTKLTELLKPVAPVTSIVFQQEVTY 119
Query: 468 EFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKF 614
E + ++ + + +K G+ ++ T++ + + VP TY +F
Sbjct: 120 EELNVEKALVEFCKKSGIHMHTIWGSTLFHKDDIPYKAK-TVPDTYTQF 167
>UniRef50_Q0S6Q2 Cluster: Deoxyribodipyrimidine photo-lyase; n=3;
Corynebacterineae|Rep: Deoxyribodipyrimidine photo-lyase
- Rhodococcus sp. (strain RHA1)
Length = 446
Score = 39.1 bits (87), Expect = 0.14
Identities = 31/114 (27%), Positives = 55/114 (48%)
Frame = +3
Query: 159 TVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLED 338
T + WFR DLR+ D L + ++E+ R ++ LD + G R FL +SL
Sbjct: 3 TALVWFRRDLRLGD-LPTLHTVSESGAR---ALGLFVLDDRLLTTSGGARRDFLFRSLAA 58
Query: 339 LDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIED 500
LD +L+ L V++G VD++P++ + + D P ++D + +
Sbjct: 59 LDD---QLDGRLLVVKGDPVDVVPRVAKKVSAEEVHVSADYGPYGRERDAAVAE 109
>UniRef50_A0Z3E3 Cluster: Deoxyribodipyrimidine photolyase,
putative; n=3; Gammaproteobacteria|Rep:
Deoxyribodipyrimidine photolyase, putative - marine
gamma proteobacterium HTCC2080
Length = 490
Score = 39.1 bits (87), Expect = 0.14
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = +3
Query: 171 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINR--LRFLLQSLEDLD 344
WF+ DLR+ D+ L A+ A + LL +Y ++P + R F+ QSL DL+
Sbjct: 7 WFKRDLRLADHAPLSAAV--ALGQPMLL--VYIVEPELLKNPHYRRRHWHFIAQSLADLN 62
Query: 345 SNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYL 443
L+ T ++VL G + L + ++ +L
Sbjct: 63 HQLQPHGTKVWVLEGDPITLFTAINQSQRIHHL 95
>UniRef50_Q43125 Cluster: Cryptochrome-1; n=55; Streptophyta|Rep:
Cryptochrome-1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 681
Score = 39.1 bits (87), Expect = 0.14
Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 3/141 (2%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLR--FLLQSLED 338
I WFR DLR+ DN AL A+ R + ++ P + R+ +L SL
Sbjct: 15 IVWFRRDLRVEDNPALAAAV-----RAGPVIALFVWAPEEEGHYHPGRVSRWWLKNSLAQ 69
Query: 339 LDSNLKKLNTCLYVLRG-KAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKK 515
LDS+L+ L TCL R +V L + + DP + +D +D+ +
Sbjct: 70 LDSSLRSLGTCLITKRSTDSVASLLDVVKSTGASQIFFNHLYDPLSLVRDHRAKDVLTAQ 129
Query: 516 GVFINKRVQHTVYDVHKVLRE 578
G+ + +Y+ +V E
Sbjct: 130 GIAVRSFNADLLYEPWEVTDE 150
>UniRef50_A6CY79 Cluster: Deoxyribodipyrimidine photolyase; n=3;
Vibrio|Rep: Deoxyribodipyrimidine photolyase - Vibrio
shilonii AK1
Length = 472
Score = 38.7 bits (86), Expect = 0.19
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 12/102 (11%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAINEAENRKHL-----LRPIY---FLDPNIKDKVGINRLRFL 320
I+WF DLR+HDN L+ A +E +R H L+ +Y FL I D + F
Sbjct: 33 IYWFNHDLRLHDNKLLQKA-SEHVDRLHCVYFDELKTMYDRRFLPVEIDDSA---KREFK 88
Query: 321 LQSLEDLDSNLKKLNTCLYVLR----GKAVDLLPKLFDDWQV 434
+Q+L +L+ +L +L L+ + +AV L ++FD + +
Sbjct: 89 MQALGELNQSLMQLGQVLHQVSVTSLDEAVSQLEQMFDYYSI 130
>UniRef50_A4SQP9 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Aeromonas|Rep: Deoxyribodipyrimidine photolyase -
Aeromonas salmonicida (strain A449)
Length = 473
Score = 38.7 bits (86), Expect = 0.19
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Frame = +3
Query: 171 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPN--IKDKVGINRLRFLLQSLEDLD 344
WFR DLR+ DN ALR+A EA + ++ + P + K+ R +FLL +++L
Sbjct: 5 WFRNDLRLADNPALRHACAEAGE----VAALFVISPTQWQQHKMAPIRQQFLLAQVDELG 60
Query: 345 SNLKKLNTCLYVLRGKAVDLLP 410
L L L++LR + +P
Sbjct: 61 KALAALGIPLHLLRVETFAEMP 82
>UniRef50_A4B643 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Alteromonas macleodii 'Deep ecotype'|Rep:
Deoxyribodipyrimidine photolyase - Alteromonas macleodii
'Deep ecotype'
Length = 159
Score = 38.7 bits (86), Expect = 0.19
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAINEAENRK--HLLRPIYFLDPNIK-DKVGINRLRFLLQSLE 335
+ WFR DLR+HD A+ ++L F D +G +R FLLQ+L
Sbjct: 18 VFWFRHDLRLHDQPAIAELCTAVSQVTFTYILDDKCFDDAAFGFSPMGKHRHTFLLQTLS 77
Query: 336 DLDSNLKKLNTCLYVLRGKAVDLLPKLFD 422
DL L + L +L+G + + +L +
Sbjct: 78 DLKQQLNQRGHELLILKGNTAECIVQLLN 106
>UniRef50_Q6EAM9 Cluster: Cryptochrome 2A apoprotein; n=4;
rosids|Rep: Cryptochrome 2A apoprotein - Pisum sativum
(Garden pea)
Length = 629
Score = 38.7 bits (86), Expect = 0.19
Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 3/152 (1%)
Frame = +3
Query: 144 MSKTATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLR--F 317
M T++ WFR DLRI DN AL A + + P++ P + + R+ +
Sbjct: 1 MGSNRTIV-WFRRDLRIEDNPALAAAARDGS-----VFPVFIWCPKEEGQFYPGRVSRWW 54
Query: 318 LLQSLEDLDSNLKKLNTCLYVLR-GKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYI 494
L QSL LD +LK L L +++ ++ L + + Q + DP + +D I
Sbjct: 55 LKQSLAHLDQSLKSLGAKLVLIKTDSTLNALLECVNAIQATKVVFNHLYDPVSLVRDHNI 114
Query: 495 EDIAEKKGVFINKRVQHTVYDVHKVLRENNGA 590
++ + G+ + +Y+ ++ E A
Sbjct: 115 KEKLVELGISVKSYNGDLLYEPWELYDEKGHA 146
>UniRef50_Q0GKU4 Cluster: Cryptochrome 1 protein; n=1; Brassica
rapa|Rep: Cryptochrome 1 protein - Brassica campestris
(Field mustard)
Length = 704
Score = 38.7 bits (86), Expect = 0.19
Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 3/141 (2%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLR--FLLQSLED 338
I WFR DLR+ DN AL A+ R + ++ P + R+ +L SL
Sbjct: 13 IVWFRRDLRVEDNPALAAAV-----RAGPVIAVFVWAPEEEGHYQPGRVSRWWLKNSLAQ 67
Query: 339 LDSNLKKLNTCLYVLRG-KAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKK 515
LDS+L+ L TCL R +V L ++ + DP + +D +D +
Sbjct: 68 LDSSLRSLGTCLITKRSTDSVASLLEVVKSTGASQIFFNHLYDPLSLVRDHRAKDALTAE 127
Query: 516 GVFINKRVQHTVYDVHKVLRE 578
G+ + +Y+ +V E
Sbjct: 128 GIAVKSFNADLLYEPWEVTDE 148
>UniRef50_Q0V6S3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 642
Score = 38.7 bits (86), Expect = 0.19
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Frame = +3
Query: 141 KMSKTATVIHWFR-LDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGIN--RL 311
++ + V HWF DLRI DN AL +A A+++K L +Y + G + R+
Sbjct: 149 EVKEVTKVAHWFHPKDLRIQDNTALHHASELAQSKKKPLVGVYVNCAADESWHGTSPARV 208
Query: 312 RFLLQSLEDLDSNLKKLNTCLYVL 383
F+ + L+ + LK LN L L
Sbjct: 209 DFMCEGLKIMQKELKDLNIPLVFL 232
>UniRef50_P34205 Cluster: Deoxyribodipyrimidine photo-lyase; n=3;
root|Rep: Deoxyribodipyrimidine photo-lyase - Carassius
auratus (Goldfish)
Length = 556
Score = 38.7 bits (86), Expect = 0.19
Identities = 27/101 (26%), Positives = 44/101 (43%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEDLD 344
++W D R+ DN AL A A K L + L P D + F+L+ L+++
Sbjct: 111 LYWMSRDQRVQDNWALIYAQQLALAEKLPLHICFCLVPRYLDAT-YRQYAFMLKGLQEVA 169
Query: 345 SNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDP 467
K L+ ++L G+ LP + W K+ D +P
Sbjct: 170 KECKSLDIQFHLLSGEPGQNLPSFVEKW--KFGAVVTDFNP 208
>UniRef50_A4CPD0 Cluster: Deoxyribodipyrimidine photolyase; n=4;
Flavobacteria|Rep: Deoxyribodipyrimidine photolyase -
Robiginitalea biformata HTCC2501
Length = 515
Score = 38.3 bits (85), Expect = 0.25
Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 4/168 (2%)
Frame = +3
Query: 159 TVIHWFRLDLRIHDNLALRNAI-NEAENRKHLLRPIYFLDPNIK-DKVGINRLRFLLQSL 332
T ++WFR DLR+ DN L A ++ P F + + ++G R FL +S+
Sbjct: 46 TALYWFRNDLRVTDNPGLLAACSSQRVLTVFCFDPADFREGDYGIRRMGPYRAGFLRESV 105
Query: 333 EDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVD-IDPEFVQQDEYIEDIAE 509
L L+ LN L++ G D+LP + + V L Q + E + D E +
Sbjct: 106 LALREQLQGLNISLHIHFGPPGDILPGMIKKYGVTDLHLQREWTRDECLALDAVREGL-- 163
Query: 510 KKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKF-LSLVKSINVKEP 650
GV +++ Q ++ + ++ +P + F K ++V+ P
Sbjct: 164 PPGVTVHEHYQQFLFHPEDLPYDSFDDIPDVFTGFRKKCEKHVSVRSP 211
>UniRef50_A1KB68 Cluster: Deoxyribodipyrimidine photo-lyase; n=24;
Betaproteobacteria|Rep: Deoxyribodipyrimidine
photo-lyase - Azoarcus sp. (strain BH72)
Length = 503
Score = 38.3 bits (85), Expect = 0.25
Identities = 35/146 (23%), Positives = 65/146 (44%), Gaps = 10/146 (6%)
Frame = +3
Query: 171 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKV---GINRLRFLLQSLEDL 341
WFR DLR D+ AL +A+ E E + + D +I D + R+ F+ ++ +L
Sbjct: 30 WFRRDLRCVDHAALYHALREHER----VYCAFVFDTDILDALPTRADRRVEFIHAAVVEL 85
Query: 342 DSNLKKLN-------TCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIED 500
D L+ L+ + L V G+A + +P L V + D +P + +D + +
Sbjct: 86 DRALEALSREAGGSGSGLIVRHGRAQEAIPALAQALGVDAVYVNRDYEPAAIARDRAVAE 145
Query: 501 IAEKKGVFINKRVQHTVYDVHKVLRE 578
+ G + ++D +VL +
Sbjct: 146 RLAEHGRTLRDFKDQVIFDRDEVLTQ 171
>UniRef50_A0Q6Z2 Cluster: Deoxyribodipyrimidine photolyase; n=6;
Francisella tularensis|Rep: Deoxyribodipyrimidine
photolyase - Francisella tularensis subsp. novicida
(strain U112)
Length = 464
Score = 38.3 bits (85), Expect = 0.25
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 1/130 (0%)
Frame = +3
Query: 144 MSKTATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLL 323
MSK IHWFR DLR+ DN AL A E I+ LD N +G +L
Sbjct: 1 MSKKIA-IHWFRQDLRLADNPALYQASQADET-----ITIFILDKN--QDIGSASKLWLH 52
Query: 324 QSLEDLDSNL-KKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIED 500
SL L+S+L KLN G ++++ K+ + + D + +D I+
Sbjct: 53 HSLNSLNSSLDNKLN----FYSGNPLEIIKKIIKENNITDFYWNRCYDKYSIDRDTQIKQ 108
Query: 501 IAEKKGVFIN 530
++ + +N
Sbjct: 109 FLQQHKINVN 118
>UniRef50_P05066 Cluster: Deoxyribodipyrimidine photo-lyase,
mitochondrial precursor; n=2; Saccharomyces
cerevisiae|Rep: Deoxyribodipyrimidine photo-lyase,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 565
Score = 38.3 bits (85), Expect = 0.25
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Frame = +3
Query: 135 KXKMSKTATVIHWFRLDLRIHDNLALRNAIN-----EAENRKHLLRPIYFL-DPNIKDKV 296
K +TV+HWFR DLR++DN+ L ++ +N K L +Y + + + + +
Sbjct: 68 KTSFENVSTVMHWFRNDLRLYDNVGLYKSVALFQQLRQKNAKAKLYAVYVINEDDWRAHM 127
Query: 297 GIN-RLRFLLQSLEDLDSNLKKLN 365
+L F++ +L++L +L +L+
Sbjct: 128 DSGWKLMFIMGALKNLQQSLAELH 151
>UniRef50_Q9KR33 Cluster: Cryptochrome DASH; n=22;
Gammaproteobacteria|Rep: Cryptochrome DASH - Vibrio
cholerae
Length = 461
Score = 38.3 bits (85), Expect = 0.25
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 5/174 (2%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI-----KDKVGINRLRFLLQS 329
++WF DLR++DN L A + + R L + P + + + G + RFL Q+
Sbjct: 7 LYWFTNDLRVNDNPLLEQASQQVD-RLICLYCYPSITPFLARYAQQTQWGEAKKRFLNQT 65
Query: 330 LEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAE 509
L DLD +L L L+V L L QV+ VD ++ +
Sbjct: 66 LADLDHSLSTLGQKLWVTPLLPYQALRHLLT--QVEITDIYVDAVAGSDERQAIARIHQD 123
Query: 510 KKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVL 671
V I+++ H++ L A+P T+ +F V++I++ P+ +VL
Sbjct: 124 FSSVHIHQQALHSLLS-EPQLPFALEALPSTFTQFRKQVETISLSAPMGYPHVL 176
>UniRef50_A6EZB3 Cluster: Deoxyribodipyrimidine photolyase family
protein; n=1; Marinobacter algicola DG893|Rep:
Deoxyribodipyrimidine photolyase family protein -
Marinobacter algicola DG893
Length = 507
Score = 37.9 bits (84), Expect = 0.33
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +3
Query: 159 TVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLRFLLQSL 332
T + WF+ DLR D+ L A+N E + PIY ++ + + F+ L
Sbjct: 2 TTVVWFKRDLRTRDHEPLIAAVNLGEP----VIPIYVVEDDYWQLPDTSERQWAFIRDCL 57
Query: 333 EDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTC 449
DLD LK L V G D+L +L + V+ + C
Sbjct: 58 LDLDQQLKYAGNRLVVCNGAVTDVLNQLKANHDVQRVFC 96
>UniRef50_Q1G0Y2 Cluster: Cryptochrome dash; n=1; Karenia
brevis|Rep: Cryptochrome dash - Karenia brevis
(Dinoflagellate)
Length = 523
Score = 37.9 bits (84), Expect = 0.33
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Frame = +3
Query: 171 WFRLDLRIHDNLALRNAINEAENRK--HLLRPIYFLDPNIKD--KVGINRLRFLLQSLED 338
WFR DLR+ D AL A +A + ++ P F+D + K R RFL++SL +
Sbjct: 24 WFRTDLRLDDQPALSTACEDALSLLPIYVFDPAKFIDLTLAGARKSSARRARFLIESLVN 83
Query: 339 LDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLT 446
L L+ + L V G ++ L Y+T
Sbjct: 84 LRRRLEDRGSGLAVAIGDPAVVIADLCASASAIYVT 119
>UniRef50_UPI0000E0FEC6 Cluster: deoxyribodipyrimidine photolyase,
putative; n=1; alpha proteobacterium HTCC2255|Rep:
deoxyribodipyrimidine photolyase, putative - alpha
proteobacterium HTCC2255
Length = 501
Score = 37.5 bits (83), Expect = 0.44
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +3
Query: 150 KTATVIHWFRLDLRIHDNLALRNAINEAEN--RKHLLRPIYFLDPNIKDKVGINRLRFLL 323
+ A I WF+ DLR+ D+ L ++ ++ P DP+ ++ RF++
Sbjct: 2 RPALDIVWFKRDLRLRDHAPLCRVMHNPRPILLLYIFEPDLIHDPHYSER----HWRFVV 57
Query: 324 QSLEDLDSNLKKLNTCLYVLRG 389
QSL DL + L + T + VL+G
Sbjct: 58 QSLVDLQAQLSEFQTQVLVLQG 79
>UniRef50_Q41DS7 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Exiguobacterium sibiricum 255-15|Rep:
Deoxyribodipyrimidine photolyase - Exiguobacterium
sibiricum 255-15
Length = 400
Score = 37.5 bits (83), Expect = 0.44
Identities = 25/90 (27%), Positives = 45/90 (50%)
Frame = +3
Query: 171 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEDLDSN 350
W+R DLR+ D+ AL A E + ++R ++ D G ++ F ++L+ L+ +
Sbjct: 6 WYRKDLRVDDHEALTRACEE----EKIVRAVFV--RQTADGRGKQQMTFEEETLQSLNEH 59
Query: 351 LKKLNTCLYVLRGKAVDLLPKLFDDWQVKY 440
L +L L +L+G+ V+ L V Y
Sbjct: 60 LVQLGIELTILQGETVEQLTSFIQPEDVVY 89
>UniRef50_Q1GUF7 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Sphingopyxis alaskensis|Rep: Deoxyribodipyrimidine
photolyase - Sphingopyxis alaskensis (Sphingomonas
alaskensis)
Length = 457
Score = 37.5 bits (83), Expect = 0.44
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Frame = +3
Query: 153 TATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD--KVGINRLRFLLQ 326
TA+++ W R DLR+HD+ AL AI + P++ LD K+G + +L
Sbjct: 2 TASLL-WLRQDLRVHDHPALLAAIAGG-----AVIPVFILDDETPGTWKIGAAQRWWLHH 55
Query: 327 SLEDLDSNLKKLNTCLYVLRGKA 395
SL L ++LKK + L + RG A
Sbjct: 56 SLTALGASLKKRGSKLILRRGAA 78
>UniRef50_A6H180 Cluster: Deoxyribodipyrimidine photolyase PhrB2;
n=1; Flavobacterium psychrophilum JIP02/86|Rep:
Deoxyribodipyrimidine photolyase PhrB2 - Flavobacterium
psychrophilum (strain JIP02/86 / ATCC 49511)
Length = 502
Score = 37.5 bits (83), Expect = 0.44
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 2/147 (1%)
Frame = +3
Query: 144 MSKTATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIK--DKVGINRLRF 317
M K I WF+ DLR DN AL +A + L IY +P++ D + RF
Sbjct: 1 MEKKVVNIVWFKRDLRFTDNEALFHAHHSGLP----LLLIYVFEPSVMNYDDSDVRHWRF 56
Query: 318 LLQSLEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIE 497
+ +SL D+ L + + +Y ++ + +L + V+ + +I + +
Sbjct: 57 VYESLLDMQLKLDLVASKIYFFHNESKIIFSELIKIFNVQTIFSHQEIGNKIT----FDR 112
Query: 498 DIAEKKGVFINKRVQHTVYDVHKVLRE 578
DI E + F + + +H V+R+
Sbjct: 113 DI-EMQAFFNKNNIIWKEFQLHGVIRK 138
>UniRef50_A4A8B3 Cluster: Deoxyribodipyrimidine photo-lyase; n=4;
Bacteria|Rep: Deoxyribodipyrimidine photo-lyase -
Congregibacter litoralis KT71
Length = 482
Score = 37.5 bits (83), Expect = 0.44
Identities = 40/175 (22%), Positives = 79/175 (45%), Gaps = 3/175 (1%)
Frame = +3
Query: 153 TATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIK-DKV--GINRLRFLL 323
T TVI WFR DLR++D AL+ A + R+ L P+Y D + D V G +R +L
Sbjct: 2 TDTVILWFRQDLRLNDLPALQAA--SRDGRRVL--PLYIFDEDSPGDWVMGGASRW-WLH 56
Query: 324 QSLEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDI 503
SL L +++ L RGK+ ++L + + C +P ++++ + +
Sbjct: 57 HSLSALARDIEDQGGKLIFRRGKSREVLGDICKSTDATAVYCSRRYEPWASEEEKMLHED 116
Query: 504 AEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNV 668
+ + +++ V+ ++ G + + F ++ EP+ + +V
Sbjct: 117 LGNSDIDFKRYGGTLLHEPGNVMTQSGGPYKV-FTPFWRACLELDRAEPVPVPDV 170
>UniRef50_Q712D5 Cluster: Cryptochrome 2; n=7; Oryza sativa|Rep:
Cryptochrome 2 - Oryza sativa (Rice)
Length = 651
Score = 37.5 bits (83), Expect = 0.44
Identities = 43/180 (23%), Positives = 79/180 (43%), Gaps = 3/180 (1%)
Frame = +3
Query: 144 MSKTATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLR--F 317
M+ + + WFR DLRI DN AL A R ++ P++ P + + R +
Sbjct: 1 MAGSERTVVWFRRDLRIDDNPAL-----AAAARDGVVLPVFIWCPADEGQFYPGRCSRWW 55
Query: 318 LLQSLEDLDSNLKKLNTCLYVLRGKA-VDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYI 494
L QSL L +L+ L L ++R ++ ++ L + D L DP + +D+ I
Sbjct: 56 LKQSLPHLSQSLESLGCPLVLIRAESTLEALLRCIDSVGATRLVYNHLYDPVSLVRDDKI 115
Query: 495 EDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLS 674
+ G+ I +Y+ ++ +++G T+ + + PI+IS L+
Sbjct: 116 KKELSALGISIQSFNGDLLYEPWEIY-DDSGLAFTTFNMYWEKCMEL----PIDISPSLA 170
>UniRef50_A0DDP5 Cluster: Chromosome undetermined scaffold_47, whole
genome shotgun sequence; n=2; Eukaryota|Rep: Chromosome
undetermined scaffold_47, whole genome shotgun sequence -
Paramecium tetraurelia
Length = 3078
Score = 37.5 bits (83), Expect = 0.44
Identities = 33/146 (22%), Positives = 70/146 (47%), Gaps = 5/146 (3%)
Frame = +3
Query: 237 NRKHLLRPIYFLDPNIKDKVG--INRLRFLLQSLEDLDSNLKKLNTCLYVL-RGKAVDLL 407
N + + + L P I V I+ +++ ++E+ +S +L+ +Y L R ++ L
Sbjct: 1044 NHIQVSKALSLLQPGIFALVSQEIDWIQWFSLNIENYNSVQNELSFAIYNLARSGKIEFL 1103
Query: 408 PKLFDDWQVKY--LTCQVDIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLREN 581
+ ++Q + + CQ++ DP+F+ E I++ G+ T+YD ++
Sbjct: 1104 EQFLSNFQKQQSLMPCQINPDPDFIISSNQDEFISDDNGLI-------TIYD-----KDK 1151
Query: 582 NGAVPLTYQKFLSLVKSINVKEPIEI 659
N + T ++ L+ + S K P+EI
Sbjct: 1152 NNEIQNTKEEMLNDLASFYAKYPLEI 1177
>UniRef50_Q5NMI6 Cluster: DNA photolyase; n=1; Zymomonas
mobilis|Rep: DNA photolyase - Zymomonas mobilis
Length = 469
Score = 37.1 bits (82), Expect = 0.58
Identities = 24/91 (26%), Positives = 47/91 (51%)
Frame = +3
Query: 144 MSKTATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLL 323
MS T ++ WFR D R+ DN A+ AI ++R ++ +++ + K ++
Sbjct: 1 MSDTRPILIWFRHDFRLRDNAAITAAI---QSRNPVI--CFYIQESADAKTESAADWWVA 55
Query: 324 QSLEDLDSNLKKLNTCLYVLRGKAVDLLPKL 416
+SL L+ LK+ L++ G A ++P++
Sbjct: 56 ESLLALNRQLKEKGGQLHLFEGDAEKIIPEI 86
>UniRef50_Q4USX1 Cluster: Photolyase-like protein; n=6;
Xanthomonas|Rep: Photolyase-like protein - Xanthomonas
campestris pv. campestris (strain 8004)
Length = 484
Score = 37.1 bits (82), Expect = 0.58
Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDK--VGINRLRFLLQSLED 338
I WFR DLR+ DN ALR A++ H P+Y P+ + + G + +SL
Sbjct: 17 IVWFRRDLRLEDNPALRAALDAG----HDPIPLYIDAPHEEGQWAPGAASRAWRHRSLAA 72
Query: 339 LDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 518
LD++L+ + L + +G + +L + + + +P +D I+ ++G
Sbjct: 73 LDASLRARGSALLIRQGDSAQVLDAVIAQTEAVAVYWNRKYEPATQPRDAQIKRSLRERG 132
Query: 519 V 521
+
Sbjct: 133 L 133
>UniRef50_Q6SFP7 Cluster: Deoxyribodipyrimidine photolyase family
protein; n=1; uncultured bacterium 580|Rep:
Deoxyribodipyrimidine photolyase family protein -
uncultured bacterium 580
Length = 478
Score = 37.1 bits (82), Expect = 0.58
Identities = 46/185 (24%), Positives = 80/185 (43%), Gaps = 5/185 (2%)
Frame = +3
Query: 150 KTATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPN-IKDKVGINR-LRFLL 323
K T I W + DLR+ D+ L EA R +Y +P+ I D R RF+
Sbjct: 2 KPKTNIVWLKRDLRLTDHAPL----YEATCRDEQFLVLYIYEPSLINDSHTDERHWRFIQ 57
Query: 324 QSLEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDI 503
QSL ++ L K + L + G+A + ++ + ++ + + + Y D
Sbjct: 58 QSLSVMEKILAKQSKQLSIAYGEADQIFSEIINQHEITNVFSHEETGLKLT----YERDK 113
Query: 504 AEKKGVFINKRVQHTVYDVHKVLR--ENNGAVPLTYQKFL-SLVKSINVKEPIEISNVLS 674
KK +F K++Q Y + V+R N + K + +K+IN+ E IS+
Sbjct: 114 KLKK-IFNAKKIQWHEYQTNAVIRGLNNRKTWEKQWNKVMREEIKTINLAEANIISHNFP 172
Query: 675 SHCKP 689
++ P
Sbjct: 173 NYSIP 177
>UniRef50_A4BJR5 Cluster: Putative deoxyribodipyrimidine photolyase;
n=1; Reinekea sp. MED297|Rep: Putative
deoxyribodipyrimidine photolyase - Reinekea sp. MED297
Length = 465
Score = 37.1 bits (82), Expect = 0.58
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = +3
Query: 159 TVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYF-LDPNIKDK-VGINRLRFLLQSL 332
T + WFR DLR+ D+ AL A+N A+ ++ +R ++F D + G ++ +L
Sbjct: 2 TQLVWFRNDLRVSDHEALFQALNRAKQQQTPVRALFFWSDAQWRSHGAGDAKIAATFSAL 61
Query: 333 EDLDSNLKKLNTCLYVL 383
+ L L KL L VL
Sbjct: 62 QALHQKLAKLGIPLDVL 78
>UniRef50_Q8TNY8 Cluster: Putative uncharacterized protein; n=5;
cellular organisms|Rep: Putative uncharacterized protein
- Methanosarcina acetivorans
Length = 689
Score = 37.1 bits (82), Expect = 0.58
Identities = 31/79 (39%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Frame = +3
Query: 207 ALRNAINEAENRKH-LLRPI--YFLDPNIKDKVGINRLRFLLQSLEDLDSNLK------K 359
ALRN N N K+ LL+ + YFLD N+K + + L Q LED DS K K
Sbjct: 188 ALRNVENSIYNGKNSLLKNVLNYFLDYNLKSSI-----KKLEQDLEDTDSKAKLDECLTK 242
Query: 360 LNTCLYVLRGKAVDLLPKL 416
L C RG++ DLL +
Sbjct: 243 LECCRNEFRGQSKDLLDSI 261
>UniRef50_Q8D319 Cluster: PhrB protein; n=1; Wigglesworthia
glossinidia endosymbiont of Glossina brevipalpis|Rep:
PhrB protein - Wigglesworthia glossinidia brevipalpis
Length = 475
Score = 36.7 bits (81), Expect = 0.77
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
Frame = +3
Query: 171 WFRLDLRIHDNLALRNA-INEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEDLDS 347
WFR DLR++DN AL A ++E ++ +L I + V NR+RF+ +++ L
Sbjct: 7 WFRKDLRLNDNPALYYACVDEYKSASGIL--ILNKKKWNEKIVSKNRIRFMYKNIFSLKR 64
Query: 348 NLKKLNTCL--YVLRG--KAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYI 494
NLKK+ L Y R + LL +VK L I+ E +++D+ I
Sbjct: 65 NLKKIGIELIFYTCRDFFEYTCLLYNFCYTNKVKELYFNKGIEKEDLEEDKII 117
>UniRef50_Q0C191 Cluster: Deoxyribodipyrimidine photolyase family
protein; n=2; Alphaproteobacteria|Rep:
Deoxyribodipyrimidine photolyase family protein -
Hyphomonas neptunium (strain ATCC 15444)
Length = 485
Score = 36.7 bits (81), Expect = 0.77
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Frame = +3
Query: 144 MSKTATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI---KDKVGINRLR 314
MS + I WFR DLR+ DN AL A+N L +Y + ++ G +R
Sbjct: 1 MSSASPAILWFREDLRLTDNPALNAAVNSGRP----LICVYLRETGAGAPREMGGASRW- 55
Query: 315 FLLQSLEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDD 425
+L +SL L ++L+ + L + G A ++P L ++
Sbjct: 56 WLNKSLASLGASLEAIGGKLTLRTGPAEKIIPALVEE 92
>UniRef50_Q7RKS9 Cluster: FAD binding domain of DNA photolyase,
putative; n=5; Plasmodium (Vinckeia)|Rep: FAD binding
domain of DNA photolyase, putative - Plasmodium yoelii
yoelii
Length = 849
Score = 36.7 bits (81), Expect = 0.77
Identities = 31/131 (23%), Positives = 59/131 (45%), Gaps = 1/131 (0%)
Frame = +3
Query: 183 DLRIHDNLALRNAINEAENRK-HLLRPIYFLDPNIKDKVGINRLRFLLQSLEDLDSNLKK 359
D RI DN ++ A + A+ K +LL Y N K+K + L+ L++L+ KK
Sbjct: 360 DFRIADNWSIIYAYDMAKKNKCNLLACTYI---NRKEKFTERYINIKLKVLKNLEEEFKK 416
Query: 360 LNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFINKRV 539
LN YV+ +D + ++K + C Q +++E++ + K++
Sbjct: 417 LNIPFYVIPIFMIDEFMEFLRIHEIKTVVCDFH---SLGYQKQFVENLVQMSN---KKKI 470
Query: 540 QHTVYDVHKVL 572
+ D H ++
Sbjct: 471 KILQVDSHNII 481
>UniRef50_P12768 Cluster: Deoxyribodipyrimidine photo-lyase; n=6;
Actinomycetales|Rep: Deoxyribodipyrimidine photo-lyase -
Streptomyces griseus
Length = 455
Score = 36.7 bits (81), Expect = 0.77
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +3
Query: 174 FRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGI---NRLRFLLQSLEDLD 344
F DLR+HDN LR A+ +A+ + P++ D + + G N L FL L LD
Sbjct: 8 FTSDLRLHDNPVLRAALRDADE----VVPLFVRDDAV-HRAGFDAPNPLAFLADCLAALD 62
Query: 345 SNLKKLNTCLYVLRGKA 395
+ L+ L V RG+A
Sbjct: 63 AGLRHRGGRLIVRRGEA 79
>UniRef50_UPI000155ED35 Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 355
Score = 36.3 bits (80), Expect = 1.0
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Frame = +3
Query: 174 FRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIK-DKVGINRLRFLLQSLEDLDSN 350
FR LRI D + + ++ LL + N+ ++ LRFLLQ+ ED ++
Sbjct: 59 FRAQLRISDQHKEIKTLQDEQDEITLLLSLVKSSRNLNLNEKNYTELRFLLQTKEDYEAL 118
Query: 351 LKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYI 494
+K + L L K V + K+ + Q+ + Q +P +Q+ +I
Sbjct: 119 IKSMKALLAELDEKIVQMEKKIINQKQI-FTKVQEANNPRKLQKQIHI 165
>UniRef50_Q6AK21 Cluster: Probable DNA photolyase; n=1; Desulfotalea
psychrophila|Rep: Probable DNA photolyase - Desulfotalea
psychrophila
Length = 458
Score = 36.3 bits (80), Expect = 1.0
Identities = 24/83 (28%), Positives = 39/83 (46%)
Frame = +3
Query: 162 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEDL 341
V++W D R+ DN AL A EA +R+ L ++ L P+ L F+L+ L +
Sbjct: 27 VVYWVSRDQRVRDNWALLWAQQEAISRQKGLLVVFCLVPDYLGAKSSQYL-FMLRGLARM 85
Query: 342 DSNLKKLNTCLYVLRGKAVDLLP 410
L ++N + D+LP
Sbjct: 86 QKKLHEMNIHFTLFEQSPDDILP 108
>UniRef50_A1ZF62 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Microscilla marina ATCC 23134|Rep: Deoxyribodipyrimidine
photolyase - Microscilla marina ATCC 23134
Length = 545
Score = 36.3 bits (80), Expect = 1.0
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +3
Query: 171 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKV--GINRLRFLLQSLEDLD 344
WF+ DLR+ D+ L+ AI LL +Y +P+++ I +F+ QS+EDL+
Sbjct: 42 WFKRDLRLEDHAPLKAAIE--VGLPVLL--VYVFEPSLQQSPDWNIRHWQFVYQSIEDLN 97
Query: 345 SNLKKLNTCLYVLRGKAVDLLPKLFDDWQV 434
L+ L+ + D+ + Q+
Sbjct: 98 FELEDYQVKLHCFHAEVPDVFEYILKTHQI 127
>UniRef50_Q5LS53 Cluster: Deoxyribodipyrimidine photolyase; n=25;
Proteobacteria|Rep: Deoxyribodipyrimidine photolyase -
Silicibacter pomeroyi
Length = 481
Score = 35.9 bits (79), Expect = 1.4
Identities = 30/126 (23%), Positives = 56/126 (44%)
Frame = +3
Query: 144 MSKTATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLL 323
MS+T +I+W R DLR+ D+ L A A R + P++ D ++ R L
Sbjct: 1 MSETRAIIYWLRRDLRLADHPGL--AAAAASGRP--VVPVFIHDESVAALGAAPAFRLGL 56
Query: 324 QSLEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDI 503
LE + L + + L + RG A +L L + + + P+ + +D ++
Sbjct: 57 -GLERFGATLGDMGSRLILRRGSAPAVLQALIAETGAGAVWWTREYTPQAITRDSALKTA 115
Query: 504 AEKKGV 521
++ G+
Sbjct: 116 LQQAGI 121
>UniRef50_Q3W0H9 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Frankia sp. EAN1pec|Rep: Deoxyribodipyrimidine
photolyase - Frankia sp. EAN1pec
Length = 409
Score = 35.9 bits (79), Expect = 1.4
Identities = 25/61 (40%), Positives = 34/61 (55%)
Frame = +3
Query: 171 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEDLDSN 350
W R DLR+ DN AL A AE+ + L ++ LD ++ G RL FL + L DLD+
Sbjct: 3 WLRRDLRLDDNPALLAA---AESGRVL--ALFVLDDALRRPSGPVRLAFLHRCLRDLDAQ 57
Query: 351 L 353
L
Sbjct: 58 L 58
>UniRef50_A2FJY4 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1110
Score = 35.9 bits (79), Expect = 1.4
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Frame = +3
Query: 417 FDDWQVKYLTCQVDIDPE--FVQQD-EYIEDIAEKKGVFINKRVQHTVY--DVHKVLREN 581
F+DWQ KYL D + E F D E+I+ K G + R + Y D++K++ +
Sbjct: 429 FEDWQKKYLNIDEDEEEESSFSDDDIEFIDTETSKSGKKLTPREKELQYFRDINKIVEKQ 488
Query: 582 NGAVPLTYQK 611
N T QK
Sbjct: 489 NQRKKQTKQK 498
>UniRef50_Q28811 Cluster: Deoxyribodipyrimidine photo-lyase; n=26;
root|Rep: Deoxyribodipyrimidine photo-lyase - Potorous
tridactylus (Potoroo)
Length = 532
Score = 35.9 bits (79), Expect = 1.4
Identities = 30/136 (22%), Positives = 57/136 (41%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEDLD 344
++W D R+ DN A A A +K L + L P I F+L+ LE++
Sbjct: 100 VYWMSRDQRVQDNWAFLYAQRLALKQKLPLHVCFCLAPCFLGAT-IRHYDFMLRGLEEVA 158
Query: 345 SNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVF 524
+KL ++L G D+LP + + D P + ++++D+ +
Sbjct: 159 EECEKLCIPFHLLLGLPKDVLPAFVQTHGIGGIV--TDFSP-LLHHTQWVKDVQDA---- 211
Query: 525 INKRVQHTVYDVHKVL 572
+ ++V D H ++
Sbjct: 212 LPRQVPFVQVDAHNIV 227
>UniRef50_P57386 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Buchnera aphidicola (Acyrthosiphon pisum)|Rep:
Deoxyribodipyrimidine photo-lyase - Buchnera aphidicola
subsp. Acyrthosiphon pisum (Acyrthosiphon pisumsymbiotic
bacterium)
Length = 483
Score = 35.9 bits (79), Expect = 1.4
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +3
Query: 171 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPN--IKDKVGINRLRFLLQSLEDLD 344
WFR DLR++DN AL A +N + ++ P V ++ F+ L L
Sbjct: 7 WFRNDLRVYDNTALHQA---CQNDTDKVISLFISTPKQWHNQSVSKKKISFMYYHLISLQ 63
Query: 345 SNLKKLNTCLY 377
L KLN LY
Sbjct: 64 KELLKLNIILY 74
>UniRef50_Q5QXE0 Cluster: Cryptochrome DASH; n=4;
Gammaproteobacteria|Rep: Cryptochrome DASH - Idiomarina
loihiensis
Length = 449
Score = 35.9 bits (79), Expect = 1.4
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Frame = +3
Query: 174 FRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIK-------DKVGINRLRFLLQSL 332
FR DLR+ DNLAL EA R L + +P +G +R FL QSL
Sbjct: 21 FRNDLRVEDNLAL----YEAAQRSETLICCFCFNPTQNKYGHYGIPAMGKHRFTFLQQSL 76
Query: 333 EDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQV 434
+ L + L+ L VL G +L +L + QV
Sbjct: 77 KQLRTELEMRGQKLIVLTGTFDRILTELISERQV 110
>UniRef50_Q1VN24 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Psychroflexus torquis ATCC 700755|Rep:
Deoxyribodipyrimidine photolyase - Psychroflexus torquis
ATCC 700755
Length = 380
Score = 35.5 bits (78), Expect = 1.8
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +3
Query: 261 IYFLDPNIKDKVGINRLRF--LLQSLEDLDSNLKKLNTCLYVLRGKAVDL 404
IY D N + G + ++F LL LED D LK+ N+ L+V G DL
Sbjct: 31 IYLFDKNYWEANGKSEIQFNFLLDCLEDFDRKLKEKNSQLFVFSGNYFDL 80
>UniRef50_Q1MZA5 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Oceanobacter sp. RED65|Rep: Deoxyribodipyrimidine
photolyase - Oceanobacter sp. RED65
Length = 440
Score = 35.5 bits (78), Expect = 1.8
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Frame = +3
Query: 174 FRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDP-NIKDK------VGINRLRFLLQSL 332
F DLR+HD+ L+ A N+ R L +YFL P + K +G R FL Q L
Sbjct: 11 FSKDLRLHDHPGLKQA-NDLSER---LACVYFLSPYEFEPKSFSVCPMGKQRYEFLRQGL 66
Query: 333 EDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVK 437
DL ++L ++ L+V + K L ++ + +++
Sbjct: 67 CDLRNSLNDIDHELHVFQEKVAPGLERIIEQNKIE 101
>UniRef50_A4B8N9 Cluster: Deoxyribodipyrimidine photolyase,
putative; n=1; Alteromonas macleodii 'Deep ecotype'|Rep:
Deoxyribodipyrimidine photolyase, putative - Alteromonas
macleodii 'Deep ecotype'
Length = 451
Score = 35.5 bits (78), Expect = 1.8
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Frame = +3
Query: 147 SKTATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDK--VGINRLRFL 320
+K I W + DLR+ D+ L A+ A N + LL +Y +P++ ++ + + F+
Sbjct: 6 TKPPITIIWLKRDLRLRDHEPLFRAV--ASNERILL--LYCWEPSLIEEPHMSVRHWHFI 61
Query: 321 LQSLEDLDSNLKKLNTCLYVLRGKAVDLL 407
QS++D++ L + + + L +AVD L
Sbjct: 62 QQSIDDINGQLPE-HVNVLTLHMEAVDAL 89
>UniRef50_Q8PYK9 Cluster: Deoxyribodipyrimidine photolyase; n=3;
Methanosarcina|Rep: Deoxyribodipyrimidine photolyase -
Methanosarcina mazei (Methanosarcina frisia)
Length = 464
Score = 35.5 bits (78), Expect = 1.8
Identities = 26/114 (22%), Positives = 53/114 (46%)
Frame = +3
Query: 162 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEDL 341
V++W D R DN AL + A+ + ++ L + GI + F+L+ L++L
Sbjct: 21 VVYWMSRDQRAEDNWALLFSRAIAKEANVPVVVVFCLTDEFLE-AGIRQYEFMLKGLQEL 79
Query: 342 DSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDI 503
+ +L + + LRG + + + D+ T D P + ++++IE +
Sbjct: 80 EVSLSRKKIPSFFLRGDPGEKISRFVKDYNAG--TLVTDFSPLRI-KNQWIEKV 130
>UniRef50_Q0N448 Cluster: DNA photolyase 2; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: DNA photolyase 2 - Clanis
bilineata nucleopolyhedrosis virus
Length = 372
Score = 35.1 bits (77), Expect = 2.4
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Frame = +3
Query: 162 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEDL 341
V++W D R+ DN A+ A A R+ L + L + + + + FLL+ L+ +
Sbjct: 123 VVYWMSRDSRVQDNWAMIYAQRLAIERQVPLHVCFCLTSSFLN-ASLRQFDFLLEGLKSV 181
Query: 342 DSNLKKLNTCLYVLRGKAVDLLPKLFDDW-QVKYLTCQV-DIDPEFVQQD 485
+LN +VL G DL +DW Q ++ V D +P V +D
Sbjct: 182 QRECHELNIGFHVLDGSG-DL---TLNDWVQTNNISAVVCDFNPLRVVRD 227
>UniRef50_Q5ZYZ9 Cluster: Deoxyribodipyrimidine photolyase; n=4;
Legionella pneumophila|Rep: Deoxyribodipyrimidine
photolyase - Legionella pneumophila subsp. pneumophila
(strain Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 471
Score = 35.1 bits (77), Expect = 2.4
Identities = 27/109 (24%), Positives = 52/109 (47%)
Frame = +3
Query: 171 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEDLDSN 350
WFR DLR+ DN A A + E ++ P+Y D +G + +L SL L +
Sbjct: 7 WFRQDLRLTDNPAFIEACSHHE----IVIPLYIYDDKC-SVLGQAQAWWLHYSLIALGKS 61
Query: 351 LKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIE 497
L + L + +G +++ +L + V+ + +P+ + +D+ I+
Sbjct: 62 LNQQGLSLVLRKGSPQEIILELVAQYGVESVYWNRCYEPQVIARDKKIK 110
>UniRef50_Q28R72 Cluster: Deoxyribodipyrimidine photolyase; n=5;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
Jannaschia sp. (strain CCS1)
Length = 517
Score = 35.1 bits (77), Expect = 2.4
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +3
Query: 162 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLRFLLQSLE 335
V+ F+ DLR+ DN AL A+ A +R P++ +P + + RF+ +SLE
Sbjct: 4 VLVLFKRDLRVQDNPAL--AL--AASRDGAALPVFVAEPEAWAQPDASARQWRFVAESLE 59
Query: 336 DLDSNLKKLNTCLYVLRGKAVDLL 407
L ++L L L V RG + +L
Sbjct: 60 GLRADLAALGAPLIVRRGDMMAVL 83
>UniRef50_A1WVH9 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Halorhodospira halophila SL1|Rep: Deoxyribodipyrimidine
photo-lyase - Halorhodospira halophila (strain DSM 244 /
SL1) (Ectothiorhodospirahalophila (strain DSM 244 /
SL1))
Length = 477
Score = 35.1 bits (77), Expect = 2.4
Identities = 39/159 (24%), Positives = 59/159 (37%), Gaps = 1/159 (0%)
Frame = +3
Query: 171 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDP-NIKDKVGINRLRFLLQSLEDLDS 347
W R DLR+ D AL A AE L P+Y P + VG +L SL LD+
Sbjct: 7 WLRRDLRLADQPALARAAQTAER----LAPVYIHAPAETRPTVGAASCWWLHHSLAALDA 62
Query: 348 NLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFI 527
L + L + G + + L + C +P QQ+ + + GV +
Sbjct: 63 ELASAGSRLCLDTGPSAERLCHWAQVSDAAVVYCTAIAEPWARQQEAAVAEALAAIGVRL 122
Query: 528 NKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVK 644
+ D V N P Y+ F +S+ +
Sbjct: 123 EVLADGLLTDPSAV--RNRSGTP--YRAFTPFWRSVRAQ 157
>UniRef50_A0L6R4 Cluster: Deoxyribodipyrimidine photo-lyase; n=4;
Proteobacteria|Rep: Deoxyribodipyrimidine photo-lyase -
Magnetococcus sp. (strain MC-1)
Length = 476
Score = 35.1 bits (77), Expect = 2.4
Identities = 36/139 (25%), Positives = 65/139 (46%)
Frame = +3
Query: 159 TVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLED 338
TVI WFR DLR+ DN AL A + + P+Y + N ++ G L Q+L
Sbjct: 7 TVIVWFRRDLRLSDNPALLAATAMGQ-----VLPVYIHENNQQEGGGGAWRWGLQQALAA 61
Query: 339 LDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 518
L+++L+ C YV G LLP++ + P+ +++D I+ ++G
Sbjct: 62 LNADLQG-KLCCYV--GDPARLLPEVAHAVGATGVYWNRLYTPQAIKRDRAIKQSLIERG 118
Query: 519 VFINKRVQHTVYDVHKVLR 575
+ + +++ +VL+
Sbjct: 119 LQVRSFNGSLLWEPWQVLK 137
>UniRef50_Q42696 Cluster: CPH1; n=4; Viridiplantae|Rep: CPH1 -
Chlamydomonas reinhardtii
Length = 1008
Score = 35.1 bits (77), Expect = 2.4
Identities = 45/185 (24%), Positives = 73/185 (39%), Gaps = 3/185 (1%)
Frame = +3
Query: 159 TVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLR--FLLQSL 332
T + WFR DLR+ DN AL A+ A N + P++ P + + R + SL
Sbjct: 7 TAVVWFRRDLRVDDNPALVAALAAAPN----VIPVFIWAPEEEGQFQPGRCSRWWSKHSL 62
Query: 333 EDLDSNLKKLNTCLYVLRG-KAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAE 509
DL L L + L + R + L +L + + + DP + +D +
Sbjct: 63 VDLQQALAALGSRLVIRRSTDSTAALLQLVTELGAEAVFFNHLYDPISLMRDHDCKRGLT 122
Query: 510 KKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEISNVLSSHCKP 689
GV +Y+ VL N T+ F + V+++ V P +S S P
Sbjct: 123 AAGVAHRTFNGDMLYEPWDVLDPNKQPYS-TFDDFWNSVRAMPVPPPFPVSAPASMPAVP 181
Query: 690 IDIQS 704
+ S
Sbjct: 182 AAVPS 186
>UniRef50_A5K9M1 Cluster: Deoxyribodipyrimidine photolyase,
putative; n=1; Plasmodium vivax|Rep:
Deoxyribodipyrimidine photolyase, putative - Plasmodium
vivax
Length = 973
Score = 35.1 bits (77), Expect = 2.4
Identities = 24/93 (25%), Positives = 44/93 (47%)
Frame = +3
Query: 183 DLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEDLDSNLKKL 362
D R +DN AL A A+ + L +L N K+K+ + L+ L++L+ LK++
Sbjct: 500 DFRANDNWALTYAYELAKKKGLNLIACTYL--NRKEKLTSRFINAKLKVLKNLEQALKQM 557
Query: 363 NTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDI 461
N Y+L +D + +K + C + +
Sbjct: 558 NIPFYILPLFMIDEFKEFIKTHHIKVIACDLHV 590
>UniRef50_Q834P4 Cluster: Deoxyribodipyrimidine photolyase; n=14;
Bacilli|Rep: Deoxyribodipyrimidine photolyase -
Enterococcus faecalis (Streptococcus faecalis)
Length = 477
Score = 34.7 bits (76), Expect = 3.1
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = +3
Query: 171 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEDLDSN 350
WFR DLR+ DN AL +A+ + + +L ++ ++P + N F SL
Sbjct: 6 WFRRDLRLQDNKALAHALQNSAADELIL--LFQMNPQQFIQESANHNAF-FASLASFKER 62
Query: 351 LKKLNTCLYVLRGKAVDLLPKL---FDDWQVKY 440
+ + L ++ G+ +DL +L DWQ Y
Sbjct: 63 IDQ-EAHLQIMVGEPLDLFSRLKRKLPDWQAIY 94
>UniRef50_Q2BJV5 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Neptuniibacter caesariensis|Rep: Deoxyribodipyrimidine
photolyase - Neptuniibacter caesariensis
Length = 468
Score = 34.7 bits (76), Expect = 3.1
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Frame = +3
Query: 171 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDP---NIKDKVGINRLRFLLQSLEDL 341
WFR DLR D+ AL A +N + + + P I+D+ +R++F +LE L
Sbjct: 5 WFRNDLRTGDHHALYQAC--MDNTGEGVLGVAIITPVQWKIQDE-SKSRVQFWRANLESL 61
Query: 342 DSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEF 473
+L+ LN L +LR + +P L + +Y V + E+
Sbjct: 62 SCDLQSLNIPLLILRVPSNREIPALLVELAKRYQVSGVYFNREY 105
>UniRef50_Q0APK4 Cluster: Deoxyribodipyrimidine photo-lyase; n=2;
Rhodobacterales|Rep: Deoxyribodipyrimidine photo-lyase -
Maricaulis maris (strain MCS10)
Length = 499
Score = 34.7 bits (76), Expect = 3.1
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Frame = +3
Query: 147 SKTATVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLR--FL 320
S TA + WFR DLR+HDN AL A+ L + DP+ ++ R +L
Sbjct: 5 SATAAALVWFRRDLRLHDNPALWAAVRSGRP----LVCAFIDDPDAVAQLAPGRASRWWL 60
Query: 321 LQSLEDLDSNLKKLNTCLYVLRGKAVDLLPKL 416
SL L ++++ L + RG L +L
Sbjct: 61 HHSLAALSRSIRQRGGQLVLRRGDTTSELVRL 92
>UniRef50_Q15TU1 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Pseudoalteromonas atlantica T6c|Rep:
Deoxyribodipyrimidine photolyase - Pseudoalteromonas
atlantica (strain T6c / BAA-1087)
Length = 481
Score = 34.3 bits (75), Expect = 4.1
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 2/116 (1%)
Frame = +3
Query: 171 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGI--NRLRFLLQSLEDLD 344
W R DLR N A+ A++ +N + +YF D + +++ + Q L +L
Sbjct: 6 WLRTDLRSKWNSAIDYAVDNHDN----VTAVYFTTKEQWDTYNLSSHKVALIYQRLVNLH 61
Query: 345 SNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEK 512
L + N L V+ G +P D K V + E+ + DE D+A K
Sbjct: 62 KELAERNIELQVIEGSIYQAIPVRLKDICTKIGVTHVYCNAEY-EWDERQRDLAVK 116
>UniRef50_A6LRL4 Cluster: ATP-dependent protease; n=1; Clostridium
beijerinckii NCIMB 8052|Rep: ATP-dependent protease -
Clostridium beijerinckii NCIMB 8052
Length = 768
Score = 34.3 bits (75), Expect = 4.1
Identities = 20/63 (31%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Frame = +3
Query: 354 KKLN-TCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDI--DPEFVQQDEYIEDIAEKKGVF 524
++LN T L++ GK ++L ++ DD + KY C V+ ++++ IE+I+EK+ +
Sbjct: 89 EQLNPTALFLPNGKG-NILKEMIDDIKEKYFECIVEFYNSSSDEEKEDIIEEISEKRNNY 147
Query: 525 INK 533
I K
Sbjct: 148 ITK 150
>UniRef50_A3X5Z0 Cluster: Deoxyribodipyrimidine photolyase; n=3;
Alphaproteobacteria|Rep: Deoxyribodipyrimidine
photolyase - Roseobacter sp. MED193
Length = 502
Score = 34.3 bits (75), Expect = 4.1
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +3
Query: 171 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLR--FLLQSLEDLD 344
WF+ DLR D+ AL A + P+Y ++P++ + + + F+ ++L +L
Sbjct: 5 WFKRDLRCSDHAALTRAAQVGP-----VLPLYVVEPDLWQQPDASHRQWCFVAETLAELR 59
Query: 345 SNLKKLNTCLYVLRGKAVDLLPKL 416
+LK L V +G V++L L
Sbjct: 60 DDLKLRGQPLVVRQGSVVEILEGL 83
>UniRef50_Q6MDF3 Cluster: Putative photolyase; n=1; Candidatus
Protochlamydia amoebophila UWE25|Rep: Putative
photolyase - Protochlamydia amoebophila (strain UWE25)
Length = 471
Score = 33.9 bits (74), Expect = 5.5
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 2/121 (1%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIY--FLDPNIKDKVGINRLRFLLQSLED 338
I WFR D R+ DN AL N A + + P++ +P + ++G +L SL
Sbjct: 6 IVWFRQDFRLEDNPAL----NAATQKGGPVIPVFNWVFNPEKEWQLGGASQWWLYYSLIS 61
Query: 339 LDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 518
L ++L +L L + + + L ++ + + +P +Q D I+ +K+G
Sbjct: 62 LKNDLSELGLSLIIRKEDPLKSLLEIAHETGADTVYWNRRYEPMLIQDDAKIKTELQKQG 121
Query: 519 V 521
+
Sbjct: 122 I 122
>UniRef50_Q8GFD6 Cluster: MobX; n=1; Enterococcus faecalis|Rep: MobX
- Enterococcus faecalis (Streptococcus faecalis)
Length = 224
Score = 33.9 bits (74), Expect = 5.5
Identities = 18/82 (21%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +3
Query: 405 LPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFINKRVQ---HTVYDVHKVLR 575
+P+L +W+ ++ T + D + + + E + +N+R+Q T+ +++L
Sbjct: 22 IPQLISEWEQQFQTLSTNFDKQQKHHQNELSEKIENELKHLNRRIQDQLDTLISQNQILH 81
Query: 576 ENNGAVPLTYQKFLSL-VKSIN 638
+N + Y+ +L VK IN
Sbjct: 82 HDNQVLLSDYENYLDKHVKEIN 103
>UniRef50_Q6WS77 Cluster: Type II CPD DNA photolyase; n=2;
Euphyllophyta|Rep: Type II CPD DNA photolyase -
Pityrogramma austroamericana
Length = 546
Score = 33.9 bits (74), Expect = 5.5
Identities = 24/83 (28%), Positives = 37/83 (44%)
Frame = +3
Query: 162 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEDL 341
V++W D R DN AL A A+ + L + L + F+L+ L +
Sbjct: 41 VVYWMSRDQRSRDNWALLYAAQCAQQQGGPLCVAFNLVDSFLHAEA-RHFGFMLRGLRVV 99
Query: 342 DSNLKKLNTCLYVLRGKAVDLLP 410
NL L ++LRGKA + +P
Sbjct: 100 HHNLSSLGIPFFLLRGKAEENIP 122
>UniRef50_A2ZFJ6 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 893
Score = 33.9 bits (74), Expect = 5.5
Identities = 34/105 (32%), Positives = 46/105 (43%)
Frame = +3
Query: 252 LRPIYFLDPNIKDKVGINRLRFLLQSLEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQ 431
L PI L+ K VG L + L D LK L VLR KAV + ++
Sbjct: 177 LTPIQLLEETEK-AVGFPDLPVQHRQLIDRSKQLKNLEVMSLVLRSKAVKQKEQTLNN-- 233
Query: 432 VKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHK 566
+K L ++ D E VQQ D KK + KR+Q Y++ K
Sbjct: 234 LKALNAELKEDVERVQQ----RDKLMKKVDLMRKRLQWLKYEMKK 274
>UniRef50_Q5QGR3 Cluster: Alanyl-tRNA synthetase; n=2;
Entamoeba|Rep: Alanyl-tRNA synthetase - Entamoeba
moshkovskii
Length = 606
Score = 33.9 bits (74), Expect = 5.5
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = -1
Query: 763 VLMFLHQFVIPLNWVYYSLPDCISIGLQWLDKTLDISIGSFTLM 632
+++ L F P +VY+ +C+ L+WL K L+I++ TL+
Sbjct: 40 IMIGLQVFNSPQKYVYFK-EECVDYNLRWLTKELEINVDDITLI 82
>UniRef50_Q18K78 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Halobacteriaceae|Rep: Deoxyribodipyrimidine photolyase -
Haloquadratum walsbyi (strain DSM 16790)
Length = 719
Score = 33.9 bits (74), Expect = 5.5
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Frame = +3
Query: 171 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGI---NRLRFLLQSLEDL 341
W R LR D+ AL +A+ +A+ ++ P++ DP D G+ R+RFL ++++ L
Sbjct: 48 WHRKHLRTADHRALADAVADAD----IICPLFVFDPTFYDNDGLACDARIRFLHEAVDSL 103
Query: 342 D 344
+
Sbjct: 104 N 104
>UniRef50_Q8F9A2 Cluster: Purine NTPase, putative; n=4;
Leptospira|Rep: Purine NTPase, putative - Leptospira
interrogans
Length = 771
Score = 33.5 bits (73), Expect = 7.2
Identities = 34/136 (25%), Positives = 68/136 (50%), Gaps = 1/136 (0%)
Frame = +3
Query: 303 NRLRFLLQSLEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTC-QVDIDPEFVQ 479
++ R L + L+ LD+ LKKLNT + V + DLLP+ D + L+ + +++ ++
Sbjct: 558 SKKRELEKELQSLDNELKKLNTAIQVEDARIQDLLPEKEKDLKDTILSLFEKELEFSKIE 617
Query: 480 QDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSINVKEPIEI 659
IA++ I+K Q T + + + E + L K ++++I+ K+ I++
Sbjct: 618 SKRKSAKIAQELFEEISKD-QSTQFVL--IASEIGKEIDLLLPKRSVILEAIDKKDSIKM 674
Query: 660 SNVLSSHCKPIDIQSG 707
+ + + ID SG
Sbjct: 675 QDEAGTF-RSIDHLSG 689
>UniRef50_Q8F5M3 Cluster: Polysaccharide biosynthesis protein; n=8;
Leptospira|Rep: Polysaccharide biosynthesis protein -
Leptospira interrogans
Length = 447
Score = 33.5 bits (73), Expect = 7.2
Identities = 22/96 (22%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = -3
Query: 755 VSSSICNSFKLGIL*FTGLYINWLAVAR*DIRYFYWFLYINAL--Y*RKKLLIREWYSSI 582
+S+S G+ + G + + + R D +W +++ L R +I+ WY +
Sbjct: 89 ISTSFLLQLIAGVFAYGGAIL-LIPILRPDESDLFWMVFLVGLTLIFRSVGVIKYWYEAQ 147
Query: 581 VLSQNFMYIINCMLYSLVNEYTFLLSNVFNVFILLY 474
VLS+ F+++ N + + L+ N F VF ++
Sbjct: 148 VLSKYFVWLENGLFFVFSGVRILLILNGFGVFAFIW 183
>UniRef50_Q0VRI4 Cluster: DNA photolyase; n=1; Alcanivorax
borkumensis SK2|Rep: DNA photolyase - Alcanivorax
borkumensis (strain SK2 / ATCC 700651 / DSM 11573)
Length = 484
Score = 33.5 bits (73), Expect = 7.2
Identities = 30/129 (23%), Positives = 58/129 (44%), Gaps = 10/129 (7%)
Frame = +3
Query: 171 WFRLDLRIHDNLALRNAINEAENRKHLLRP----IYFLDPNIKDKVGINRLR--FLLQSL 332
W+R DLR+ + L A+ E+ RP +Y L D+ + LR ++L+SL
Sbjct: 5 WYRNDLRVAAHSPLHAALTESSISAGETRPQALAVYCLCQGQWDRHQVAPLRRWYVLESL 64
Query: 333 EDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQ----VKYLTCQVDIDPEFVQQDEYIED 500
+L +L L+VL + +P+ ++ V +L C + Q+D + +
Sbjct: 65 RELGESLANRGIDLHVLDVDTFEKVPEALAEFAQSQGVTHLYCNREYPLNEKQRDTLVAE 124
Query: 501 IAEKKGVFI 527
++G+ +
Sbjct: 125 RLREQGIIL 133
>UniRef50_A0JYK6 Cluster: Deoxyribodipyrimidine photo-lyase; n=11;
Bacteria|Rep: Deoxyribodipyrimidine photo-lyase -
Arthrobacter sp. (strain FB24)
Length = 474
Score = 33.5 bits (73), Expect = 7.2
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +3
Query: 159 TVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLD---PNIKDKVGINRLRFLLQS 329
+ I W R DLR+ DN AL +A H L +Y LD P ++ G + +L S
Sbjct: 3 STIVWLRDDLRLDDNPALA----DAAAMGHPLTVVYILDEESPGVRPLGGAAKW-WLHHS 57
Query: 330 LEDLDSNLKKLNTCLYVLRGKAVDLLPKL 416
L L L+ + L + RG A ++ +L
Sbjct: 58 LVSLAGGLEAAGSRLVLRRGSAAGIIQEL 86
>UniRef50_Q8IKQ2 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 503
Score = 33.5 bits (73), Expect = 7.2
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 6/184 (3%)
Frame = +3
Query: 135 KXKMSKTATVIHWFRLDLRIHDNLALRN---AINEAENRKHLLRPIYFLDPNIKDKVGIN 305
K K +T I+ L+ +I+ ++N + + EN KH I + + +
Sbjct: 3 KKKKKRTPKPINLNELEEKINILNFMKNDFEIVLQKENEKHSEVSIQYTNKEESSTLERE 62
Query: 306 RLRFLLQSLEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQD 485
R+ +L+ L + N KK + Y+ K D++ K + + + + DID +Q+D
Sbjct: 63 RINIILKELI-ISCNEKKEHLNNYIKVAK--DIIQKNNETIEKE----KNDIDKLILQKD 115
Query: 486 EYIEDIAEKKGVFINKRVQHTVYDVHKVLRE--NNGAVPLTYQKFLSL-VKSINVKEPIE 656
E I+D+ EKK V VQ+ D++K + + NN V L + +++ +K +N K IE
Sbjct: 116 EQIKDV-EKKIVI----VQNFYKDINKGIIQLINNLEVYLRNKMNINIDIKKMNDK-TIE 169
Query: 657 ISNV 668
++NV
Sbjct: 170 LTNV 173
>UniRef50_Q7RTE9 Cluster: Streptococcus pyogenes AMV258, putative;
n=3; Plasmodium (Vinckeia)|Rep: Streptococcus pyogenes
AMV258, putative - Plasmodium yoelii yoelii
Length = 832
Score = 33.5 bits (73), Expect = 7.2
Identities = 33/142 (23%), Positives = 64/142 (45%), Gaps = 1/142 (0%)
Frame = +3
Query: 264 YFLDPNIKDKVGINRLRFLLQSLEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYL 443
YF PN K+ +G ++ L + D+ L K N +Y + V+ L D +
Sbjct: 19 YFYIPN-KNDIGKLSIKNLGKYSLDI-IRLSKSNNDIYEIFKTRVNSEITLLDGKDCYRI 76
Query: 444 TCQVDIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGA-VPLTYQKFLS 620
++I+ + +++E+I+++ K + K + D+ + + N +PL L+
Sbjct: 77 IKSLEINNKLDEKEEFIKNLLNKISIESCKYSIKEICDICFLCSKLNLLFIPLFASLSLA 136
Query: 621 LVKSINVKEPIEISNVLSSHCK 686
+ IN+ P IS + S CK
Sbjct: 137 FLNKINLATPENISTICLSFCK 158
>UniRef50_Q9HQ46 Cluster: Deoxyribodipyrimidine photo-lyase; n=5;
Halobacteriaceae|Rep: Deoxyribodipyrimidine photo-lyase
- Halobacterium salinarium (Halobacterium halobium)
Length = 481
Score = 33.5 bits (73), Expect = 7.2
Identities = 30/124 (24%), Positives = 47/124 (37%), Gaps = 5/124 (4%)
Frame = +3
Query: 165 IHWFRLDLRIHDNLALRNAIN--EAENRKHLLRPI---YFLDPNIKDKVGINRLRFLLQS 329
+ W R DLR DN L A A + H P+ + D + R+ F+L +
Sbjct: 3 LFWHRRDLRTTDNRGLAAAAPGVTAVDGGHDQGPVAAVFCFDDEVLAHAAPPRVAFMLDA 62
Query: 330 LEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAE 509
L L + L + L V G +LP + +D + D +D + D +
Sbjct: 63 LAALRERYRDLGSDLIVRHGDPAAVLPAVANDLDATRVVWNHDYSGLATDRDAGVRDALD 122
Query: 510 KKGV 521
GV
Sbjct: 123 AAGV 126
>UniRef50_UPI00006CBFCE Cluster: TPR Domain containing protein; n=4;
Tetrahymena thermophila SB210|Rep: TPR Domain containing
protein - Tetrahymena thermophila SB210
Length = 790
Score = 33.1 bits (72), Expect = 9.5
Identities = 22/75 (29%), Positives = 34/75 (45%)
Frame = +3
Query: 417 FDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVP 596
F D + +Y Q+++ PE Q DE I+ +K + R H Y V K + ++
Sbjct: 94 FKDGEFRYNGQQIEVPPE--QYDEVIQLFQDKGIKDVTIRKGHVSYKVAKNIAKSGTIEG 151
Query: 597 LTYQKFLSLVKSINV 641
LTY + INV
Sbjct: 152 LTYDTVTGIKMGINV 166
>UniRef50_Q6KHM8 Cluster: Hypothetical membrane protein; n=1;
Mycoplasma mobile|Rep: Hypothetical membrane protein -
Mycoplasma mobile
Length = 268
Score = 33.1 bits (72), Expect = 9.5
Identities = 23/69 (33%), Positives = 38/69 (55%)
Frame = -1
Query: 814 IIQTFKSFCFTNHDISQVLMFLHQFVIPLNWVYYSLPDCISIGLQWLDKTLDISIGSFTL 635
II+T + F H I +++ F FV+ L ++ Y D I+ GL+ +DK L F L
Sbjct: 144 IIET-EHLSFGKHTIKEII-FQFFFVVSLGFIGYL--DVITYGLEVIDKVLITLTIIFIL 199
Query: 634 MLFTNERNF 608
+L +++ NF
Sbjct: 200 LLISSKFNF 208
>UniRef50_Q2SRL8 Cluster: Membrane protein, putative; n=1;
Mycoplasma capricolum subsp. capricolum ATCC 27343|Rep:
Membrane protein, putative - Mycoplasma capricolum
subsp. capricolum (strain California kid / ATCC27343 /
NCTC 10154)
Length = 583
Score = 33.1 bits (72), Expect = 9.5
Identities = 25/97 (25%), Positives = 47/97 (48%)
Frame = +3
Query: 324 QSLEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDI 503
+S D D N+KK+ T VL V + F + Y + ++ + ++ + I+ +
Sbjct: 245 ESYTDSDGNIKKV-TKTQVLTASVVKPFVE-FSHYSRIYFATDLALNLQLYRKPQQIDKL 302
Query: 504 AEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKF 614
EK+ +K V+ T ++HK ++N PL+ KF
Sbjct: 303 TEKEK---DKLVRKTEKELHKYSQKNLNFTPLSNTKF 336
>UniRef50_A2ELU8 Cluster: Dihydroorotate dehydrogenase family
protein; n=3; Trichomonas vaginalis G3|Rep:
Dihydroorotate dehydrogenase family protein -
Trichomonas vaginalis G3
Length = 811
Score = 33.1 bits (72), Expect = 9.5
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +3
Query: 375 YVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVY 554
Y+ DL KL ++K L QV I PE +QD I +AE +G+ + VQ +
Sbjct: 675 YLYSWSRPDLRAKLSHYTEMKTLPIQVPI-PEDTKQDRKIPTLAELRGLGAKRVVQRESF 733
Query: 555 DVHKVL 572
D++ L
Sbjct: 734 DINWTL 739
>UniRef50_A2DFS8 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 859
Score = 33.1 bits (72), Expect = 9.5
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +3
Query: 465 PEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQ-KFLSLVKSINV 641
PE++ +Y+E +A+KK ++ +Q ++V + N P+ Y+ KF SL+KS+ +
Sbjct: 457 PEYLALTQYVEFVAKKK----SRPIQQDCFNV-IAIHATNTESPIEYEPKFSSLLKSLTM 511
Query: 642 KEPI 653
K I
Sbjct: 512 KGAI 515
>UniRef50_A7EMR0 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 1609
Score = 33.1 bits (72), Expect = 9.5
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +3
Query: 408 PKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNG 587
P FD WQ+ TC+ +D F QD E ++K + + +R+ + VY + + NG
Sbjct: 244 PAHFDSWQLMGFTCRAIVDLGF-HQDPPGEQQPDRKALDMRRRIFYCVYSLDSQDQIFNG 302
Query: 588 A 590
+
Sbjct: 303 S 303
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 689,488,006
Number of Sequences: 1657284
Number of extensions: 12900587
Number of successful extensions: 33799
Number of sequences better than 10.0: 170
Number of HSP's better than 10.0 without gapping: 32385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33720
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78292544701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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