Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_K06
(877 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAP7G5.02c |gua2||GMP synthase [glutamine-hydrolyzing] |Schizos... 29 1.1
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 28 1.5
SPBC342.06c |rtt109|kat11|RTT109 family histone lysine acetyltra... 27 4.6
SPBC1703.02 |rsc9||RSC complex subunit Rsc9|Schizosaccharomyces ... 27 4.6
SPCC74.03c |ssp2|ucp9|serine/threonine protein kinase Ssp2|Schiz... 26 6.1
SPCC1259.02c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|... 26 8.1
SPAC2G11.11c |prh1||ATP-dependent RNA helicase Prh1|Schizosaccha... 26 8.1
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 26 8.1
>SPAP7G5.02c |gua2||GMP synthase [glutamine-hydrolyzing]
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 539
Score = 28.7 bits (61), Expect = 1.1
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 453 VDIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFL--SLV 626
VD EF+ + + + D +K+ + N + + ++++E NG V Q L ++
Sbjct: 297 VDASEEFIGKLKGVTDPEKKRKIIGNTFIHVFEREAERIVKETNGKVEYLLQGTLYPDVI 356
Query: 627 KSINVKEP 650
+SI+ K P
Sbjct: 357 ESISFKGP 364
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +3
Query: 417 FDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVP 596
F DWQ C I+ + ++ Y+ D +E++ + + +++ H V+R V
Sbjct: 147 FSDWQSLVSYCCQAIEKLSIAEETYVSD-SEEEPISQKNYQEISIWKSHDVIRVKQEVVE 205
Query: 597 LTY 605
L Y
Sbjct: 206 LIY 208
>SPBC342.06c |rtt109|kat11|RTT109 family histone lysine
acetyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 369
Score = 26.6 bits (56), Expect = 4.6
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +3
Query: 219 AINEAENRKH--LLRPIYFLDPNIKDKVGINRLRFLLQSLEDLDSNLKKLNTCLYVLRGK 392
A N++E +K+ LL Y P G+ +R L + ++SN + GK
Sbjct: 163 APNDSEKQKNSTLLPKAYLFVP------GLENIRSYLPNRHWIESNA--------ITTGK 208
Query: 393 AVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKK 515
AV+ LP+ DD + +YL C++ + + +E+ + + ++
Sbjct: 209 AVEELPRFPDDPKCRYL-CELQDEKSDMSVEEFWDTLTYRQ 248
>SPBC1703.02 |rsc9||RSC complex subunit Rsc9|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 780
Score = 26.6 bits (56), Expect = 4.6
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +3
Query: 180 LDLRIHDNLALRNAINEAENRKHLLRP---IYFLDPNIKDKVGINRLRFLLQSLE 335
+D I L LRN++ EN KH+ + I L+ +I+ N L FL L+
Sbjct: 313 MDRAIGIALVLRNSVLSVENAKHVAQTKLVISVLEASIRCAKTFNNLEFLHYCLD 367
>SPCC74.03c |ssp2|ucp9|serine/threonine protein kinase
Ssp2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 576
Score = 26.2 bits (55), Expect = 6.1
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Frame = +3
Query: 333 EDLDSNLKKLNTCLYV----LRGKAVDLLPKLFDDWQVKYLTCQ-VDIDPEF-VQQDEYI 494
E + + KK+N+C+YV L A L+ ++ ++ +T Q + DP F V +Y+
Sbjct: 234 EFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNLPDYL 293
Query: 495 EDIAEKKGVFINKRV 539
+ E +G + + R+
Sbjct: 294 RPMEEVQGSYADSRI 308
>SPCC1259.02c |||aminopeptidase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 822
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 787 FTNHDISQVLMFLHQFVIPLNWVYYSLPDCISIGLQW 677
FT I+QV+ FVIP W Y L + + G+ W
Sbjct: 391 FTVALIAQVISIAGIFVIPNIWAYI-LGNVLDCGMSW 426
>SPAC2G11.11c |prh1||ATP-dependent RNA helicase
Prh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 719
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 522 FINKRVQHTVYDVHKVLREN 581
FIN+R T+ D+ K LRE+
Sbjct: 598 FINRRALKTILDIRKQLREH 617
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 25.8 bits (54), Expect = 8.1
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = +3
Query: 213 RNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEDLDSNLKKLNTCLYVLRGK 392
RN++ + E K L+ I D +++ L+QSL + LK L T K
Sbjct: 1451 RNSVLQTEFEKINLKLKEATKSGILDNKDLSKFSELIQSLLKENEELKNLTTSNLGSDDK 1510
Query: 393 AVDLLPKLFD 422
+D P L D
Sbjct: 1511 MLDFAPLLED 1520
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,053,530
Number of Sequences: 5004
Number of extensions: 62291
Number of successful extensions: 153
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 153
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 438479610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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