Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_K06
         (877 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...   133   8e-33
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    95   2e-21
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          24   5.3  

>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score =  133 bits (321), Expect = 8e-33
 Identities = 63/160 (39%), Positives = 99/160 (61%), Gaps = 2/160 (1%)
 Frame = +3

Query: 165 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLRFLLQSLED 338
           +HWFR  LR+HDN ALR  +  A       R ++ +DP       VGIN+ RFLLQ L+D
Sbjct: 7   VHWFRKGLRLHDNPALREGLRGART----FRCVFIIDPWFAGSSNVGINKWRFLLQCLDD 62

Query: 339 LDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 518
           LD NL+KLN+ L+V+RG+  D LPKLF +W    LT + D +P    +D  I ++ ++ G
Sbjct: 63  LDRNLRKLNSRLFVIRGQPADALPKLFKEWGTTCLTFEEDPEPFGRVRDHNISEMCKELG 122

Query: 519 VFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSIN 638
           + +     HT+Y++ +++ +N G  PLTY +F +++ S++
Sbjct: 123 IEVISAASHTLYNLERIIEKNGGRAPLTYHQFQAIIASMD 162


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 95.5 bits (227), Expect = 2e-21
 Identities = 58/167 (34%), Positives = 90/167 (53%), Gaps = 6/167 (3%)
 Frame = +3

Query: 153 TATVIHWFRLDLRIHDNLALRNAI-NEAENRKH---LLRPIYFLDPNIKDK--VGINRLR 314
           T   I WFR  LR+HDN +L  A+ ++  N+      L PI+  D        VG NR++
Sbjct: 2   TINNILWFRHGLRLHDNPSLLEALKSDCVNQSSEAVKLFPIFIFDGESAGTRIVGYNRMK 61

Query: 315 FLLQSLEDLDSNLKKLNTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYI 494
           FLL+SL DLD   + L   L V RG +V +L +LF++  +K L  + D +P + ++D+ +
Sbjct: 62  FLLESLADLDRQFRDLGGQLLVFRGDSVTVLRRLFEELNIKKLCYEQDCEPIWKERDDAV 121

Query: 495 EDIAEKKGVFINKRVQHTVYDVHKVLRENNGAVPLTYQKFLSLVKSI 635
             +     V   + V HT+++  +V++ N    PLTYQ FL  V  I
Sbjct: 122 AKLCRTMDVRCVENVSHTLWNPIEVIQTNGDIPPLTYQMFLHTVNII 168


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +3

Query: 447 CQVDIDPEFVQQDEYIEDIAEKKGVFINKRVQH 545
           C+ +I   F + DEY +++ ++  +F    V H
Sbjct: 422 CKNNIKIRFYELDEYDQEVWQEMAIFSEADVHH 454


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 758,438
Number of Sequences: 2352
Number of extensions: 14702
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93853377
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)