Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_K02
         (863 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5TWK7 Cluster: ENSANGP00000027942; n=1; Anopheles gamb...    35   2.3  
UniRef50_Q55F72 Cluster: Small MutS related (Smr) family protein...    35   2.3  
UniRef50_A4BG77 Cluster: Acriflavin resistance protein; n=1; Rei...    35   3.1  
UniRef50_A0E8T6 Cluster: Chromosome undetermined scaffold_83, wh...    35   3.1  
UniRef50_A2WMM3 Cluster: Putative uncharacterized protein; n=2; ...    34   5.3  
UniRef50_Q4UHR0 Cluster: DNA replication licensing factor (MCM5 ...    34   5.3  
UniRef50_Q4HQ14 Cluster: Putative uncharacterized protein; n=1; ...    33   7.1  
UniRef50_Q6MCK1 Cluster: Putative uncharacterized protein; n=2; ...    33   9.3  

>UniRef50_Q5TWK7 Cluster: ENSANGP00000027942; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000027942 - Anopheles gambiae
           str. PEST
          Length = 414

 Score = 35.1 bits (77), Expect = 2.3
 Identities = 17/63 (26%), Positives = 34/63 (53%)
 Frame = +1

Query: 343 QDTEQLVCWECLAIMRKFLKFKWQVHNAQEHLKVKGLNQSQETLDHTYLPQPLSSLDVSS 522
           ++  + VC EC   +RKF  +  +V N Q +L+ +    S+ ++  T L +P+ + D  +
Sbjct: 14  EELPKFVCTECSITVRKFYNYTLEVQNTQSYLERECNVASKSSITITKL-EPIGNCDEEN 72

Query: 523 KCD 531
            C+
Sbjct: 73  DCN 75


>UniRef50_Q55F72 Cluster: Small MutS related (Smr) family protein;
           n=1; Dictyostelium discoideum AX4|Rep: Small MutS
           related (Smr) family protein - Dictyostelium discoideum
           AX4
          Length = 1025

 Score = 35.1 bits (77), Expect = 2.3
 Identities = 22/67 (32%), Positives = 33/67 (49%)
 Frame = +1

Query: 70  LKSIQENLAISNGSIAFCFDIEIINSKNPSFNKSYFQXKMEQDVDNNFKIICSTCLCGDR 249
           +K +Q N + SN S     DIE+  +KN  F+ S    ++  D D N K     C  G+ 
Sbjct: 187 MKGLQYNTSNSNSSYEPFRDIEVQKNKNQFFDASTEDPELSNDDDENKKQSDGGCGEGEG 246

Query: 250 KLFALNN 270
           K+  LN+
Sbjct: 247 KVVNLND 253


>UniRef50_A4BG77 Cluster: Acriflavin resistance protein; n=1;
           Reinekea sp. MED297|Rep: Acriflavin resistance protein -
           Reinekea sp. MED297
          Length = 1026

 Score = 34.7 bits (76), Expect = 3.1
 Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
 Frame = +1

Query: 685 VPEFVLGGPVSDVMSHIVVGTDELTTV-DEYENNIKTDGIPHLTMSPLTTTQ-EDTIVVK 858
           V EFV+  PV+DV+ +  +  DEL  + D+ E ++K+ GI  + ++ L T Q E T+ V+
Sbjct: 124 VEEFVIFDPVADVLLYGDLSLDELQQLTDDAERSLKSAGITKVDITGLPTRQLEATLPVE 183


>UniRef50_A0E8T6 Cluster: Chromosome undetermined scaffold_83, whole
           genome shotgun sequence; n=3; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_83,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 927

 Score = 34.7 bits (76), Expect = 3.1
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -2

Query: 844 CLLVLSLGDSLSNAVSHQFLYYFHTHRLLSTRQFPQR 734
           C L++SL + L+     QFLY F T  LLS  +  Q+
Sbjct: 360 CRLIISLSEGLAGLKKTQFLYQFRTENLLSNNRIKQQ 396


>UniRef50_A2WMM3 Cluster: Putative uncharacterized protein; n=2;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 286

 Score = 33.9 bits (74), Expect = 5.3
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -2

Query: 169 FY*NWGFLNLLFRYQNKKLYSHLKLPNFLE*ISNLI 62
           F+  W FLN++F   NKK+Y++   P F+  I  L+
Sbjct: 93  FFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLLV 128


>UniRef50_Q4UHR0 Cluster: DNA replication licensing factor (MCM5
           homologue), putative; n=2; Theileria|Rep: DNA
           replication licensing factor (MCM5 homologue), putative
           - Theileria annulata
          Length = 770

 Score = 33.9 bits (74), Expect = 5.3
 Identities = 22/103 (21%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
 Frame = +1

Query: 82  QENLAISNGSIAFCFDIE--IINSKNPSFNKSYFQXKMEQDVDNNFKIICSTCLCGDRKL 255
           Q+ ++IS   I    +    +I + NP+      Q K++  +D NF  +    + G    
Sbjct: 504 QQTISISKAGITTILNTRCSVIAAANPNLGNFTTQIKLDISIDLNFNFLILNLILGSYNN 563

Query: 256 FALNNTQEVYQIFRLLMFDFAGEAMGDSVQDTEQLVCWECLAI 384
           +  NN Q  ++   L  FD       +   + ++L+C   L++
Sbjct: 564 YQDNNEQHDFKTTILSRFDLIFMLKDNEDINHDKLLCKHILSL 606


>UniRef50_Q4HQ14 Cluster: Putative uncharacterized protein; n=1;
           Campylobacter upsaliensis RM3195|Rep: Putative
           uncharacterized protein - Campylobacter upsaliensis
           RM3195
          Length = 170

 Score = 33.5 bits (73), Expect = 7.1
 Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
 Frame = +1

Query: 178 QXKMEQDVDNNFKIICSTCLCGDRKLFALNNTQEVYQIFRLLMFDFA-GEAMGDSVQDTE 354
           Q K E D+DN  ++  S  +C +      +  +E YQ   L +F    G AMG++++  +
Sbjct: 39  QIKFE-DIDNMTEL--SEFVCNEYLNATTDEEREKYQDMMLTLFTVKFGVAMGEAMKK-Q 94

Query: 355 QLVCWECLAIMRKFLKFKWQVHNAQEHLK 441
            + C + + I   F + +W+V++ +EH K
Sbjct: 95  GITCPQDMDI-ELFKQARWEVNSNEEHFK 122


>UniRef50_Q6MCK1 Cluster: Putative uncharacterized protein; n=2;
           Bacteria|Rep: Putative uncharacterized protein -
           Protochlamydia amoebophila (strain UWE25)
          Length = 754

 Score = 33.1 bits (72), Expect = 9.3
 Identities = 23/88 (26%), Positives = 42/88 (47%)
 Frame = +1

Query: 595 NSEDVKSEHYDMVTAVRDNINLQIEDHILEVPEFVLGGPVSDVMSHIVVGTDELTTVDEY 774
           +S  V  E Y++V  +  ++NL + D +++ PEFV      D+  ++     ELT  D  
Sbjct: 560 DSSAVHPERYELVEQIAKDLNLSLRD-LIDHPEFV---AQIDLKKYMSASVGELTLKDIL 615

Query: 775 ENNIKTDGIPHLTMSPLTTTQEDTIVVK 858
           +   K    P  T  P  + +ED + ++
Sbjct: 616 QELKKPGRDPRATFEP-PSFREDILSIQ 642


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 830,523,289
Number of Sequences: 1657284
Number of extensions: 16479917
Number of successful extensions: 43270
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 41397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43261
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76652910257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)