Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_K02
         (863 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      25   1.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      25   1.0  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   2.3  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   2.3  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   7.1  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   7.1  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    22   7.1  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   9.4  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   9.4  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 733 YVTSHPTLVPPTRIQELPE 677
           +++SHP +V P   QELP+
Sbjct: 242 HLSSHPAIVTPGPKQELPD 260


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 733 YVTSHPTLVPPTRIQELPE 677
           +++SHP +V P   QELP+
Sbjct: 134 HLSSHPAIVTPGPKQELPD 152


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 211 FKIICSTCLCGDRKLFALNN 270
           F++I ++C C   K   LNN
Sbjct: 93  FQVILNSCFCDPAKWIRLNN 112



 Score = 22.2 bits (45), Expect = 5.4
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -3

Query: 246 VTTQACTADDFKVIVDVLLHF 184
           VT QA T   F V+  VLLHF
Sbjct: 164 VTLQAYTLHLFCVLYVVLLHF 184


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 211 FKIICSTCLCGDRKLFALNN 270
           F++I ++C C   K   LNN
Sbjct: 93  FQVILNSCFCDPAKWIRLNN 112



 Score = 22.2 bits (45), Expect = 5.4
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -3

Query: 246 VTTQACTADDFKVIVDVLLHF 184
           VT QA T   F V+  VLLHF
Sbjct: 164 VTLQAYTLHLFCVLYVVLLHF 184


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 103 NGSIAFCFDIEIINSK 150
           +G++  C D  +INSK
Sbjct: 352 DGTVRICLDARMINSK 367


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +1

Query: 70  LKSIQENLAISNGSIAFCFDIEIINSKNPSF 162
           L  + E   + N +   CF +++ N K P F
Sbjct: 508 LSVLTELRTLGNQNSEMCFSLKLKNKKLPPF 538


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/22 (27%), Positives = 15/22 (68%)
 Frame = +1

Query: 730 HIVVGTDELTTVDEYENNIKTD 795
           +++VG++    ++ Y  N++TD
Sbjct: 47  NLIVGSENCLVLNVYTKNLRTD 68


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -3

Query: 804 RYPISFYIIFILIDCCQLVSSHND 733
           ++ + FY  +++ D   +VS +ND
Sbjct: 126 QFGVGFYSAYLVADKVTVVSKNND 149


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 506 HWMSRQSVITTKYSSTSPLA 565
           H  +  S+ITT   S SPLA
Sbjct: 257 HGSNTSSLITTPSPSASPLA 276


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,817
Number of Sequences: 336
Number of extensions: 4380
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23789590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)