Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_K02
         (863 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0977 - 7717808-7717837,7718227-7718327,7718449-7718548,771...    34   0.17 
05_03_0110 + 8500204-8500460,8502544-8502612,8502725-8502790,850...    32   0.51 
12_02_0657 - 21605598-21606199,21606524-21606641                       32   0.68 
08_01_0418 - 3716226-3716279,3716531-3716581,3716656-3716751,371...    29   6.3  
06_03_1404 - 29928792-29929040,29929147-29929551,29930130-299302...    29   6.3  
08_01_0238 - 1988688-1988830,1988989-1989257,1989339-1989600,198...    28   8.4  
01_06_1579 + 38402868-38402894,38403394-38403582,38403817-384039...    28   8.4  

>01_01_0977 -
           7717808-7717837,7718227-7718327,7718449-7718548,
           7718706-7718822,7718913-7718990,7719980-7720058,
           7720184-7720249,7720373-7720441,7720890-7721188
          Length = 312

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -2

Query: 169 FY*NWGFLNLLFRYQNKKLYSHLKLPNFLE*ISNLI 62
           F+  W FLN++F   NKK+Y++   P F+  I  L+
Sbjct: 119 FFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLLV 154


>05_03_0110 +
           8500204-8500460,8502544-8502612,8502725-8502790,
           8502885-8502963,8504270-8504390,8504486-8504581,
           8505403-8505515,8505612-8505689,8507777-8507893,
           8508194-8508293,8508463-8508563,8509093-8509110
          Length = 404

 Score = 32.3 bits (70), Expect = 0.51
 Identities = 13/37 (35%), Positives = 24/37 (64%)
 Frame = -2

Query: 169 FY*NWGFLNLLFRYQNKKLYSHLKLPNFLE*ISNLIM 59
           F+  W FLN++F   NKK++ +   P F+  +S+L++
Sbjct: 105 FFFMWYFLNVIFNILNKKIFDYFPYPYFVS-VSHLLV 140


>12_02_0657 - 21605598-21606199,21606524-21606641
          Length = 239

 Score = 31.9 bits (69), Expect = 0.68
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +1

Query: 682 EVPEFVLGGPVSDVMSHIVVGT-DELTTVDEYENNIKTDGIPHLT 813
           ++  FVLGGP +D +SH  VG   ++  + EY  +   +G+ +LT
Sbjct: 188 DICSFVLGGPDADDLSHREVGVFYDVHRLGEYAESFVDEGLANLT 232


>08_01_0418 -
           3716226-3716279,3716531-3716581,3716656-3716751,
           3717037-3717194,3717303-3717417,3717511-3717564,
           3717843-3717950,3718494-3718583,3718818-3718856,
           3718993-3719172,3719264-3719576,3719659-3719834
          Length = 477

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +1

Query: 370 ECLAIMRKFLKFKWQVHNAQEHLKVKGLNQSQETLDHTYLPQPLSS-LDVSSKC 528
           E +A+  K +++  +VH  +EH+K K   + Q   D       LSS ++   KC
Sbjct: 344 EIMALDTKIIEWDGKVHEMEEHVKAKEKKKDQIVADENQKLAALSSEVEWKLKC 397


>06_03_1404 -
           29928792-29929040,29929147-29929551,29930130-29930280,
           29930363-29930501,29930578-29930743,29930826-29931041,
           29931142-29931323,29931412-29931538,29931974-29932112,
           29932227-29932353,29932501-29932612,29932704-29932784,
           29933330-29933483,29933569-29933689,29934003-29934045,
           29934356-29934460
          Length = 838

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 8/29 (27%), Positives = 19/29 (65%)
 Frame = -3

Query: 804 RYPISFYIIFILIDCCQLVSSHNDM*HHI 718
           ++ + FY ++++ D  +++S HND   H+
Sbjct: 222 QFGVGFYSVYLVADYVEVISKHNDDKQHV 250


>08_01_0238 -
           1988688-1988830,1988989-1989257,1989339-1989600,
           1989693-1989805,1990560-1990594,1990771-1990878,
           1992178-1992483
          Length = 411

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -1

Query: 467 SCDW-FSPLTFKCSCALCTCHLNFRNFLIIAKHSQQTS 357
           S  W F P T   +C LCT  LN   FL+I++ S  T+
Sbjct: 294 SASWNFPPFTLFLNC-LCTFILNMSVFLVISRTSALTA 330


>01_06_1579 +
           38402868-38402894,38403394-38403582,38403817-38403918,
           38404005-38405963,38406050-38406105,38406332-38406368
          Length = 789

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
 Frame = +1

Query: 64  LSLKSIQENLAISN-GSIAFCFDIEIINSKNPSFNKSYFQXKMEQDVDNNFKIICSTCLC 240
           LS  S++  +AI+N G+I F   + +++S +PS  ++     +   +D+N KI  ++   
Sbjct: 520 LSRHSLENRIAIANCGAIPFL--VSLLHSTDPSTQENAVTILLNLSLDDNNKIAIASAEA 577

Query: 241 GDRKLFAL 264
            +  +F L
Sbjct: 578 IEPLIFVL 585


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,988,155
Number of Sequences: 37544
Number of extensions: 438981
Number of successful extensions: 1023
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1023
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)