Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_J24
(902 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0752 - 27791126-27791167,27791792-27791863,27792771-277928... 50 3e-06
02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393 49 4e-06
12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666 49 6e-06
07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318 47 2e-05
05_01_0103 + 686770-687017,687120-687270 47 2e-05
03_06_0174 - 32141956-32141985,32143658-32144452,32147645-321477... 47 2e-05
03_06_0480 + 34218403-34218405,34219071-34219127,34220047-342203... 46 5e-05
03_06_0479 + 34217170-34217172,34217337-34217786 44 1e-04
10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378 40 0.002
02_03_0407 - 18675368-18675378,18676047-18676977,18677323-186773... 30 2.2
07_03_0561 + 19485218-19485242,19485323-19486467,19487354-194874... 30 2.9
02_05_0171 - 26441007-26441918 29 3.8
01_05_0597 - 23526705-23526749,23526794-23526905,23527068-235271... 29 3.8
>04_04_0752 -
27791126-27791167,27791792-27791863,27792771-27792855,
27792971-27793236,27794117-27794301,27794925-27795018,
27795193-27795284,27795401-27795539,27796101-27796385
Length = 419
Score = 50.0 bits (114), Expect = 3e-06
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +2
Query: 350 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL 466
T E +K K+F +SW PDT+KV+ KMLY+SS D K+ L
Sbjct: 340 TDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKREL 378
Score = 38.7 bits (86), Expect = 0.006
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +1
Query: 154 YEEXKXDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGGTGECRYGLFDFEY 330
++E K + R++ F I + +Q+ V+ +G+ Y+ F + ECRY +FDF++
Sbjct: 282 FQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMP---ASECRYAVFDFDF 338
Query: 331 T--HQCQ 345
CQ
Sbjct: 339 VTDENCQ 345
>02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393
Length = 158
Score = 49.2 bits (112), Expect = 4e-06
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = +2
Query: 350 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL 466
T E +K K+F +SW PDT++V+ KMLY+SS D K+ L
Sbjct: 95 TDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKREL 133
Score = 39.5 bits (88), Expect = 0.004
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +1
Query: 160 EXKXDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGGTGECRYGLFDFEYT- 333
E K + R++VF I ++ +Q+ V+ +G+ Y+ F L ECRY +FDF++
Sbjct: 39 ELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLP---ADECRYAVFDFDFVT 95
Query: 334 -HQCQ 345
CQ
Sbjct: 96 DENCQ 100
>12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666
Length = 145
Score = 48.8 bits (111), Expect = 6e-06
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +1
Query: 151 TYEEXKXDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGGTGECRYGLFDFE 327
T+ E + K HRYV+F I D+ K++ VE G ++ F++ L + +CRY ++DF+
Sbjct: 23 TFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPE---SDCRYAIYDFD 79
Query: 328 YT--HQCQ 345
+ CQ
Sbjct: 80 FVTEENCQ 87
Score = 38.3 bits (85), Expect = 0.008
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = +2
Query: 350 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL 466
T E +K K+F ++W P ++++ KMLY++S + ++ L
Sbjct: 82 TEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRREL 120
>07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318
Length = 145
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +2
Query: 350 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL 466
T E +K K+F SW PDTA+ + KMLY+SS D ++ L
Sbjct: 82 TDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRREL 120
Score = 38.7 bits (86), Expect = 0.006
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +1
Query: 154 YEEXKXDKKHRYVVFYIRDEK-QIDVETVGERNAEYEQFLEDLQKGGTGECRYGLFDFEY 330
++E K + R++VF I D+ +I VE +G+ YE F L ECRY ++D ++
Sbjct: 24 FQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATLP---ADECRYAVYDLDF 80
Query: 331 T--HQCQ 345
CQ
Sbjct: 81 VTDENCQ 87
>05_01_0103 + 686770-687017,687120-687270
Length = 132
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/39 (46%), Positives = 28/39 (71%)
Frame = +2
Query: 350 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL 466
T E +K K+F ++W PDT++V+ KM+Y+SS D K+ L
Sbjct: 69 TEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKREL 107
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = +1
Query: 160 EXKXDKKHRYVVFYIRDEKQ-IDVETVGERNAEYEQFLEDLQKGGTGECRYGLFDFEYT- 333
E K + +R++++ I ++K+ + VE VGE Y+ F L ECRY +FD+++
Sbjct: 13 ELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLP---ANECRYAIFDYDFVT 69
Query: 334 -HQCQ 345
CQ
Sbjct: 70 EENCQ 74
>03_06_0174 -
32141956-32141985,32143658-32144452,32147645-32147759,
32148134-32148399,32150193-32150213
Length = 408
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 151 TYEEXKXDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDLQKGGTGECRYGLFDFE 327
T+ E + K RYV+F I + +KQ+ VE G Y+ FL L + +CRY L+DF+
Sbjct: 23 TFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASLPEN---DCRYALYDFD 79
Query: 328 Y 330
+
Sbjct: 80 F 80
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/39 (43%), Positives = 28/39 (71%)
Frame = +2
Query: 350 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL 466
T E +K K+F ++W P T++++ KMLYS+S D +K+ L
Sbjct: 82 TGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQEL 120
>03_06_0480 +
34218403-34218405,34219071-34219127,34220047-34220312,
34220402-34220552
Length = 158
Score = 45.6 bits (103), Expect = 5e-05
Identities = 18/60 (30%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +1
Query: 154 YEEXKXDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGGTGECRYGLFDFEY 330
+ E + + HR++ F + ++ K+I V+ +G+R YE F L + G+CR+ ++DF++
Sbjct: 37 FNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLPE---GDCRFAIYDFDF 93
Score = 44.0 bits (99), Expect = 2e-04
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +2
Query: 350 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL 466
T+E K ++F + W PD AKV+ KMLY+SS + KK L
Sbjct: 95 TAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKEL 133
>03_06_0479 + 34217170-34217172,34217337-34217786
Length = 150
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +1
Query: 154 YEEXKXDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGGTGECRYGLFDFEY 330
++E + + HR+VVF I D +Q+ V+ VG R+A +++ L G CRY ++D ++
Sbjct: 18 FQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLPADG---CRYAVYDHDF 74
Query: 331 T 333
T
Sbjct: 75 T 75
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +2
Query: 329 TRTSARXTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL 466
T T+A + + K+F +SW P A V+ KM+Y+SS + KK L
Sbjct: 80 TATAAAGEGGEAPRSKIFFVSWSPAAADVRSKMVYASSNEGFKKEL 125
>10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378
Length = 153
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 160 EXKXDKKHRYVVFYIRDEK-QIDVETVGERNAEYEQFLEDLQKGGTGECRYGLFDFEY 330
E K K HRYV+F I D + +I VE G Y+ F L +CRY ++D ++
Sbjct: 32 ELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLP---ADDCRYAVYDLDF 86
Score = 31.1 bits (67), Expect = 1.3
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +2
Query: 365 KKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL 466
+K K+F +SW P ++++ K +Y+ S + + L
Sbjct: 93 RKSKIFFISWSPSVSRIRAKTIYAVSRNQFRHEL 126
>02_03_0407 -
18675368-18675378,18676047-18676977,18677323-18677376,
18677809-18678039,18678112-18678319,18678405-18678433,
18678638-18678706,18678832-18678893,18679056-18679133,
18679243-18679315,18681135-18681260
Length = 623
Score = 30.3 bits (65), Expect = 2.2
Identities = 23/68 (33%), Positives = 30/68 (44%)
Frame = +2
Query: 434 SSSFDALKKSLVRSSEVHPSDRPLGSVSGGRRREAPRHRSPINSIYTRARDETEPALRHS 613
SSS D LKK L R S P P+ + SGG+ HR Y A +P +RH+
Sbjct: 420 SSSTDDLKK-LKRESWSGPI--PIKAGSGGKPFSQADHRPSPTMAYPGAMPAAKPHVRHA 476
Query: 614 CPDDTRPR 637
P+
Sbjct: 477 SSSSVSPK 484
>07_03_0561 +
19485218-19485242,19485323-19486467,19487354-19487476,
19487553-19487626,19487886-19487946,19488285-19488370,
19488795-19488864,19489026-19489122,19489342-19489481,
19490225-19490308,19490313-19490346,19491833-19491951
Length = 685
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 803 AAPPFKPKRITASRQK*AGGGGTYP 729
A PP +PKR+ R+K AGG G P
Sbjct: 82 APPPPQPKRLQGGRKKGAGGHGKLP 106
>02_05_0171 - 26441007-26441918
Length = 303
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 115 RHFLM*XNXKMTPLTAPTPRQRPKYXRXARVG 20
RH L+ + TP TAP P +RP Y R + G
Sbjct: 17 RHHLL-EEEEETPATAPAPTRRPVYCRSSSFG 47
>01_05_0597 -
23526705-23526749,23526794-23526905,23527068-23527134,
23527439-23527566,23527638-23527750,23527827-23527972,
23528419-23528525,23528667-23528873,23530878-23531129,
23531324-23531406
Length = 419
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +2
Query: 395 CPDTAKVKKKMLYSSSFDALKKSLVRSSEVHPSDRPLGSVSGGR 526
CPD ++ ++ Y D + +++V ++ P DR SGG+
Sbjct: 173 CPDVSRQSRECFYIVFEDEIHQTIVENNLFKPGDRVAIGASGGK 216
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,396,382
Number of Sequences: 37544
Number of extensions: 489471
Number of successful extensions: 1629
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1627
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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