Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_J24
(902 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g59890.2 68418.m07511 actin-depolymerizing factor 4 (ADF4) id... 52 7e-07
At5g59890.1 68418.m07510 actin-depolymerizing factor 4 (ADF4) id... 52 7e-07
At3g46010.1 68416.m04978 actin-depolymerizing factor 1 (ADF1) id... 51 9e-07
At3g46000.1 68416.m04977 actin-depolymerizing factor, putative (... 49 4e-06
At1g01750.1 68414.m00094 actin-depolymerizing factor, putative s... 49 5e-06
At4g00680.1 68417.m00093 actin-depolymerizing factor, putative s... 47 1e-05
At2g31200.1 68415.m03810 actin-depolymerizing factor 6 (ADF6) id... 47 1e-05
At5g59880.1 68418.m07508 actin-depolymerizing factor 3 (ADF3) id... 45 6e-05
At5g59880.2 68418.m07509 actin-depolymerizing factor 3 (ADF3) id... 44 1e-04
At5g52360.1 68418.m06497 actin-depolymerizing factor, putative s... 44 1e-04
At4g25590.1 68417.m03687 actin-depolymerizing factor, putative s... 44 1e-04
At4g34970.1 68417.m04957 actin-depolymerizing factor, putative s... 44 2e-04
At3g45990.1 68416.m04976 actin-depolymerizing factor, putative s... 42 6e-04
At2g16700.1 68415.m01916 actin-depolymerizing factor 5 (ADF5) id... 41 0.001
At3g03290.1 68416.m00326 universal stress protein (USP) family p... 31 0.79
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 29 4.2
At3g03860.1 68416.m00398 expressed protein 29 4.2
At3g01560.1 68416.m00086 proline-rich family protein contains pr... 29 5.6
At2g39300.1 68415.m04825 expressed protein ; expression supporte... 29 5.6
At4g35350.2 68417.m05022 cysteine endopeptidase, papain-type (XC... 28 7.4
At4g35350.1 68417.m05023 cysteine endopeptidase, papain-type (XC... 28 7.4
At3g54820.1 68416.m06068 aquaporin, putative similar to plasma m... 28 9.7
At1g67800.3 68414.m07738 copine-related low similarity to SP|Q99... 28 9.7
At1g67800.2 68414.m07739 copine-related low similarity to SP|Q99... 28 9.7
At1g67800.1 68414.m07737 copine-related low similarity to SP|Q99... 28 9.7
At1g34360.1 68414.m04266 translation initiation factor 3 (IF-3) ... 28 9.7
>At5g59890.2 68418.m07511 actin-depolymerizing factor 4 (ADF4)
identical to SP|Q9ZSK3 Actin-depolymerizing factor 4
(ADF-4) (AtADF4) {Arabidopsis thaliana}
Length = 132
Score = 51.6 bits (118), Expect = 7e-07
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = +2
Query: 350 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL 466
T+E +K K+F ++WCPD AKV+ KM+Y+SS D K+ L
Sbjct: 69 TAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKREL 107
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = +1
Query: 160 EXKXDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDLQKGGTGECRYGLFDFEY-- 330
E K + HR++V+ I + +KQ+ VE VGE YE F L ECRY ++DF++
Sbjct: 13 ELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLP---ADECRYAIYDFDFVT 69
Query: 331 THQCQ 345
CQ
Sbjct: 70 AENCQ 74
>At5g59890.1 68418.m07510 actin-depolymerizing factor 4 (ADF4)
identical to SP|Q9ZSK3 Actin-depolymerizing factor 4
(ADF-4) (AtADF4) {Arabidopsis thaliana}
Length = 139
Score = 51.6 bits (118), Expect = 7e-07
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = +2
Query: 350 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL 466
T+E +K K+F ++WCPD AKV+ KM+Y+SS D K+ L
Sbjct: 76 TAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKREL 114
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = +1
Query: 160 EXKXDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDLQKGGTGECRYGLFDFEY-- 330
E K + HR++V+ I + +KQ+ VE VGE YE F L ECRY ++DF++
Sbjct: 20 ELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLP---ADECRYAIYDFDFVT 76
Query: 331 THQCQ 345
CQ
Sbjct: 77 AENCQ 81
>At3g46010.1 68416.m04978 actin-depolymerizing factor 1 (ADF1)
identical to SP|Q39250 Actin-depolymerizing factor 1
(ADF-1) (AtADF1) {Arabidopsis thaliana}
Length = 139
Score = 51.2 bits (117), Expect = 9e-07
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = +2
Query: 350 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL 466
T+E +K K+F ++WCPD AKV+ KM+Y+SS D K+ L
Sbjct: 76 TAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKREL 114
Score = 45.6 bits (103), Expect = 5e-05
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +1
Query: 160 EXKXDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDLQKGGTGECRYGLFDFEY-- 330
E K + HR++V+ I + +KQ+ VE VG+ YE+F L ECRY ++DF++
Sbjct: 20 ELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP---ADECRYAIYDFDFVT 76
Query: 331 THQCQ 345
CQ
Sbjct: 77 AENCQ 81
>At3g46000.1 68416.m04977 actin-depolymerizing factor, putative
(ADF2) strong similarity to SP|Q9ZSK3
Actin-depolymerizing factor 4 (ADF-4) (AtADF4)
{Arabidopsis thaliana}; contains Pfam profile PF00241:
Cofilin/tropomyosin-type actin-binding protein
Length = 137
Score = 49.2 bits (112), Expect = 4e-06
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = +2
Query: 350 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL 466
T+E +K K+F ++W PDTAKV+ KM+Y+SS D K+ L
Sbjct: 74 TAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKREL 112
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +1
Query: 154 YEEXKXDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGTGECRYGLFDFEY- 330
+ E K + R +V+ I D KQ+ VE +GE Y+ F L +CRY ++DF++
Sbjct: 18 FMELKAKRTFRTIVYKIED-KQVIVEKLGEPEQSYDDFAASLP---ADDCRYCIYDFDFV 73
Query: 331 -THQCQ 345
CQ
Sbjct: 74 TAENCQ 79
>At1g01750.1 68414.m00094 actin-depolymerizing factor, putative
strong similarity to SP|P30175 Actin-depolymerizing
factor (ADF) {Lilium longiflorum}; contains Pfam profile
PF00241: Cofilin/tropomyosin-type actin-binding protein
Length = 140
Score = 48.8 bits (111), Expect = 5e-06
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Frame = +2
Query: 350 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL----VRSSEVHPSDRPLGSVS 517
T E +K K+F ++W PDT++V+ KMLY+SS D K+ L V PS+ L +
Sbjct: 76 TPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSLDIIK 135
Query: 518 G 520
G
Sbjct: 136 G 136
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Frame = +1
Query: 160 EXKXDKKHRYVVFYIRDEK--QIDVETVGERNAEYEQFLEDLQKGGTGECRYGLFDFEYT 333
E K + +R++VF I DEK Q+ ++ +G YE F + + ECRY ++D+++T
Sbjct: 20 ELKAKRNYRFIVFKI-DEKAQQVMIDKLGNPEETYEDFTRSIPED---ECRYAVYDYDFT 75
Query: 334 --HQCQ 345
CQ
Sbjct: 76 TPENCQ 81
>At4g00680.1 68417.m00093 actin-depolymerizing factor, putative
strong similarity to SP|P30175 Actin-depolymerizing
factor (ADF) {Lilium longiflorum}; contains Pfam profile
PF00241: Cofilin/tropomyosin-type actin-binding protein
Length = 140
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Frame = +2
Query: 350 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL----VRSSEVHPSDRPLGSVS 517
T + +K K+F ++W PDT++V+ KMLY+SS D K+ + V PS+ L +
Sbjct: 76 TEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVELQATDPSEMSLDIIK 135
Query: 518 G 520
G
Sbjct: 136 G 136
Score = 41.9 bits (94), Expect = 6e-04
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Frame = +1
Query: 160 EXKXDKKHRYVVFYIRDEK--QIDVETVGERNAEYEQFLEDLQKGGTGECRYGLFDFEYT 333
E K + +R++VF I DEK Q+ +E +G Y+ F + ECRY ++DF++T
Sbjct: 20 ELKAKRTYRFIVFKI-DEKAQQVQIEKLGNPEETYDDFTSSIPDD---ECRYAVYDFDFT 75
Query: 334 HQ--CQ 345
+ CQ
Sbjct: 76 TEDNCQ 81
>At2g31200.1 68415.m03810 actin-depolymerizing factor 6 (ADF6)
identical to SP|Q9ZSK2 Actin-depolymerizing factor 6
(ADF-6) (AtADF6) {Arabidopsis thaliana}
Length = 146
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +1
Query: 151 TYEEXKXDKKHRYVVFYI-RDEKQIDVETVGERNAEYEQFLEDLQKGGTGECRYGLFDFE 327
T+ E + K HRYVVF I +K++ VE G Y+ FL L +CRY ++DF+
Sbjct: 24 TFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLP---DNDCRYAVYDFD 80
Query: 328 Y--THQCQ 345
+ + CQ
Sbjct: 81 FVTSENCQ 88
Score = 41.9 bits (94), Expect = 6e-04
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +2
Query: 350 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL 466
TSE +K K+F +W P T+ ++ K+LYS+S D L + L
Sbjct: 83 TSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSREL 121
>At5g59880.1 68418.m07508 actin-depolymerizing factor 3 (ADF3)
identical to SP|Q9ZSK4 Actin-depolymerizing factor 3
(ADF 3) (AtADF3) {Arabidopsis thaliana}
Length = 139
Score = 45.2 bits (102), Expect = 6e-05
Identities = 17/39 (43%), Positives = 28/39 (71%)
Frame = +2
Query: 350 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL 466
+SE + ++F ++W PDTA+V+ KM+Y+SS D K+ L
Sbjct: 76 SSEGVPRSRIFFVAWSPDTARVRSKMIYASSKDRFKREL 114
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 154 YEEXKXDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDLQKGGTGECRYGLFDFEY 330
+ E K + HR++++ I + +KQ+ VE +GE +E L ECRY +FDF++
Sbjct: 18 FMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASLP---ADECRYAIFDFDF 74
>At5g59880.2 68418.m07509 actin-depolymerizing factor 3 (ADF3)
identical to SP|Q9ZSK4 Actin-depolymerizing factor 3
(ADF 3) (AtADF3) {Arabidopsis thaliana}
Length = 124
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 154 YEEXKXDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDLQKGGTGECRYGLFDFEY 330
+ E K + HR++++ I + +KQ+ VE +GE +E L ECRY +FDF++
Sbjct: 18 FMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASLP---ADECRYAIFDFDF 74
>At5g52360.1 68418.m06497 actin-depolymerizing factor, putative
strong similarity to pollen specific
actin-depolymerizing factor 2 [Nicotiana tabacum]
GI:22857914; contains Pfam profile PF00241:
Cofilin/tropomyosin-type actin-binding protein
Length = 137
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/39 (43%), Positives = 29/39 (74%)
Frame = +2
Query: 350 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL 466
T+E +K K+F ++W PD+++V+ KM+Y+SS D K+ L
Sbjct: 74 TAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKREL 112
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +1
Query: 160 EXKXDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGTGECRYGLFDFEYT 333
E K + +R+++F I D +Q+ VE +G Y+ F L ECRY ++DF++T
Sbjct: 20 ELKAKRNYRFIIFRI-DGQQVVVEKLGSPQENYDDFTNYLPPN---ECRYAVYDFDFT 73
>At4g25590.1 68417.m03687 actin-depolymerizing factor, putative
strong similarity to pollen specific
actin-depolymerizing factor 2 [Nicotiana tabacum]
GI:22857914; contains Pfam profile PF00241:
Cofilin/tropomyosin-type actin-binding protein
Length = 130
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/39 (43%), Positives = 28/39 (71%)
Frame = +2
Query: 350 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL 466
T E +K K+F ++W PD+++V+ KM+Y+SS D K+ L
Sbjct: 67 TDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKREL 105
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = +1
Query: 160 EXKXDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGTGECRYGLFDFEY 330
E K + +R+++F I D +Q+ VE +G + Y+ F L ECRY +FDF++
Sbjct: 13 ELKSKRNYRFIIFRI-DGQQVVVEKLGNPDETYDDFTASLP---ANECRYAVFDFDF 65
>At4g34970.1 68417.m04957 actin-depolymerizing factor, putative
similar to SP|Q9ZNT3 Actin-depolymerizing factor 5
(ADF-5) (AtADF5) {Arabidopsis thaliana}; contains Pfam
profile PF00241: Cofilin/tropomyosin-type actin-binding
protein
Length = 130
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 151 TYEEXKXDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGGTGECRYGLFDFE 327
++ E K K HRYVV+ + ++ +++ V+ VG Y+ L + +CRY +FDF+
Sbjct: 8 SFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAASLPED---DCRYAVFDFD 64
Query: 328 Y 330
Y
Sbjct: 65 Y 65
Score = 35.5 bits (78), Expect = 0.049
Identities = 11/39 (28%), Positives = 27/39 (69%)
Frame = +2
Query: 350 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL 466
T + + K+F ++W P+ +++++KM+Y++S L++ L
Sbjct: 67 TVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVL 105
>At3g45990.1 68416.m04976 actin-depolymerizing factor, putative
similar to SP|Q9ZSK3 Actin-depolymerizing factor 4
(ADF-4) (AtADF4) {Arabidopsis thaliana}; contains Pfam
profile PF00241: Cofilin/tropomyosin-type actin-binding
protein
Length = 133
Score = 41.9 bits (94), Expect = 6e-04
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +2
Query: 368 KQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVR-SSEVHPSDRPLGSVSGGRRR 532
++K+ ++W P TAK++KKM+YSS+ D K+ L E H +D S+ RRR
Sbjct: 76 ERKICFIAWSPSTAKMRKKMIYSSTKDRFKRELDGIQVEFHATDLTDISLDAIRRR 131
Score = 37.5 bits (83), Expect = 0.012
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Frame = +1
Query: 151 TYEEXKXDKKHRYVVFYIRDEKQIDVETV------GERNAEYEQFLEDLQKGGTGECRYG 312
T+ E K + R +V+ I D Q+ VE GER YE+F L ECRY
Sbjct: 10 TFLELKERRTFRSIVYKIEDNMQVIVEKHHYKKMHGEREQSYEEFANSLP---ADECRYA 66
Query: 313 LFDFEY 330
+ D E+
Sbjct: 67 ILDIEF 72
>At2g16700.1 68415.m01916 actin-depolymerizing factor 5 (ADF5)
identical to SP|Q9ZNT3 Actin-depolymerizing factor 5
(ADF-5) (AtADF5) {Arabidopsis thaliana}
Length = 143
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +1
Query: 151 TYEEXKXDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGGTGECRYGLFDFE 327
++ + K K HRY+VF I ++ +++ V+ VG Y + L +CRY +FDF+
Sbjct: 21 SFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDLEDSLP---VDDCRYAVFDFD 77
Query: 328 Y 330
+
Sbjct: 78 F 78
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/39 (35%), Positives = 28/39 (71%)
Frame = +2
Query: 350 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL 466
T + +K K+F ++W P+ +K++ K+LY++S D L++ L
Sbjct: 80 TVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVL 118
>At3g03290.1 68416.m00326 universal stress protein (USP) family
protein contains Pfam profile: PF00582 universal stress
protein family
Length = 274
Score = 31.5 bits (68), Expect = 0.79
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 229 ETVGERNAEYEQFLEDLQKGGTGE 300
ET G+ +EYE+F E+ ++GG GE
Sbjct: 45 ETDGDSTSEYEEFEEEKERGGEGE 68
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 29.1 bits (62), Expect = 4.2
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +2
Query: 437 SSFDALKKSLVRSSEVHPSDRPL--GSVSGGRRREAPRHRSPINSIYTRARDETEPALRH 610
+S ++ + SL +E S PL + SG + SP N TRA D T PA+
Sbjct: 284 TSTESNQTSLAAENENRTSSPPLPLATSSGPSGPNSVPGNSPSNIFLTRAGDRTSPAVDG 343
Query: 611 SCPDDTRP 634
D+ +P
Sbjct: 344 MDVDEAQP 351
>At3g03860.1 68416.m00398 expressed protein
Length = 300
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 377 LFLMSWCPDTAKVKKKM-LYSSSFDALKKSLVRSSEVHPS 493
LF SWCP + V+ K + SS F ++ V S+ PS
Sbjct: 80 LFYASWCPFSRAVRPKFDMLSSMFPQIQHLAVEHSQALPS 119
>At3g01560.1 68416.m00086 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 511
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 752 AGGGGTYPRGLTRGPTTSKINHINTIRFP 666
+GGG + PR +R P I+ + T+ FP
Sbjct: 441 SGGGSSSPRSESRAPIDDVIDRVTTMGFP 469
>At2g39300.1 68415.m04825 expressed protein ; expression supported
by MPSS
Length = 768
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +2
Query: 386 MSWCPDTAKVKKKMLYSSSFDALKKSLVRSSEVHPSDRPLGSVSGGRRREAPRHRSP 556
MS C + Y + L++S +S +H S S+SG RRR PR +SP
Sbjct: 94 MSTCSSNVSSQVLDRYIDGEEHLERSKQKSGSLHSS-----SLSGSRRRLPPRAQSP 145
>At4g35350.2 68417.m05022 cysteine endopeptidase, papain-type (XCP1)
identical to papain-type cysteine endopeptidase XCP1
GI:6708181 from [Arabidopsis thaliana]
Length = 288
Score = 28.3 bits (60), Expect = 7.4
Identities = 22/78 (28%), Positives = 33/78 (42%)
Frame = +1
Query: 232 TVGERNAEYEQFLEDLQKGGTGECRYGLFDFEYTHQCQGHVGG*QETEALPDVVVPGHRQ 411
T G ++ EQ L D C GL D+ + + GG + + P ++ G Q
Sbjct: 177 TTGNLSSLSEQELIDCDTTFNSGCNGGLMDYAFQYIIS--TGGLHKEDDYPYLMEEGICQ 234
Query: 412 GQEEDVVL*LVRRSEKVP 465
Q+EDV + E VP
Sbjct: 235 EQKEDVERVTISGYEDVP 252
>At4g35350.1 68417.m05023 cysteine endopeptidase, papain-type (XCP1)
identical to papain-type cysteine endopeptidase XCP1
GI:6708181 from [Arabidopsis thaliana]
Length = 355
Score = 28.3 bits (60), Expect = 7.4
Identities = 22/78 (28%), Positives = 33/78 (42%)
Frame = +1
Query: 232 TVGERNAEYEQFLEDLQKGGTGECRYGLFDFEYTHQCQGHVGG*QETEALPDVVVPGHRQ 411
T G ++ EQ L D C GL D+ + + GG + + P ++ G Q
Sbjct: 177 TTGNLSSLSEQELIDCDTTFNSGCNGGLMDYAFQYIIS--TGGLHKEDDYPYLMEEGICQ 234
Query: 412 GQEEDVVL*LVRRSEKVP 465
Q+EDV + E VP
Sbjct: 235 EQKEDVERVTISGYEDVP 252
>At3g54820.1 68416.m06068 aquaporin, putative similar to plasma
membrane aquaporin GI:3551133 from [Raphanus sativus]
Length = 286
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -3
Query: 426 IFFLTLAVSGHH-DIRKSFCFLLASDVXLALVRVFKVKQAISAFPGAALLQILEELF 259
+ + T +SG H + +F LLA V L ++ V Q + A G AL++ + +
Sbjct: 93 LVYCTAGISGGHINPAVTFGLLLARKVTLVRAVMYMVAQCLGAICGVALVKAFQSAY 149
>At1g67800.3 68414.m07738 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 433
Score = 27.9 bits (59), Expect = 9.7
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 431 YSSSFDALKKSLVRSSEVHPSDRPLGSVSGGRR--REAPRHRSPINSIYTRARDETEPAL 604
YSS++D +S + HPS P+ S + GR+ + R S I Y R+ DE AL
Sbjct: 29 YSSAWD---QSSYYQTPNHPSASPVSSYNSGRQTPKNLERKYSRIADNY-RSIDEVTAAL 84
Query: 605 RHS 613
H+
Sbjct: 85 SHA 87
>At1g67800.2 68414.m07739 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 453
Score = 27.9 bits (59), Expect = 9.7
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 431 YSSSFDALKKSLVRSSEVHPSDRPLGSVSGGRR--REAPRHRSPINSIYTRARDETEPAL 604
YSS++D +S + HPS P+ S + GR+ + R S I Y R+ DE AL
Sbjct: 49 YSSAWD---QSSYYQTPNHPSASPVSSYNSGRQTPKNLERKYSRIADNY-RSIDEVTAAL 104
Query: 605 RHS 613
H+
Sbjct: 105 SHA 107
>At1g67800.1 68414.m07737 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 433
Score = 27.9 bits (59), Expect = 9.7
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 431 YSSSFDALKKSLVRSSEVHPSDRPLGSVSGGRR--REAPRHRSPINSIYTRARDETEPAL 604
YSS++D +S + HPS P+ S + GR+ + R S I Y R+ DE AL
Sbjct: 29 YSSAWD---QSSYYQTPNHPSASPVSSYNSGRQTPKNLERKYSRIADNY-RSIDEVTAAL 84
Query: 605 RHS 613
H+
Sbjct: 85 SHA 87
>At1g34360.1 68414.m04266 translation initiation factor 3 (IF-3)
family protein low similarity to Translation initiation
factor IF-3 from [subsp. Schizaphis graminum] {Buchnera
aphidicola} SP|P46243, {Salmonella typhimurium}
SP|P33321; contains Pfam profiles PF05198: Translation
initiation factor IF-3 N-terminal domain, PF00707:
Translation initiation factor IF-3 C-terminal domain
Length = 520
Score = 27.9 bits (59), Expect = 9.7
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = -2
Query: 844 DIYNIN-VPPI*LQRLPRXSNRNALLLHGRNRQGAVVPTRADSQEVLPPVKSIILILFVF 668
DI I P I + L S++ L+ R + D + L P K ++ +LF F
Sbjct: 165 DIKEIRFTPKIEAKDLKFKSDQALKLMESGYRVKCLAVPDKDKHKELEPEK-LLELLFRF 223
Query: 667 LCNNTKRLVVSWPRVVRAG 611
C LV SWP R G
Sbjct: 224 TCFIGDALVESWPEADRKG 242
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,696,475
Number of Sequences: 28952
Number of extensions: 352069
Number of successful extensions: 1175
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1168
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2129873112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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