Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_J23
(1221 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.41
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.41
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.72
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.72
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.72
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 29 1.2
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 29 1.2
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 29 1.2
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 31 1.3
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 31 1.3
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 31 1.7
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 31 1.7
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 31 2.2
U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific... 31 2.2
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 25 3.2
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 25 3.3
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 3.3
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 3.8
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 30 3.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 3.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 3.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 3.8
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 29 5.0
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 25 6.1
Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 6.7
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 25 7.3
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 25 7.3
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 29 8.8
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 29 8.8
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 8.8
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 8.8
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 8.8
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 8.8
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 29 8.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 8.8
Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical pr... 25 9.5
AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical... 25 9.5
Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical pr... 25 9.6
AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical... 25 9.6
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 26 9.9
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.1 bits (72), Expect = 0.41
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = +3
Query: 567 PKXYXXXPPPPPPXXFXKKKKXXGGAPPXXKKKXKXXXPPPPXXXXXGGGGG 722
P PPPPPP F PP + PPPP G G
Sbjct: 310 PPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPG 361
Score = 23.8 bits (49), Expect(2) = 7.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 722 PPPPPPP 702
PPPPPPP
Sbjct: 297 PPPPPPP 303
Score = 23.4 bits (48), Expect(2) = 7.7
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 719 PPPPPPXXXGGXG 681
PPPPPP G G
Sbjct: 317 PPPPPPSRFGPPG 329
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.1 bits (72), Expect = 0.41
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = +3
Query: 567 PKXYXXXPPPPPPXXFXKKKKXXGGAPPXXKKKXKXXXPPPPXXXXXGGGGG 722
P PPPPPP F PP + PPPP G G
Sbjct: 320 PPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPG 371
Score = 23.8 bits (49), Expect(2) = 7.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 722 PPPPPPP 702
PPPPPPP
Sbjct: 307 PPPPPPP 313
Score = 23.4 bits (48), Expect(2) = 7.7
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 719 PPPPPPXXXGGXG 681
PPPPPP G G
Sbjct: 327 PPPPPPSRFGPPG 339
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.72
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 4/60 (6%)
Frame = +3
Query: 552 GGXXPPKXYXXXPP----PPPPXXFXKKKKXXGGAPPXXKKKXKXXXPPPPXXXXXGGGG 719
GG PP PP PPPP GG PP PPPP GG
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 24.2 bits (50), Expect(2) = 5.3
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -2
Query: 554 PPXKKXXCFFSPXPPPPXXXGGG 486
PP C P PPPP GG
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGG 783
Score = 23.4 bits (48), Expect(2) = 5.3
Identities = 14/55 (25%), Positives = 18/55 (32%), Gaps = 3/55 (5%)
Frame = -2
Query: 374 GGFXXKNPPPPXX---TKIXEXXPPFXXPXXXXXXPXGVFFFXWGXXNXPPQKTP 219
GGF PPPP + P + P + F WG P+ P
Sbjct: 778 GGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPKVDGPMRKFPWGAHTINPRDIP 832
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.72
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 4/60 (6%)
Frame = +3
Query: 552 GGXXPPKXYXXXPP----PPPPXXFXKKKKXXGGAPPXXKKKXKXXXPPPPXXXXXGGGG 719
GG PP PP PPPP GG PP PPPP GG
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 24.2 bits (50), Expect(2) = 5.3
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -2
Query: 554 PPXKKXXCFFSPXPPPPXXXGGG 486
PP C P PPPP GG
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGG 783
Score = 23.4 bits (48), Expect(2) = 5.3
Identities = 14/55 (25%), Positives = 18/55 (32%), Gaps = 3/55 (5%)
Frame = -2
Query: 374 GGFXXKNPPPPXX---TKIXEXXPPFXXPXXXXXXPXGVFFFXWGXXNXPPQKTP 219
GGF PPPP + P + P + F WG P+ P
Sbjct: 778 GGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPKVDGPMRKFPWGAHTINPRDIP 832
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.72
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 4/60 (6%)
Frame = +3
Query: 552 GGXXPPKXYXXXPP----PPPPXXFXKKKKXXGGAPPXXKKKXKXXXPPPPXXXXXGGGG 719
GG PP PP PPPP GG PP PPPP GG
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Score = 24.2 bits (50), Expect(2) = 5.5
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -2
Query: 554 PPXKKXXCFFSPXPPPPXXXGGG 486
PP C P PPPP GG
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFKGG 366
Score = 23.4 bits (48), Expect(2) = 5.5
Identities = 14/55 (25%), Positives = 18/55 (32%), Gaps = 3/55 (5%)
Frame = -2
Query: 374 GGFXXKNPPPPXX---TKIXEXXPPFXXPXXXXXXPXGVFFFXWGXXNXPPQKTP 219
GGF PPPP + P + P + F WG P+ P
Sbjct: 361 GGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPKVDGPMRKFPWGAHTINPRDIP 415
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 29.5 bits (63), Expect = 5.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 722 PPPPPPPXXXGGXG 681
PPPPPPP GG G
Sbjct: 65 PPPPPPPPAFGGLG 78
Score = 28.7 bits (61), Expect(2) = 1.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 552 GGXXPPKXYXXXPPPPPPXXF 614
G PP Y PPPPPP F
Sbjct: 54 GYPRPPIGYGAPPPPPPPPAF 74
Score = 21.4 bits (43), Expect(2) = 1.2
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +3
Query: 681 PPPPXXXXXGGGGG 722
PPPP GG GG
Sbjct: 66 PPPPPPPAFGGLGG 79
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 29.5 bits (63), Expect = 5.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 722 PPPPPPPXXXGGXG 681
PPPPPPP GG G
Sbjct: 65 PPPPPPPPAFGGLG 78
Score = 28.7 bits (61), Expect(2) = 1.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 552 GGXXPPKXYXXXPPPPPPXXF 614
G PP Y PPPPPP F
Sbjct: 54 GYPRPPIGYGAPPPPPPPPAF 74
Score = 21.4 bits (43), Expect(2) = 1.2
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +3
Query: 681 PPPPXXXXXGGGGG 722
PPPP GG GG
Sbjct: 66 PPPPPPPAFGGLGG 79
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 29.5 bits (63), Expect = 5.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 722 PPPPPPPXXXGGXG 681
PPPPPPP GG G
Sbjct: 65 PPPPPPPPAFGGLG 78
Score = 28.7 bits (61), Expect(2) = 1.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 552 GGXXPPKXYXXXPPPPPPXXF 614
G PP Y PPPPPP F
Sbjct: 54 GYPRPPIGYGAPPPPPPPPAF 74
Score = 21.4 bits (43), Expect(2) = 1.2
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +3
Query: 681 PPPPXXXXXGGGGG 722
PPPP GG GG
Sbjct: 66 PPPPPPPAFGGLGG 79
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 31.5 bits (68), Expect = 1.3
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 764 GGGGXXXXXFFXXXPPPPPPPXXXGG 687
GGGG PPPPPPP GG
Sbjct: 50 GGGGGSYAAAPALPPPPPPPPAPIGG 75
Score = 30.3 bits (65), Expect = 2.9
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 764 GGGGXXXXXFFXXXPPPPPPPXXXGGXG 681
GGGG PPPPPP GG G
Sbjct: 51 GGGGSYAAAPALPPPPPPPPAPIGGGAG 78
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 31.5 bits (68), Expect = 1.3
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 764 GGGGXXXXXFFXXXPPPPPPPXXXGG 687
GGGG PPPPPPP GG
Sbjct: 50 GGGGGSYAAAPALPPPPPPPPAPIGG 75
Score = 30.3 bits (65), Expect = 2.9
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 764 GGGGXXXXXFFXXXPPPPPPPXXXGGXG 681
GGGG PPPPPP GG G
Sbjct: 51 GGGGSYAAAPALPPPPPPPPAPIGGGAG 78
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 31.1 bits (67), Expect = 1.7
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +3
Query: 588 PPPPPPXXFXKKKKXXGGAPPXXKKKXKXXXPPP 689
PPPPPP + GG PP PPP
Sbjct: 771 PPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPPP 804
Score = 29.1 bits (62), Expect = 6.7
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 552 GGXXPPKXYXXXPPPPPPXXFXKKKKXXGGAPPXXKK 662
GG PP PPPPPP G P K
Sbjct: 787 GGIPPPPPLGIIPPPPPPGNLLMNGINRGDISPAANK 823
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 31.1 bits (67), Expect = 1.7
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +3
Query: 588 PPPPPPXXFXKKKKXXGGAPPXXKKKXKXXXPPP 689
PPPPPP + GG PP PPP
Sbjct: 771 PPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPPP 804
Score = 29.1 bits (62), Expect = 6.7
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 552 GGXXPPKXYXXXPPPPPPXXFXKKKKXXGGAPPXXKK 662
GG PP PPPPPP G P K
Sbjct: 787 GGIPPPPPLGIIPPPPPPGNLLMNGINRGDISPAANK 823
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 30.7 bits (66), Expect = 2.2
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = -3
Query: 733 FXXXPPPPPXXXXXGGGGXXXXXXXXXWGGAPPXXFFFXKXXXGGGGGGXXXYXFG 566
F PPPP GGGG GGA F GGGG G FG
Sbjct: 277 FGGAPPPPSGSAMGGGGG----------GGATSAYFGVGSGAMGGGGAGAQSAYFG 322
>U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific
family, class qprotein 3 protein.
Length = 265
Score = 30.7 bits (66), Expect = 2.2
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = -3
Query: 733 FXXXPPPPPXXXXXGGGGXXXXXXXXXWGGAPPXXFFFXKXXXGGGGGGXXXYXFG 566
F PPPP GGGG GGA F GGGG G FG
Sbjct: 171 FGGAPPPPSGSAMGGGGG----------GGATSAYFGVGSGAMGGGGAGAQSAYFG 216
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 24.6 bits (51), Expect(2) = 3.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2
Query: 719 PPPPPPXXXGG 687
PPPPPP GG
Sbjct: 808 PPPPPPPPPGG 818
Score = 23.8 bits (49), Expect(2) = 3.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 722 PPPPPPP 702
PPPPPPP
Sbjct: 767 PPPPPPP 773
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 24.6 bits (51), Expect(2) = 3.3
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2
Query: 719 PPPPPPXXXGG 687
PPPPPP GG
Sbjct: 808 PPPPPPPPPGG 818
Score = 23.8 bits (49), Expect(2) = 3.3
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 722 PPPPPPP 702
PPPPPPP
Sbjct: 767 PPPPPPP 773
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.5 bits (63), Expect = 5.0
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 591 PPPPPXXFXKKKKXXGGAPPXXKKKXKXXXPPPP 692
PPP P F GG PP PPPP
Sbjct: 66 PPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPP 99
Score = 25.0 bits (52), Expect(2) = 3.3
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2
Query: 722 PPPPPPPXXXG 690
PPPPPPP G
Sbjct: 114 PPPPPPPSGLG 124
Score = 23.4 bits (48), Expect(2) = 3.3
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = -2
Query: 761 GGGXXXXXFFXXXPPPPPP 705
GG F PPPPPP
Sbjct: 102 GGIPPPPPMFGAPPPPPPP 120
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.9 bits (64), Expect = 3.8
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 588 PPPPPPXXFXKKKKXXGGAPPXXKKKXKXXXPPP 689
PPPPPP +K + G +PP PPP
Sbjct: 122 PPPPPPP---RKSRAGGSSPPPPPPPRVPRTPPP 152
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.9 bits (64), Expect = 3.8
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 691 PXXXGGGGGGGXXXKXXXXXXPPPP 765
P GGGGGGG PPPP
Sbjct: 21 PMAGGGGGGGGCAPAAPACAPPPPP 45
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 3.8
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 4/51 (7%)
Frame = +3
Query: 552 GGXXPPKXYXXXPPPPPPXXFXK----KKKXXGGAPPXXKKKXKXXXPPPP 692
GG PP PPPPPP GG+PP PPPP
Sbjct: 286 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP---PAGTGSPPPPP 333
Score = 29.1 bits (62), Expect = 6.7
Identities = 16/51 (31%), Positives = 18/51 (35%), Gaps = 5/51 (9%)
Frame = +3
Query: 552 GGXXPPKXYXXXPPP-----PPPXXFXKKKKXXGGAPPXXKKKXKXXXPPP 689
G PP PPP PPP GG+PP + PPP
Sbjct: 253 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 3.8
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 4/51 (7%)
Frame = +3
Query: 552 GGXXPPKXYXXXPPPPPPXXFXK----KKKXXGGAPPXXKKKXKXXXPPPP 692
GG PP PPPPPP GG+PP PPPP
Sbjct: 307 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP---PAGTGSPPPPP 354
Score = 29.1 bits (62), Expect = 6.7
Identities = 16/51 (31%), Positives = 18/51 (35%), Gaps = 5/51 (9%)
Frame = +3
Query: 552 GGXXPPKXYXXXPPP-----PPPXXFXKKKKXXGGAPPXXKKKXKXXXPPP 689
G PP PPP PPP GG+PP + PPP
Sbjct: 274 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 3.8
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 4/51 (7%)
Frame = +3
Query: 552 GGXXPPKXYXXXPPPPPPXXFXK----KKKXXGGAPPXXKKKXKXXXPPPP 692
GG PP PPPPPP GG+PP PPPP
Sbjct: 292 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP---PAGTGSPPPPP 339
Score = 29.1 bits (62), Expect = 6.7
Identities = 16/51 (31%), Positives = 18/51 (35%), Gaps = 5/51 (9%)
Frame = +3
Query: 552 GGXXPPKXYXXXPPP-----PPPXXFXKKKKXXGGAPPXXKKKXKXXXPPP 689
G PP PPP PPP GG+PP + PPP
Sbjct: 259 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 309
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 29.5 bits (63), Expect = 5.0
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -2
Query: 782 FFFXXXGGGGXXXXXFFXXXPPPPPPPXXXGGXG 681
F F GGGG PPPPPP GG G
Sbjct: 17 FLFPSGGGGGCGCA------PPPPPPACGCGGGG 44
Score = 28.7 bits (61), Expect = 8.8
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -3
Query: 784 FFFXXXGGGGXXXXXXFFXXXPPPPPXXXXXGGGG 680
F F GGGG PPPPP GGGG
Sbjct: 17 FLFPSGGGGGCGCAP------PPPPPACGCGGGGG 45
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 24.6 bits (51), Expect(2) = 6.1
Identities = 10/22 (45%), Positives = 11/22 (50%), Gaps = 3/22 (13%)
Frame = +3
Query: 549 WGGXXPPKX---YXXXPPPPPP 605
W PP+ Y PPPPPP
Sbjct: 138 WQQQQPPRHHRQYDPLPPPPPP 159
Score = 23.0 bits (47), Expect(2) = 6.1
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +3
Query: 681 PPPPXXXXXGGGGG 722
PPPP GG GG
Sbjct: 154 PPPPPPPLMGGSGG 167
>Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical
protein T22A3.5 protein.
Length = 790
Score = 29.1 bits (62), Expect = 6.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 779 FFXXXGGGGXXXXXFFXXXPPPPPPP 702
FF GG F PPPPPPP
Sbjct: 731 FFPMIGGPPLMHPTFSTSAPPPPPPP 756
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.1 bits (62), Expect = 6.7
Identities = 23/75 (30%), Positives = 23/75 (30%), Gaps = 3/75 (4%)
Frame = -3
Query: 766 GGGGXXXXXXFFXXXPPPPPXX---XXXGGGGXXXXXXXXXWGGAPPXXFFFXKXXXGGG 596
GGGG PPPP GGGG GG GGG
Sbjct: 38 GGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGG 97
Query: 595 GGGXXXYXFGGXXPP 551
G G GG PP
Sbjct: 98 GCGGGGGCGGGCAPP 112
Score = 28.7 bits (61), Expect = 8.8
Identities = 20/61 (32%), Positives = 20/61 (32%), Gaps = 1/61 (1%)
Frame = -3
Query: 766 GGGGXXXXXXFFXXXPPPPPXXXXXGG-GGXXXXXXXXXWGGAPPXXFFFXKXXXGGGGG 590
GGGG PPPP GG GG GG GGGGG
Sbjct: 95 GGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGG 154
Query: 589 G 587
G
Sbjct: 155 G 155
Score = 24.2 bits (50), Expect(2) = 10.0
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 703 GGGGGGGXXXKXXXXXXPPPP 765
GGGGG G PPPP
Sbjct: 37 GGGGGCGGGGGCGGGCAPPPP 57
Score = 22.6 bits (46), Expect(2) = 10.0
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 691 PXXXGGGGGGG 723
P GGGGGGG
Sbjct: 21 PSGGGGGGGGG 31
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.1 bits (62), Expect = 6.7
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 722 PPPPPPPXXXGGXGXXXFXFFFXXGGGP 639
PPPPPPP GG + G GP
Sbjct: 54 PPPPPPPSYAGGPSYAGPSYAGSYGPGP 81
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 25.0 bits (52), Expect(2) = 7.3
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2
Query: 722 PPPPPPPXXXG 690
PPPPPPP G
Sbjct: 674 PPPPPPPPMPG 684
Score = 22.2 bits (45), Expect(2) = 7.3
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -2
Query: 734 FXXXPPPPPP 705
F PPPPPP
Sbjct: 672 FMPPPPPPPP 681
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 25.0 bits (52), Expect(2) = 7.3
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2
Query: 722 PPPPPPPXXXG 690
PPPPPPP G
Sbjct: 674 PPPPPPPPMPG 684
Score = 22.2 bits (45), Expect(2) = 7.3
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -2
Query: 734 FXXXPPPPPP 705
F PPPPPP
Sbjct: 672 FMPPPPPPPP 681
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 28.7 bits (61), Expect = 8.8
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -2
Query: 779 FFXXXGGGGXXXXXFFXXXPPPPPPPXXXGG 687
F GGGG PPPPPPP GG
Sbjct: 17 FLLPSGGGGGCGCA-----PPPPPPPCGCGG 42
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 28.7 bits (61), Expect = 8.8
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = -3
Query: 721 PPPPPXXXXXGGG-GXXXXXXXXXWGGAPPXXFF--FXKXXXGGGGGG 587
P PPP GGG G GGA F GGGGGG
Sbjct: 272 PQPPPQQGGGGGGAGGMFRNILSSGGGAAAGSMLGRFLSNRGGGGGGG 319
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 8.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2
Query: 764 GGGGXXXXXFFXXXPPPPPPP 702
GGGG PPPPPPP
Sbjct: 291 GGGGYSAPAAAPPPPPPPPPP 311
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 8.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2
Query: 764 GGGGXXXXXFFXXXPPPPPPP 702
GGGG PPPPPPP
Sbjct: 291 GGGGYSAPAAAPPPPPPPPPP 311
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.7 bits (61), Expect = 8.8
Identities = 17/58 (29%), Positives = 17/58 (29%), Gaps = 6/58 (10%)
Frame = +3
Query: 567 PKXYXXXPPPPPPXXFXKKKKXXGGAPPXXKKKXK------XXXPPPPXXXXXGGGGG 722
P PPPPPP F PP PPPP G GG
Sbjct: 605 PHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 662
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.7 bits (61), Expect = 8.8
Identities = 17/58 (29%), Positives = 17/58 (29%), Gaps = 6/58 (10%)
Frame = +3
Query: 567 PKXYXXXPPPPPPXXFXKKKKXXGGAPPXXKKKXK------XXXPPPPXXXXXGGGGG 722
P PPPPPP F PP PPPP G GG
Sbjct: 431 PHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 488
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 28.7 bits (61), Expect = 8.8
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = -3
Query: 691 GGGGXXXXXXXXXWGGAPPXXFFFXKXXXGGGGGGXXXYXFGG 563
GGGG WGG + GGGGGG Y GG
Sbjct: 234 GGGGGGRDRDRGGWGGGGGG-----RGYGGGGGGGGYGYGGGG 271
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 8.8
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = +3
Query: 588 PPPPPPXXFXKKKKXXGGAPPXXKKKXKXXXPPPP 692
PPPP P ++++ PP PPPP
Sbjct: 511 PPPPAPGPHKEQRRSTSKDPPRPAPPPVSSIPPPP 545
Score = 28.7 bits (61), Expect = 8.8
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +3
Query: 588 PPPPPPXXFXKKKKXXGGAPPXXKKKXKXXXPPPPXXXXXG 710
PPPPPP + G PP PPPP G
Sbjct: 561 PPPPPPPL---PQNLSGAPPPPPPPPPMLGGPPPPPPPPGG 598
>Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 25.0 bits (52), Expect(2) = 9.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 564 PPKXYXXXPPPPPP 605
PP+ PPPPPP
Sbjct: 258 PPREKSVPPPPPPP 271
Score = 21.8 bits (44), Expect(2) = 9.5
Identities = 7/26 (26%), Positives = 12/26 (46%)
Frame = +3
Query: 588 PPPPPPXXFXKKKKXXGGAPPXXKKK 665
PPPPPP ++ P +++
Sbjct: 269 PPPPPPKPVSREPSRARSMTPGTRER 294
>AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 25.0 bits (52), Expect(2) = 9.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 564 PPKXYXXXPPPPPP 605
PP+ PPPPPP
Sbjct: 258 PPREKSVPPPPPPP 271
Score = 21.8 bits (44), Expect(2) = 9.5
Identities = 7/26 (26%), Positives = 12/26 (46%)
Frame = +3
Query: 588 PPPPPPXXFXKKKKXXGGAPPXXKKK 665
PPPPPP ++ P +++
Sbjct: 269 PPPPPPKPVSREPSRARSMTPGTRER 294
>Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 25.0 bits (52), Expect(2) = 9.6
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 564 PPKXYXXXPPPPPP 605
PP+ PPPPPP
Sbjct: 243 PPREKSVPPPPPPP 256
Score = 21.8 bits (44), Expect(2) = 9.6
Identities = 7/26 (26%), Positives = 12/26 (46%)
Frame = +3
Query: 588 PPPPPPXXFXKKKKXXGGAPPXXKKK 665
PPPPPP ++ P +++
Sbjct: 254 PPPPPPKPVSREPSRARSMTPGTRER 279
>AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 25.0 bits (52), Expect(2) = 9.6
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 564 PPKXYXXXPPPPPP 605
PP+ PPPPPP
Sbjct: 243 PPREKSVPPPPPPP 256
Score = 21.8 bits (44), Expect(2) = 9.6
Identities = 7/26 (26%), Positives = 12/26 (46%)
Frame = +3
Query: 588 PPPPPPXXFXKKKKXXGGAPPXXKKK 665
PPPPPP ++ P +++
Sbjct: 254 PPPPPPKPVSREPSRARSMTPGTRER 279
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 25.8 bits (54), Expect(2) = 9.9
Identities = 10/34 (29%), Positives = 14/34 (41%)
Frame = +3
Query: 591 PPPPPXXFXKKKKXXGGAPPXXKKKXKXXXPPPP 692
PPPPP + ++ PP + P PP
Sbjct: 50 PPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPP 83
Score = 24.6 bits (51), Expect(2) = 9.9
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +3
Query: 567 PKXYXXXPPPPPP 605
P Y PPPPPP
Sbjct: 125 PAPYQQQPPPPPP 137
Score = 22.2 bits (45), Expect(2) = 9.9
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +3
Query: 588 PPPPPPXXFXKKKKXXGGAPP 650
PPPPPP + PP
Sbjct: 133 PPPPPPPHYPPPPPHYPPPPP 153
Score = 21.0 bits (42), Expect(2) = 9.9
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +3
Query: 588 PPPPPP 605
PPPPPP
Sbjct: 26 PPPPPP 31
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.148 0.507
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,110,451
Number of Sequences: 27780
Number of extensions: 374680
Number of successful extensions: 3495
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2492
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3370329934
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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