Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_J22
         (852 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_02_0256 + 13528331-13528765                                        130   1e-30
02_02_0566 + 11567415-11567843                                        128   6e-30
03_01_0098 - 773958-774144,775776-775902,776013-776088,776208-77...    35   0.095
01_06_1385 + 36930377-36930681,36930769-36930895,36931515-36932360     30   2.7  
06_01_0447 + 3159092-3159543,3159699-3159825,3160640-3161392           29   4.7  
07_03_1604 - 28089032-28089079,28089161-28089371,28089484-280898...    29   6.2  

>06_02_0256 + 13528331-13528765
          Length = 144

 Score =  130 bits (315), Expect = 1e-30
 Identities = 59/70 (84%), Positives = 63/70 (90%)
 Frame = +3

Query: 210 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIGLRDYQ 389
           LVFKEDGQEYAQVT+MLGNGR EA+C DG KRLCHIRGK+ KKVWI  GDIIL+GLRDYQ
Sbjct: 26  LVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQ 85

Query: 390 DAKADVILKY 419
           D KADVILKY
Sbjct: 86  DDKADVILKY 95



 Score = 35.1 bits (77), Expect = 0.072
 Identities = 17/30 (56%), Positives = 22/30 (73%)
 Frame = +1

Query: 430 EARNLKTYGEFPETVRINETVVYSVDGLDE 519
           EAR LK YGE P+T+R+NE V   VDG ++
Sbjct: 99  EARLLKAYGELPDTLRLNEGV--DVDGPED 126


>02_02_0566 + 11567415-11567843
          Length = 142

 Score =  128 bits (309), Expect = 6e-30
 Identities = 57/70 (81%), Positives = 61/70 (87%)
 Frame = +3

Query: 210 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIGLRDYQ 389
           LVFKEDGQEYAQV +MLGNGR EA C DG KRLCHIRGK+ KKVWI  GDI+L+GLRDYQ
Sbjct: 26  LVFKEDGQEYAQVARMLGNGRCEAQCIDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQ 85

Query: 390 DAKADVILKY 419
           D KADVILKY
Sbjct: 86  DDKADVILKY 95



 Score = 34.7 bits (76), Expect = 0.095
 Identities = 17/31 (54%), Positives = 19/31 (61%)
 Frame = +1

Query: 430 EARNLKTYGEFPETVRINETVVYSVDGLDED 522
           EAR LK YGE P+ VR+NE VV   D    D
Sbjct: 99  EARLLKAYGEIPDHVRLNEGVVDEDDAAAHD 129


>03_01_0098 -
           773958-774144,775776-775902,776013-776088,776208-776321
          Length = 167

 Score = 34.7 bits (76), Expect = 0.095
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = +3

Query: 225 DGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILI 371
           +G+   QV  + G+  +E M   G+K L     K +K  WI  G+ +++
Sbjct: 21  EGESIMQVLALRGSNVIEVMDAKGVKSLALFPAKFQKSFWIKNGNFVVV 69


>01_06_1385 + 36930377-36930681,36930769-36930895,36931515-36932360
          Length = 425

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 20/75 (26%), Positives = 35/75 (46%)
 Frame = +3

Query: 210 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINQGDIILIGLRDYQ 389
           +V     +++A + K L  GR+   C +  +   H+R  ++K VW  + D +LI      
Sbjct: 107 MVILHGDRKWATIAKSLP-GRIGKQCRE--RWTNHLRPDIKKDVWTEEDDRMLIEAHKTY 163

Query: 390 DAKADVILKYTPXRS 434
             +  VI +  P RS
Sbjct: 164 GNRWSVIARCLPGRS 178


>06_01_0447 + 3159092-3159543,3159699-3159825,3160640-3161392
          Length = 443

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +3

Query: 312 HIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPXRS*ES-KDVW 455
           H+R  ++K  W  + DI+LI        K   I K+ P R+  S K+ W
Sbjct: 187 HLRPNIKKDTWSEEEDIVLIQTHKEVGNKWAEIAKHLPGRTENSIKNHW 235


>07_03_1604 -
           28089032-28089079,28089161-28089371,28089484-28089853,
           28090034-28090199
          Length = 264

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -2

Query: 254 LCDLGVLLSVFLKDQLTFFSFIFVLSSPPIFS 159
           +  L ++L VF+  Q   F+F  V SSPP+FS
Sbjct: 1   MAPLLLILLVFMPCQTMLFTFDRVTSSPPLFS 32


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,601,013
Number of Sequences: 37544
Number of extensions: 239145
Number of successful extensions: 598
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)