Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_J21
         (929 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    24   1.5  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    24   1.5  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    23   4.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   4.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   4.5  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   5.9  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 559 CDRHWLCIRLRGQQE 603
           CDR+W C+   GQQE
Sbjct: 42  CDRYWECV--NGQQE 54


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -2

Query: 619 KSALTALVVPASVYTASVGHKQ 554
           K+A   LV+  SVY++SVG+ Q
Sbjct: 131 KNAYFQLVLSISVYSSSVGYTQ 152


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 158 QSKPSTPEPEECTTKLPEEL 217
           + KP TP+ EE    LP+ L
Sbjct: 51  EKKPCTPDGEELKRVLPDAL 70


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = -3

Query: 525  MMFLPFN-SGTSSGTLRVTVSPKPS*PHALR 436
            +++  FN +  S GT  VTV PKP  P+A++
Sbjct: 1020 VIYSVFNMNNVSWGTREVTVVPKPD-PNAVQ 1049


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = -3

Query: 525  MMFLPFN-SGTSSGTLRVTVSPKPS*PHALR 436
            +++  FN +  S GT  VTV PKP  P+A++
Sbjct: 1020 VIYSVFNMNNVSWGTREVTVVPKPD-PNAVQ 1049


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 322 EPLYIS*VHRSSVPTYSQWVHCRTFSFGVRRGRSLHVW 435
           +PLY+    + + P Y  W        G RR R+L +W
Sbjct: 329 DPLYLKHEQQGAAPDYRHW----QIPLG-RRFRALKLW 361


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,723
Number of Sequences: 336
Number of extensions: 4902
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26065116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)