Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_J21
(929 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_59432| Best HMM Match : MORN (HMM E-Value=9.3e-26) 78 1e-14
SB_46796| Best HMM Match : RCC1 (HMM E-Value=3e-14) 75 6e-14
SB_45009| Best HMM Match : RCC1 (HMM E-Value=7.6e-21) 74 2e-13
SB_17592| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 2e-12
SB_6739| Best HMM Match : RCC1 (HMM E-Value=1.6e-34) 69 5e-12
SB_25012| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 7e-12
SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 7e-11
SB_20583| Best HMM Match : RCC1 (HMM E-Value=6.2e-08) 62 6e-10
SB_7970| Best HMM Match : RCC1 (HMM E-Value=0) 60 2e-09
SB_17186| Best HMM Match : RCC1 (HMM E-Value=1.5e-19) 60 3e-09
SB_2363| Best HMM Match : RCC1 (HMM E-Value=0.00041) 60 3e-09
SB_5067| Best HMM Match : RCC1 (HMM E-Value=4.5e-16) 59 6e-09
SB_18907| Best HMM Match : RCC1 (HMM E-Value=0) 51 2e-06
SB_55819| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_30518| Best HMM Match : FYVE (HMM E-Value=1.2e-18) 48 1e-05
SB_29134| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 1e-04
SB_32347| Best HMM Match : RCC1 (HMM E-Value=0.00072) 38 0.015
SB_31129| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.062
SB_31780| Best HMM Match : Pkinase (HMM E-Value=0) 35 0.082
SB_34545| Best HMM Match : RCC1 (HMM E-Value=0.027) 33 0.33
SB_22290| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_50916| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_48230| Best HMM Match : DUF152 (HMM E-Value=1.5) 29 5.4
SB_41259| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_39161| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_55305| Best HMM Match : Pre-SET (HMM E-Value=4.6) 29 7.1
>SB_59432| Best HMM Match : MORN (HMM E-Value=9.3e-26)
Length = 1362
Score = 77.8 bits (183), Expect = 1e-14
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Frame = +2
Query: 392 HSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTDT 571
H+VL++ E + FG N GQLGFGD R P +P +GK ++ A G H++ + D
Sbjct: 47 HTVLLTFNHEVFAFGDNNFGQLGFGDRNRRRDPAKLPFFEGKRVVDIACGGQHSVVLLDN 106
Query: 572 GCVYACGDNKSGQCGLG--NTTPQILKPTRIKYNGTPIVK 685
G YA GD+ SGQCG+G + + PT++ + TP +K
Sbjct: 107 GETYAWGDSSSGQCGIGKCDNNSAVDAPTKVAF--TPEMK 144
Score = 38.7 bits (86), Expect = 0.007
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Frame = +2
Query: 362 RLIVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPE------LVPELKG-KN 520
R++ C HSV++ + GE Y +G ++ GQ G G S + PE+K ++
Sbjct: 89 RVVDIACGGQHSVVLLDNGETYAWGDSSSGQCGIGKCDNNSAVDAPTKVAFTPEMKSPQS 148
Query: 521 IIHAAVGRHHTL-FVTDTGC-VYACGD 595
+ H + +H T TD ACGD
Sbjct: 149 VFHLSEEKHETQPQATDVKIKSIACGD 175
Score = 36.7 bits (81), Expect = 0.027
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +2
Query: 476 TRSVPELVPELKGKNIIHAAVGRHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTR 655
T P++ P I A+G HT+ +T V+A GDN GQ G G+ + P +
Sbjct: 23 TSPEPKISPLSLPHGISKVALGTAHTVLLTFNHEVFAFGDNNFGQLGFGDRNRR-RDPAK 81
Query: 656 IK-YNGTPIVKVGC 694
+ + G +V + C
Sbjct: 82 LPFFEGKRVVDIAC 95
Score = 28.3 bits (60), Expect = 9.4
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +2
Query: 479 RSVPELVPELKGKNIIHAAVGRHHTLFVT 565
RSVP LV +L II A G H+L +T
Sbjct: 559 RSVPCLVEDLSSTGIIKVAAGTFHSLALT 587
>SB_46796| Best HMM Match : RCC1 (HMM E-Value=3e-14)
Length = 350
Score = 75.4 bits (177), Expect = 6e-14
Identities = 44/107 (41%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Frame = +2
Query: 437 RNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTDTGCVYACGDNKSGQCG 616
RN GQLG G T VP+++ LK NI+ A+ GR HTL +TD G V+ GDNK GQ G
Sbjct: 2 RNDKGQLGHGTTERCDVPKVIDRLKMHNIVQASCGRGHTLILTDAGLVFGFGDNKLGQIG 61
Query: 617 LGNTTPQILK-PTRIKY-NGTPIVKVGCXCPXXXXXXXCNGNLHSFG 751
G+ P L P +I + + KV C NG++ SFG
Sbjct: 62 QGHQKPTSLPCPLQIMHPTDKKVTKVCCGAEFSMLLDE-NGDIFSFG 107
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Frame = +2
Query: 353 RRYRLIVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSV--PELVPELKGKNII 526
+ + ++ + C GH++++++ G + FG N GQ+G G S+ P + K +
Sbjct: 26 KMHNIVQASCGRGHTLILTDAGLVFGFGDNKLGQIGQGHQKPTSLPCPLQIMHPTDKKVT 85
Query: 527 HAAVGRHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQIL 643
G ++ + + G +++ G + GQ G NT Q +
Sbjct: 86 KVCCGAEFSMLLDENGDIFSFGSPEYGQLG-HNTDGQYI 123
Score = 30.3 bits (65), Expect = 2.3
Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 1/106 (0%)
Frame = +2
Query: 380 CTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGK-NIIHAAVGRHHTL 556
C H++ + E+G +T+G G+LG VP L+ K N G +++
Sbjct: 165 CGNNHTMALDEQGRVFTWGFGGYGRLGHQQPKDEHVPRLLTFFNTKGNPSVIFAGSTYSM 224
Query: 557 FVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRIKYNGTPIVKVGC 694
V G +Y G K Q G P KP + +G + VGC
Sbjct: 225 AVC-MGQLYFWGQTK--QSGEAAMYP---KPVQ-DLSGWQVRSVGC 263
>SB_45009| Best HMM Match : RCC1 (HMM E-Value=7.6e-21)
Length = 595
Score = 73.7 bits (173), Expect = 2e-13
Identities = 39/84 (46%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Frame = +2
Query: 392 HSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTDT 571
H +V+ E AYT+G N+ GQLG GD V R P LV LKGK I A G +++FVTD
Sbjct: 95 HVAVVTLERAAYTWGDNSRGQLGQGDLVNRDKPTLVDTLKGKAITRACCGDKYSVFVTDN 154
Query: 572 GCVYACGDNKSGQCGLG--NTTPQ 637
G V CG + +G G G ++TP+
Sbjct: 155 GIVMTCGSSDTGCLGHGDWSSTPR 178
Score = 58.4 bits (135), Expect = 8e-09
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +2
Query: 380 CTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVP-ELVPELKGKNIIHAAVGRHHTL 556
C H +V EG +T+G+ A G+LG G+ + VP ++ E +I G T+
Sbjct: 195 CGPHHVAVVCSEGLVFTWGKGADGRLGLGNEDDQCVPCQVTMEDANVSIRDVRCGLDGTM 254
Query: 557 FVTDTGCVYACGDNKSGQCGLGN 625
F+TDTG + ACG N + + GL N
Sbjct: 255 FLTDTGALLACGSNANNKLGLNN 277
Score = 52.8 bits (121), Expect = 4e-07
Identities = 28/86 (32%), Positives = 40/86 (46%)
Frame = +2
Query: 380 CTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLF 559
C +SV V++ G T G + G LG GD + P+L+ L ++ + G HH
Sbjct: 143 CGDKYSVFVTDNGIVMTCGSSDTGCLGHGDWSSTPRPKLIEGLLSVDVTAVSCGPHHVAV 202
Query: 560 VTDTGCVYACGDNKSGQCGLGNTTPQ 637
V G V+ G G+ GLGN Q
Sbjct: 203 VCSEGLVFTWGKGADGRLGLGNEDDQ 228
Score = 47.2 bits (107), Expect = 2e-05
Identities = 25/79 (31%), Positives = 38/79 (48%)
Frame = +2
Query: 356 RYRLIVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAA 535
RYR++ HS ++ E G +T G N GQLG G+T R P V +L+ + +
Sbjct: 308 RYRVVDMALGPTHSAVLVEPGHVHTLGSNQDGQLGSGNTKPRDAPASVKQLEDQTVTMVF 367
Query: 536 VGRHHTLFVTDTGCVYACG 592
G T+ T+ +Y G
Sbjct: 368 CGYGFTVAGTNDNTLYFWG 386
Score = 39.1 bits (87), Expect = 0.005
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +2
Query: 482 SVPELVPELKGKNIIHAAVGRHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQ 637
+ P V L ++ A+G H+ + + G V+ G N+ GQ G GNT P+
Sbjct: 298 TTPTAVKALSRYRVVDMALGPTHSAVLVEPGHVHTLGSNQDGQLGSGNTKPR 349
>SB_17592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3592
Score = 70.5 bits (165), Expect = 2e-12
Identities = 41/106 (38%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Frame = +2
Query: 380 CTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLF 559
C A S+ +S G +T+G+ +LG G+ P++V L+GK I+ AVG H L
Sbjct: 1687 CGAQFSLALSTSGLVWTWGKGDYYRLGHGNDTHVRKPQIVDGLRGKKIVDVAVGALHCLA 1746
Query: 560 VTDTGCVYACGDNKSGQCGLGNTTPQILKPTRIK-YNGTPIVKVGC 694
VTD+G V+A GDN GQ G NTT +P + G I +V C
Sbjct: 1747 VTDSGQVFAWGDNDHGQQG-NNTTTVNRRPQLVNGLEGQKITRVAC 1791
Score = 64.9 bits (151), Expect = 9e-11
Identities = 43/108 (39%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Frame = +2
Query: 380 CTAGHSVLVSEEGEAYTFGRNACGQLGFG--DTVTRSVPELVPELKGKNIIHAAVGRHHT 553
C + SV ++ G YT+G+ +LG G D V R P+ V L+GK +I A G H
Sbjct: 2632 CGSQFSVALTRSGAVYTWGKGDYYRLGHGVDDHVRR--PKRVAALQGKKVITIATGSLHC 2689
Query: 554 LFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRI-KYNGTPIVKVGC 694
+ TDTG VY GDN GQ G G TT I +P + G I +V C
Sbjct: 2690 VASTDTGEVYTWGDNDEGQLGDG-TTNAIARPRLVTALQGKKISRVAC 2736
Score = 64.1 bits (149), Expect = 2e-10
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Frame = +2
Query: 380 CTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGR--HHT 553
C HS +++ E YT+G+ G+LG GD+ + +P++V L+G +I A G T
Sbjct: 2526 CGGSHSACITQNHELYTWGKGRYGRLGHGDSEDQLLPKVVEALRGNRVIDVACGSGDAQT 2585
Query: 554 LFVTDTGCVYACGDNKSGQCGLGNT 628
L +TD CV++ GD G+ G G +
Sbjct: 2586 LCLTDDDCVWSWGDGDYGKLGRGGS 2610
Score = 61.7 bits (143), Expect = 8e-10
Identities = 35/107 (32%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Frame = +2
Query: 380 CTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRH--HT 553
C + HS + GE YT+G G+LG GD T P+ V +I A G T
Sbjct: 1581 CGSSHSAAILSSGELYTWGLGEYGRLGHGDNYTHLKPKKVQSFTSHRVIDIACGSRDAQT 1640
Query: 554 LFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRIKYNGTPIVKVGC 694
L +TD G V++ GD G+ G G + + K G + KV C
Sbjct: 1641 LALTDDGTVWSWGDGDFGKLGRGGSEGCSVPNPVEKLQGQGVCKVAC 1687
Score = 48.4 bits (110), Expect = 8e-06
Identities = 25/55 (45%), Positives = 31/55 (56%)
Frame = +2
Query: 392 HSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTL 556
H V ++ GE YT+G N GQLG G T + P LV L+GK I A G HT+
Sbjct: 2688 HCVASTDTGEVYTWGDNDEGQLGDGTTNAIARPRLVTALQGKKISRVACGSAHTI 2742
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/102 (22%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Frame = +2
Query: 392 HSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTDT 571
H++ ++ EG+ +++G G+LG G+ + P+L+ K + + G H+ + +
Sbjct: 1533 HAMALTIEGKLFSWGEGEDGKLGHGNRMNCDHPKLIDTFKSSCVRDMSCGSSHSAAILSS 1592
Query: 572 GCVYACGDNKSGQCGLGNTTPQILKPTRIK-YNGTPIVKVGC 694
G +Y G + G+ G G+ LKP +++ + ++ + C
Sbjct: 1593 GELYTWGLGEYGRLGHGDNYTH-LKPKKVQSFTSHRVIDIAC 1633
Score = 40.3 bits (90), Expect = 0.002
Identities = 27/72 (37%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +2
Query: 416 GEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLF-VTDTGCVYACG 592
G Y +G N GQLG + +P+ + L + VG TLF VT G VYA G
Sbjct: 2380 GTIYGWGHNHRGQLGSLEGAKVKLPQTIEALASIRPVQI-VGGEQTLFAVTAEGKVYATG 2438
Query: 593 DNKSGQCGLGNT 628
G+ GLG T
Sbjct: 2439 YGHGGRLGLGGT 2450
Score = 40.3 bits (90), Expect = 0.002
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Frame = +2
Query: 404 VSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAV--GRHHTLFVTDTGC 577
V+ EG+ Y G G+LG G T T + +++ L+ + AV G H + ++ G
Sbjct: 2428 VTAEGKVYATGYGHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGD 2487
Query: 578 VYACGDNKSGQCGLGNTT----PQILKPTRIKYNGTPIVKVGC 694
VY+ G+ G+ G GN P++++ R G ++ + C
Sbjct: 2488 VYSWGEGDDGKLGHGNRNSCDRPRVIEALR----GKGVIDISC 2526
Score = 37.9 bits (84), Expect = 0.012
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Frame = +2
Query: 410 EEGE--AYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLF-VTDTGCV 580
+EG+ + +G N QLG VP L E G + G TLF V+ G V
Sbjct: 1430 QEGQIKVFVWGLNDKDQLGGLKGSKIKVPVL-SEFIGALKVQQIAGGSKTLFAVSHDGKV 1488
Query: 581 YACGDNKSGQCGLGNTTPQILKPTRIK 661
+ACG++ +G+ GLG + + P +I+
Sbjct: 1489 FACGESTNGRLGLGPLSANVTVPRQIE 1515
>SB_6739| Best HMM Match : RCC1 (HMM E-Value=1.6e-34)
Length = 1790
Score = 68.9 bits (161), Expect = 5e-12
Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 2/113 (1%)
Frame = +2
Query: 362 RLIVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVG 541
++I C + HS V+ EGE YT+GR G+LG G + + VP LV L+G +II A G
Sbjct: 596 QVIRISCGSTHSAAVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACG 655
Query: 542 R--HHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRIKYNGTPIVKVGC 694
HTL D G V++ GD G+ G G + + + G + KV C
Sbjct: 656 SGDAHTLAAADDGTVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYC 708
Score = 67.7 bits (158), Expect = 1e-11
Identities = 36/109 (33%), Positives = 54/109 (49%)
Frame = +2
Query: 368 IVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRH 547
+V+ H + ++ EGE Y++G G+LG GDT R P LV L GK +I + G
Sbjct: 546 VVTHTDGKHFLALTREGEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAGKQVIRISCGST 605
Query: 548 HTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRIKYNGTPIVKVGC 694
H+ VT G +Y G G+ G G++ Q++ G I+ V C
Sbjct: 606 HSAAVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVAC 654
Score = 57.2 bits (132), Expect = 2e-08
Identities = 43/129 (33%), Positives = 62/129 (48%), Gaps = 2/129 (1%)
Frame = +2
Query: 380 CTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLF 559
C A S+ ++ +G +T+G+ +LG G P+LV L GK+++ +VG H L
Sbjct: 708 CGAQFSLALTRDGSVWTWGKGEGFRLGHGTEDHVRHPKLVEALDGKHVVDVSVGSIHCLA 767
Query: 560 VTDTGCVYACGDNKSGQCGLGNTTPQIL-KPTRIK-YNGTPIVKVGCXCPXXXXXXXCNG 733
+TD G VY G N GQ LG+ QI +PT + IV + C P C G
Sbjct: 768 LTDAGEVYCWGRNDQGQ--LGDIDCQIRPEPTLVSGLASKGIVGIACG-PAQSFAWSCAG 824
Query: 734 NLHSFGCRV 760
S G R+
Sbjct: 825 Q-WSVGTRL 832
>SB_25012| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 436
Score = 68.5 bits (160), Expect = 7e-12
Identities = 43/121 (35%), Positives = 58/121 (47%), Gaps = 16/121 (13%)
Frame = +2
Query: 377 GCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTL 556
GC AG E GE +T+G N QLG G+T P L+ +GKNI A G HHTL
Sbjct: 102 GCDAGCDS--GENGEVFTWGHNGYSQLGNGNTNQGLYPSLLTSFQGKNITQLACGSHHTL 159
Query: 557 F----------------VTDTGCVYACGDNKSGQCGLGNTTPQILKPTRIKYNGTPIVKV 688
++D GC+Y+ G N GQ G GN ++ PT+I + V++
Sbjct: 160 VLNDEGEILCGYAHSLALSDAGCIYSWGANSYGQLGTGNKA-HLVTPTKIAVDKGRFVEI 218
Query: 689 G 691
G
Sbjct: 219 G 219
>SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 65.3 bits (152), Expect = 7e-11
Identities = 39/111 (35%), Positives = 56/111 (50%)
Frame = +2
Query: 338 HKFTDRRYRLIVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGK 517
+KF R ++ C HS +V+E G Y+FG GQLG GD VP+++ L +
Sbjct: 28 NKFWIRDDAVVNLSCGDEHSAVVTESGHLYSFGCGGDGQLGHGDAEDSHVPKIIEGLDVQ 87
Query: 518 NIIHAAVGRHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRIKYNG 670
H A G + +T+ G +Y G GQ GLG T +I PTR+ +G
Sbjct: 88 KYKHLACGSDFSAAITENGELYTWGSCGEGQNGLGEDT-EI--PTRLHLHG 135
Score = 62.9 bits (146), Expect = 4e-10
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Frame = +2
Query: 362 RLIVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRS-VPELVPELKGKNIIHAAV 538
+++V+ C A + +V++ G YTFG+ GQLG G ++ + PE +P + +
Sbjct: 370 QVVVAACGAEFTAVVTKNGSVYTFGQGNQGQLGLGSSMMETEFPERIPLFEKVKARTVSC 429
Query: 539 GRHHTLFVTDTGCVYACGDNKSGQCGLGNTT-PQILKPTRIK-YNGTPIVKVGC 694
G T +T G +Y GD + G+ GLG+ KP ++K +N + V C
Sbjct: 430 GESFTAVITKHGNLYTFGDGRHGKLGLGDECFSNTFKPEKVKRFNNFTVKMVTC 483
>SB_20583| Best HMM Match : RCC1 (HMM E-Value=6.2e-08)
Length = 970
Score = 62.1 bits (144), Expect = 6e-10
Identities = 39/116 (33%), Positives = 55/116 (47%), Gaps = 17/116 (14%)
Frame = +2
Query: 362 RLIVSGCTAGHSVLVSE---------EGEAYTFGRNACGQLGFGDTVTRSVPELVPEL-- 508
R++ C A H+VL++E G AY++GR G LG G ++ + P V L
Sbjct: 161 RVMSMACGAYHTVLLAEGYGWLGNLSSGVAYSWGRGGNGALGHGTLLSLARPSYVKRLYH 220
Query: 509 ------KGKNIIHAAVGRHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRI 658
K + A GR H+ F+T GCVY CG N+ GQ G L PT++
Sbjct: 221 GDKDGKDAKTVSQVAAGRAHSAFLTKDGCVYTCGSNQYGQLGYYTKETYKLLPTKV 276
Score = 35.1 bits (77), Expect = 0.082
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 503 ELKGKNIIHAAVGRHHTLFVTDTGCVYACGDNKSGQCG 616
EL K I+ A G H +TD+G + CG K GQ G
Sbjct: 487 ELDSKIIVQIACGAFHVAALTDSGELLTCGTGKHGQLG 524
>SB_7970| Best HMM Match : RCC1 (HMM E-Value=0)
Length = 651
Score = 60.5 bits (140), Expect = 2e-09
Identities = 31/106 (29%), Positives = 58/106 (54%)
Frame = +2
Query: 344 FTDRRYRLIVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNI 523
F D+R + +G +GHS+ ++ +G +T+G A G+LG GD + +P+ + G+
Sbjct: 229 FADQRVVAVSAG--SGHSLALTADGAVFTWGFGAHGRLGHGDEQHQLLPKKIEAFVGQRA 286
Query: 524 IHAAVGRHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRIK 661
+ + G H+L +T G V + G G+ G G+ Q+L P +++
Sbjct: 287 VAVSAGPRHSLAITADGAVMSWGHGHRGKLGHGDEQNQLL-PNKVE 331
Score = 58.4 bits (135), Expect = 8e-09
Identities = 27/94 (28%), Positives = 50/94 (53%)
Frame = +2
Query: 362 RLIVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVG 541
R + A H + ++ +G +++G G+LG GD + +P+ V G+ ++ + G
Sbjct: 77 RAVSMSAGAAHCLALTADGAVWSWGHGGQGRLGHGDAQHQLLPKKVEAFAGQRVVAVSAG 136
Query: 542 RHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQIL 643
H+L +T G V++ G + G+ G GNT Q+L
Sbjct: 137 YFHSLALTADGRVWSWGYGRDGRLGHGNTQHQLL 170
Score = 54.4 bits (125), Expect = 1e-07
Identities = 28/109 (25%), Positives = 53/109 (48%)
Frame = +2
Query: 362 RLIVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVG 541
R++ HS+ + +G +++G GQLG GD + +P+ + G ++ + G
Sbjct: 389 RVVAVSAGEYHSLAIIADGAVWSWGFGYHGQLGHGDQQIQLLPKQIEAFAGLRVVAVSAG 448
Query: 542 RHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRIKYNGTPIVKV 688
H+L +T G +++ G SG+ G G+ Q+L + G +V V
Sbjct: 449 AAHSLAITADGALWSWGYGDSGRLGHGDEQDQLLPKKVEAFVGPHVVAV 497
Score = 53.6 bits (123), Expect = 2e-07
Identities = 25/100 (25%), Positives = 48/100 (48%)
Frame = +2
Query: 362 RLIVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVG 541
R++ HS ++ +G +++G A GQLG GD + +P+ V G+ ++ + G
Sbjct: 546 RVVAVSAGLRHSGALTADGALWSWGEGAYGQLGHGDEQRQLLPKKVEAFAGQRVVAVSAG 605
Query: 542 RHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRIK 661
+H+L ++ G G + G G G L P +++
Sbjct: 606 AYHSLAISADGAFLTWGQGEDGCLGHGEDLSDQLLPKKVE 645
Score = 52.0 bits (119), Expect = 7e-07
Identities = 26/90 (28%), Positives = 51/90 (56%)
Frame = +2
Query: 392 HSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTDT 571
HS+ ++ +G +++G G+LG G+T + +P+ + L G+ ++ + G H+L +T
Sbjct: 139 HSLALTADGRVWSWGYGRDGRLGHGNTQHQLLPKKLEGLAGQRVVAVSAGIAHSLAITAD 198
Query: 572 GCVYACGDNKSGQCGLGNTTPQILKPTRIK 661
G V++ G G+ G G Q+L P +I+
Sbjct: 199 GSVWSWGWGGHGRLGHGEEKTQLL-PKKIE 227
>SB_17186| Best HMM Match : RCC1 (HMM E-Value=1.5e-19)
Length = 637
Score = 59.7 bits (138), Expect = 3e-09
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Frame = +2
Query: 380 CTAGHSVLVSEEGEAYTFGRNACG-QLGFGDT-VTRSVPELVPELKGKNIIHAAVGRHHT 553
C + S+ ++ G+ Y +G CG LG G T + P+L+ L+ +++ +VG H
Sbjct: 518 CGSQCSLALTSTGQVYVWG---CGPSLGTGSVDATSATPKLLLALQSHSVVDISVGDSHC 574
Query: 554 LFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRI 658
+ +T VYA G+N GQCG G+ T I KP ++
Sbjct: 575 VALTQDNNVYAWGNNSMGQCGQGHCTTPITKPKKV 609
Score = 52.4 bits (120), Expect = 5e-07
Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +2
Query: 389 GHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHA-AVGRHHTLFVT 565
GH++ ++ +G+ Y++G G+LG G++ T+ +P+LV G ++ A G H+ VT
Sbjct: 395 GHTLALTLDGKVYSWGDGDYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAAVT 454
Query: 566 DTGCVYACGDNKSGQCG 616
+ G +Y G+ G+ G
Sbjct: 455 EDGELYTWGEGDYGRLG 471
Score = 37.9 bits (84), Expect = 0.012
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Frame = +2
Query: 401 LVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVP---ELKGKNIIHAAVGRHHTLFVTDT 571
++ +G + G+ + G+LG GD+ ++ + + E K++ + HTL +T
Sbjct: 344 VIFPDGFVHACGKGSYGRLGLGDSTNQTQLKRLNFDNECLVKSVSSSKGSDGHTLALTLD 403
Query: 572 GCVYACGDNKSGQCGLGNTTPQ 637
G VY+ GD G+ G GN+ Q
Sbjct: 404 GKVYSWGDGDYGKLGHGNSQTQ 425
Score = 37.1 bits (82), Expect = 0.020
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 24/108 (22%)
Frame = +2
Query: 392 HSVLVSEEGEAYTFGRNACGQL-----------GFGDTVTRSVP----------ELVPEL 508
HS V+E+GE YT+G G+L G GD +R+VP +++ L
Sbjct: 449 HSAAVTEDGELYTWGEGDYGRLGSCHSIARPVSGHGDNNSRNVPVQVKDVANVGQVIEAL 508
Query: 509 KGKNIIHAAVGRHHTLFVTDTGCVY--ACGDN-KSGQCGLGNTTPQIL 643
+G I G +L +T TG VY CG + +G + TP++L
Sbjct: 509 QGMVIRKVCCGSQCSLALTSTGQVYVWGCGPSLGTGSVDATSATPKLL 556
Score = 32.3 bits (70), Expect = 0.57
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +2
Query: 539 GRHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRIKYNGTPIVK 685
G++ T + G V+ACG G+ GLG++T Q + R+ ++ +VK
Sbjct: 338 GQYCTFVIFPDGFVHACGKGSYGRLGLGDSTNQ-TQLKRLNFDNECLVK 385
>SB_2363| Best HMM Match : RCC1 (HMM E-Value=0.00041)
Length = 234
Score = 59.7 bits (138), Expect = 3e-09
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Frame = +2
Query: 380 CTAGHSVLVSEEGEAYTFGRNACG-QLGFGDT-VTRSVPELVPELKGKNIIHAAVGRHHT 553
C + S+ ++ G+ Y +G CG LG G T + P+L+ L+ +++ +VG H
Sbjct: 15 CGSQCSLALTSTGQVYVWG---CGPSLGTGSVDATSATPKLLLALQSHSVVDISVGDSHC 71
Query: 554 LFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRI 658
+ +T VYA G+N GQCG G+ T I KP ++
Sbjct: 72 VALTQDNNVYAWGNNSMGQCGQGHCTTPITKPKKV 106
>SB_5067| Best HMM Match : RCC1 (HMM E-Value=4.5e-16)
Length = 390
Score = 58.8 bits (136), Expect = 6e-09
Identities = 36/109 (33%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Frame = +2
Query: 380 CTAGHSVLVSEEGEAYTFGRNACGQLGFG----DTVTRSV-PELVPELKGKNIIHAAVGR 544
C HS + +EEGE ++FG N QLG+ D + P V L + ++ A G
Sbjct: 183 CGTRHSFVWTEEGECFSFGNNYSAQLGYDFRKPDFKDNQLKPIYVDTLFNRKVLQVACGS 242
Query: 545 HHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRIKYNGTPIVKVG 691
H+LF+ G V A G N GQ G+GN T G +V G
Sbjct: 243 RHSLFLFSNGHVAAVGCNNRGQIGIGNKTDTFCIQNVPDLTGVTVVACG 291
Score = 54.8 bits (126), Expect = 9e-08
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 7/132 (5%)
Frame = +2
Query: 380 CTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVP--ELKGKNIIHAAVGRHHT 553
C + H+++++ +G +++G GQLG G T T P LVP G I A G H+
Sbjct: 129 CGSSHTLVITGDGRLFSWGNGNSGQLGIGSTNTTLQPHLVPLGVTPGTRIEGVACGTRHS 188
Query: 554 LFVTDTGCVYACGDNKSGQCGLGNTTPQI----LKPTRI-KYNGTPIVKVGCXCPXXXXX 718
T+ G ++ G+N S Q G P LKP + +++V C
Sbjct: 189 FVWTEEGECFSFGNNYSAQLGYDFRKPDFKDNQLKPIYVDTLFNRKVLQVACG-SRHSLF 247
Query: 719 XXCNGNLHSFGC 754
NG++ + GC
Sbjct: 248 LFSNGHVAAVGC 259
Score = 44.4 bits (100), Expect = 1e-04
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Frame = +2
Query: 413 EGEAYTFGRNACGQLGFG--DTVTRSVPELVPELKGKN--IIHAAVGRHHTLFVTDTGCV 580
EG T+G Q G G + V S P L G++ + H A G HTL +T G +
Sbjct: 84 EGFLITWGCGEFAQHGHGHCNDVPISSGLFNPLLVGQDGQVTHIACGSSHTLVITGDGRL 143
Query: 581 YACGDNKSGQCGLGNTTPQILKPTRIKYNGTPIVKV-GCXC 700
++ G+ SGQ G+G+T L+P + TP ++ G C
Sbjct: 144 FSWGNGNSGQLGIGSTN-TTLQPHLVPLGVTPGTRIEGVAC 183
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/85 (29%), Positives = 40/85 (47%)
Frame = +2
Query: 362 RLIVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVG 541
+++ C + HS+ + G G N GQ+G G+ + VP+L G ++ A G
Sbjct: 234 KVLQVACGSRHSLFLFSNGHVAAVGCNNRGQIGIGNKTDTFCIQNVPDLTGVTVV--ACG 291
Query: 542 RHHTLFVTDTGCVYACGDNKSGQCG 616
H L G V+A G +K+ CG
Sbjct: 292 NSHCLAADVQGQVWAWGYSKA--CG 314
>SB_18907| Best HMM Match : RCC1 (HMM E-Value=0)
Length = 444
Score = 50.8 bits (116), Expect = 2e-06
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +2
Query: 410 EEGEAYTFGRNACGQLGFG-DTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTDTGCVYA 586
E G+A T G+ GQLG G DT+ R P + +L+G I+ G HT+ ++ G VY
Sbjct: 47 ESGQALTLGQGDVGQLGLGPDTLERKKPAVPIDLEGVPIVQVESGGMHTVALSKDGKVYT 106
Query: 587 CGDNKSGQCGLGNTT 631
G N G G T+
Sbjct: 107 WGCNDDGALGRETTS 121
Score = 50.8 bits (116), Expect = 2e-06
Identities = 38/113 (33%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Frame = +2
Query: 380 CTAGHSVLVSEEG-EAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNI------IHAAV 538
C + + +V++ G + Y +G N GQLG GD T P V L N I A
Sbjct: 262 CGSFATFVVAKTGSDVYAWGLNNYGQLGTGDVQTWHFPVKVKSLSQLNKSEKDKHITIAN 321
Query: 539 GRHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRI-KYNGTPIVKVGC 694
G+HHT+ G VYA G G+ GLG+ + P I + I KV C
Sbjct: 322 GQHHTIVCDPNGKVYALGRADYGRLGLGDGAKETALPAHITSLDNEVIEKVAC 374
Score = 47.6 bits (108), Expect = 1e-05
Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
Frame = +2
Query: 392 HSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGK----NIIHAAVGRHHTLF 559
H+V +S++G+ YT+G N G LG +T + E P + NI+ + G HT
Sbjct: 94 HTVALSKDGKVYTWGCNDDGALG-RETTSEGEEEFQPGVVSMPDDVNIVMVSAGDSHTAA 152
Query: 560 VTDTGCVYACGD--NKSGQCGLGNTTPQILKPTRIKYNGTPIVKVGCXCPXXXXXXXCNG 733
++D G VYA G + SGQ GL + + I+K+ +G
Sbjct: 153 LSDQGTVYAWGTYRDASGQIGLQPDGVKKKPAVILTSESDRIIKIASG-NDHTAALTTSG 211
Query: 734 NLHSFGC 754
NL + GC
Sbjct: 212 NLFTLGC 218
Score = 44.8 bits (101), Expect = 1e-04
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +2
Query: 392 HSVLVSEEGEAYTFG--RNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLFVT 565
H+ +S++G Y +G R+A GQ+G + P ++ + II A G HT +T
Sbjct: 149 HTAALSDQGTVYAWGTYRDASGQIGLQPDGVKKKPAVILTSESDRIIKIASGNDHTAALT 208
Query: 566 DTGCVYACGDNKSGQCG 616
+G ++ G + GQ G
Sbjct: 209 TSGNLFTLGCAEQGQLG 225
Score = 29.9 bits (64), Expect = 3.1
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +2
Query: 395 SVLVSEEGEAYTFGRNACGQLGFG---DTVTRSVPELVPELKGK--NIIHAAVGRHHTLF 559
S VS++GE Y++G +C QLG G D VT L + ++ + G HT+
Sbjct: 379 SFAVSDKGELYSWGMGSCLQLGNGNDEDDVTTPAKVQGKNLNSETHRVLGVSAGGQHTVI 438
Query: 560 V 562
+
Sbjct: 439 L 439
>SB_55819| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2408
Score = 50.4 bits (115), Expect = 2e-06
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = +2
Query: 386 AGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHT 553
A H + ++ GE + +G N GQLG G + + P ++P+LKGKNI + GR+H+
Sbjct: 1819 AEHVLALTSTGEVWGWGSNVDGQLGLGHSNAQREPCVIPDLKGKNIRQISAGRNHS 1874
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/86 (30%), Positives = 39/86 (45%)
Frame = +2
Query: 380 CTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLF 559
C SV+++ +G ++FG+ G P+ + L I VG H L
Sbjct: 1765 CGTQFSVVLTNDGRVFSFGQERLTGQPEGRLRGPQKPQQIQALASHFIDDVCVGAEHVLA 1824
Query: 560 VTDTGCVYACGDNKSGQCGLGNTTPQ 637
+T TG V+ G N GQ GLG++ Q
Sbjct: 1825 LTSTGEVWGWGSNVDGQLGLGHSNAQ 1850
Score = 41.9 bits (94), Expect = 7e-04
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Frame = +2
Query: 380 CTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRH---H 550
C + +V G G + G+LG G++ + L+G +I A R H
Sbjct: 1460 CGQNCTFVVQVNGTILACGEGSYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGSDGH 1519
Query: 551 TLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRIK 661
+L +TD+G V++ GD G+ G GN+ Q +P +I+
Sbjct: 1520 SLALTDSGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIE 1555
Score = 38.3 bits (85), Expect = 0.009
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +2
Query: 380 CTAGHSVLVSEEGEA-YTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTL 556
C H++++S +G + FG G+LG G ++ P+ + L G G ++
Sbjct: 1712 CGLNHTLVLSADGNTVWAFGDGDYGKLGLGSCTAKTSPQAIDVLAGIGCKKICCGTQFSV 1771
Query: 557 FVTDTGCVYACGDNK-SGQ 610
+T+ G V++ G + +GQ
Sbjct: 1772 VLTNDGRVFSFGQERLTGQ 1790
Score = 29.5 bits (63), Expect = 4.1
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Frame = +2
Query: 521 IIHA---AVGRHHTLFVT-DTGCVYACGDNKSGQCGLGNTT 631
I+H+ A G +HTL ++ D V+A GD G+ GLG+ T
Sbjct: 1704 IVHSFQVACGLNHTLVLSADGNTVWAFGDGDYGKLGLGSCT 1744
>SB_30518| Best HMM Match : FYVE (HMM E-Value=1.2e-18)
Length = 447
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +2
Query: 413 EGEAYTFGRNACGQLGFG-DTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTDTGCVYAC 589
EG ++FG N GQLG D + S + V L I A G H+ + + G ++ C
Sbjct: 240 EGALFSFGENDYGQLGIPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAALAEKGRMFCC 299
Query: 590 GDNKSGQCG 616
GDN GQ G
Sbjct: 300 GDNTYGQLG 308
Score = 34.3 bits (75), Expect = 0.14
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Frame = +2
Query: 380 CTAGHSVLVSEEGEAYTFGRNACGQLGF------GDTVTRSVPELVPELKGKNIIHAAVG 541
C + HS ++E+G + G N GQLG D VT +V V +H A G
Sbjct: 282 CGSFHSAALAEKGRMFCCGDNTYGQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVHVACG 341
Query: 542 RHHTLFVTD 568
HT VT+
Sbjct: 342 DSHTAVVTE 350
>SB_29134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 44.8 bits (101), Expect = 1e-04
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +2
Query: 389 GHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPE--LVPELKGKNIIHAAVGRHHTLFV 562
GH+ ++++ E YT G N GQLG GDT+ R L+P +K H + G +HTL +
Sbjct: 96 GHTAMITDSRELYTCGWNNRGQLGLGDTINRIELHRVLIPPVK-----HVSCGWNHTLAI 150
Query: 563 TDTGCV 580
T V
Sbjct: 151 TGVSWV 156
Score = 42.7 bits (96), Expect = 4e-04
Identities = 25/69 (36%), Positives = 35/69 (50%)
Frame = +2
Query: 434 GRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTDTGCVYACGDNKSGQC 613
G N+ GQL G T P + K +++ G HT +TD+ +Y CG N GQ
Sbjct: 60 GANSYGQLACGHTDDVIKPAVHSNWKD-DVLCITGGGGHTAMITDSRELYTCGWNNRGQL 118
Query: 614 GLGNTTPQI 640
GLG+T +I
Sbjct: 119 GLGDTINRI 127
>SB_32347| Best HMM Match : RCC1 (HMM E-Value=0.00072)
Length = 677
Score = 37.5 bits (83), Expect = 0.015
Identities = 22/63 (34%), Positives = 30/63 (47%)
Frame = +2
Query: 455 LGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTDTGCVYACGDNKSGQCGLGNTTP 634
LG GDT + P V EL K I G +H+L ++ VY+ G GQ GL +
Sbjct: 47 LGQGDTQQHTRPVYVTELSDKKCIAVVCGHYHSLALSADQQVYSWGWGVHGQLGLDSIED 106
Query: 635 QIL 643
+L
Sbjct: 107 ALL 109
Score = 37.1 bits (82), Expect = 0.020
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +2
Query: 380 CTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLF 559
C HS+ +S + + Y++G GQLG +P V L G + A G HT
Sbjct: 74 CGHYHSLALSADQQVYSWGWGVHGQLGLDSIEDALLPSHVTSLSGAFVTQLAAGYSHTAV 133
Query: 560 VTDTGC 577
+T T C
Sbjct: 134 LT-TEC 138
>SB_31129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 160
Score = 35.5 bits (78), Expect = 0.062
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 539 GRHHTLFVTDTGCVYACGDNKSGQCGLGN 625
G T+F+TDTG + ACG N + + GL N
Sbjct: 14 GLDGTMFLTDTGALLACGSNANNKLGLNN 42
>SB_31780| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 964
Score = 35.1 bits (77), Expect = 0.082
Identities = 20/82 (24%), Positives = 35/82 (42%)
Frame = +2
Query: 380 CTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLF 559
C + H + V+ + E + +GR G+LG G P+ + +G G +
Sbjct: 480 CGSSHIMAVTADHEVFAWGRGDNGRLGTGSQQEYWSPKAISLPEGMRARSVHCGVDCSFA 539
Query: 560 VTDTGCVYACGDNKSGQCGLGN 625
+T + ACG N+ + L N
Sbjct: 540 ITLENKLLACGSNRCNKLALDN 561
Score = 34.7 bits (76), Expect = 0.11
Identities = 24/85 (28%), Positives = 33/85 (38%), Gaps = 6/85 (7%)
Frame = +2
Query: 380 CTAGHSVLVSEEGEAYTFGRNACGQLGFG--DTVTRSVPEL----VPELKGKNIIHAAVG 541
C S ++ E + G N C +L D V L VP+ A+G
Sbjct: 532 CGVDCSFAITLENKLLACGSNRCNKLALDNEDGPVEEVAVLRQVSVPDFNSVGTSSVAMG 591
Query: 542 RHHTLFVTDTGCVYACGDNKSGQCG 616
HTL + G +Y+ G N GQ G
Sbjct: 592 TSHTLVLLQNGKLYSFGSNSFGQLG 616
Score = 34.7 bits (76), Expect = 0.11
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +2
Query: 392 HSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTDT 571
H++++ + G+ Y+FG N+ GQLG+ P+LV L ++ + A G ++ V+
Sbjct: 594 HTLVLLQNGKLYSFGSNSFGQLGYVREGVSRFPQLVESL--NDVSYVACGDTFSVAVSSD 651
Query: 572 GCVYAC 589
C
Sbjct: 652 TTAALC 657
>SB_34545| Best HMM Match : RCC1 (HMM E-Value=0.027)
Length = 230
Score = 33.1 bits (72), Expect = 0.33
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +2
Query: 401 LVSEEGEAYTFGRNACGQLGFGDTVTRSVPELV--PELKGKNI 523
LV G YTFGR GQLG G T + P P L+ NI
Sbjct: 34 LVPSSGRVYTFGRGGDGQLGLGVTNNCNSPMTAKGPWLRSNNI 76
>SB_22290| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 485
Score = 30.3 bits (65), Expect = 2.3
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +2
Query: 146 PPAEQSKPSTPEPEECTTKLPEELLKTFYKT--PGVLMIAGLVSWDL-TARRDNNPTKRT 316
PP++Q K PEPE+ T+ EL + K L A D TA + N K
Sbjct: 200 PPSKQEKKEEPEPEKMETETEPELAENEKKAMEEKELGNAAYKKKDFDTAHKHFNNAKEL 259
Query: 317 HPNLYTFH 340
+P+ TF+
Sbjct: 260 NPDNMTFY 267
>SB_50916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1681
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -1
Query: 494 ARERSVSPCLRSRVDHTHCDQTCRLLPLRTPKLNVLQ 384
A R P L R+D +T RLLP TP+ +LQ
Sbjct: 204 AEPREARPKLSERLDDGRDQKTMRLLPRGTPRGRILQ 240
>SB_48230| Best HMM Match : DUF152 (HMM E-Value=1.5)
Length = 579
Score = 29.1 bits (62), Expect = 5.4
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 285 PGGTTIQPNVPTRTFIHFISSPIVG 359
PGGT P+VPT+ ++ S+P+ G
Sbjct: 264 PGGTATIPSVPTQRVVYDQSAPLAG 288
>SB_41259| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 961
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -1
Query: 713 IENSGTX-ILLSRSVFHCI*SELVSRSEVLYSQVRTDRSCCPRKRIHSQCR 564
++NSG +L+ + H + S++E+L + RTDR KR+H + R
Sbjct: 40 LDNSGVRQLLILAHLTHYLIKYFESQNELLTLKQRTDRIVEENKRLHEELR 90
>SB_39161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2103
Score = 28.7 bits (61), Expect = 7.1
Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 5/87 (5%)
Frame = +2
Query: 233 KTPGVLMIAGLVSWDLTAR----RDNNPTKRTHPNLYTF-HKFTDRRYRLIVSGCTAGHS 397
K PG + GLV+ + RD P + LYT +F + L C+A S
Sbjct: 1197 KEPGAIHSTGLVTQESCIVEIPIRDLEPQVHSCAGLYTLKERFNNLESELDYDECSAARS 1256
Query: 398 VLVSEEGEAYTFGRNACGQLGFGDTVT 478
+ + EG G + GFG T
Sbjct: 1257 LDIRYEGSENNLGTFKVTREGFGTIET 1283
>SB_55305| Best HMM Match : Pre-SET (HMM E-Value=4.6)
Length = 490
Score = 28.7 bits (61), Expect = 7.1
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +2
Query: 644 KPTRIKYNGTPIVKVGCXCPXXXXXXXCNGNLHS-FGC 754
KP + YNGT V G CNG +S FGC
Sbjct: 138 KPAAVTYNGTEEVVFGVALVHVSGKVSCNGKGYSPFGC 175
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,613,265
Number of Sequences: 59808
Number of extensions: 600158
Number of successful extensions: 1631
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1608
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2705204627
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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