Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_J18
         (892 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    24   1.4  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    24   1.4  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   5.6  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   7.4  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   7.4  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    21   9.8  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = -2

Query: 270 PTRPQPLN*I*KDDNILHHFLESSFGTMISLRTFKFYSKYFHYTY 136
           P  P PL  + K   I+   + + F  M       FYS +F+ +Y
Sbjct: 49  PKTPLPLTLLYKLLGIIQFPISAHFSFMSRFLCLPFYSYFFYLSY 93


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = -2

Query: 270 PTRPQPLN*I*KDDNILHHFLESSFGTMISLRTFKFYSKYFHYTY 136
           P  P PL  + K   I+   + + F  M       FYS +F+ +Y
Sbjct: 5   PKTPLPLTLLYKLLGIIQFPISAHFSFMSRFLCLPFYSYFFYLSY 49


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 54  YFFQASRFNNKLSLCSIYVRYSVCVYF 134
           YF  A++F+ KL   SI + Y+V V +
Sbjct: 9   YFTVANKFSGKLWPISIVLIYTVGVVY 35


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +1

Query: 43  DLRIIFFKRAGSIINCLCVRFTLGTVCVYTSISVMK 150
           DL      +  S++   C    +GTV + TSI+  K
Sbjct: 66  DLATSILLKVSSLLIGFCASIYVGTVWINTSINGTK 101


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 284 AVAPGPRDPS 255
           A APGP DPS
Sbjct: 125 AAAPGPSDPS 134


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
 Frame = -2

Query: 237 KDD---NILHHFLESSFGTMISLRT 172
           KDD   N +HH L ++FG    ++T
Sbjct: 207 KDDLLGNNMHHILGNTFGLKPEMKT 231


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,661
Number of Sequences: 336
Number of extensions: 4123
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24720487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)