Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_J17
(962 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069) 36 0.049
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 34 0.15
SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.46
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.47
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.8
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 31 1.8
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 30 2.4
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 30 3.2
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 23 3.5
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.4
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.4
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 29 7.4
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 28 9.8
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 28 9.8
SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41) 28 9.8
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 28 9.8
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 28 9.8
>SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069)
Length = 135
Score = 35.9 bits (79), Expect = 0.049
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -3
Query: 432 PPPGXXPPFXGXWXXPKGXXFFXLGXXVPPXPXFXGGXPP 313
P PG PP G + G + G PP P + GG PP
Sbjct: 32 PAPGGYPPAPGGYPPSGGYGYPPAGGYPPPQPGYAGGPPP 71
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 34.3 bits (75), Expect = 0.15
Identities = 22/61 (36%), Positives = 22/61 (36%)
Frame = -3
Query: 603 GXPPPPXXPRGGXXXRXWXPGGXXXPXXXPXXXGGXFFFLKXYXPPPXPXXKKKXPXPPP 424
G PPPP P GG GG P P G PPP P P PPP
Sbjct: 659 GPPPPPPPPPGGQA------GGAPPPPPPPLPGGAA-------PPPPPPIGGGAPPPPPP 705
Query: 423 G 421
G
Sbjct: 706 G 706
Score = 28.3 bits (60), Expect = 9.8
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = -2
Query: 472 PPPPXXXKKKXSXXPPXXXPPFXGGLVXP 386
PPPP + PP PP GG P
Sbjct: 662 PPPPPPPGGQAGGAPPPPPPPLPGGAAPP 690
>SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 33.5 bits (73), Expect = 0.26
Identities = 32/103 (31%), Positives = 35/103 (33%), Gaps = 6/103 (5%)
Frame = +2
Query: 314 GGXPPXKXGXGGTXXPXKKXXX----PFGXNQX--PXKGGXXPGGGXGXFFFXXGXGGGX 475
GG PP G GG P P G Q P G GGG G G
Sbjct: 501 GGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGGPPPPGAGQGWGQPP 560
Query: 476 XXFKKKKXPPXXXGXXXGXXXPPGXQXRKXXPPRGXXGGGGXP 604
+ PP G G PPG ++ PP G GGG P
Sbjct: 561 PGAGQGGGPPPP-GAGQGGPPPPG-AGQEGPPPPGAGQGGGPP 601
Score = 31.9 bits (69), Expect = 0.80
Identities = 22/64 (34%), Positives = 22/64 (34%)
Frame = +2
Query: 413 GXXPGGGXGXFFFXXGXGGGXXXFKKKKXPPXXXGXXXGXXXPPGXQXRKXXPPRGXXGG 592
G PGGG G G G G PP G PPG PP G G
Sbjct: 481 GKVPGGGQGWGQPPPGAGQGGG-------PPPPGAGQGGGPPPPGAGQGWGQPPPGAGQG 533
Query: 593 GGXP 604
GG P
Sbjct: 534 GGPP 537
Score = 30.7 bits (66), Expect = 1.8
Identities = 30/96 (31%), Positives = 30/96 (31%)
Frame = +2
Query: 317 GXPPXKXGXGGTXXPXKKXXXPFGXNQXPXKGGXXPGGGXGXFFFXXGXGGGXXXFKKKK 496
G PP G GG P G Q G PG G G G G G
Sbjct: 491 GQPPPGAGQGGGPPPP-------GAGQGG--GPPPPGAGQGWGQPPPGAGQGGG------ 535
Query: 497 XPPXXXGXXXGXXXPPGXQXRKXXPPRGXXGGGGXP 604
PP G PPG PP G GGG P
Sbjct: 536 -PPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPP 570
Score = 30.3 bits (65), Expect = 2.4
Identities = 27/89 (30%), Positives = 29/89 (32%)
Frame = +2
Query: 314 GGXPPXKXGXGGTXXPXKKXXXPFGXNQXPXKGGXXPGGGXGXFFFXXGXGGGXXXFKKK 493
GG PP G GG P G Q P G GGG G GG +
Sbjct: 534 GGPPPPGAGQGGGPPPPGAGQ---GWGQPPPGAGQ--GGGPPPP--GAGQGGPPPPGAGQ 586
Query: 494 KXPPXXXGXXXGXXXPPGXQXRKXXPPRG 580
+ PP G PPG PP G
Sbjct: 587 EGPPPPGAGQGGGPPPPGAGQGWGLPPPG 615
Score = 29.9 bits (64), Expect = 3.2
Identities = 28/101 (27%), Positives = 30/101 (29%), Gaps = 4/101 (3%)
Frame = +2
Query: 314 GGXPPXKXGXGGTXXPXKKXXXPFGXNQXPXKGGXXP----GGGXGXFFFXXGXGGGXXX 481
GG PP G G P +GG P G G G G GGG
Sbjct: 512 GGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPP 571
Query: 482 FKKKKXPPXXXGXXXGXXXPPGXQXRKXXPPRGXXGGGGXP 604
+ P G PPG PP G G G P
Sbjct: 572 PGAGQGGPPPPGAGQEGPPPPGAGQGGGPPPPGAGQGWGLP 612
Score = 29.1 bits (62), Expect = 5.6
Identities = 28/97 (28%), Positives = 30/97 (30%)
Frame = -3
Query: 603 GXPPPPXXPRGGXXXRXWXPGGXXXPXXXPXXXGGXFFFLKXYXPPPXPXXKKKXPXPPP 424
G PPPP +GG G P GG PP P + PPP
Sbjct: 501 GGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGG----------PPPPGAGQGGGPPPP 550
Query: 423 GXXPPFXGXWXXPKGXXFFXLGXXVPPXPXFXGGXPP 313
G G P G G PP GG PP
Sbjct: 551 GAG---QGWGQPPPGA---GQGGGPPPPGAGQGGPPP 581
>SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 32.7 bits (71), Expect = 0.46
Identities = 22/70 (31%), Positives = 24/70 (34%)
Frame = -3
Query: 603 GXPPPPXXPRGGXXXRXWXPGGXXXPXXXPXXXGGXFFFLKXYXPPPXPXXKKKXPXPPP 424
G PPPP GG PG P + Y PPP P + P PPP
Sbjct: 384 GGPPPPWSKPGGILPGPPPPG---PPMLNMAPSIPPWQTTPGYIPPPPPGFPQFQPPPPP 440
Query: 423 GXXPPFXGXW 394
PP W
Sbjct: 441 ---PPSDAPW 447
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 471 PPPXPXXKKKXPXPPPGXXPP 409
PPP P K P PPP PP
Sbjct: 365 PPPPPPTNKPPPPPPPTNGPP 385
Score = 28.7 bits (61), Expect(2) = 0.47
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -3
Query: 471 PPPXPXXKKKXPXPPPGXXPPFXG 400
PPP P P PPP PP G
Sbjct: 395 PPPPPPTNGPPPPPPPTNGPPSEG 418
Score = 22.6 bits (46), Expect(2) = 0.47
Identities = 10/27 (37%), Positives = 10/27 (37%)
Frame = -3
Query: 651 PPXXXGGPVXXXFVFXGXPPPPXXPRG 571
PP GP G PPPP G
Sbjct: 377 PPPPTNGPPPPPPPTNGPPPPPPPTNG 403
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 30.7 bits (66), Expect = 1.8
Identities = 26/78 (33%), Positives = 26/78 (33%)
Frame = -3
Query: 546 PGGXXXPXXXPXXXGGXFFFLKXYXPPPXPXXKKKXPXPPPGXXPPFXGXWXXPKGXXFF 367
PGG P P GG PPP P P PPPG P P G
Sbjct: 904 PGGSESPSASPP--GG-----SVPPPPPPPGGNAPLPPPPPGGSAP---SQPPPPG---- 949
Query: 366 XLGXXVPPXPXFXGGXPP 313
G PP P G PP
Sbjct: 950 --GNAPPPPPPPGGSAPP 965
Score = 30.7 bits (66), Expect = 1.8
Identities = 27/97 (27%), Positives = 27/97 (27%)
Frame = -3
Query: 603 GXPPPPXXPRGGXXXRXWXPGGXXXPXXXPXXXGGXFFFLKXYXPPPXPXXKKKXPXPPP 424
G P P GG P G P P G PP P P PPP
Sbjct: 906 GSESPSASPPGGSVPPPPPPPGGNAPLPPPPPGGSA------PSQPPPPGGNAPPPPPPP 959
Query: 423 GXXPPFXGXWXXPKGXXFFXLGXXVPPXPXFXGGXPP 313
G P G P G PP P PP
Sbjct: 960 GGSAPPPGGGAPPLPP---PPGGSAPPPPPPPPPPPP 993
Score = 28.7 bits (61), Expect = 7.4
Identities = 22/68 (32%), Positives = 23/68 (33%), Gaps = 5/68 (7%)
Frame = -3
Query: 597 PPPPXXPRGGXXXRXWXPGGXXXPXXXPXXX-----GGXFFFLKXYXPPPXPXXKKKXPX 433
P PP P G + PGG P P GG L PPP P
Sbjct: 931 PLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPL----PPPPGGSAPPPPP 986
Query: 432 PPPGXXPP 409
PPP PP
Sbjct: 987 PPPPPPPP 994
Score = 28.3 bits (60), Expect = 9.8
Identities = 21/74 (28%), Positives = 22/74 (29%)
Frame = -2
Query: 607 PGXPPPPXXPPWGXXFXXLXPXXXRXPXXRSPXXGGXFFFFKXXXPPPPXXXKKKXSXXP 428
PG PP PP G P + P GG PPPP
Sbjct: 915 PGGSVPPPPPPPGGNAPLPPPPPGGSAPSQPPPPGGN----APPPPPPPGGSAPPPGGGA 970
Query: 427 PXXXPPFXGGLVXP 386
P PP GG P
Sbjct: 971 PPLPPP-PGGSAPP 983
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 30.7 bits (66), Expect = 1.8
Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
Frame = -3
Query: 471 PPPXPXXKKKXPXPPP--GXXPPFXGXWXXPKGXXFFXLGXXVPPXPXFXGGXPP 313
PPP P + P PP PP G P G PP P GG PP
Sbjct: 327 PPPPPSRSSQRPPPPSRGAPPPPSMGMAPPPVGG-----AAPPPPPPPPVGGPPP 376
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 30.3 bits (65), Expect = 2.4
Identities = 23/76 (30%), Positives = 23/76 (30%), Gaps = 4/76 (5%)
Frame = -3
Query: 528 PXXXPXXXGGXFFFLKXYXPPPXPXXKKKXPXPPPGXXPP--FXGXWXXPKGXXFFXLGX 355
P P G PPP P P PPP PP G P G
Sbjct: 680 PPPLPVIEGSSLSVPPPPPPPPPPLLSGTLPMPPPPPPPPPGCAGLPPPPPSPQPGCAGL 739
Query: 354 XVPPXPXFXG--GXPP 313
PP P G G PP
Sbjct: 740 PPPPPPPPPGCAGLPP 755
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/52 (34%), Positives = 20/52 (38%)
Frame = -3
Query: 468 PPXPXXKKKXPXPPPGXXPPFXGXWXXPKGXXFFXLGXXVPPXPXFXGGXPP 313
PP P + P PP G PP G P G PP P + G PP
Sbjct: 459 PPPPGGMRGMPPPPMGMYPPPRGFPPPPFG----------PPPPFYRGPPPP 500
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 29.9 bits (64), Expect = 3.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 471 PPPXPXXKKKXPXPPPGXXPPF 406
PPP P P PPP PPF
Sbjct: 467 PPPPPPPPPPPPPPPPPPPPPF 488
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 23.0 bits (47), Expect(3) = 3.5
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -2
Query: 472 PPPPXXXKKKXSXXPPXXXPPF 407
PPPP PP PPF
Sbjct: 197 PPPPPPPPGFPGGAPPPPPPPF 218
Score = 22.2 bits (45), Expect(3) = 3.5
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -2
Query: 604 GXPPPPXXPP 575
G PPPP PP
Sbjct: 193 GMPPPPPPPP 202
Score = 21.0 bits (42), Expect(3) = 3.5
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -2
Query: 598 PPPPXXPPWG 569
PPPP PP G
Sbjct: 196 PPPPPPPPPG 205
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 28.7 bits (61), Expect = 7.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -3
Query: 471 PPPXPXXKKKXPXPPPGXXPP 409
PPP P + P PPP PP
Sbjct: 695 PPPPPPPQPSTPPPPPPSTPP 715
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 28.7 bits (61), Expect = 7.4
Identities = 31/121 (25%), Positives = 36/121 (29%)
Frame = -3
Query: 675 PPXXPFFFPPXXXGGPVXXXFVFXGXPPPPXXPRGGXXXRXWXPGGXXXPXXXPXXXGGX 496
PP P+ PP P PPPP P + P P P
Sbjct: 103 PPPPPYPPPPNPPYPPPPNA----PYPPPPNPPYPPPPNAPYPPS-PNAPYPPPPNPP-- 155
Query: 495 FFFLKXYXPPPXPXXKKKXPXPPPGXXPPFXGXWXXPKGXXFFXLGXXVPPXPXFXGGXP 316
+ Y PPP P P PPP PP + P + PP P P
Sbjct: 156 -YPPPLYPPPPNP-PPPNAPYPPPPYPPPPNPPYPPPPNPPY-------PPPPNAPNPPP 206
Query: 315 P 313
P
Sbjct: 207 P 207
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 28.7 bits (61), Expect = 7.4
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 471 PPPXPXXKKKXPXPPPGXXPP 409
PPP P P PPP PP
Sbjct: 207 PPPRPPPSPPPPPPPPSPSPP 227
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 28.3 bits (60), Expect = 9.8
Identities = 29/97 (29%), Positives = 30/97 (30%), Gaps = 4/97 (4%)
Frame = -3
Query: 687 GAXXPPXXPFFFPPXXXGGPVXXXFVFXGXPPPPXXPRGGXXXRXWXPGGXXXPXXXPXX 508
G P P F P GP G P PP P G P G P P
Sbjct: 43 GPPGPDGPPGFPGPQGPNGPKGPP----GLPGPPGPP--GFQGPPGNPAGAIGPPGLPGP 96
Query: 507 XG--GXFFFLKXYXPP--PXPXXKKKXPXPPPGXXPP 409
G G L PP P P + P PP PP
Sbjct: 97 NGVNGPPGELGDMGPPGPPGPPGPQMPPGPPGLPGPP 133
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 28.3 bits (60), Expect = 9.8
Identities = 19/68 (27%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
Frame = -2
Query: 607 PGXPPPPXXPPWGXXFXXLXPXXXRXPXXRSP--XXGGXFFFFKXXXPPPPXXXKKKXSX 434
PG PPP PP G + P P GG + PPPP
Sbjct: 250 PGMPPPGMMPPPGFPPMGMPGMGGMPPPGMPPPMPPGGMPPNMEQPPPPPPSSGVSNSGM 309
Query: 433 XPPXXXPP 410
PP P
Sbjct: 310 MPPHMQNP 317
>SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41)
Length = 638
Score = 28.3 bits (60), Expect = 9.8
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 471 PPPXPXXKKKXPXPPPGXXPP 409
PPP P ++K P PP PP
Sbjct: 456 PPPLPPDEEKPPPPPAPALPP 476
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 28.3 bits (60), Expect = 9.8
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 471 PPPXPXXKKKXPXPPPGXXPP 409
PPP P P PPP PP
Sbjct: 1162 PPPPPPPSSPSPPPPPPPPPP 1182
Score = 28.3 bits (60), Expect = 9.8
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 471 PPPXPXXKKKXPXPPPGXXPP 409
PPP P P PPP PP
Sbjct: 1163 PPPPPPSSPSPPPPPPPPPPP 1183
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 28.3 bits (60), Expect = 9.8
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -3
Query: 471 PPPXPXXKKKXPXPPPGXXPPFXGXWXXP 385
PPP P P PPP PP G P
Sbjct: 305 PPPPPPGGAPPPPPPPPPPPPGDGGAPPP 333
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 28.3 bits (60), Expect = 9.8
Identities = 18/63 (28%), Positives = 18/63 (28%)
Frame = -3
Query: 597 PPPPXXPRGGXXXRXWXPGGXXXPXXXPXXXGGXFFFLKXYXPPPXPXXKKKXPXPPPGX 418
PPPP P P P P PPP P P PPP
Sbjct: 369 PPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
Query: 417 XPP 409
PP
Sbjct: 429 PPP 431
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,783,483
Number of Sequences: 59808
Number of extensions: 196069
Number of successful extensions: 1255
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2836293838
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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