BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fdpeP01_F_J17 (962 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.17 U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.17 AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.17 Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.30 U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.30 AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.40 AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.40 AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.40 Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 32 0.53 AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 31 0.92 AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 31 0.92 U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 31 1.2 AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 31 1.6 Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 2.8 Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 29 4.9 Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 29 4.9 AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 4.9 AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 29 6.5 U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 8.6 >U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect protein 1, isoformb protein. Length = 1437 Score = 33.9 bits (74), Expect = 0.17 Identities = 29/96 (30%), Positives = 29/96 (30%), Gaps = 1/96 (1%) Frame = -3 Query: 651 PPXXXGGPVXXXFV-FXGXPPPPXXPRGGXXXRXWXPGGXXXPXXXPXXXGGXFFFLKXY 475 PP G P G PPPP P GG P P P GG Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPP-GGLPPITGGPPPPPPPGGLPPISGGP------- 758 Query: 474 XPPPXPXXKKKXPXPPPGXXPPFXGXWXXPKGXXFF 367 PPP P P PPP F G P F Sbjct: 759 -PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793 Score = 33.5 bits (73), Expect = 0.23 Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 3/56 (5%) Frame = -3 Query: 471 PPPX--PXXKKKXPXPPPGXXPPFXGXWXXPKGXXFFX-LGXXVPPXPXFXGGXPP 313 PPP P P PPPG PP G P + PP P GG PP Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770 >U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect protein 1, isoforma protein. Length = 1435 Score = 33.9 bits (74), Expect = 0.17 Identities = 29/96 (30%), Positives = 29/96 (30%), Gaps = 1/96 (1%) Frame = -3 Query: 651 PPXXXGGPVXXXFV-FXGXPPPPXXPRGGXXXRXWXPGGXXXPXXXPXXXGGXFFFLKXY 475 PP G P G PPPP P GG P P P GG Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPP-GGLPPITGGPPPPPPPGGLPPISGGP------- 758 Query: 474 XPPPXPXXKKKXPXPPPGXXPPFXGXWXXPKGXXFF 367 PPP P P PPP F G P F Sbjct: 759 -PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793 Score = 33.5 bits (73), Expect = 0.23 Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 3/56 (5%) Frame = -3 Query: 471 PPPX--PXXKKKXPXPPPGXXPPFXGXWXXPKGXXFFX-LGXXVPPXPXFXGGXPP 313 PPP P P PPPG PP G P + PP P GG PP Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770 >AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. Length = 1018 Score = 33.9 bits (74), Expect = 0.17 Identities = 29/96 (30%), Positives = 29/96 (30%), Gaps = 1/96 (1%) Frame = -3 Query: 651 PPXXXGGPVXXXFV-FXGXPPPPXXPRGGXXXRXWXPGGXXXPXXXPXXXGGXFFFLKXY 475 PP G P G PPPP P GG P P P GG Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPP-GGLPPITGGPPPPPPPGGLPPISGGP------- 341 Query: 474 XPPPXPXXKKKXPXPPPGXXPPFXGXWXXPKGXXFF 367 PPP P P PPP F G P F Sbjct: 342 -PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 376 Score = 33.5 bits (73), Expect = 0.23 Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 3/56 (5%) Frame = -3 Query: 471 PPPX--PXXKKKXPXPPPGXXPPFXGXWXXPKGXXFFX-LGXXVPPXPXFXGGXPP 313 PPP P P PPPG PP G P + PP P GG PP Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 353 >Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein C08B11.5 protein. Length = 388 Score = 33.1 bits (72), Expect = 0.30 Identities = 27/97 (27%), Positives = 31/97 (31%), Gaps = 2/97 (2%) Frame = -3 Query: 597 PPPPXXPRGGXXXRXWXPGGXXXPXXXPXXXGGXFFFLKXYXPPPXPXXKKKXPXPP--P 424 P PP P P P P G + PPP P + P PP P Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMW-------PPPPPPPPGRTPGPPGMP 314 Query: 423 GXXPPFXGXWXXPKGXXFFXLGXXVPPXPXFXGGXPP 313 G PP P G + PP + GG PP Sbjct: 315 GMPPPPPPSRFGPPGMG--GMPPPPPPGMRYPGGMPP 349 >U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding protein protein. Length = 398 Score = 33.1 bits (72), Expect = 0.30 Identities = 27/97 (27%), Positives = 31/97 (31%), Gaps = 2/97 (2%) Frame = -3 Query: 597 PPPPXXPRGGXXXRXWXPGGXXXPXXXPXXXGGXFFFLKXYXPPPXPXXKKKXPXPP--P 424 P PP P P P P G + PPP P + P PP P Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMW-------PPPPPPPPGRTPGPPGMP 324 Query: 423 GXXPPFXGXWXXPKGXXFFXLGXXVPPXPXFXGGXPP 313 G PP P G + PP + GG PP Sbjct: 325 GMPPPPPPSRFGPPGMG--GMPPPPPPGMRYPGGMPP 359 >AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(q/n-rich)-domain-bearingprotein protein 75, isoform b protein. Length = 518 Score = 32.7 bits (71), Expect = 0.40 Identities = 30/94 (31%), Positives = 33/94 (35%), Gaps = 1/94 (1%) Frame = -3 Query: 687 GAXXPPXXPFFFPPXXXGGPVXXXFVFXGXPPPPXXPRGGXXXRXWXPGGXXXPXXXPXX 508 G+ PP PP G P G PPPP PRG P G P Sbjct: 270 GSPPPPPTGSPPPPPAGGSPPPPR---AGSPPPPPPPRGSP------PTGSLPPPQA--- 317 Query: 507 XGGXFFFLKXYXPPPXPXXKKKXP-XPPPGXXPP 409 GG PPP P K++ P PP PP Sbjct: 318 -GGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 350 Score = 30.7 bits (66), Expect = 1.6 Identities = 28/105 (26%), Positives = 28/105 (26%) Frame = -3 Query: 651 PPXXXGGPVXXXFVFXGXPPPPXXPRGGXXXRXWXPGGXXXPXXXPXXXGGXFFFLKXYX 472 PP G P G PPPP R P P GG Sbjct: 240 PPPPKGSP---PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS-------- 288 Query: 471 PPPXPXXKKKXPXPPPGXXPPFXGXWXXPKGXXFFXLGXXVPPXP 337 PP P P PPP PP G G PP P Sbjct: 289 -PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 332 >AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(q/n-rich)-domain-bearingprotein protein 75, isoform c protein. Length = 539 Score = 32.7 bits (71), Expect = 0.40 Identities = 30/94 (31%), Positives = 33/94 (35%), Gaps = 1/94 (1%) Frame = -3 Query: 687 GAXXPPXXPFFFPPXXXGGPVXXXFVFXGXPPPPXXPRGGXXXRXWXPGGXXXPXXXPXX 508 G+ PP PP G P G PPPP PRG P G P Sbjct: 291 GSPPPPPTGSPPPPPAGGSPPPPR---AGSPPPPPPPRGSP------PTGSLPPPQA--- 338 Query: 507 XGGXFFFLKXYXPPPXPXXKKKXP-XPPPGXXPP 409 GG PPP P K++ P PP PP Sbjct: 339 -GGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 371 Score = 30.7 bits (66), Expect = 1.6 Identities = 28/105 (26%), Positives = 28/105 (26%) Frame = -3 Query: 651 PPXXXGGPVXXXFVFXGXPPPPXXPRGGXXXRXWXPGGXXXPXXXPXXXGGXFFFLKXYX 472 PP G P G PPPP R P P GG Sbjct: 261 PPPPKGSP---PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS-------- 309 Query: 471 PPPXPXXKKKXPXPPPGXXPPFXGXWXXPKGXXFFXLGXXVPPXP 337 PP P P PPP PP G G PP P Sbjct: 310 -PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 353 >AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q/n-rich)-domain-bearingprotein protein 75, isoform a protein. Length = 524 Score = 32.7 bits (71), Expect = 0.40 Identities = 30/94 (31%), Positives = 33/94 (35%), Gaps = 1/94 (1%) Frame = -3 Query: 687 GAXXPPXXPFFFPPXXXGGPVXXXFVFXGXPPPPXXPRGGXXXRXWXPGGXXXPXXXPXX 508 G+ PP PP G P G PPPP PRG P G P Sbjct: 276 GSPPPPPTGSPPPPPAGGSPPPPR---AGSPPPPPPPRGSP------PTGSLPPPQA--- 323 Query: 507 XGGXFFFLKXYXPPPXPXXKKKXP-XPPPGXXPP 409 GG PPP P K++ P PP PP Sbjct: 324 -GGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 356 Score = 30.7 bits (66), Expect = 1.6 Identities = 28/105 (26%), Positives = 28/105 (26%) Frame = -3 Query: 651 PPXXXGGPVXXXFVFXGXPPPPXXPRGGXXXRXWXPGGXXXPXXXPXXXGGXFFFLKXYX 472 PP G P G PPPP R P P GG Sbjct: 246 PPPPKGSP---PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS-------- 294 Query: 471 PPPXPXXKKKXPXPPPGXXPPFXGXWXXPKGXXFFXLGXXVPPXP 337 PP P P PPP PP G G PP P Sbjct: 295 -PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 338 >Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical protein C18D11.4 protein. Length = 309 Score = 32.3 bits (70), Expect = 0.53 Identities = 23/95 (24%), Positives = 29/95 (30%) Frame = +2 Query: 314 GGXPPXKXGXGGTXXPXKKXXXPFGXNQXPXKGGXXPGGGXGXFFFXXGXGGGXXXFKKK 493 GG G GG + G P + G GG G + G GGG + Sbjct: 209 GGGGDRYGGGGGDRYGGDRYGGGGGRRGSPDRRGGFRSGGGGGGYMRSGGGGGGPDRRDH 268 Query: 494 KXPPXXXGXXXGXXXPPGXQXRKXXPPRGXXGGGG 598 + G P + R G GGGG Sbjct: 269 RDNDRNGGGGGHRPYDPSFRRRVESYGSGNSGGGG 303 >AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical protein R148.5b protein. Length = 505 Score = 31.5 bits (68), Expect = 0.92 Identities = 27/91 (29%), Positives = 31/91 (34%), Gaps = 3/91 (3%) Frame = -3 Query: 684 AXXPPXXPFFFPPXXXG-GPVXXXFVFXGXPPP--PXXPRGGXXXRXWXPGGXXXPXXXP 514 A PP FF PP P F+ G PPP P P G P G P Sbjct: 287 AMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMG----PPRGFMPPPHPM 342 Query: 513 XXXGGXFFFLKXYXPPPXPXXKKKXPXPPPG 421 GG + + PPP P + P G Sbjct: 343 MFRGGPY---PPFFPPPPPHFMRPSSPPTDG 370 >AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical protein R148.5a protein. Length = 528 Score = 31.5 bits (68), Expect = 0.92 Identities = 27/91 (29%), Positives = 31/91 (34%), Gaps = 3/91 (3%) Frame = -3 Query: 684 AXXPPXXPFFFPPXXXG-GPVXXXFVFXGXPPP--PXXPRGGXXXRXWXPGGXXXPXXXP 514 A PP FF PP P F+ G PPP P P G P G P Sbjct: 287 AMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMG----PPRGFMPPPHPM 342 Query: 513 XXXGGXFFFLKXYXPPPXPXXKKKXPXPPPG 421 GG + + PPP P + P G Sbjct: 343 MFRGGPY---PPFFPPPPPHFMRPSSPPTDG 370 >U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter than wild-typeprotein 3 protein. Length = 302 Score = 31.1 bits (67), Expect = 1.2 Identities = 29/97 (29%), Positives = 31/97 (31%) Frame = -3 Query: 603 GXPPPPXXPRGGXXXRXWXPGGXXXPXXXPXXXGGXFFFLKXYXPPPXPXXKKKXPXPPP 424 G P PP P G R PG P P G PPP P +K P PP Sbjct: 111 GPPGPPGPP--GRDGRPGAPGRPGNPGP-PGRDGALL-----PGPPPKPPCQKCPPGPPG 162 Query: 423 GXXPPFXGXWXXPKGXXFFXLGXXVPPXPXFXGGXPP 313 PP P+G VP P G P Sbjct: 163 PAGPPGPKGLPGPQGDAGTSGQDGVPGLPGPPGPSGP 199 >AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical protein Y48B6A.3 protein. Length = 892 Score = 30.7 bits (66), Expect = 1.6 Identities = 22/71 (30%), Positives = 27/71 (38%), Gaps = 3/71 (4%) Frame = +2 Query: 392 NQXPXKGGXXPGGGXGXFF---FXXGXGGGXXXFKKKKXPPXXXGXXXGXXXPPGXQXRK 562 +Q + G GGG G + G GGG + + G G PPG Q Sbjct: 817 DQQQQRQGGYQGGGYGGGYGGGGGGGGGGGGGSYHQPYNQDQRRGGRGGGGGPPGYQ--- 873 Query: 563 XXPPRGXXGGG 595 P RG GGG Sbjct: 874 RPPYRGGGGGG 884 >Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein T24B8.4 protein. Length = 866 Score = 29.9 bits (64), Expect = 2.8 Identities = 27/83 (32%), Positives = 28/83 (33%) Frame = -3 Query: 672 PXXPFFFPPXXXGGPVXXXFVFXGXPPPPXXPRGGXXXRXWXPGGXXXPXXXPXXXGGXF 493 P FF PP PV F+ PPP P G GG P P GG Sbjct: 59 PKPSFFIPP-----PVPNGFI-----PPPPGPGGIPPPPPMFAGGIPPP---PPMMGGI- 104 Query: 492 FFLKXYXPPPXPXXKKKXPXPPP 424 PPP P P PPP Sbjct: 105 -------PPPPPMFGAPPPPPPP 120 Score = 28.7 bits (61), Expect = 6.5 Identities = 19/58 (32%), Positives = 21/58 (36%), Gaps = 3/58 (5%) Frame = -3 Query: 477 YXPPPXPXXKKKXPXPPPGXXPP---FXGXWXXPKGXXFFXLGXXVPPXPXFXGGXPP 313 + PPP P P P G PP F G P +G PP P F PP Sbjct: 64 FIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPP----MMGGIPPPPPMFGAPPPP 117 >Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical protein B0035.1b protein. Length = 341 Score = 29.1 bits (62), Expect = 4.9 Identities = 25/93 (26%), Positives = 27/93 (29%), Gaps = 2/93 (2%) Frame = -3 Query: 651 PPXXXGGPVXXXFVFXGXPPPPXXPRGGXXXRXW--XPGGXXXPXXXPXXXGGXFFFLKX 478 PP P F F G PP P P P G P P G + + Sbjct: 109 PPMPTPMPFPQHFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMP----GAYPPPRG 164 Query: 477 YXPPPXPXXKKKXPXPPPGXXPPFXGXWXXPKG 379 Y P P P P P PP P G Sbjct: 165 YPPAPAPGVYMPPPGMPGAYPPPRMPIGHGPPG 197 >Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical protein B0035.1a protein. Length = 298 Score = 29.1 bits (62), Expect = 4.9 Identities = 25/93 (26%), Positives = 27/93 (29%), Gaps = 2/93 (2%) Frame = -3 Query: 651 PPXXXGGPVXXXFVFXGXPPPPXXPRGGXXXRXW--XPGGXXXPXXXPXXXGGXFFFLKX 478 PP P F F G PP P P P G P P G + + Sbjct: 109 PPMPTPMPFPQHFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMP----GAYPPPRG 164 Query: 477 YXPPPXPXXKKKXPXPPPGXXPPFXGXWXXPKG 379 Y P P P P P PP P G Sbjct: 165 YPPAPAPGVYMPPPGMPGAYPPPRMPIGHGPPG 197 >AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical protein D1007.7 protein. Length = 988 Score = 29.1 bits (62), Expect = 4.9 Identities = 21/73 (28%), Positives = 23/73 (31%) Frame = -2 Query: 598 PPPPXXPPWGXXFXXLXPXXXRXPXXRSPXXGGXFFFFKXXXPPPPXXXKKKXSXXPPXX 419 PP P PP G F P G F PPPP + PP Sbjct: 666 PPVPHPPPMGFPFQHQLTQLPGQPRPAGLPPGVPPMF-NLNAPPPPGIPGYPPAPPPPGV 724 Query: 418 XPPFXGGLVXPKG 380 PP G + P G Sbjct: 725 GPPPPQG-IPPMG 736 >AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical protein Y59A8B.1a protein. Length = 1641 Score = 28.7 bits (61), Expect = 6.5 Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 4/52 (7%) Frame = -2 Query: 604 GXPPPPXXPPWGXXFXXLXPXXXRXPXXR----SPXXGGXFFFFKXXXPPPP 461 G PPPP PP + P R P R S G F PPP Sbjct: 229 GIPPPPILPPVACLSSTMSPGMLRSPVPRERFNSVESNGSFSLHPPPPVPPP 280 >U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical protein C01G8.9a protein. Length = 1724 Score = 28.3 bits (60), Expect = 8.6 Identities = 16/55 (29%), Positives = 19/55 (34%), Gaps = 3/55 (5%) Frame = -3 Query: 471 PPPXPXXK---KKXPXPPPGXXPPFXGXWXXPKGXXFFXLGXXVPPXPXFXGGXP 316 PPP P P PPG P F G ++ +PP P G P Sbjct: 446 PPPGPPGAYPGNGAPGGPPGGPPQFPGHPGMDPNYHYYQQHGMMPPHPGHPGYPP 500 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 9,919,430 Number of Sequences: 27780 Number of extensions: 199462 Number of successful extensions: 1138 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 444 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 840 length of database: 12,740,198 effective HSP length: 82 effective length of database: 10,462,238 effective search space used: 2490012644 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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