Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_J15
         (921 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2F5N9 Cluster: Nucleoplasmin isoform 2; n=7; Endoptery...   129   1e-28
UniRef50_UPI00015B5EC5 Cluster: PREDICTED: similar to nucleoplas...    69   1e-10
UniRef50_A2I421 Cluster: Nucleoplasmin isoform 1-like protein; n...    65   3e-09
UniRef50_Q9VAC4 Cluster: CG7911-PA; n=2; Sophophora|Rep: CG7911-...    60   8e-08
UniRef50_Q27415 Cluster: Nucleoplasmin-like protein; n=4; Sophop...    60   1e-07
UniRef50_A2QQS7 Cluster: Contig An08c0100, complete genome; n=1;...    34   5.9  

>UniRef50_Q2F5N9 Cluster: Nucleoplasmin isoform 2; n=7;
           Endopterygota|Rep: Nucleoplasmin isoform 2 - Bombyx mori
           (Silk moth)
          Length = 187

 Score =  129 bits (311), Expect = 1e-28
 Identities = 65/74 (87%), Positives = 65/74 (87%)
 Frame = +3

Query: 198 AXYPRSNKLVXRQALLXPXAKPDELXVIQVEAMSLQEAVKLPXAVLKVGESRHVRLDXEF 377
           A YPRSNKLV RQALL P AKPDEL VIQVEAMSLQEAVKLP AVLKVGESRHVRLD EF
Sbjct: 26  AEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSLQEAVKLPVAVLKVGESRHVRLDIEF 85

Query: 378 PDAPVTXTLVQGFG 419
           PDAPVT TLVQG G
Sbjct: 86  PDAPVTFTLVQGSG 99



 Score = 62.1 bits (144), Expect = 2e-08
 Identities = 28/32 (87%), Positives = 29/32 (90%)
 Frame = +2

Query: 536 KDEDNEEGEPKGXKAKMSNNAKGXAASPXKNA 631
           +DEDNEEGEPKG KAKMSNNAKG AASP KNA
Sbjct: 154 EDEDNEEGEPKGKKAKMSNNAKGKAASPKKNA 185



 Score = 44.8 bits (101), Expect = 0.003
 Identities = 21/30 (70%), Positives = 23/30 (76%)
 Frame = +2

Query: 119 MTDEFVYCVSPCSSSHQSETWDPEANSXIP 208
           MTDEF Y V+  SSSHQSETWDPEA +  P
Sbjct: 1   MTDEFFYGVT-LSSSHQSETWDPEAKAEYP 29


>UniRef50_UPI00015B5EC5 Cluster: PREDICTED: similar to
           nucleoplasmin-like protein; n=1; Nasonia
           vitripennis|Rep: PREDICTED: similar to
           nucleoplasmin-like protein - Nasonia vitripennis
          Length = 141

 Score = 69.3 bits (162), Expect = 1e-10
 Identities = 32/61 (52%), Positives = 44/61 (72%)
 Frame = +3

Query: 237 ALLXPXAKPDELXVIQVEAMSLQEAVKLPXAVLKVGESRHVRLDXEFPDAPVTXTLVQGF 416
           ALL P AK  EL V+QVEAM L+  +K+P A+L++G++  + LD  FPD PVT TL++G 
Sbjct: 2   ALLGPEAKAGELNVLQVEAMGLKGPIKIPIALLEMGKTSQIILDLSFPDPPVTFTLIKGS 61

Query: 417 G 419
           G
Sbjct: 62  G 62


>UniRef50_A2I421 Cluster: Nucleoplasmin isoform 1-like protein; n=1;
           Maconellicoccus hirsutus|Rep: Nucleoplasmin isoform
           1-like protein - Maconellicoccus hirsutus (hibiscus
           mealybug)
          Length = 176

 Score = 64.9 bits (151), Expect = 3e-09
 Identities = 33/75 (44%), Positives = 43/75 (57%)
 Frame = +3

Query: 195 TAXYPRSNKLVXRQALLXPXAKPDELXVIQVEAMSLQEAVKLPXAVLKVGESRHVRLDXE 374
           T  Y   + L+ +QA+L P AK  E+ V++VEAM  +  VK P  VLK G      LD  
Sbjct: 32  TQGYRGEHTLLVKQAVLGPEAKDGEINVVEVEAMGYKSDVKYPITVLKGGSQHQSLLDLL 91

Query: 375 FPDAPVTXTLVQGFG 419
           FPD PVT  L++G G
Sbjct: 92  FPDPPVTFKLIKGSG 106


>UniRef50_Q9VAC4 Cluster: CG7911-PA; n=2; Sophophora|Rep: CG7911-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 156

 Score = 60.1 bits (139), Expect = 8e-08
 Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
 Frame = +3

Query: 213 SNKLVXRQALLXPXAKPDELXVIQVEAM----SLQEAVKLPXAVLKVGESRHVRLDXEFP 380
           S+KL+ +Q  L P AK  E  V+Q E        ++ +K+P AVLKVGE+R +R + EFP
Sbjct: 33  SHKLIIKQISLGPEAKTGEFNVVQAETNINDDGEKKTLKIPIAVLKVGETRSLRPNVEFP 92

Query: 381 DAPVTXTLVQGFG 419
           +  VT  LVQG G
Sbjct: 93  NGSVTFKLVQGSG 105


>UniRef50_Q27415 Cluster: Nucleoplasmin-like protein; n=4;
           Sophophora|Rep: Nucleoplasmin-like protein - Drosophila
           melanogaster (Fruit fly)
          Length = 152

 Score = 59.7 bits (138), Expect = 1e-07
 Identities = 32/75 (42%), Positives = 46/75 (61%)
 Frame = +3

Query: 204 YPRSNKLVXRQALLXPXAKPDELXVIQVEAMSLQEAVKLPXAVLKVGESRHVRLDXEFPD 383
           Y R  KLV +Q LL   AK +E  V++V     +++V++P AVLK GE+R V  D EF +
Sbjct: 26  YARGQKLVIKQILLGAEAKENEFNVVEVNTP--KDSVQIPIAVLKAGETRAVNPDVEFYE 83

Query: 384 APVTXTLVQGFGVQY 428
           + VT  L++G G  Y
Sbjct: 84  SKVTFKLIKGSGPVY 98


>UniRef50_A2QQS7 Cluster: Contig An08c0100, complete genome; n=1;
           Aspergillus niger|Rep: Contig An08c0100, complete genome
           - Aspergillus niger
          Length = 548

 Score = 33.9 bits (74), Expect = 5.9
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 131 FVYCVSPCSSSHQSETWDPEANSXIPTQQQARHXS 235
           +VYC+  C S + + T D   +S + T QQ +H S
Sbjct: 458 YVYCIEECESVYTNHTSDKNIDSAMNTDQQEKHHS 492


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,720,030
Number of Sequences: 1657284
Number of extensions: 9425407
Number of successful extensions: 18062
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18046
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 84441173866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)