Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_J15
         (921 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4505|AAF56987.1|  156|Drosophila melanogaster CG7911-PA...    60   4e-09
X99293-1|CAA67679.1|  152|Drosophila melanogaster CRP1 protein p...    60   6e-09
U59498-1|AAC47295.1|  152|Drosophila melanogaster nucleoplasmin-...    60   6e-09
AY119592-1|AAM50246.1|  152|Drosophila melanogaster LD16456p pro...    60   6e-09
AE014297-4506|AAF56988.1|  152|Drosophila melanogaster CG7917-PA...    60   6e-09
U59497-1|AAC47294.1|  121|Drosophila melanogaster nucleoplasmin-...    52   8e-07

>AE014297-4505|AAF56987.1|  156|Drosophila melanogaster CG7911-PA
           protein.
          Length = 156

 Score = 60.1 bits (139), Expect = 4e-09
 Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
 Frame = +3

Query: 213 SNKLVXRQALLXPXAKPDELXVIQVEAM----SLQEAVKLPXAVLKVGESRHVRLDXEFP 380
           S+KL+ +Q  L P AK  E  V+Q E        ++ +K+P AVLKVGE+R +R + EFP
Sbjct: 33  SHKLIIKQISLGPEAKTGEFNVVQAETNINDDGEKKTLKIPIAVLKVGETRSLRPNVEFP 92

Query: 381 DAPVTXTLVQGFG 419
           +  VT  LVQG G
Sbjct: 93  NGSVTFKLVQGSG 105


>X99293-1|CAA67679.1|  152|Drosophila melanogaster CRP1 protein
           protein.
          Length = 152

 Score = 59.7 bits (138), Expect = 6e-09
 Identities = 32/75 (42%), Positives = 46/75 (61%)
 Frame = +3

Query: 204 YPRSNKLVXRQALLXPXAKPDELXVIQVEAMSLQEAVKLPXAVLKVGESRHVRLDXEFPD 383
           Y R  KLV +Q LL   AK +E  V++V     +++V++P AVLK GE+R V  D EF +
Sbjct: 26  YARGQKLVIKQILLGAEAKENEFNVVEVNTP--KDSVQIPIAVLKAGETRAVNPDVEFYE 83

Query: 384 APVTXTLVQGFGVQY 428
           + VT  L++G G  Y
Sbjct: 84  SKVTFKLIKGSGPVY 98


>U59498-1|AAC47295.1|  152|Drosophila melanogaster
           nucleoplasmin-like protein protein.
          Length = 152

 Score = 59.7 bits (138), Expect = 6e-09
 Identities = 32/75 (42%), Positives = 46/75 (61%)
 Frame = +3

Query: 204 YPRSNKLVXRQALLXPXAKPDELXVIQVEAMSLQEAVKLPXAVLKVGESRHVRLDXEFPD 383
           Y R  KLV +Q LL   AK +E  V++V     +++V++P AVLK GE+R V  D EF +
Sbjct: 26  YARGQKLVIKQILLGAEAKENEFNVVEVNTP--KDSVQIPIAVLKAGETRAVNPDVEFYE 83

Query: 384 APVTXTLVQGFGVQY 428
           + VT  L++G G  Y
Sbjct: 84  SKVTFKLIKGSGPVY 98


>AY119592-1|AAM50246.1|  152|Drosophila melanogaster LD16456p
           protein.
          Length = 152

 Score = 59.7 bits (138), Expect = 6e-09
 Identities = 32/75 (42%), Positives = 46/75 (61%)
 Frame = +3

Query: 204 YPRSNKLVXRQALLXPXAKPDELXVIQVEAMSLQEAVKLPXAVLKVGESRHVRLDXEFPD 383
           Y R  KLV +Q LL   AK +E  V++V     +++V++P AVLK GE+R V  D EF +
Sbjct: 26  YARGQKLVIKQILLGAEAKENEFNVVEVNTP--KDSVQIPIAVLKAGETRAVNPDVEFYE 83

Query: 384 APVTXTLVQGFGVQY 428
           + VT  L++G G  Y
Sbjct: 84  SKVTFKLIKGSGPVY 98


>AE014297-4506|AAF56988.1|  152|Drosophila melanogaster CG7917-PA
           protein.
          Length = 152

 Score = 59.7 bits (138), Expect = 6e-09
 Identities = 32/75 (42%), Positives = 46/75 (61%)
 Frame = +3

Query: 204 YPRSNKLVXRQALLXPXAKPDELXVIQVEAMSLQEAVKLPXAVLKVGESRHVRLDXEFPD 383
           Y R  KLV +Q LL   AK +E  V++V     +++V++P AVLK GE+R V  D EF +
Sbjct: 26  YARGQKLVIKQILLGAEAKENEFNVVEVNTP--KDSVQIPIAVLKAGETRAVNPDVEFYE 83

Query: 384 APVTXTLVQGFGVQY 428
           + VT  L++G G  Y
Sbjct: 84  SKVTFKLIKGSGPVY 98


>U59497-1|AAC47294.1|  121|Drosophila melanogaster
           nucleoplasmin-like protein-short protein.
          Length = 121

 Score = 52.4 bits (120), Expect = 8e-07
 Identities = 28/69 (40%), Positives = 43/69 (62%)
 Frame = +3

Query: 222 LVXRQALLXPXAKPDELXVIQVEAMSLQEAVKLPXAVLKVGESRHVRLDXEFPDAPVTXT 401
           +V +Q LL   AK +E  V++V     +++V++P AVLK GE+R V  D EF ++ VT  
Sbjct: 1   MVIKQILLGAEAKENEFNVVEVNTP--KDSVQIPIAVLKAGETRAVNPDVEFYESKVTFK 58

Query: 402 LVQGFGVQY 428
           L++G G  Y
Sbjct: 59  LIKGSGPVY 67


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,139,833
Number of Sequences: 53049
Number of extensions: 470793
Number of successful extensions: 1157
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1156
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4525903863
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)