Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_J10
         (868 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q65UU3 Cluster: Putative uncharacterized protein; n=2; ...    35   2.3  
UniRef50_UPI0001552F36 Cluster: PREDICTED: similar to SH3 domain...    35   3.1  
UniRef50_Q5C3I4 Cluster: SJCHGC03138 protein; n=2; Schistosoma j...    34   4.1  
UniRef50_A7TC21 Cluster: Predicted protein; n=1; Nematostella ve...    27   6.4  
UniRef50_Q1EXK4 Cluster: GCN5-related N-acetyltransferase; n=1; ...    33   7.1  

>UniRef50_Q65UU3 Cluster: Putative uncharacterized protein; n=2;
           Pasteurellaceae|Rep: Putative uncharacterized protein -
           Mannheimia succiniciproducens (strain MBEL55E)
          Length = 449

 Score = 35.1 bits (77), Expect = 2.3
 Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
 Frame = -2

Query: 405 LLHSIYLGLCT*ILKNYF--SGFRCFRGLQIFIKFVEAVYHRAKVFLNSLPGPRRIQLFP 232
           LL  I+LGLC   + N F  S F  F G+ +F+ F+E + +  + F+NSL     + +F 
Sbjct: 10  LLIIIFLGLCIVTIDNIFIVSDFVLF-GIFLFLLFLEVIINPKRNFINSLV---LLAVFL 65

Query: 231 SIPQLFS-SHSQPAYLGY 181
           +I  +F+  HS+ +Y  Y
Sbjct: 66  NILGVFAIEHSEGSYYLY 83


>UniRef50_UPI0001552F36 Cluster: PREDICTED: similar to SH3 domain
           binding protein; n=2; Mus musculus|Rep: PREDICTED:
           similar to SH3 domain binding protein - Mus musculus
          Length = 455

 Score = 34.7 bits (76), Expect = 3.1
 Identities = 14/24 (58%), Positives = 14/24 (58%)
 Frame = -1

Query: 595 PXPPXXFXXLGAXXPPPKGXPPPP 524
           P PP     LGA  PPP G PPPP
Sbjct: 12  PPPPPPPPPLGAPPPPPLGAPPPP 35


>UniRef50_Q5C3I4 Cluster: SJCHGC03138 protein; n=2; Schistosoma
           japonicum|Rep: SJCHGC03138 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 156

 Score = 34.3 bits (75), Expect = 4.1
 Identities = 14/32 (43%), Positives = 14/32 (43%)
 Frame = -1

Query: 619 PXXXXGXXPXPPXXFXXLGAXXPPPKGXPPPP 524
           P    G  P PP  F       PPP G PPPP
Sbjct: 27  PLFFYGAPPPPPPFFFNKKKRPPPPPGGPPPP 58


>UniRef50_A7TC21 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 206

 Score = 26.6 bits (56), Expect(2) = 6.4
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -1

Query: 553 PPPKGXPPPP 524
           PPP+G PPPP
Sbjct: 154 PPPRGMPPPP 163



 Score = 25.8 bits (54), Expect(2) = 6.4
 Identities = 11/31 (35%), Positives = 12/31 (38%)
 Frame = -1

Query: 619 PXXXXGXXPXPPXXFXXLGAXXPPPKGXPPP 527
           P    G  P P   +       PPP G PPP
Sbjct: 118 PGGMRGMPPPPMGMYPPPRGFPPPPFGPPPP 148


>UniRef50_Q1EXK4 Cluster: GCN5-related N-acetyltransferase; n=1;
           Clostridium oremlandii OhILAs|Rep: GCN5-related
           N-acetyltransferase - Clostridium oremlandii OhILAs
          Length = 183

 Score = 33.5 bits (73), Expect = 7.1
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 10/64 (15%)
 Frame = -3

Query: 179 VFFRSISFDECMHIGEADSQQ----------DNQQLVHFGYLRTSSRIGYKNHHSNLKDS 30
           V +R ++ +EC+ IG  +  Q          D +QLV   Y  T    GY++H++NLK +
Sbjct: 4   VVYRELTVEECVLIGGMNPSQYIGRAWRQVDDKRQLVEINYHDTDWPNGYEHHYNNLKGT 63

Query: 29  L*XN 18
           +  N
Sbjct: 64  ILDN 67


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 664,969,991
Number of Sequences: 1657284
Number of extensions: 11962461
Number of successful extensions: 40927
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 29021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38773
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77062818868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)