Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_J10
         (868 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   3.0  
AY278447-1|AAP37004.1|  152|Anopheles gambiae microsomal glutath...    24   6.9  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    24   6.9  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -1

Query: 586 PXXFXXLGAXXPPPKGXPPPP 524
           P  F  L    PPP   PPPP
Sbjct: 570 PAGFPNLPNAQPPPAPPPPPP 590


>AY278447-1|AAP37004.1|  152|Anopheles gambiae microsomal
           glutathione transferase GSTMIC2protein.
          Length = 152

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 421 NNVENIITFDIFGVMYLDT 365
           N++ENI+ F + G +YL T
Sbjct: 75  NDLENILPFFVIGFLYLLT 93


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 11/32 (34%), Positives = 11/32 (34%)
 Frame = -1

Query: 619 PXXXXGXXPXPPXXFXXLGAXXPPPKGXPPPP 524
           P    G    PP      G   PP  G  PPP
Sbjct: 89  PGMIPGMPGAPPLLMGPNGPLPPPMMGMRPPP 120


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,386
Number of Sequences: 2352
Number of extensions: 11889
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92613024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)