Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_J10
(868 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.46
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.46
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.46
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 32 0.46
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 32 0.46
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 31 1.4
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 31 1.4
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 31 1.4
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 3.3
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 3.3
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 5.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 7.5
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 7.5
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 7.5
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 28 9.9
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.46
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = -3
Query: 854 GEPSPPNRAXVXGGXKGXXKPLPGGXIXXXXKXXPPPPPG 735
G P PP + GG P PGG PPPPPG
Sbjct: 712 GPPPPPGLPPITGGPP--PPPPPGGLPPITGGPPPPPPPG 749
Score = 25.0 bits (52), Expect(2) = 4.6
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 553 PPPKGXPPPP 524
PPP G PPPP
Sbjct: 763 PPPGGCPPPP 772
Score = 22.2 bits (45), Expect(2) = 4.6
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = -1
Query: 619 PXXXXGXXPXPPXXFXXLGAXXPPPKGXPPP 527
P G P P G PPP G PP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPP 737
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.46
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = -3
Query: 854 GEPSPPNRAXVXGGXKGXXKPLPGGXIXXXXKXXPPPPPG 735
G P PP + GG P PGG PPPPPG
Sbjct: 712 GPPPPPGLPPITGGPP--PPPPPGGLPPITGGPPPPPPPG 749
Score = 25.0 bits (52), Expect(2) = 4.6
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 553 PPPKGXPPPP 524
PPP G PPPP
Sbjct: 763 PPPGGCPPPP 772
Score = 22.2 bits (45), Expect(2) = 4.6
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = -1
Query: 619 PXXXXGXXPXPPXXFXXLGAXXPPPKGXPPP 527
P G P P G PPP G PP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPP 737
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.46
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = -3
Query: 854 GEPSPPNRAXVXGGXKGXXKPLPGGXIXXXXKXXPPPPPG 735
G P PP + GG P PGG PPPPPG
Sbjct: 295 GPPPPPGLPPITGGPP--PPPPPGGLPPITGGPPPPPPPG 332
Score = 25.0 bits (52), Expect(2) = 4.7
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 553 PPPKGXPPPP 524
PPP G PPPP
Sbjct: 346 PPPGGCPPPP 355
Score = 22.2 bits (45), Expect(2) = 4.7
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = -1
Query: 619 PXXXXGXXPXPPXXFXXLGAXXPPPKGXPPP 527
P G P P G PPP G PP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPP 320
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 32.3 bits (70), Expect = 0.46
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = -1
Query: 625 FFPXXXXGXXPXPPXXFXXLGAXXPPPKGXPPP 527
FFP G P PP F +G PPP PPP
Sbjct: 295 FFPPPPRGHFPPPPPHF--MGRGMPPPFMPPPP 325
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 32.3 bits (70), Expect = 0.46
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = -1
Query: 625 FFPXXXXGXXPXPPXXFXXLGAXXPPPKGXPPP 527
FFP G P PP F +G PPP PPP
Sbjct: 295 FFPPPPRGHFPPPPPHF--MGRGMPPPFMPPPP 325
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -1
Query: 619 PXXXXGXXPXPPXXFXXLGAXXPPPKGXPPPP 524
P G P PP +GA PPP PPPP
Sbjct: 227 PVNAHGAPPPPP--LPPVGAGAPPPPPPPPPP 256
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -1
Query: 619 PXXXXGXXPXPPXXFXXLGAXXPPPKGXPPPP 524
P G P PP +GA PPP PPPP
Sbjct: 213 PVNAHGAPPPPP--LPPVGAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -1
Query: 619 PXXXXGXXPXPPXXFXXLGAXXPPPKGXPPPP 524
P G P PP +GA PPP PPPP
Sbjct: 213 PVNAHGAPPPPP--LPPVGAGAPPPPPPPPPP 242
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 595 PXPPXXFXXLGAXXPPPKGXPPP 527
P PP +GA PPP PPP
Sbjct: 635 PPPPMGLPAVGAGAPPPPPPPPP 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 595 PXPPXXFXXLGAXXPPPKGXPPP 527
P PP +GA PPP PPP
Sbjct: 461 PPPPMGLPAVGAGAPPPPPPPPP 483
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = -3
Query: 848 PSPPNRAXVXGGXKGXXKPLPGGXIXXXXKXXPPPPPG 735
PSPP + G +P P G + PP PPG
Sbjct: 205 PSPPGQPGQPGEPGSPGEPGPDGRAGHPGRNGPPGPPG 242
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = -3
Query: 848 PSPPNRAXVXGGXKGXXKPLPGGXIXXXXKXXPPPPPG 735
PSPP + G +P P G + PP PPG
Sbjct: 205 PSPPGQPGQPGEPGSPGEPGPDGRAGHPGRNGPPGPPG 242
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = -1
Query: 619 PXXXXGXXPXPPXXFXXLGAXXPPPK--GXPPPP 524
P G P PP F G PPP G PPPP
Sbjct: 76 PPPGPGGIPPPPPMFAG-GIPPPPPMMGGIPPPP 108
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -1
Query: 619 PXXXXGXXPXPPXXFXXLGAXXPPPKGXPPPP 524
P P PP G+ PPP G PPPP
Sbjct: 256 PPPPAAGSPPPPRT----GSPPPPPTGSPPPP 283
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -1
Query: 619 PXXXXGXXPXPPXXFXXLGAXXPPPKGXPPPP 524
P P PP G+ PPP G PPPP
Sbjct: 277 PPPPAAGSPPPPRT----GSPPPPPTGSPPPP 304
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -1
Query: 619 PXXXXGXXPXPPXXFXXLGAXXPPPKGXPPPP 524
P P PP G+ PPP G PPPP
Sbjct: 262 PPPPAAGSPPPPRT----GSPPPPPTGSPPPP 289
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Frame = -3
Query: 860 PWGEPSPPNRAXVXGGXKGXXKP-LPGGXIXXXXKXXPPPPPG 735
P G P PP G G P PG + PP PPG
Sbjct: 203 PPGPPGPPGGPGNDGQPGGPGNPGAPGAVTEVPGQQGPPGPPG 245
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,172,738
Number of Sequences: 27780
Number of extensions: 312708
Number of successful extensions: 1277
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1174
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -