Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_J08
         (874 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   2.4  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   4.1  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    22   5.5  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   5.5  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   5.5  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   7.2  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/45 (24%), Positives = 16/45 (35%)
 Frame = +2

Query: 470 LENYMENYMQYXXXXXXXXXRMKPNCLPSKFDCRADRKRKFTHSE 604
           ++ YM    Q           M+P C+  +  C   RK K    E
Sbjct: 232 IDMYMRRKCQECRLKKCLSVGMRPECVVPEVQCAVKRKEKKAQKE 276


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 212 PNTFFPSSYIPIAMKV*KR 268
           PN F P  Y PI +++  R
Sbjct: 31  PNNFLPERYKPIGVQIANR 49


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 382 YIPNISKITF*YFFYRLCIE 441
           +IP  + +TF  F Y+ C+E
Sbjct: 160 WIPLCNSVTFSNFGYKQCVE 179


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 382 YIPNISKITF*YFFYRLCIE 441
           +IP  + +TF  F Y+ C+E
Sbjct: 393 WIPLCNSVTFSNFGYKQCVE 412


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 382 YIPNISKITF*YFFYRLCIE 441
           +IP  + +TF  F Y+ C+E
Sbjct: 393 WIPLCNSVTFSNFGYKQCVE 412


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 676 LIFSRLFNFLDNSESLPFHKCRPRF 602
           LIF    +FLDN +++ + K    F
Sbjct: 225 LIFFATLDFLDNVDTIMYEKTNVTF 249


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,956
Number of Sequences: 336
Number of extensions: 3481
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24099889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)