Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_I24
(898 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 281 4e-76
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 272 2e-73
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 266 1e-71
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 266 1e-71
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 264 4e-71
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 263 1e-70
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 210 1e-54
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 210 1e-54
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 137 1e-32
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 137 1e-32
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 135 5e-32
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 135 5e-32
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 134 6e-32
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 134 8e-32
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 130 1e-30
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 130 1e-30
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 130 1e-30
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 128 4e-30
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 128 5e-30
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 128 5e-30
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 128 5e-30
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 126 2e-29
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 122 3e-28
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 106 2e-23
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 106 2e-23
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 106 2e-23
AL021482-3|CAA16340.3| 1499|Caenorhabditis elegans Hypothetical ... 30 2.0
AF177199-1|AAK81894.1| 1455|Caenorhabditis elegans mutant dosage... 30 2.0
Z73973-1|CAA98266.1| 357|Caenorhabditis elegans Hypothetical pr... 29 6.0
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 29 6.0
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 281 bits (690), Expect = 4e-76
Identities = 126/132 (95%), Positives = 131/132 (99%)
Frame = +2
Query: 134 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 313
MREIVHIQAGQCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 314 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 493
PRA LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 494 RKEAESCDCLQG 529
RKEAESCDCLQG
Sbjct: 121 RKEAESCDCLQG 132
Score = 130 bits (315), Expect = 1e-30
Identities = 60/67 (89%), Positives = 62/67 (92%)
Frame = +3
Query: 594 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 773
KIREEYPDRIM T+SVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFR
Sbjct: 154 KIREEYPDRIMMTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFR 213
Query: 774 TLNYPHP 794
TL P
Sbjct: 214 TLKLTTP 220
Score = 81.4 bits (192), Expect = 8e-16
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = +2
Query: 779 KLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKL 892
KL+TPTYGDLNHLVS+TMSGVTTCLRFPGQLNADLRKL
Sbjct: 216 KLTTPTYGDLNHLVSMTMSGVTTCLRFPGQLNADLRKL 253
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 272 bits (667), Expect = 2e-73
Identities = 120/132 (90%), Positives = 127/132 (96%)
Frame = +2
Query: 134 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 313
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 314 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 493
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 494 RKEAESCDCLQG 529
RKEAE CDCLQG
Sbjct: 121 RKEAEGCDCLQG 132
Score = 131 bits (317), Expect = 6e-31
Identities = 59/67 (88%), Positives = 64/67 (95%)
Frame = +3
Query: 594 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 773
KIREEYPDRIM+++SVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFR
Sbjct: 154 KIREEYPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFR 213
Query: 774 TLNYPHP 794
TL +P
Sbjct: 214 TLKLSNP 220
Score = 80.2 bits (189), Expect = 2e-15
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +2
Query: 779 KLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKL 892
KLS PTYGDLNHLVS+TMSGVTTCLRFPGQLNADLRKL
Sbjct: 216 KLSNPTYGDLNHLVSVTMSGVTTCLRFPGQLNADLRKL 253
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 266 bits (652), Expect = 1e-71
Identities = 119/132 (90%), Positives = 126/132 (95%)
Frame = +2
Query: 134 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 313
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 314 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 493
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 494 RKEAESCDCLQG 529
RKEAES DCLQG
Sbjct: 121 RKEAESTDCLQG 132
Score = 132 bits (318), Expect = 4e-31
Identities = 60/67 (89%), Positives = 62/67 (92%)
Frame = +3
Query: 594 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 773
KIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVENTD T+CIDNEALYDICFR
Sbjct: 154 KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDSTFCIDNEALYDICFR 213
Query: 774 TLNYPHP 794
TL P
Sbjct: 214 TLKLTTP 220
Score = 80.2 bits (189), Expect = 2e-15
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +2
Query: 779 KLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKL 892
KL+TPTYGDLNHLVS TMSGVTTCLRFPGQLNADLRKL
Sbjct: 216 KLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKL 253
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 266 bits (652), Expect = 1e-71
Identities = 119/132 (90%), Positives = 126/132 (95%)
Frame = +2
Query: 134 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 313
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 314 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 493
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 494 RKEAESCDCLQG 529
RKEAES DCLQG
Sbjct: 121 RKEAESTDCLQG 132
Score = 132 bits (318), Expect = 4e-31
Identities = 60/67 (89%), Positives = 62/67 (92%)
Frame = +3
Query: 594 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 773
KIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVENTD T+CIDNEALYDICFR
Sbjct: 154 KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDSTFCIDNEALYDICFR 213
Query: 774 TLNYPHP 794
TL P
Sbjct: 214 TLKLTTP 220
Score = 80.2 bits (189), Expect = 2e-15
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +2
Query: 779 KLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKL 892
KL+TPTYGDLNHLVS TMSGVTTCLRFPGQLNADLRKL
Sbjct: 216 KLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKL 253
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 264 bits (648), Expect = 4e-71
Identities = 115/132 (87%), Positives = 126/132 (95%)
Frame = +2
Query: 134 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 313
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 314 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 493
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 494 RKEAESCDCLQG 529
RKEAE CDCLQG
Sbjct: 121 RKEAEGCDCLQG 132
Score = 130 bits (314), Expect = 1e-30
Identities = 58/67 (86%), Positives = 64/67 (95%)
Frame = +3
Query: 594 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 773
KIREE+PDRIM+++SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC+R
Sbjct: 154 KIREEFPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICYR 213
Query: 774 TLNYPHP 794
TL +P
Sbjct: 214 TLKLTNP 220
Score = 80.2 bits (189), Expect = 2e-15
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +2
Query: 779 KLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKL 892
KL+ PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKL
Sbjct: 216 KLTNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKL 253
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 263 bits (645), Expect = 1e-70
Identities = 114/132 (86%), Positives = 126/132 (95%)
Frame = +2
Query: 134 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 313
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 314 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 493
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 494 RKEAESCDCLQG 529
RKEAE CDCLQG
Sbjct: 121 RKEAEGCDCLQG 132
Score = 132 bits (318), Expect = 4e-31
Identities = 59/67 (88%), Positives = 64/67 (95%)
Frame = +3
Query: 594 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 773
KIREEYPDRIM+++SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC+R
Sbjct: 154 KIREEYPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICYR 213
Query: 774 TLNYPHP 794
TL +P
Sbjct: 214 TLKLTNP 220
Score = 80.2 bits (189), Expect = 2e-15
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +2
Query: 779 KLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKL 892
KL+ PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKL
Sbjct: 216 KLTNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKL 253
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 210 bits (512), Expect = 1e-54
Identities = 115/259 (44%), Positives = 159/259 (61%), Gaps = 6/259 (2%)
Frame = +2
Query: 134 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 313
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 314 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 493
PRAILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 494 RKEAESCDCLQGIPTDTLARRRHRFRYGHPPHLQNQRRVP*QNNEHIFSCTIT*SVGHSS 673
R+EAE+ D L+G + G L ++ R +++ + +C+I S S
Sbjct: 121 RREAEAADSLEGF--QLIHSLGGGTGSGLGSLLISKLREE-YSDKTLSTCSIIPSAKVSD 177
Query: 674 RTVQRHTFSSSIS*KH-----RRNLLYRQRGSLRYLLPHAKL-STPTYGDLNHLVSLTMS 835
V+ +++ +S H N + KL + TYGDLNHL SL +S
Sbjct: 178 TVVE--PYNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKLENRVTYGDLNHLASLALS 235
Query: 836 GVTTCLRFPGQLNADLRKL 892
G+TT RF G L D+RKL
Sbjct: 236 GITTFQRFKGNLKTDIRKL 254
Score = 89.4 bits (212), Expect = 3e-18
Identities = 37/58 (63%), Positives = 49/58 (84%)
Frame = +3
Query: 594 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 767
K+REEY D+ ++T S++PS KVSDTVVEPYNA LS+ L++N DE +CIDNEA++DIC
Sbjct: 154 KLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAILSMPHLMDNCDENFCIDNEAIFDIC 211
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 210 bits (512), Expect = 1e-54
Identities = 115/259 (44%), Positives = 159/259 (61%), Gaps = 6/259 (2%)
Frame = +2
Query: 134 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 313
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 314 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 493
PRAILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 494 RKEAESCDCLQGIPTDTLARRRHRFRYGHPPHLQNQRRVP*QNNEHIFSCTIT*SVGHSS 673
R+EAE+ D L+G + G L ++ R +++ + +C+I S S
Sbjct: 121 RREAEAADSLEGF--QLIHSLGGGTGSGLGSLLISKLREE-YSDKTLSTCSIIPSAKVSD 177
Query: 674 RTVQRHTFSSSIS*KH-----RRNLLYRQRGSLRYLLPHAKL-STPTYGDLNHLVSLTMS 835
V+ +++ +S H N + KL + TYGDLNHL SL +S
Sbjct: 178 TVVE--PYNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKLENRVTYGDLNHLASLALS 235
Query: 836 GVTTCLRFPGQLNADLRKL 892
G+TT RF G L D+RKL
Sbjct: 236 GITTFQRFKGNLKTDIRKL 254
Score = 89.4 bits (212), Expect = 3e-18
Identities = 37/58 (63%), Positives = 49/58 (84%)
Frame = +3
Query: 594 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 767
K+REEY D+ ++T S++PS KVSDTVVEPYNA LS+ L++N DE +CIDNEA++DIC
Sbjct: 154 KLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAILSMPHLMDNCDENFCIDNEAIFDIC 211
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 137 bits (331), Expect = 1e-32
Identities = 58/132 (43%), Positives = 84/132 (63%)
Frame = +2
Query: 134 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 313
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 314 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 493
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 494 RKEAESCDCLQG 529
R+ A++C LQG
Sbjct: 121 RRLADNCSGLQG 132
Score = 66.1 bits (154), Expect = 3e-11
Identities = 27/67 (40%), Positives = 44/67 (65%)
Frame = +3
Query: 594 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 773
++ +Y + +S+ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R
Sbjct: 154 RLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 213
Query: 774 TLNYPHP 794
L+ P
Sbjct: 214 NLSVDRP 220
Score = 37.5 bits (83), Expect = 0.013
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 791 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRK 889
P+Y +LN ++S +S +T LRF G LN DL +
Sbjct: 220 PSYTNLNRIISQVVSSITASLRFDGALNVDLNE 252
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 137 bits (331), Expect = 1e-32
Identities = 58/132 (43%), Positives = 84/132 (63%)
Frame = +2
Query: 134 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 313
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 314 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 493
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 494 RKEAESCDCLQG 529
R+ A++C LQG
Sbjct: 121 RRLADNCSGLQG 132
Score = 64.1 bits (149), Expect = 1e-10
Identities = 26/67 (38%), Positives = 43/67 (64%)
Frame = +3
Query: 594 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 773
++ +Y + +S+ P+P+V VVEPYN+ L+ H +E++D + +DNEA+YDIC R
Sbjct: 154 RLSVDYGKKSKLEFSIYPAPQVCTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 213
Query: 774 TLNYPHP 794
L+ P
Sbjct: 214 NLSVDRP 220
Score = 37.5 bits (83), Expect = 0.013
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 791 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRK 889
P+Y +LN ++S +S +T LRF G LN DL +
Sbjct: 220 PSYTNLNRIISQVVSSITASLRFDGALNVDLNE 252
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 135 bits (326), Expect = 5e-32
Identities = 58/132 (43%), Positives = 85/132 (64%)
Frame = +2
Query: 134 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 313
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 314 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 493
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 494 RKEAESCDCLQG 529
R+ A++C LQG
Sbjct: 121 RRLADNCSGLQG 132
Score = 66.1 bits (154), Expect = 3e-11
Identities = 27/67 (40%), Positives = 44/67 (65%)
Frame = +3
Query: 594 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 773
++ +Y + +S+ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R
Sbjct: 154 RLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 213
Query: 774 TLNYPHP 794
L+ P
Sbjct: 214 NLDVERP 220
Score = 37.5 bits (83), Expect = 0.013
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 791 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRK 889
P+Y +LN ++S +S +T LRF G LN DL +
Sbjct: 220 PSYTNLNRIISQVVSSITASLRFDGALNVDLNE 252
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 135 bits (326), Expect = 5e-32
Identities = 58/132 (43%), Positives = 85/132 (64%)
Frame = +2
Query: 134 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 313
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 314 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 493
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 494 RKEAESCDCLQG 529
R+ A++C LQG
Sbjct: 121 RRLADNCSGLQG 132
Score = 66.1 bits (154), Expect = 3e-11
Identities = 27/67 (40%), Positives = 44/67 (65%)
Frame = +3
Query: 594 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 773
++ +Y + +S+ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R
Sbjct: 154 RLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 213
Query: 774 TLNYPHP 794
L+ P
Sbjct: 214 NLDVERP 220
Score = 37.5 bits (83), Expect = 0.013
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 791 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRK 889
P+Y +LN ++S +S +T LRF G LN DL +
Sbjct: 220 PSYTNLNRIISQVVSSITASLRFDGALNVDLNE 252
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 134 bits (325), Expect = 6e-32
Identities = 64/134 (47%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Frame = +2
Query: 134 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGK 307
MREIV I GQ G QIG WE+ EHGI P G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 308 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 487
+VPRAI VDLEP +D VR+G + ++F P+ + G+ A NN+A+GHYT G EL+D V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 488 VVRKEAESCDCLQG 529
VR+ E C LQG
Sbjct: 121 RVRRLTERCQSLQG 134
Score = 54.4 bits (125), Expect = 1e-07
Identities = 20/53 (37%), Positives = 39/53 (73%)
Frame = +3
Query: 606 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 764
+Y + +S+ P+P++S ++VEPYN+ L+ H +E++D ++ +DNEA+Y+I
Sbjct: 160 DYGKKAKLEFSIYPAPQISTSMVEPYNSLLTTHTTLEHSDCSFIMDNEAIYEI 212
Score = 37.1 bits (82), Expect = 0.017
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +2
Query: 788 TPTYGDLNHLVSLTMSGVTTCLRFPGQLNADL 883
+PTY LN L++ +S +T LRF G LN DL
Sbjct: 221 SPTYTHLNRLLAQVVSSITASLRFDGALNVDL 252
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 134 bits (324), Expect = 8e-32
Identities = 60/132 (45%), Positives = 86/132 (65%), Gaps = 1/132 (0%)
Frame = +2
Query: 137 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAY-HGDSDLQLERINVYYNEASGGKYV 313
RE V I GQ G QIG WE+ EHG+D G + + + + + +++E+ GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 314 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 493
PRAI VDLEP +D +R+G +G +F PD + G+ A NN+A+GHYT G EL+D VLD +
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRI 125
Query: 494 RKEAESCDCLQG 529
RK+ E+C+ LQG
Sbjct: 126 RKQTENCEGLQG 137
Score = 62.5 bits (145), Expect = 4e-10
Identities = 26/67 (38%), Positives = 45/67 (67%)
Frame = +3
Query: 594 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 773
++ E+ + +SV P+P+VS +VVEPYN+ L+ H +E +D ++ +DNEA+YD+C +
Sbjct: 159 RLSVEFGKKSKLEFSVYPAPQVSTSVVEPYNSILTTHTTLELSDCSFMVDNEAIYDLCRQ 218
Query: 774 TLNYPHP 794
L+ P
Sbjct: 219 KLHVERP 225
Score = 37.9 bits (84), Expect = 0.010
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 791 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRK 889
P+Y +LN L++ +S +T LRF G LN DL +
Sbjct: 225 PSYSNLNRLIAQVVSSITASLRFDGALNVDLNE 257
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 130 bits (315), Expect = 1e-30
Identities = 55/132 (41%), Positives = 83/132 (62%)
Frame = +2
Query: 134 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 313
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 314 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 493
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 494 RKEAESCDCLQG 529
R+ A++C LQG
Sbjct: 121 RRLADNCSGLQG 132
Score = 66.1 bits (154), Expect = 3e-11
Identities = 27/67 (40%), Positives = 44/67 (65%)
Frame = +3
Query: 594 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 773
++ +Y + +S+ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R
Sbjct: 154 RLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKR 213
Query: 774 TLNYPHP 794
L+ P
Sbjct: 214 NLDVDRP 220
Score = 37.5 bits (83), Expect = 0.013
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 791 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRK 889
P+Y +LN ++S +S +T LRF G LN DL +
Sbjct: 220 PSYTNLNRIISQVVSSITASLRFDGALNVDLNE 252
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 130 bits (315), Expect = 1e-30
Identities = 55/132 (41%), Positives = 83/132 (62%)
Frame = +2
Query: 134 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 313
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 314 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 493
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 494 RKEAESCDCLQG 529
R+ A++C LQG
Sbjct: 121 RRLADNCSGLQG 132
Score = 66.1 bits (154), Expect = 3e-11
Identities = 27/67 (40%), Positives = 44/67 (65%)
Frame = +3
Query: 594 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 773
++ +Y + +S+ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R
Sbjct: 154 RLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKR 213
Query: 774 TLNYPHP 794
L+ P
Sbjct: 214 NLDVDRP 220
Score = 37.5 bits (83), Expect = 0.013
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 791 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRK 889
P+Y +LN ++S +S +T LRF G LN DL +
Sbjct: 220 PSYTNLNRIISQVVSSITASLRFDGALNVDLNE 252
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 130 bits (314), Expect = 1e-30
Identities = 58/136 (42%), Positives = 87/136 (63%), Gaps = 2/136 (1%)
Frame = +2
Query: 128 NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASG 301
N+ RE++ I GQ G Q+G WE+ EHGI P G + + L ++ N +++E
Sbjct: 4 NRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMA 63
Query: 302 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 481
GK+VPRAI+VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 64 GKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVV 123
Query: 482 LDVVRKEAESCDCLQG 529
+D VR+ E+C LQG
Sbjct: 124 MDRVRRLVENCRGLQG 139
Score = 63.7 bits (148), Expect = 2e-10
Identities = 25/67 (37%), Positives = 45/67 (67%)
Frame = +3
Query: 594 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 773
++ +Y + + + P+P+VS ++VEPYN+ L+ H +E++D ++ +DNEA+YDIC R
Sbjct: 161 RLSVDYGKKSKLEFCIYPAPQVSTSMVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRR 220
Query: 774 TLNYPHP 794
L+ P
Sbjct: 221 NLDLARP 227
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = +2
Query: 782 LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADL 883
L+ PTY +LN L++ +S VT LRF G LN DL
Sbjct: 224 LARPTYTNLNRLIAQVISSVTASLRFDGALNVDL 257
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 128 bits (310), Expect = 4e-30
Identities = 60/134 (44%), Positives = 86/134 (64%), Gaps = 3/134 (2%)
Frame = +2
Query: 137 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNEASGGK 307
RE++ I GQ G QIG WE+ EHGI P G YH + D + E IN ++ E +GGK
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
Query: 308 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 487
+VPR + VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V+D
Sbjct: 67 HVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMD 126
Query: 488 VVRKEAESCDCLQG 529
V++ AE+C+ LQG
Sbjct: 127 RVKRLAENCNGLQG 140
Score = 66.5 bits (155), Expect = 2e-11
Identities = 27/67 (40%), Positives = 45/67 (67%)
Frame = +3
Query: 594 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 773
++ EY + +++ P+P+VS ++VEPYN+ L H +E++D T+ +DNEA+YDIC R
Sbjct: 162 RLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVDNEAIYDICRR 221
Query: 774 TLNYPHP 794
L+ P
Sbjct: 222 NLDLARP 228
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = +2
Query: 782 LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADL 883
L+ PTY +LN LV+ +S +T LRF G LN DL
Sbjct: 225 LARPTYTNLNRLVAQIISSITASLRFEGALNVDL 258
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 128 bits (309), Expect = 5e-30
Identities = 56/134 (41%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Frame = +2
Query: 134 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 307
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 308 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 487
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 488 VVRKEAESCDCLQG 529
+R+ A++C LQG
Sbjct: 121 RIRRLADNCTGLQG 134
Score = 66.9 bits (156), Expect = 2e-11
Identities = 27/67 (40%), Positives = 45/67 (67%)
Frame = +3
Query: 594 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 773
++ +Y + +S+ P+P+VS VVEPYN+ L+ H +E++D ++ +DNEA+YDIC R
Sbjct: 156 RLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRR 215
Query: 774 TLNYPHP 794
L+ P
Sbjct: 216 NLDIERP 222
Score = 36.3 bits (80), Expect = 0.030
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 782 LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADL 883
+ P+Y +LN L+ +S +T LRF G LN DL
Sbjct: 219 IERPSYTNLNRLIGQIVSSITASLRFDGALNVDL 252
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 128 bits (309), Expect = 5e-30
Identities = 56/134 (41%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Frame = +2
Query: 134 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 307
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 308 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 487
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 488 VVRKEAESCDCLQG 529
+R+ A++C LQG
Sbjct: 121 RIRRLADNCTGLQG 134
Score = 66.9 bits (156), Expect = 2e-11
Identities = 27/67 (40%), Positives = 45/67 (67%)
Frame = +3
Query: 594 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 773
++ +Y + +S+ P+P+VS VVEPYN+ L+ H +E++D ++ +DNEA+YDIC R
Sbjct: 156 RLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRR 215
Query: 774 TLNYPHP 794
L+ P
Sbjct: 216 NLDIERP 222
Score = 36.3 bits (80), Expect = 0.030
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 782 LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADL 883
+ P+Y +LN L+ +S +T LRF G LN DL
Sbjct: 219 IERPSYTNLNRLIGQIVSSITASLRFDGALNVDL 252
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 128 bits (309), Expect = 5e-30
Identities = 56/134 (41%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Frame = +2
Query: 134 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 307
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 308 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 487
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 488 VVRKEAESCDCLQG 529
+R+ A++C LQG
Sbjct: 121 RIRRLADNCTGLQG 134
Score = 66.9 bits (156), Expect = 2e-11
Identities = 27/67 (40%), Positives = 45/67 (67%)
Frame = +3
Query: 594 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 773
++ +Y + +S+ P+P+VS VVEPYN+ L+ H +E++D ++ +DNEA+YDIC R
Sbjct: 156 RLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRR 215
Query: 774 TLNYPHP 794
L+ P
Sbjct: 216 NLDIERP 222
Score = 36.3 bits (80), Expect = 0.030
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 782 LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADL 883
+ P+Y +LN L+ +S +T LRF G LN DL
Sbjct: 219 IERPSYTNLNRLIGQIVSSITASLRFDGALNVDL 252
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 126 bits (304), Expect = 2e-29
Identities = 55/133 (41%), Positives = 83/133 (62%), Gaps = 2/133 (1%)
Frame = +2
Query: 137 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 310
RE++ I GQ G QIG WE+ EHGI P G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 311 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 490
VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 491 VRKEAESCDCLQG 529
+R+ A++C LQG
Sbjct: 121 IRRLADNCTGLQG 133
Score = 66.9 bits (156), Expect = 2e-11
Identities = 27/67 (40%), Positives = 45/67 (67%)
Frame = +3
Query: 594 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 773
++ +Y + +S+ P+P+VS VVEPYN+ L+ H +E++D ++ +DNEA+YDIC R
Sbjct: 155 RLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRR 214
Query: 774 TLNYPHP 794
L+ P
Sbjct: 215 NLDIERP 221
Score = 36.3 bits (80), Expect = 0.030
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 782 LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADL 883
+ P+Y +LN L+ +S +T LRF G LN DL
Sbjct: 218 IERPSYTNLNRLIGQIVSSITASLRFDGALNVDL 251
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 122 bits (294), Expect = 3e-28
Identities = 54/132 (40%), Positives = 84/132 (63%)
Frame = +2
Query: 134 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 313
MRE++ I GQ G QIG WE+ EHGI P G + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSM-EPDGNSGSLGTFFSDTGYGRHV 59
Query: 314 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 493
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E++D+ LD +
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRI 119
Query: 494 RKEAESCDCLQG 529
R+ A +C+ LQG
Sbjct: 120 RRLANNCEGLQG 131
Score = 67.7 bits (158), Expect = 1e-11
Identities = 27/67 (40%), Positives = 45/67 (67%)
Frame = +3
Query: 594 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 773
++ EY + +S+ P+P++S +VVEPYN+ L+ H +E++D ++ +DNEA+YDIC R
Sbjct: 153 RLSAEYGKKSKLEFSIYPAPQISTSVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRR 212
Query: 774 TLNYPHP 794
L P
Sbjct: 213 NLRVSRP 219
Score = 42.3 bits (95), Expect = 5e-04
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2
Query: 779 KLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRK 889
++S PTY +LN ++S +S +T LRF G LN DL +
Sbjct: 215 RVSRPTYNNLNRIISQVVSSITASLRFDGALNVDLNE 251
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 106 bits (255), Expect = 2e-23
Identities = 51/133 (38%), Positives = 80/133 (60%), Gaps = 3/133 (2%)
Frame = +2
Query: 143 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 322
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 323 ILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVV 493
+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D++
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
Query: 494 RKEAESCDCLQGI 532
+EAE+ + L GI
Sbjct: 125 IREAENTNNLDGI 137
Score = 53.6 bits (123), Expect = 2e-07
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +3
Query: 594 KIREEYPDRIMNTYSVVPSPKVS-DTVVEPYNATLSVHQLVENTDETYCIDNEALY 758
++RE +P +++ TYSV + S D VV PYN LS+ +L+EN D +DN AL+
Sbjct: 158 RLREAFPKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLIENPDHVVVLDNAALH 213
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 106 bits (255), Expect = 2e-23
Identities = 51/133 (38%), Positives = 80/133 (60%), Gaps = 3/133 (2%)
Frame = +2
Query: 143 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 322
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 323 ILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVV 493
+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D++
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
Query: 494 RKEAESCDCLQGI 532
+EAE+ + L GI
Sbjct: 125 IREAENTNNLDGI 137
Score = 53.6 bits (123), Expect = 2e-07
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +3
Query: 594 KIREEYPDRIMNTYSVVPSPKVS-DTVVEPYNATLSVHQLVENTDETYCIDNEALY 758
++RE +P +++ TYSV + S D VV PYN LS+ +L+EN D +DN AL+
Sbjct: 158 RLREAFPKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLIENPDHVVVLDNAALH 213
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 106 bits (254), Expect = 2e-23
Identities = 49/109 (44%), Positives = 72/109 (66%), Gaps = 3/109 (2%)
Frame = +2
Query: 212 EHGIDPTGAYHGDSDL---QLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQ 382
EHGI P G YH + D + E IN ++ E +GGK+VPR + VDLEP +D VR+G +
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRS 63
Query: 383 IFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 529
+F P+ + G+ A N +A+G YT G E++D V+D V++ AE+C+ LQG
Sbjct: 64 LFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQG 112
Score = 66.5 bits (155), Expect = 2e-11
Identities = 27/67 (40%), Positives = 45/67 (67%)
Frame = +3
Query: 594 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 773
++ EY + +++ P+P+VS ++VEPYN+ L H +E++D T+ +DNEA+YDIC R
Sbjct: 134 RLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVDNEAIYDICRR 193
Query: 774 TLNYPHP 794
L+ P
Sbjct: 194 NLDLARP 200
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = +2
Query: 782 LSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADL 883
L+ PTY +LN LV+ +S +T LRF G LN DL
Sbjct: 197 LARPTYTNLNRLVAQIISSITASLRFEGALNVDL 230
>AL021482-3|CAA16340.3| 1499|Caenorhabditis elegans Hypothetical
protein Y39A1B.3 protein.
Length = 1499
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +1
Query: 754 STISASAR*TIHT--HIRRPEPPGVADH--VRRDDVPAVPRTAERRPAQ 888
+T+S S+R T RR PP +D DD PA PR+A RR A+
Sbjct: 1433 TTMSGSSRTTSRAANSRRRAPPPAQSDEDDSDSDDAPAAPRSAARRKAK 1481
>AF177199-1|AAK81894.1| 1455|Caenorhabditis elegans mutant dosage
compensation protein protein.
Length = 1455
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +1
Query: 754 STISASAR*TIHT--HIRRPEPPGVADH--VRRDDVPAVPRTAERRPAQ 888
+T+S S+R T RR PP +D DD PA PR+A RR A+
Sbjct: 1389 TTMSGSSRTTSRAANSRRRAPPPAQSDEDDSDSDDAPAAPRSAARRKAK 1437
>Z73973-1|CAA98266.1| 357|Caenorhabditis elegans Hypothetical
protein F25D1.2 protein.
Length = 357
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = -2
Query: 546 SVSVGIPWRQSHDSASFRTTSKTESTSSAPSV*CPLAQLLPAPDCPKTKLSGR 388
+VS+G+P Q++ + F T ++ SV P+ QL+P + +S R
Sbjct: 204 NVSIGVPLMQTYSALIFTYYGMTTHSALLFSVFYPILQLIPVMVSTRVNISRR 256
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 28.7 bits (61), Expect = 6.0
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Frame = -2
Query: 516 SHDSASFRTTSKTESTSSAPSV*CPLAQLL-----PAPDCPKTKLSGRKICPKGPERTES 352
S A R + + S SS+PS CP LL PAP P + G PK +
Sbjct: 294 SDGRAGSRISLASTSASSSPSDPCPSPPLLPPVCPPAPPPPPPPIGGLTSPPKDALKNVP 353
Query: 351 MVPGSKST 328
PG+ T
Sbjct: 354 EPPGNMKT 361
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,328,410
Number of Sequences: 27780
Number of extensions: 400474
Number of successful extensions: 1291
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1274
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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