Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_I23
         (895 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    27   0.15 
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    25   0.80 
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    22   7.5  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   9.9  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 27.5 bits (58), Expect = 0.15
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -2

Query: 312 NITYFHLCPGVYNVLFIEYKFVQLFQCIIIFNCFV 208
           N+T+ HL   V N+L +   FV L   II+ +C V
Sbjct: 246 NVTFVHLA--VLNILRVGKNFVCLLSLIILCDCVV 278


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 25.0 bits (52), Expect = 0.80
 Identities = 9/24 (37%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
 Frame = -2

Query: 285 GVY-NVLFIEYKFVQLFQCIIIFN 217
           G++ N+ F+E+  ++L  C+I FN
Sbjct: 129 GIFINLPFLEHNLIRLKNCVIYFN 152


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/44 (20%), Positives = 24/44 (54%)
 Frame = +1

Query: 133 NQVTLINL**NLENMPRTKRPVRKQDKTVEDDDTLKKLNKLVLD 264
           NQ+ +      + +  R+ +P+ ++ +    +++L +L  L+LD
Sbjct: 20  NQIEMAAATKRVSDNRRSNKPIMEKRRRARINNSLNELKTLILD 63


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 303 YFHLCPGVYNVLFIEYKF 250
           YF +C   ++ LFI  +F
Sbjct: 339 YFQICGSAFSYLFIMLQF 356


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,670
Number of Sequences: 336
Number of extensions: 2348
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24823920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)