Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_I23
         (895 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_50322| Best HMM Match : 7tm_1 (HMM E-Value=3.4e-33)                 28   8.9  
SB_50321| Best HMM Match : 7tm_1 (HMM E-Value=1.3e-32)                 28   8.9  
SB_48374| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.9  
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)              28   8.9  
SB_43935| Best HMM Match : 7tm_1 (HMM E-Value=0)                       28   8.9  
SB_39385| Best HMM Match : 7tm_1 (HMM E-Value=2.9e-28)                 28   8.9  

>SB_50322| Best HMM Match : 7tm_1 (HMM E-Value=3.4e-33)
          Length = 418

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = -2

Query: 303 YFHLC-PGVYNVLFIEYKFVQLFQCIIIFNCFVLLPYRTFGSRHVF 169
           YF +  P  Y +LF   +   L     +F CF  +PY   G ++ F
Sbjct: 124 YFQVVRPNYYRILFTPSRTRFLICGTFLFACFAPVPYLASGEKYTF 169


>SB_50321| Best HMM Match : 7tm_1 (HMM E-Value=1.3e-32)
          Length = 395

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = -2

Query: 303 YFHLC-PGVYNVLFIEYKFVQLFQCIIIFNCFVLLPYRTFGSRHVF 169
           YF +  P  Y +LF   +   L     +F CF  +PY   G ++ F
Sbjct: 124 YFQVVRPNYYRILFTPSRTRFLICGTFLFACFAPVPYLASGEKYTF 169


>SB_48374| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 573

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +1

Query: 163 NLENMPRTKRPVRKQDKTVEDDDTLKK 243
           NL+ +P T  PVR    T+ED D   K
Sbjct: 244 NLDELPTTPPPVRTNHTTMEDPDPFTK 270


>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
          Length = 2858

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
 Frame = +1

Query: 103  LSIDYRRIDLNQVTLINL**NLENMPRTKRPVRKQDKTVEDDDTLKKLNKLVLDEKNVID 282
            L  D RR++ +  T I     +ENM +  R V ++   +E  +   + N   ++E+N+  
Sbjct: 1504 LKKDMRRVEADYETAIQ---KIENMEKANRSVNEKILIIEKSNDRDRENAKRMEEENINL 1560

Query: 283  SR--TQMEIRN 309
             R   +M+I N
Sbjct: 1561 KRRVAEMDINN 1571


>SB_43935| Best HMM Match : 7tm_1 (HMM E-Value=0)
          Length = 842

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = -2

Query: 303 YFHLC-PGVYNVLFIEYKFVQLFQCIIIFNCFVLLPYRTFGSRHVF 169
           YF +  P  Y +LF   +   L     +F CF  +PY   G ++ F
Sbjct: 554 YFQVVRPNYYRILFTPSRTRFLICGTFLFACFAPVPYLASGEKYTF 599


>SB_39385| Best HMM Match : 7tm_1 (HMM E-Value=2.9e-28)
          Length = 360

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -1

Query: 460 HHVRQICLNSLFVLCSSSLLGGVILFLIHQQSSASTY 350
           +H+ QI   SL VLCS S +  +I  L +++    TY
Sbjct: 280 YHIFQIWTWSLIVLCSGSAMNPIIYGLRNREFRRKTY 316


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,288,120
Number of Sequences: 59808
Number of extensions: 280407
Number of successful extensions: 724
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 724
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2562198215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)