Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_I23
(895 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y12490-1|CAA73095.1| 1979|Homo sapiens Golgi-associated microtub... 31 7.5
BX641024-1|CAE46015.1| 1694|Homo sapiens hypothetical protein pr... 31 7.5
AF007217-1|AAD09135.1| 1978|Homo sapiens Trip230 protein. 31 7.5
X52560-1|CAA36794.1| 345|Homo sapiens protein ( Human gene for ... 30 9.9
BC021931-1|AAH21931.1| 345|Homo sapiens CCAAT/enhancer binding ... 30 9.9
BC007538-1|AAH07538.1| 345|Homo sapiens CCAAT/enhancer binding ... 30 9.9
BC005132-1|AAH05132.2| 137|Homo sapiens CEBPB protein protein. 30 9.9
AY193834-1|AAN86350.1| 345|Homo sapiens CCAAT/enhancer binding ... 30 9.9
AL161937-1|CAC14276.1| 345|Homo sapiens CCAAT/enhancer binding ... 30 9.9
>Y12490-1|CAA73095.1| 1979|Homo sapiens Golgi-associated
microtubule-binding protein protein.
Length = 1979
Score = 30.7 bits (66), Expect = 7.5
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +1
Query: 196 VRKQDKTVEDDDTLKK--LNKLVLDEKNVIDSRTQMEIRNVELAFKILLGSISNKYLQKT 369
++ K +ED + K L L +K + + R Q E N L K LQKT
Sbjct: 912 IKHHQKIIEDQNQSKMQLLQSLQEQKKEMDEFRYQHEQMNATHTQLFLEKDEEIKSLQKT 971
Query: 370 VGELKTELH 396
+ ++KT+LH
Sbjct: 972 IEQIKTQLH 980
>BX641024-1|CAE46015.1| 1694|Homo sapiens hypothetical protein
protein.
Length = 1694
Score = 30.7 bits (66), Expect = 7.5
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +1
Query: 196 VRKQDKTVEDDDTLKK--LNKLVLDEKNVIDSRTQMEIRNVELAFKILLGSISNKYLQKT 369
++ K +ED + K L L +K + + R Q E N L K LQKT
Sbjct: 627 IKHHQKIIEDQNQSKMQLLQSLQEQKKEMDEFRYQHEQMNATHTQLFLEKDEEIKSLQKT 686
Query: 370 VGELKTELH 396
+ ++KT+LH
Sbjct: 687 IEQIKTQLH 695
>AF007217-1|AAD09135.1| 1978|Homo sapiens Trip230 protein.
Length = 1978
Score = 30.7 bits (66), Expect = 7.5
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +1
Query: 196 VRKQDKTVEDDDTLKK--LNKLVLDEKNVIDSRTQMEIRNVELAFKILLGSISNKYLQKT 369
++ K +ED + K L L +K + + R Q E N L K LQKT
Sbjct: 912 IKHHQKIIEDQNQSKMQLLQSLQEQKKEMDEFRYQHEQMNATHTQLFLEKDEEIKSLQKT 971
Query: 370 VGELKTELH 396
+ ++KT+LH
Sbjct: 972 IEQIKTQLH 980
>X52560-1|CAA36794.1| 345|Homo sapiens protein ( Human gene for
nuclear factor NF-IL6. ).
Length = 345
Score = 30.3 bits (65), Expect = 9.9
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +1
Query: 178 PRTKRPVRKQDKTVEDDDTLKKLNKLVLDEKNVI---DSRTQMEIRNVELAFKILLGSIS 348
P + K KTV+ K+ + E+N I SR + ++RN+E K+L +
Sbjct: 254 PAPSQVKSKAKKTVDKHSDEYKIRR----ERNNIAVRKSRDKAKMRNLETQHKVLELTAE 309
Query: 349 NKYLQKTVGELKTEL 393
N+ LQK V +L EL
Sbjct: 310 NERLQKKVEQLSREL 324
>BC021931-1|AAH21931.1| 345|Homo sapiens CCAAT/enhancer binding
protein (C/EBP), beta protein.
Length = 345
Score = 30.3 bits (65), Expect = 9.9
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +1
Query: 178 PRTKRPVRKQDKTVEDDDTLKKLNKLVLDEKNVI---DSRTQMEIRNVELAFKILLGSIS 348
P + K KTV+ K+ + E+N I SR + ++RN+E K+L +
Sbjct: 254 PAPSQVKSKAKKTVDKHSDEYKIRR----ERNNIAVRKSRDKAKMRNLETQHKVLELTAE 309
Query: 349 NKYLQKTVGELKTEL 393
N+ LQK V +L EL
Sbjct: 310 NERLQKKVEQLSREL 324
>BC007538-1|AAH07538.1| 345|Homo sapiens CCAAT/enhancer binding
protein (C/EBP), beta protein.
Length = 345
Score = 30.3 bits (65), Expect = 9.9
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +1
Query: 178 PRTKRPVRKQDKTVEDDDTLKKLNKLVLDEKNVI---DSRTQMEIRNVELAFKILLGSIS 348
P + K KTV+ K+ + E+N I SR + ++RN+E K+L +
Sbjct: 254 PAPSQVKSKAKKTVDKHSDEYKIRR----ERNNIAVRKSRDKAKMRNLETQHKVLELTAE 309
Query: 349 NKYLQKTVGELKTEL 393
N+ LQK V +L EL
Sbjct: 310 NERLQKKVEQLSREL 324
>BC005132-1|AAH05132.2| 137|Homo sapiens CEBPB protein protein.
Length = 137
Score = 30.3 bits (65), Expect = 9.9
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +1
Query: 178 PRTKRPVRKQDKTVEDDDTLKKLNKLVLDEKNVI---DSRTQMEIRNVELAFKILLGSIS 348
P + K KTV+ K+ + E+N I SR + ++RN+E K+L +
Sbjct: 46 PAPSQVKSKAKKTVDKHSDEYKIRR----ERNNIAVRKSRDKAKMRNLETQHKVLELTAE 101
Query: 349 NKYLQKTVGELKTEL 393
N+ LQK V +L EL
Sbjct: 102 NERLQKKVEQLSREL 116
>AY193834-1|AAN86350.1| 345|Homo sapiens CCAAT/enhancer binding
protein (C/EBP), beta protein.
Length = 345
Score = 30.3 bits (65), Expect = 9.9
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +1
Query: 178 PRTKRPVRKQDKTVEDDDTLKKLNKLVLDEKNVI---DSRTQMEIRNVELAFKILLGSIS 348
P + K KTV+ K+ + E+N I SR + ++RN+E K+L +
Sbjct: 254 PAPSQVKSKAKKTVDKHSDEYKIRR----ERNNIAVRKSRDKAKMRNLETQHKVLELTAE 309
Query: 349 NKYLQKTVGELKTEL 393
N+ LQK V +L EL
Sbjct: 310 NERLQKKVEQLSREL 324
>AL161937-1|CAC14276.1| 345|Homo sapiens CCAAT/enhancer binding
protein (C/EBP), beta protein.
Length = 345
Score = 30.3 bits (65), Expect = 9.9
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +1
Query: 178 PRTKRPVRKQDKTVEDDDTLKKLNKLVLDEKNVI---DSRTQMEIRNVELAFKILLGSIS 348
P + K KTV+ K+ + E+N I SR + ++RN+E K+L +
Sbjct: 254 PAPSQVKSKAKKTVDKHSDEYKIRR----ERNNIAVRKSRDKAKMRNLETQHKVLELTAE 309
Query: 349 NKYLQKTVGELKTEL 393
N+ LQK V +L EL
Sbjct: 310 NERLQKKVEQLSREL 324
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,196,356
Number of Sequences: 237096
Number of extensions: 1308179
Number of successful extensions: 2196
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2196
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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