Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_I22
(873 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 25 0.59
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 25 0.59
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 25 0.59
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 25 0.59
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 25 0.59
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 25 0.59
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 25 0.59
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 24 1.8
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 23 2.4
U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. 22 5.5
AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain tran... 22 5.5
AM292371-1|CAL23183.2| 350|Tribolium castaneum gustatory recept... 22 7.2
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 9.6
AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein. 21 9.6
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.4 bits (53), Expect = 0.59
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 254 MDKSRLRQSTVHSNEIGERQRSQRTGYES 340
M + L QSTV++N +RQR+ T Y++
Sbjct: 204 MKRVHLGQSTVNANGETKRQRTSYTRYQT 232
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.4 bits (53), Expect = 0.59
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 254 MDKSRLRQSTVHSNEIGERQRSQRTGYES 340
M + L QSTV++N +RQR+ T Y++
Sbjct: 204 MKRVHLGQSTVNANGETKRQRTSYTRYQT 232
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.4 bits (53), Expect = 0.59
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 254 MDKSRLRQSTVHSNEIGERQRSQRTGYES 340
M + L QSTV++N +RQR+ T Y++
Sbjct: 204 MKRVHLGQSTVNANGETKRQRTSYTRYQT 232
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 25.4 bits (53), Expect = 0.59
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 254 MDKSRLRQSTVHSNEIGERQRSQRTGYES 340
M + L QSTV++N +RQR+ T Y++
Sbjct: 204 MKRVHLGQSTVNANGETKRQRTSYTRYQT 232
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 25.4 bits (53), Expect = 0.59
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 254 MDKSRLRQSTVHSNEIGERQRSQRTGYES 340
M + L QSTV++N +RQR+ T Y++
Sbjct: 160 MKRVHLGQSTVNANGETKRQRTSYTRYQT 188
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 25.4 bits (53), Expect = 0.59
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 254 MDKSRLRQSTVHSNEIGERQRSQRTGYES 340
M + L QSTV++N +RQR+ T Y++
Sbjct: 204 MKRVHLGQSTVNANGETKRQRTSYTRYQT 232
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 25.4 bits (53), Expect = 0.59
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 254 MDKSRLRQSTVHSNEIGERQRSQRTGYES 340
M + L QSTV++N +RQR+ T Y++
Sbjct: 204 MKRVHLGQSTVNANGETKRQRTSYTRYQT 232
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 23.8 bits (49), Expect = 1.8
Identities = 15/47 (31%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
Frame = -3
Query: 508 LSRHETASSSHRVANVLAVP---AASKAHTGPAGGATHRPAHSGGGT 377
L H A + R + VP + GPA H PAH GT
Sbjct: 303 LHDHRPALAQQRRVAAVQVPQLAGGGRRGPGPARSRRHLPAHLVAGT 349
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 23.4 bits (48), Expect = 2.4
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +3
Query: 78 INNWCA*KRQFARFGN*INEQRSYFVLRLSRTLCGGVCIWTQLEM 212
+NN A A+ G IN + Y+V L+ T+ G + I + M
Sbjct: 112 VNNVAALDETLAKLGQYINYETDYYVC-LAMTITGPLVIIGNIAM 155
>U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein.
Length = 322
Score = 22.2 bits (45), Expect = 5.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 245 SDCMDKSRLRQSTVHSNEIGERQRSQRTGYES 340
SDC Q+ H+NE+ R + + YES
Sbjct: 27 SDCDKNQNTEQNYTHNNEMYHRVKEEPI-YES 57
>AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain
transcription factor Fushitarazu protein.
Length = 290
Score = 22.2 bits (45), Expect = 5.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 245 SDCMDKSRLRQSTVHSNEIGERQRSQRTGYES 340
SDC Q+ H+NE+ R + + YES
Sbjct: 27 SDCDKNQNTEQNYTHNNEMYHRVKEEPI-YES 57
>AM292371-1|CAL23183.2| 350|Tribolium castaneum gustatory receptor
candidate 50 protein.
Length = 350
Score = 21.8 bits (44), Expect = 7.2
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -1
Query: 579 NLNHIFLISKLFSKLP 532
++N + LISK+F+ LP
Sbjct: 6 SINSLVLISKIFALLP 21
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.4 bits (43), Expect = 9.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 254 MDKSRLRQSTVHSNEIGERQRSQ 322
M + L QSTV++N +RQR++
Sbjct: 204 MKRVHLGQSTVNANGETKRQRTR 226
>AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein.
Length = 301
Score = 21.4 bits (43), Expect = 9.6
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +1
Query: 382 HRRCVQGGAWPRRQDQCAPL 441
+R C +WP R + AP+
Sbjct: 28 YRDCTTASSWPGRPPKRAPV 47
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,073
Number of Sequences: 336
Number of extensions: 5018
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24099889
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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