Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_I21
(874 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 38 0.011
SB_8844| Best HMM Match : WD40 (HMM E-Value=2.5e-28) 32 0.70
SB_51044| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 30 2.1
SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098) 30 2.1
SB_11157| Best HMM Match : NUC173 (HMM E-Value=9.2e-39) 30 2.1
SB_40462| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_30907| Best HMM Match : THAP (HMM E-Value=0.0033) 29 3.8
SB_22229| Best HMM Match : Arm (HMM E-Value=0) 29 3.8
SB_18989| Best HMM Match : TLP-20 (HMM E-Value=1.9) 29 3.8
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 29 3.8
SB_28905| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_53649| Best HMM Match : FKBP_C (HMM E-Value=4.1e-05) 29 5.0
SB_22944| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_56562| Best HMM Match : Lipase_GDSL (HMM E-Value=0.25) 29 5.0
SB_20837| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_18508| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_36051| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_31087| Best HMM Match : Ldl_recept_a (HMM E-Value=4.2e-32) 29 6.6
SB_5797| Best HMM Match : PH (HMM E-Value=3.7e-37) 29 6.6
SB_56504| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_32857| Best HMM Match : TolA (HMM E-Value=1.1) 28 8.7
SB_12397| Best HMM Match : Extensin_2 (HMM E-Value=0.14) 28 8.7
SB_5718| Best HMM Match : CXC (HMM E-Value=0.59) 28 8.7
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 37.9 bits (84), Expect = 0.011
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Frame = +3
Query: 363 PLSSSTIKMKP-VTLCRSTRTHSTSPCTS--HAPKPAPSSGQQSLSPKLTSQRRIATPSA 533
P ++ KP T R+T+ H+T PCT+ H KP P++ Q+ P T R P+
Sbjct: 106 PHTNKPYTTKPRTTKPRTTKPHTTKPCTTKPHTTKP-PTTKPQTTKPHTTKPRTTKPPTT 164
Query: 534 KRQNNNIQCSKTVGCKLECNTRPGSVSSVKP 626
K +K K T+P ++ P
Sbjct: 165 KPHTTKPHTTKPHTTKPH-TTKPHNIDPTLP 194
>SB_8844| Best HMM Match : WD40 (HMM E-Value=2.5e-28)
Length = 539
Score = 31.9 bits (69), Expect = 0.70
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +2
Query: 164 ENRYNAEKMKNSGIKA---LLRPLMKMIKKTTKRVPAKAIDTCHEDAQNSSNELLERK 328
E R A+K KNSGIK L P+ +TT+ + I TCH+ + + + ++K
Sbjct: 251 EGRSLAKKAKNSGIKVEELKLTPITDFAAETTRNSDWENIVTCHQGNKQARSWWFQKK 308
>SB_51044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 31.5 bits (68), Expect = 0.93
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 423 HSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATP 527
H SP TS +P P+PSS S S +S ++P
Sbjct: 566 HHASPSTSPSPSPSPSSSSSSSSSSSSSSSSSSSP 600
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +3
Query: 369 SSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKL-TSQRRIATPSAKRQN 545
++ T P T + T++T P T+ KP ++ + +P T+ AT + +
Sbjct: 48 TTPTTTTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKPT 107
Query: 546 NNIQCSKTVGCKLECNTRPGSVSSVKP 626
+ T K T PG+ + KP
Sbjct: 108 TTTPPATTTPTKPTTTTPPGTTTPTKP 134
Score = 28.7 bits (61), Expect = 6.6
Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 1/84 (1%)
Frame = +3
Query: 378 TIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSP-KLTSQRRIATPSAKRQNNNI 554
T P T +T T +T P T+ KP ++ + +P K T+ T + +
Sbjct: 79 TTTTPPATTTPTTPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPGTTTPTKPTTTT 138
Query: 555 QCSKTVGCKLECNTRPGSVSSVKP 626
+ T K T P + + KP
Sbjct: 139 PPATTTPTKPTTTTPPATTTPTKP 162
>SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098)
Length = 620
Score = 30.3 bits (65), Expect = 2.1
Identities = 32/119 (26%), Positives = 51/119 (42%)
Frame = +3
Query: 315 YWNARSTKRWKRASPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSP 494
Y+ + T S PL+S + P L S+ S+SP TS +P + SS S SP
Sbjct: 168 YFPSPLTSSSPLTSSSPLTSPSPLTSPSPLTSSSPLTSSSPLTSSSPLTS-SSPLTSSSP 226
Query: 495 KLTSQRRIATPSAKRQNNNIQCSKTVGCKLECNTRPGSVSSVKPVNVLWFLQPSVMLAL 671
LTS + + S ++ + S + T P ++S P+ L ++L L
Sbjct: 227 -LTSPSPLTSSSPLTSSSPLTSSSPLTSSSPL-TSPSPLTSPSPLTXXXXLHLRLLLHL 283
>SB_11157| Best HMM Match : NUC173 (HMM E-Value=9.2e-39)
Length = 1060
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +3
Query: 363 PLSSSTIKMK-PVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATP 527
P ++ST + P T C T + CT H P + +P+ TS I TP
Sbjct: 761 PQTTSTHHITTPQTTCTHHLTTPETTCTHHISTPQTTGTHHITTPQTTSTHHITTP 816
Score = 29.1 bits (62), Expect = 5.0
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = +3
Query: 363 PLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATP 527
P++SST P T T + CT H P +S +P+ TS I TP
Sbjct: 722 PITSST----PQTTSTHHITTPQTTCTHHLTTPETTSTHHISAPQTTSTHHITTP 772
>SB_40462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1580
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 232 DDQEDNETGSRQGDRHVPRGRTELEQRAIGTQDLRRDGSVPVRCRFPRLQSR 387
+D DNET +Q +P EQR + DL+ ++P+ R P+ +SR
Sbjct: 1155 NDSCDNETTLKQPPTKIPVFSEIPEQRLLKLADLQNGPALPLPSRKPQSRSR 1206
>SB_30907| Best HMM Match : THAP (HMM E-Value=0.0033)
Length = 892
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = +2
Query: 107 NMSTYANNEYIIATNNSINENRYNAEKMKNSGIKALLRPLMKMIKKTTKRVPAKAIDTCH 286
N++ + ++ + N N +N S + ALLR L K R+PA+ + C
Sbjct: 426 NIAAIGDLSHLNFLTRAANNNYFNLTVTSQSKVLALLRKLTKTKATGLDRIPARILRECS 485
Query: 287 E 289
+
Sbjct: 486 D 486
>SB_22229| Best HMM Match : Arm (HMM E-Value=0)
Length = 1050
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 176 NAEKMKNSGIKALLRPLMKMIKKTTKRVPAKAI 274
N E ++N+G+ +LLRPL+ I T ++ A A+
Sbjct: 31 NIETLQNAGVMSLLRPLLLDIVPTIQQTAALAL 63
>SB_18989| Best HMM Match : TLP-20 (HMM E-Value=1.9)
Length = 487
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +3
Query: 354 SPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATPSA 533
SP+P ++T +K T R+ TH S T P + Q + K SQR + + A
Sbjct: 255 SPLPPQTTTPMLKFKTFLRADYTHELS--TPEKNSPIKPNTQTPMLGKKVSQRSLPSEPA 312
Query: 534 KRQNNNI 554
+N+
Sbjct: 313 SESPDNV 319
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 229 EDDQEDNETGSRQGDRHVPRGRTELEQRAIGTQ 327
E+ ++ NE + GD +P RTE++ R G++
Sbjct: 3548 EETEDVNENRIKPGDEKIPSMRTEIKSRVTGSE 3580
>SB_28905| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 322
Score = 29.5 bits (63), Expect = 3.8
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = -2
Query: 681 CELLKLTSQTVAETKGHSLVSRKT-LILVACCIQACTQRSWSTGCCCSAAWHSV*QCAVA 505
C ++ + V T +SR +L A I +C + +T CC A + Q A
Sbjct: 157 CVIVIMWLFMVMVTSSQYFISRSVCFLLTAITIGSCV--AMTTACCTKALYTIRQQKAAI 214
Query: 504 KSASGLETAVQ 472
KSASG + VQ
Sbjct: 215 KSASGPTSQVQ 225
>SB_53649| Best HMM Match : FKBP_C (HMM E-Value=4.1e-05)
Length = 639
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +3
Query: 369 SSSTIKMKPVTLCRSTRTHST-SPCTSHAPKPAPSSGQQSLS-PKLTSQ 509
S+ IK K + S + T SP T P P+PS G L P +T++
Sbjct: 305 SAKVIKFKDGSTSESLNSSRTESPVTIQEPSPSPSPGASGLGLPNITAE 353
>SB_22944| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2468
Score = 29.1 bits (62), Expect = 5.0
Identities = 18/80 (22%), Positives = 34/80 (42%)
Frame = +3
Query: 342 WKRASPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIA 521
++R + + + IK L T +P ++HAP PA S + L+ + ++
Sbjct: 474 FERFAKIIQGQTDIKNNANVLASKATTTEVTPSSAHAPGPAESRERSKLT-RSPKEKGGK 532
Query: 522 TPSAKRQNNNIQCSKTVGCK 581
P K+ + + KT K
Sbjct: 533 DPKIKKDGHTLAECKTFAAK 552
>SB_56562| Best HMM Match : Lipase_GDSL (HMM E-Value=0.25)
Length = 473
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +3
Query: 408 RSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATPSAKR 539
R +HS + C+ PK PSSG P L ++ A R
Sbjct: 216 RCGASHSANLCSKSGPKVTPSSGMDGGGPSLPARALAGKSGAPR 259
>SB_20837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1304
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = +3
Query: 354 SPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATPSA 533
S V S++ + P ++ ST + + +P PSS +++ S ATPSA
Sbjct: 1163 STVQASTTIYSLPPTSMLNSTPATVSIDSIAPSPTTPPSSSSTTITTLNASVMATATPSA 1222
Query: 534 KRQNN 548
+ N
Sbjct: 1223 SLEAN 1227
>SB_18508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 709
Score = 28.7 bits (61), Expect = 6.6
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +3
Query: 351 ASPVPLSSSTIKMKPVTLCRSTRTHSTSPC--TSHAPKPAPSSGQQSLSPKLTSQRRIAT 524
+S P S S + + + RST +H SP T H+ + PS +QS T +T
Sbjct: 480 SSDTPSSQSALSNQTMHSNRSTPSHQKSPSNQTMHSNRSTPS--KQSSPSNQTMHSNRST 537
Query: 525 PSAKRQNNN 551
PS + +N
Sbjct: 538 PSNQSTPSN 546
>SB_36051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/62 (27%), Positives = 26/62 (41%)
Frame = +3
Query: 342 WKRASPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIA 521
W P PL + T+K K +T + S SP A P+P+ + + R A
Sbjct: 38 WDMTKP-PLRTKTLKTKAMTENAQQKRKSASPKQEVARTPSPAKASPRRDSPVQASPRNA 96
Query: 522 TP 527
+P
Sbjct: 97 SP 98
>SB_31087| Best HMM Match : Ldl_recept_a (HMM E-Value=4.2e-32)
Length = 1039
Score = 28.7 bits (61), Expect = 6.6
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
Frame = +3
Query: 324 ARSTKRWKRASP-VPLSSSTIKMKP-VTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPK 497
A ST ++P VP I K + +C S S SP S P+S +++P
Sbjct: 283 AVSTANVNTSTPQVPTDDIKILTKSEIEICPSGSIRSASPFIS------PNSRTTTVAPF 336
Query: 498 LTSQRRIATPSAKRQNNNIQCSKTVGCKLECNTRP 602
+ + A N+N S+ GC L +RP
Sbjct: 337 KNVETELHQKDASSDNDNESASRIGGCVLRTVSRP 371
>SB_5797| Best HMM Match : PH (HMM E-Value=3.7e-37)
Length = 1481
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +2
Query: 98 NIINMSTYANNEYIIATNNSINENRYNAEKMKNS 199
N N+++Y NN N N N YN KNS
Sbjct: 293 NRYNLNSYNNNNNTYNINTYNNNNTYNVNSYKNS 326
>SB_56504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 292
Score = 28.3 bits (60), Expect = 8.7
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +3
Query: 339 RWKRASPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSP-KLTSQRR 515
R KR + +P+ S ++ R R+ S S S +P+P SLSP KL
Sbjct: 79 RKKRNTLIPIKESDTSLQKK---RKVRSCSPSSSRSPSPRPTRKPEHSSLSPAKLGKGTS 135
Query: 516 IATPSAKRQNNNIQCSKTVGCK 581
+PS+ + + + TV K
Sbjct: 136 KLSPSSPKVLSKVSDQDTVKSK 157
>SB_32857| Best HMM Match : TolA (HMM E-Value=1.1)
Length = 448
Score = 28.3 bits (60), Expect = 8.7
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +1
Query: 127 QRIYHRDKQLD*RKQIQR*KDEE*RH*GATAAAYEDDQEDNETGSRQGDRHVPRGRTELE 306
+R R+K+ + R +R +EE RH E+D+ D E ++ DRH E E
Sbjct: 191 RRDEERNKKDEDRHDKERSNEEENRH-DEKRNNEEEDRHDEERNNKDEDRHDEERNNEDE 249
Query: 307 QR 312
R
Sbjct: 250 DR 251
>SB_12397| Best HMM Match : Extensin_2 (HMM E-Value=0.14)
Length = 659
Score = 28.3 bits (60), Expect = 8.7
Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 7/91 (7%)
Frame = +3
Query: 375 STIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQS---LSPKLTSQRRIATPSAKRQN 545
STI +P T T ST P TS A S+ Q + P ++Q + ++ +
Sbjct: 65 STILTQPQTSSAICHTTSTQPHTSSAVGHTTSTKPQKSSPIGPTTSTQPQTSSTVGHTTS 124
Query: 546 NNIQCSKTVG----CKLECNTRPGSVSSVKP 626
Q S TVG K + ++ G +S KP
Sbjct: 125 TQPQTSSTVGHTTSTKPQTSSPIGHTTSTKP 155
>SB_5718| Best HMM Match : CXC (HMM E-Value=0.59)
Length = 492
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -2
Query: 669 KLTSQTVAETKGHSLVSRKTLILVACCIQACTQRSW 562
+L ++ + T V + T +L+ACC CT W
Sbjct: 157 QLFTEMLQVTTSFKFVKKNTFLLLACCYGKCTGFLW 192
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,757,820
Number of Sequences: 59808
Number of extensions: 488790
Number of successful extensions: 2043
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2010
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2503194881
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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