Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_I21
(874 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80847-1|AAB37983.2| 738|Caenorhabditis elegans Hypothetical pr... 33 0.35
AL031627-8|CAA20960.2| 222|Caenorhabditis elegans Hypothetical ... 31 0.81
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 31 1.1
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 31 1.1
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 31 1.1
U41533-10|AAA83172.1| 491|Caenorhabditis elegans Hypothetical p... 31 1.1
U41533-8|AAA83171.2| 588|Caenorhabditis elegans Hypothetical pr... 31 1.1
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 31 1.4
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 31 1.4
U41109-1|ABC48251.1| 248|Caenorhabditis elegans Hypothetical pr... 30 1.9
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 30 1.9
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 30 2.5
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 3.3
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 3.3
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 29 3.3
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z83244-5|CAB54315.1| 568|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81507-4|CAL49434.1| 598|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z75534-1|CAH04713.2| 326|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z69385-8|CAA93423.1| 529|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical pr... 29 4.3
U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein. 29 4.3
U13642-4|AAG00043.2| 687|Caenorhabditis elegans Hypothetical pr... 29 4.3
DQ523832-1|ABF71877.1| 598|Caenorhabditis elegans P21-activated... 29 4.3
AL032639-12|CAL49443.1| 598|Caenorhabditis elegans Hypothetical... 29 4.3
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 29 5.7
Z81099-3|CAB03186.3| 490|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical pr... 28 7.6
U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore co... 28 7.6
DQ178246-1|ABA18185.1| 482|Caenorhabditis elegans TPX2-related ... 28 7.6
DQ178245-1|ABA18184.1| 507|Caenorhabditis elegans TPX2-related ... 28 7.6
AC025716-4|AAL32238.1| 482|Caenorhabditis elegans Tpx2 (targeti... 28 7.6
AC025716-2|AAK39617.1| 507|Caenorhabditis elegans Tpx2 (targeti... 28 7.6
>U80847-1|AAB37983.2| 738|Caenorhabditis elegans Hypothetical
protein C17H11.2 protein.
Length = 738
Score = 32.7 bits (71), Expect = 0.35
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +3
Query: 390 KPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATPSAKRQNNNIQCSK 566
+PV+ R CT+ + KP + ++L K + ++ + TP+ K +++ C K
Sbjct: 680 QPVSRSDVQRVFGVGVCTNQSNKPCADAAGEALLEKTSKEQDVETPAEKMKDDKDGCDK 738
>AL031627-8|CAA20960.2| 222|Caenorhabditis elegans Hypothetical
protein Y102A5C.17 protein.
Length = 222
Score = 31.5 bits (68), Expect = 0.81
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +3
Query: 378 TIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATPSAKRQNNNIQ 557
T +++ T +T T +T+ T+ P P P+ +Q P T R+ S R N +
Sbjct: 44 TQQVETTTTTTTTTTTTTTSTTTTTPIPCPTDWEQFERPSGTWCIRVFVGSGPRSNADSM 103
Query: 558 CS 563
CS
Sbjct: 104 CS 105
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/68 (35%), Positives = 34/68 (50%)
Frame = +3
Query: 324 ARSTKRWKRASPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLT 503
A ST +S VP SSS +P + + T ST+P + + P+PS S +P +
Sbjct: 371 ASSTATPGSSSTVPSSSSP---QPSSQSPAPNTGSTTPSQTSSQSPSPSMNPSSSTPTGS 427
Query: 504 SQRRIATP 527
SQ I TP
Sbjct: 428 SQSTI-TP 434
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/68 (35%), Positives = 34/68 (50%)
Frame = +3
Query: 324 ARSTKRWKRASPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLT 503
A ST +S VP SSS +P + + T ST+P + + P+PS S +P +
Sbjct: 578 ASSTATPGSSSTVPSSSSP---QPSSQSPAPNTGSTTPSQTSSQSPSPSMNPSSSTPTGS 634
Query: 504 SQRRIATP 527
SQ I TP
Sbjct: 635 SQSTI-TP 641
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/68 (35%), Positives = 34/68 (50%)
Frame = +3
Query: 324 ARSTKRWKRASPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLT 503
A ST +S VP SSS +P + + T ST+P + + P+PS S +P +
Sbjct: 578 ASSTATPGSSSTVPSSSSP---QPSSQSPAPNTGSTTPSQTSSQSPSPSMNPSSSTPTGS 634
Query: 504 SQRRIATP 527
SQ I TP
Sbjct: 635 SQSTI-TP 641
Score = 28.3 bits (60), Expect = 7.6
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
Frame = +3
Query: 354 SPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATP-- 527
SPV S++ P T ST + T + + + S G + S ++TSQ TP
Sbjct: 877 SPVESSTTPSPGSPGTTLTSTSPSPSQSTTIGSTQGSTSPGISTTSEEMTSQGSTQTPGS 936
Query: 528 --SAKRQNNNIQCSKTVGCKLECNTRPGSVSSV 620
S Q + + S + G + + GS S +
Sbjct: 937 TGSTVTQPSTVSDSTSSGSTVTVGSTEGSSSPI 969
>U41533-10|AAA83172.1| 491|Caenorhabditis elegans Hypothetical
protein R05F9.1a protein.
Length = 491
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +3
Query: 408 RSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATPSAKRQNNNIQCSKTVGCKL 584
RS T +P H+ K GQ+S+S + + + RQ N + CS G K+
Sbjct: 79 RSLTTPPLAPALKHSAKDGHYRGQRSMSLGGPAHEMLMSQLGGRQGNTVDCSPGEGDKV 137
>U41533-8|AAA83171.2| 588|Caenorhabditis elegans Hypothetical
protein R05F9.1b protein.
Length = 588
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +3
Query: 408 RSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATPSAKRQNNNIQCSKTVGCKL 584
RS T +P H+ K GQ+S+S + + + RQ N + CS G K+
Sbjct: 176 RSLTTPPLAPALKHSAKDGHYRGQRSMSLGGPAHEMLMSQLGGRQGNTVDCSPGEGDKV 234
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +3
Query: 324 ARSTKRWKRASPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKL 500
A ST ++ S++ VT + + +TSP TS P+P P++ L+P L
Sbjct: 287 ATSTSTSTASTTTTTPSTSTHTTTVTYSTNATSSTTSPTTSPTPEPEPTTTATVLAPTL 345
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +3
Query: 324 ARSTKRWKRASPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKL 500
A ST ++ S++ VT + + +TSP TS P+P P++ L+P L
Sbjct: 269 ATSTSTSTASTTTTTPSTSTHTTTVTYSTNATSSTTSPTTSPTPEPEPTTTATVLAPTL 327
>U41109-1|ABC48251.1| 248|Caenorhabditis elegans Hypothetical
protein F52E1.5 protein.
Length = 248
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 366 LSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATP 527
LSSST KP+T +T +T+ T+ APS+ ++ K+T + +TP
Sbjct: 74 LSSSTTSPKPITTTETTTRSTTTTTTTTTTTAAPSTTTSTV--KITPKPLRSTP 125
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +3
Query: 354 SPVPLSS--STIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSS 473
SP P SS ST + PV+ C S+R S S +P P P++
Sbjct: 1416 SPPPSSSRFSTPPVSPVSSCPSSRFSSPSATRPQSPDPVPAA 1457
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
C46C2.1b protein.
Length = 1677
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 9/79 (11%)
Frame = +3
Query: 423 HSTSPCTSHA--PKPAPSSGQQSLSPKLTSQRRIATPSAKRQNNNIQCSKTVGCKLECNT 596
+ST P T A PK + ++ + PK+ ++ T A ++ NN+Q + E N
Sbjct: 1035 NSTEPPTITAVMPKDSSAATASNTKPKIEIEKTPPTRDASQEPNNVQVTNVRKVSQESNA 1094
Query: 597 -------RPGSVSSVKPVN 632
RPG + + P N
Sbjct: 1095 ESVQSIPRPGGIIVMSPTN 1113
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
C46C2.1a protein.
Length = 1838
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 9/79 (11%)
Frame = +3
Query: 423 HSTSPCTSHA--PKPAPSSGQQSLSPKLTSQRRIATPSAKRQNNNIQCSKTVGCKLECNT 596
+ST P T A PK + ++ + PK+ ++ T A ++ NN+Q + E N
Sbjct: 1035 NSTEPPTITAVMPKDSSAATASNTKPKIEIEKTPPTRDASQEPNNVQVTNVRKVSQESNA 1094
Query: 597 -------RPGSVSSVKPVN 632
RPG + + P N
Sbjct: 1095 ESVQSIPRPGGIIVMSPTN 1113
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Frame = +3
Query: 318 WNARSTKRWKRASP--VPLSSSTIKMK-PVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSL 488
WN +++K + P P+ S P TR S + P P PSSG + +
Sbjct: 527 WNQTPVRQYKPSFPSSAPIGSGASSYSTPAAPPPPTRVESHGLAPARPPPPPPSSGTRGI 586
Query: 489 SP 494
+P
Sbjct: 587 AP 588
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Frame = +3
Query: 318 WNARSTKRWKRASP--VPLSSSTIKMK-PVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSL 488
WN +++K + P P+ S P TR S + P P PSSG + +
Sbjct: 353 WNQTPVRQYKPSFPSSAPIGSGASSYSTPAAPPPPTRVESHGLAPARPPPPPPSSGTRGI 412
Query: 489 SP 494
+P
Sbjct: 413 AP 414
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +3
Query: 357 PVPLSSSTIKMKP--VTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIAT 524
P +SST KP T ST ST+ T+ PKP S+ + + T+ AT
Sbjct: 585 PTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTAT 642
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +3
Query: 357 PVPLSSSTIKMKP--VTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIAT 524
P +SST KP T ST ST+ T+ PKP S+ + + T+ AT
Sbjct: 585 PTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTAT 642
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +3
Query: 324 ARSTKRWKRASP-VPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKL 500
A++T +R SP +S+T KP T +T + T+ AP + +P+
Sbjct: 287 AQTTTTTERMSPSTTKTSTTTTAKPTTTRSTTTQRPQTVATTEAPTTTTVEDVTTRAPRT 346
Query: 501 TSQRRIATPSA 533
+RR A+ S+
Sbjct: 347 ECERRRASASS 357
>Z83244-5|CAB54315.1| 568|Caenorhabditis elegans Hypothetical
protein W06F12.2b protein.
Length = 568
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +1
Query: 139 HRDKQLD*RKQIQR*KDEE*RH*GATAAAYEDDQEDNETGSRQGDRHVPRGRTELEQRA 315
HRD + D + +R +++ R+ E + DNE G R+ + PR R E ++R+
Sbjct: 420 HRDDRRD--RDRERDRNDRDRNREREREERERENRDNERGRRERESEAPRRRKEDDRRS 476
>Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical
protein W06F12.2a protein.
Length = 562
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +1
Query: 139 HRDKQLD*RKQIQR*KDEE*RH*GATAAAYEDDQEDNETGSRQGDRHVPRGRTELEQRA 315
HRD + D + +R +++ R+ E + DNE G R+ + PR R E ++R+
Sbjct: 414 HRDDRRD--RDRERDRNDRDRNREREREERERENRDNERGRRERESEAPRRRKEDDRRS 470
>Z81507-4|CAL49434.1| 598|Caenorhabditis elegans Hypothetical
protein Y38F1A.10a protein.
Length = 598
Score = 29.1 bits (62), Expect = 4.3
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +3
Query: 354 SPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSH-APKPAPSSGQQSLSPKLTSQRRIATPS 530
SP P + + T + T +T+P TS+ AP P P S + PK S+ S
Sbjct: 214 SPFPPQPPVLPQRSKT-ASAVATTTTNPTTSNGAPPPVPGSKGPPVPPK-PSKENSNDKS 271
Query: 531 AKRQNNNIQCSKT 569
+N N +KT
Sbjct: 272 VGDKNGNTTTNKT 284
>Z75534-1|CAH04713.2| 326|Caenorhabditis elegans Hypothetical
protein F08A10.2 protein.
Length = 326
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -2
Query: 192 FIFSALYLFSLIELFVAMIY 133
FIFSA+YLFSL +F +Y
Sbjct: 20 FIFSAIYLFSLFIMFPIYVY 39
>Z69385-8|CAA93423.1| 529|Caenorhabditis elegans Hypothetical
protein ZK593.9 protein.
Length = 529
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 357 PVPLSSSTIKMKPVTLC-RSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIAT 524
P+P+ SST KM+ T+C + P AP P P+ ++ K +R+ T
Sbjct: 399 PIPVDSSTKKMRNDTVCIPPPEVSAVVPPDGWAPIPVPAPTKKPKVSKKEKERKKKT 455
>Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical
protein R10E12.1a protein.
Length = 861
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +3
Query: 381 IKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATPSAKRQNNNIQ 557
+++ V+ + ++ + +P P+PA S + + P T Q ATP A Q N Q
Sbjct: 715 LQLSIVSGTNAAQSPANAPPRPPPPRPAAPSVESPIPPPRTQQSMQATPGAPPQYNPYQ 773
>U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein.
Length = 861
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +3
Query: 381 IKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATPSAKRQNNNIQ 557
+++ V+ + ++ + +P P+PA S + + P T Q ATP A Q N Q
Sbjct: 715 LQLSIVSGTNAAQSPANAPPRPPPPRPAAPSVESPIPPPRTQQSMQATPGAPPQYNPYQ 773
>U13642-4|AAG00043.2| 687|Caenorhabditis elegans Hypothetical
protein ZC395.8 protein.
Length = 687
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +3
Query: 336 KRWKRASPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRR 515
KRW R +S +K P ++ R+ +P + PK A SG + SP RR
Sbjct: 92 KRWGRDPRSVSPTSPVKKTPTDSAKNKRSSVVTPTSPPVPKKA-KSGTSTTSPFAFLNRR 150
>DQ523832-1|ABF71877.1| 598|Caenorhabditis elegans P21-activated
kinase MAX-2 protein.
Length = 598
Score = 29.1 bits (62), Expect = 4.3
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +3
Query: 354 SPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSH-APKPAPSSGQQSLSPKLTSQRRIATPS 530
SP P + + T + T +T+P TS+ AP P P S + PK S+ S
Sbjct: 214 SPFPPQPPVLPQRSKT-ASAVATTTTNPTTSNGAPPPVPGSKGPPVPPK-PSKENSNDKS 271
Query: 531 AKRQNNNIQCSKT 569
+N N +KT
Sbjct: 272 VGDKNGNTTTNKT 284
>AL032639-12|CAL49443.1| 598|Caenorhabditis elegans Hypothetical
protein Y38F1A.10a protein.
Length = 598
Score = 29.1 bits (62), Expect = 4.3
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +3
Query: 354 SPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSH-APKPAPSSGQQSLSPKLTSQRRIATPS 530
SP P + + T + T +T+P TS+ AP P P S + PK S+ S
Sbjct: 214 SPFPPQPPVLPQRSKT-ASAVATTTTNPTTSNGAPPPVPGSKGPPVPPK-PSKENSNDKS 271
Query: 531 AKRQNNNIQCSKT 569
+N N +KT
Sbjct: 272 VGDKNGNTTTNKT 284
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +3
Query: 435 PCTSHAPKPAPSSGQQSLSPKLTSQRRIATPSAKRQNNNI 554
P AP P P SLSP + I PS+ + NI
Sbjct: 24 PSPRRAPPPPPHRKPASLSPPPDDENTIRPPSSSESSENI 63
>Z81099-3|CAB03186.3| 490|Caenorhabditis elegans Hypothetical
protein K08F9.1 protein.
Length = 490
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 345 KRASPVPLSSSTIKMKPVTLCRSTRTHSTSP 437
K SP+ + + ++ + LCRSTR++S P
Sbjct: 459 KNKSPIEVEEAIEELPKLPLCRSTRSNSIKP 489
>Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical
protein R10E12.1d protein.
Length = 498
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 411 STRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATPSAKRQNNNIQ 557
+ ++ + +P P+PA S + + P T Q ATP A Q N Q
Sbjct: 362 AAQSPANAPPRPPPPRPAAPSVESPIPPPRTQQSMQATPGAPPQYNPYQ 410
>Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical
protein R10E12.1b protein.
Length = 882
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 411 STRTHSTSPCTSHAPKPAPSSGQQSLSPKLTSQRRIATPSAKRQNNNIQ 557
+ ++ + +P P+PA S + + P T Q ATP A Q N Q
Sbjct: 746 AAQSPANAPPRPPPPRPAAPSVESPIPPPRTQQSMQATPGAPPQYNPYQ 794
>U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore
complex protein protein11 protein.
Length = 805
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 363 PLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQSLSPKLTS 506
P +++T+ P T+ + +T+ TS PKPA ++ L LTS
Sbjct: 507 PATAATLGQTPSTVSATPSLPTTTSTTSTLPKPAEATPTLGLGLGLTS 554
>DQ178246-1|ABA18185.1| 482|Caenorhabditis elegans TPX2-related
alternative variant b protein.
Length = 482
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +3
Query: 327 RSTKRWKRASPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQS 485
RS K +P +S T K++P+ + + P PAP+ QQ+
Sbjct: 307 RSASANKATAPTSVSKLTPKIRPIATANRSSILRMNVVKPTVPAPAPADAQQN 359
>DQ178245-1|ABA18184.1| 507|Caenorhabditis elegans TPX2-related
alternative variant a protein.
Length = 507
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +3
Query: 327 RSTKRWKRASPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQS 485
RS K +P +S T K++P+ + + P PAP+ QQ+
Sbjct: 307 RSASANKATAPTSVSKLTPKIRPIATANRSSILRMNVVKPTVPAPAPADAQQN 359
>AC025716-4|AAL32238.1| 482|Caenorhabditis elegans Tpx2 (targeting
protein for xenopusklp2)-like protein 1, isoform b
protein.
Length = 482
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +3
Query: 327 RSTKRWKRASPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQS 485
RS K +P +S T K++P+ + + P PAP+ QQ+
Sbjct: 307 RSASANKATAPTSVSKLTPKIRPIATANRSSILRMNVVKPTVPAPAPADAQQN 359
>AC025716-2|AAK39617.1| 507|Caenorhabditis elegans Tpx2 (targeting
protein for xenopusklp2)-like protein 1, isoform a
protein.
Length = 507
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +3
Query: 327 RSTKRWKRASPVPLSSSTIKMKPVTLCRSTRTHSTSPCTSHAPKPAPSSGQQS 485
RS K +P +S T K++P+ + + P PAP+ QQ+
Sbjct: 307 RSASANKATAPTSVSKLTPKIRPIATANRSSILRMNVVKPTVPAPAPADAQQN 359
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,651,228
Number of Sequences: 27780
Number of extensions: 360606
Number of successful extensions: 1741
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1735
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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