Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_I16
         (894 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1350 - 26312275-26313613,26314833-26315110                       29   5.0  
01_05_0669 - 24152057-24152110,24152224-24152308,24152401-241524...    28   8.7  

>08_02_1350 - 26312275-26313613,26314833-26315110
          Length = 538

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -2

Query: 146 GYDGLSRTNIPKRNTKMLSYCNSFLNAIKIHQNXXRDSHIV 24
           G DG+S + IP R T+    C+S    I   +N   DSH +
Sbjct: 281 GGDGMSSSQIPPRLTQHHGSCSSASAKISCGENDSVDSHSI 321


>01_05_0669 -
           24152057-24152110,24152224-24152308,24152401-24152486,
           24153129-24154341,24154441-24154529,24154607-24154639,
           24154674-24154859,24155290-24155380,24155588-24155622,
           24155736-24155817,24155968-24156020,24156404-24156469,
           24156752-24156820,24156821-24156984,24157925-24158432,
           24158543-24158602
          Length = 957

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 178 VTHWLRWLFY*RDTCDRRIIYNIVLE 255
           + H + W FY   TC++  +YN +LE
Sbjct: 422 LVHCISWTFYYMLTCNKSPLYNFMLE 447


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,123,049
Number of Sequences: 37544
Number of extensions: 194393
Number of successful extensions: 218
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 217
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)