Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_I15
(886 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46796| Best HMM Match : RCC1 (HMM E-Value=3e-14) 81 9e-16
SB_17592| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 3e-14
SB_59432| Best HMM Match : MORN (HMM E-Value=9.3e-26) 76 3e-14
SB_6739| Best HMM Match : RCC1 (HMM E-Value=1.6e-34) 76 3e-14
SB_45009| Best HMM Match : RCC1 (HMM E-Value=7.6e-21) 74 2e-13
SB_25012| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 2e-12
SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 5e-11
SB_7970| Best HMM Match : RCC1 (HMM E-Value=0) 65 6e-11
SB_5067| Best HMM Match : RCC1 (HMM E-Value=4.5e-16) 63 3e-10
SB_20583| Best HMM Match : RCC1 (HMM E-Value=6.2e-08) 62 4e-10
SB_17186| Best HMM Match : RCC1 (HMM E-Value=1.5e-19) 60 3e-09
SB_2363| Best HMM Match : RCC1 (HMM E-Value=0.00041) 60 3e-09
SB_18907| Best HMM Match : RCC1 (HMM E-Value=0) 57 2e-08
SB_55819| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_30518| Best HMM Match : FYVE (HMM E-Value=1.2e-18) 49 6e-06
SB_29134| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 9e-05
SB_32347| Best HMM Match : RCC1 (HMM E-Value=0.00072) 39 0.006
SB_31129| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.058
SB_31780| Best HMM Match : Pkinase (HMM E-Value=0) 35 0.076
SB_34545| Best HMM Match : RCC1 (HMM E-Value=0.027) 33 0.31
SB_22290| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_50916| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_48230| Best HMM Match : DUF152 (HMM E-Value=1.5) 29 5.0
SB_39161| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
>SB_46796| Best HMM Match : RCC1 (HMM E-Value=3e-14)
Length = 350
Score = 81.4 bits (192), Expect = 9e-16
Identities = 44/93 (47%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Frame = +2
Query: 614 RNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTDTGCVYACGDNKSGQCG 793
RN GQLG G T VP+++ LK NI+ A+ GR HTL +TD G V+ GDNK GQ G
Sbjct: 2 RNDKGQLGHGTTERCDVPKVIDRLKMHNIVQASCGRGHTLILTDAGLVFGFGDNKLGQIG 61
Query: 794 LGNTTPQILK-PTRI-NTMEHRXVKVGCGAEFS 886
G+ P L P +I + + + KV CGAEFS
Sbjct: 62 QGHQKPTSLPCPLQIMHPTDKKVTKVCCGAEFS 94
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Frame = +2
Query: 530 RRYRLIVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSV--PELVPELKGKNII 703
+ + ++ + C GH++++++ G + FG N GQ+G G S+ P + K +
Sbjct: 26 KMHNIVQASCGRGHTLILTDAGLVFGFGDNKLGQIGQGHQKPTSLPCPLQIMHPTDKKVT 85
Query: 704 HAAVGRHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQIL 820
G ++ + + G +++ G + GQ G NT Q +
Sbjct: 86 KVCCGAEFSMLLDENGDIFSFGSPEYGQLG-HNTDGQYI 123
Score = 29.9 bits (64), Expect = 2.9
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +2
Query: 557 CTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGK-NIIHAAVGRHHTL 733
C H++ + E+G +T+G G+LG VP L+ K N G +++
Sbjct: 165 CGNNHTMALDEQGRVFTWGFGGYGRLGHQQPKDEHVPRLLTFFNTKGNPSVIFAGSTYSM 224
Query: 734 FVTDTGCVYACGDNK-SGQCGL 796
V G +Y G K SG+ +
Sbjct: 225 AVC-MGQLYFWGQTKQSGEAAM 245
>SB_17592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3592
Score = 76.6 bits (180), Expect = 3e-14
Identities = 43/111 (38%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Frame = +2
Query: 557 CTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLF 736
C A S+ +S G +T+G+ +LG G+ P++V L+GK I+ AVG H L
Sbjct: 1687 CGAQFSLALSTSGLVWTWGKGDYYRLGHGNDTHVRKPQIVDGLRGKKIVDVAVGALHCLA 1746
Query: 737 VTDTGCVYACGDNKSGQCGLGNTTPQILKPTRINTME-HRXVKVGCGAEFS 886
VTD+G V+A GDN GQ G NTT +P +N +E + +V CG+ S
Sbjct: 1747 VTDSGQVFAWGDNDHGQQG-NNTTTVNRRPQLVNGLEGQKITRVACGSSHS 1796
Score = 70.5 bits (165), Expect = 2e-12
Identities = 38/113 (33%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Frame = +2
Query: 557 CTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGR--HHT 730
C HS +++ E YT+G+ G+LG GD+ + +P++V L+G +I A G T
Sbjct: 2526 CGGSHSACITQNHELYTWGKGRYGRLGHGDSEDQLLPKVVEALRGNRVIDVACGSGDAQT 2585
Query: 731 LFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRINTMEHRXV-KVGCGAEFS 886
L +TD CV++ GD G+ G G + + P ++ ++ V KV CG++FS
Sbjct: 2586 LCLTDDDCVWSWGDGDYGKLGRGGSDGCKI-PMKVESLIGLGVSKVECGSQFS 2637
Score = 68.5 bits (160), Expect = 7e-12
Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
Frame = +2
Query: 557 CTAGHSVLVSEEGEAYTFGRNACGQLGFG--DTVTRSVPELVPELKGKNIIHAAVGRHHT 730
C + SV ++ G YT+G+ +LG G D V R P+ V L+GK +I A G H
Sbjct: 2632 CGSQFSVALTRSGAVYTWGKGDYYRLGHGVDDHVRR--PKRVAALQGKKVITIATGSLHC 2689
Query: 731 LFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRINTMEHRXV-KVGCGA 877
+ TDTG VY GDN GQ G G TT I +P + ++ + + +V CG+
Sbjct: 2690 VASTDTGEVYTWGDNDEGQLGDG-TTNAIARPRLVTALQGKKISRVACGS 2738
Score = 67.3 bits (157), Expect = 2e-11
Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Frame = +2
Query: 557 CTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRH--HT 730
C + HS + GE YT+G G+LG GD T P+ V +I A G T
Sbjct: 1581 CGSSHSAAILSSGELYTWGLGEYGRLGHGDNYTHLKPKKVQSFTSHRVIDIACGSRDAQT 1640
Query: 731 LFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRINTMEHRXV-KVGCGAEFS 886
L +TD G V++ GD G+ G G + + P + ++ + V KV CGA+FS
Sbjct: 1641 LALTDDGTVWSWGDGDFGKLGRGGSEGCSV-PNPVEKLQGQGVCKVACGAQFS 1692
Score = 53.6 bits (123), Expect = 2e-07
Identities = 26/104 (25%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Frame = +2
Query: 569 HSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTDT 748
H++ ++ EG+ +++G G+LG G+ + P+L+ K + + G H+ + +
Sbjct: 1533 HAMALTIEGKLFSWGEGEDGKLGHGNRMNCDHPKLIDTFKSSCVRDMSCGSSHSAAILSS 1592
Query: 749 GCVYACGDNKSGQCGLGNTTPQILKPTRINTM-EHRXVKVGCGA 877
G +Y G + G+ G G+ LKP ++ + HR + + CG+
Sbjct: 1593 GELYTWGLGEYGRLGHGDNYTH-LKPKKVQSFTSHRVIDIACGS 1635
Score = 48.4 bits (110), Expect = 8e-06
Identities = 25/55 (45%), Positives = 31/55 (56%)
Frame = +2
Query: 569 HSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTL 733
H V ++ GE YT+G N GQLG G T + P LV L+GK I A G HT+
Sbjct: 2688 HCVASTDTGEVYTWGDNDEGQLGDGTTNAIARPRLVTALQGKKISRVACGSAHTI 2742
Score = 41.9 bits (94), Expect = 7e-04
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
Frame = +2
Query: 581 VSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAV--GRHHTLFVTDTGC 754
V+ EG+ Y G G+LG G T T + +++ L+ + AV G H + ++ G
Sbjct: 2428 VTAEGKVYATGYGHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGD 2487
Query: 755 VYACGDNKSGQCGLGNTTPQILKPTRINTMEHRXV-KVGCGAEFS 886
VY+ G+ G+ G GN +P I + + V + CG S
Sbjct: 2488 VYSWGEGDDGKLGHGNRN-SCDRPRVIEALRGKGVIDISCGGSHS 2531
Score = 40.7 bits (91), Expect = 0.002
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +2
Query: 593 GEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLF-VTDTGCVYACG 769
G Y +G N GQLG + +P+ + L + VG TLF VT G VYA G
Sbjct: 2380 GTIYGWGHNHRGQLGSLEGAKVKLPQTIEALASIRPVQI-VGGEQTLFAVTAEGKVYATG 2438
Query: 770 DNKSGQCGLGNTTPQILKPTRINTMEHRXVK 862
G+ GLG T + + +++H V+
Sbjct: 2439 YGHGGRLGLGG-TDTVTSIKMLESLQHVVVR 2468
Score = 38.7 bits (86), Expect = 0.006
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Frame = +2
Query: 587 EEGE--AYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLF-VTDTGCV 757
+EG+ + +G N QLG VP L E G + G TLF V+ G V
Sbjct: 1430 QEGQIKVFVWGLNDKDQLGGLKGSKIKVPVL-SEFIGALKVQQIAGGSKTLFAVSHDGKV 1488
Query: 758 YACGDNKSGQCGLGNTTPQILKPTRINTMEHRXVK 862
+ACG++ +G+ GLG + + P +I + V+
Sbjct: 1489 FACGESTNGRLGLGPLSANVTVPRQIENLSSFMVR 1523
>SB_59432| Best HMM Match : MORN (HMM E-Value=9.3e-26)
Length = 1362
Score = 76.2 bits (179), Expect = 3e-14
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Frame = +2
Query: 569 HSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTDT 748
H+VL++ E + FG N GQLGFGD R P +P +GK ++ A G H++ + D
Sbjct: 47 HTVLLTFNHEVFAFGDNNFGQLGFGDRNRRRDPAKLPFFEGKRVVDIACGGQHSVVLLDN 106
Query: 749 GCVYACGDNKSGQCGLG--NTTPQILKPTRI 835
G YA GD+ SGQCG+G + + PT++
Sbjct: 107 GETYAWGDSSSGQCGIGKCDNNSAVDAPTKV 137
Score = 39.5 bits (88), Expect = 0.004
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +2
Query: 653 TRSVPELVPELKGKNIIHAAVGRHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTR 832
T P++ P I A+G HT+ +T V+A GDN GQ G G+ + P +
Sbjct: 23 TSPEPKISPLSLPHGISKVALGTAHTVLLTFNHEVFAFGDNNFGQLGFGDRNRR-RDPAK 81
Query: 833 INTME-HRXVKVGCGAEFS 886
+ E R V + CG + S
Sbjct: 82 LPFFEGKRVVDIACGGQHS 100
Score = 38.7 bits (86), Expect = 0.006
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Frame = +2
Query: 539 RLIVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPE------LVPELKG-KN 697
R++ C HSV++ + GE Y +G ++ GQ G G S + PE+K ++
Sbjct: 89 RVVDIACGGQHSVVLLDNGETYAWGDSSSGQCGIGKCDNNSAVDAPTKVAFTPEMKSPQS 148
Query: 698 IIHAAVGRHHTL-FVTDTGC-VYACGD 772
+ H + +H T TD ACGD
Sbjct: 149 VFHLSEEKHETQPQATDVKIKSIACGD 175
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +2
Query: 656 RSVPELVPELKGKNIIHAAVGRHHTLFVT 742
RSVP LV +L II A G H+L +T
Sbjct: 559 RSVPCLVEDLSSTGIIKVAAGTFHSLALT 587
>SB_6739| Best HMM Match : RCC1 (HMM E-Value=1.6e-34)
Length = 1790
Score = 76.2 bits (179), Expect = 3e-14
Identities = 47/119 (39%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Frame = +2
Query: 539 RLIVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVG 718
++I C + HS V+ EGE YT+GR G+LG G + + VP LV L+G +II A G
Sbjct: 596 QVIRISCGSTHSAAVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACG 655
Query: 719 R--HHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRINTMEHRXV-KVGCGAEFS 886
HTL D G V++ GD G+ G G + P I ++ V KV CGA+FS
Sbjct: 656 SGDAHTLAAADDGTVWSWGDGDYGKLGRGG-SDGCKNPKSIERLQGLGVCKVYCGAQFS 713
Score = 70.5 bits (165), Expect = 2e-12
Identities = 36/111 (32%), Positives = 55/111 (49%)
Frame = +2
Query: 545 IVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRH 724
+V+ H + ++ EGE Y++G G+LG GDT R P LV L GK +I + G
Sbjct: 546 VVTHTDGKHFLALTREGEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAGKQVIRISCGST 605
Query: 725 HTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRINTMEHRXVKVGCGA 877
H+ VT G +Y G G+ G G++ Q++ H + V CG+
Sbjct: 606 HSAAVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGS 656
Score = 59.7 bits (138), Expect = 3e-09
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Frame = +2
Query: 557 CTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLF 736
C A S+ ++ +G +T+G+ +LG G P+LV L GK+++ +VG H L
Sbjct: 708 CGAQFSLALTRDGSVWTWGKGEGFRLGHGTEDHVRHPKLVEALDGKHVVDVSVGSIHCLA 767
Query: 737 VTDTGCVYACGDNKSGQCGLGNTTPQIL-KPTRINTMEHR-XVKVGCG 874
+TD G VY G N GQ LG+ QI +PT ++ + + V + CG
Sbjct: 768 LTDAGEVYCWGRNDQGQ--LGDIDCQIRPEPTLVSGLASKGIVGIACG 813
>SB_45009| Best HMM Match : RCC1 (HMM E-Value=7.6e-21)
Length = 595
Score = 73.7 bits (173), Expect = 2e-13
Identities = 39/84 (46%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Frame = +2
Query: 569 HSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTDT 748
H +V+ E AYT+G N+ GQLG GD V R P LV LKGK I A G +++FVTD
Sbjct: 95 HVAVVTLERAAYTWGDNSRGQLGQGDLVNRDKPTLVDTLKGKAITRACCGDKYSVFVTDN 154
Query: 749 GCVYACGDNKSGQCGLG--NTTPQ 814
G V CG + +G G G ++TP+
Sbjct: 155 GIVMTCGSSDTGCLGHGDWSSTPR 178
Score = 58.4 bits (135), Expect = 7e-09
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +2
Query: 557 CTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVP-ELVPELKGKNIIHAAVGRHHTL 733
C H +V EG +T+G+ A G+LG G+ + VP ++ E +I G T+
Sbjct: 195 CGPHHVAVVCSEGLVFTWGKGADGRLGLGNEDDQCVPCQVTMEDANVSIRDVRCGLDGTM 254
Query: 734 FVTDTGCVYACGDNKSGQCGLGN 802
F+TDTG + ACG N + + GL N
Sbjct: 255 FLTDTGALLACGSNANNKLGLNN 277
Score = 55.6 bits (128), Expect = 5e-08
Identities = 33/103 (32%), Positives = 49/103 (47%)
Frame = +2
Query: 557 CTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLF 736
C +SV V++ G T G + G LG GD + P+L+ L ++ + G HH
Sbjct: 143 CGDKYSVFVTDNGIVMTCGSSDTGCLGHGDWSSTPRPKLIEGLLSVDVTAVSCGPHHVAV 202
Query: 737 VTDTGCVYACGDNKSGQCGLGNTTPQILKPTRINTMEHRXVKV 865
V G V+ G G+ GLGN Q + P ++ TME V +
Sbjct: 203 VCSEGLVFTWGKGADGRLGLGNEDDQCV-PCQV-TMEDANVSI 243
Score = 47.2 bits (107), Expect = 2e-05
Identities = 25/79 (31%), Positives = 38/79 (48%)
Frame = +2
Query: 533 RYRLIVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAA 712
RYR++ HS ++ E G +T G N GQLG G+T R P V +L+ + +
Sbjct: 308 RYRVVDMALGPTHSAVLVEPGHVHTLGSNQDGQLGSGNTKPRDAPASVKQLEDQTVTMVF 367
Query: 713 VGRHHTLFVTDTGCVYACG 769
G T+ T+ +Y G
Sbjct: 368 CGYGFTVAGTNDNTLYFWG 386
Score = 43.2 bits (97), Expect = 3e-04
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +2
Query: 659 SVPELVPELKGKNIIHAAVGRHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRIN 838
+ P V L ++ A+G H+ + + G V+ G N+ GQ G GNT P+ P +
Sbjct: 298 TTPTAVKALSRYRVVDMALGPTHSAVLVEPGHVHTLGSNQDGQLGSGNTKPRD-APASVK 356
Query: 839 TMEHRXV-KVGCGAEFS 886
+E + V V CG F+
Sbjct: 357 QLEDQTVTMVFCGYGFT 373
>SB_25012| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 436
Score = 70.5 bits (165), Expect = 2e-12
Identities = 44/121 (36%), Positives = 59/121 (48%), Gaps = 16/121 (13%)
Frame = +2
Query: 554 GCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTL 733
GC AG E GE +T+G N QLG G+T P L+ +GKNI A G HHTL
Sbjct: 102 GCDAGCDS--GENGEVFTWGHNGYSQLGNGNTNQGLYPSLLTSFQGKNITQLACGSHHTL 159
Query: 734 F----------------VTDTGCVYACGDNKSGQCGLGNTTPQILKPTRINTMEHRXVKV 865
++D GC+Y+ G N GQ G GN ++ PT+I + R V++
Sbjct: 160 VLNDEGEILCGYAHSLALSDAGCIYSWGANSYGQLGTGNKA-HLVTPTKIAVDKGRFVEI 218
Query: 866 G 868
G
Sbjct: 219 G 219
>SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 65.7 bits (153), Expect = 5e-11
Identities = 41/120 (34%), Positives = 60/120 (50%)
Frame = +2
Query: 515 HKFTDRRYRLIVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGK 694
+KF R ++ C HS +V+E G Y+FG GQLG GD VP+++ L +
Sbjct: 28 NKFWIRDDAVVNLSCGDEHSAVVTESGHLYSFGCGGDGQLGHGDAEDSHVPKIIEGLDVQ 87
Query: 695 NIIHAAVGRHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRINTMEHRXVKVGCG 874
H A G + +T+ G +Y G GQ GLG T +I PTR++ + + V CG
Sbjct: 88 KYKHLACGSDFSAAITENGELYTWGSCGEGQNGLGEDT-EI--PTRLH-LHGKVRMVSCG 143
Score = 62.9 bits (146), Expect = 3e-10
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Frame = +2
Query: 539 RLIVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRS-VPELVPELKGKNIIHAAV 715
+++V+ C A + +V++ G YTFG+ GQLG G ++ + PE +P + +
Sbjct: 370 QVVVAACGAEFTAVVTKNGSVYTFGQGNQGQLGLGSSMMETEFPERIPLFEKVKARTVSC 429
Query: 716 GRHHTLFVTDTGCVYACGDNKSGQCGLGNTT-PQILKPTRINTMEHRXVK-VGCG 874
G T +T G +Y GD + G+ GLG+ KP ++ + VK V CG
Sbjct: 430 GESFTAVITKHGNLYTFGDGRHGKLGLGDECFSNTFKPEKVKRFNNFTVKMVTCG 484
Score = 35.5 bits (78), Expect = 0.058
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 698 IIHAAVGRHHTLFVTDTGCVYACGDNKSGQCGLGNTT-PQILKPTRINTMEHRXVKVGCG 874
+I G F+ D G +Y CG+ + G+ GL + + +I ++E + V CG
Sbjct: 319 VITMGFGPRFIAFIED-GSLYMCGEKEGGKLGLDHEQLDNTSQLQKIKSIEDQVVVAACG 377
Query: 875 AEFS 886
AEF+
Sbjct: 378 AEFT 381
>SB_7970| Best HMM Match : RCC1 (HMM E-Value=0)
Length = 651
Score = 65.3 bits (152), Expect = 6e-11
Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
Frame = +2
Query: 521 FTDRRYRLIVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNI 700
F D+R + +G +GHS+ ++ +G +T+G A G+LG GD + +P+ + G+
Sbjct: 229 FADQRVVAVSAG--SGHSLALTADGAVFTWGFGAHGRLGHGDEQHQLLPKKIEAFVGQRA 286
Query: 701 IHAAVGRHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRINTME-HRXVKVGCGA 877
+ + G H+L +T G V + G G+ G G+ Q+L P ++ + R V V G+
Sbjct: 287 VAVSAGPRHSLAITADGAVMSWGHGHRGKLGHGDEQNQLL-PNKVEALAGRRVVAVSAGS 345
Query: 878 EFS 886
+ S
Sbjct: 346 DHS 348
Score = 60.9 bits (141), Expect = 1e-09
Identities = 32/116 (27%), Positives = 55/116 (47%)
Frame = +2
Query: 539 RLIVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVG 718
R + A H + ++ +G +++G G+LG GD + +P+ V G+ ++ + G
Sbjct: 77 RAVSMSAGAAHCLALTADGAVWSWGHGGQGRLGHGDAQHQLLPKKVEAFAGQRVVAVSAG 136
Query: 719 RHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRINTMEHRXVKVGCGAEFS 886
H+L +T G V++ G + G+ G GNT Q+L R V V G S
Sbjct: 137 YFHSLALTADGRVWSWGYGRDGRLGHGNTQHQLLPKKLEGLAGQRVVAVSAGIAHS 192
Score = 55.6 bits (128), Expect = 5e-08
Identities = 31/107 (28%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Frame = +2
Query: 569 HSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTDT 748
HS+ ++ +G +++G G+LG G+T + +P+ + L G+ ++ + G H+L +T
Sbjct: 139 HSLALTADGRVWSWGYGRDGRLGHGNTQHQLLPKKLEGLAGQRVVAVSAGIAHSLAITAD 198
Query: 749 GCVYACGDNKSGQCGLGNTTPQILKPTRINTM-EHRXVKVGCGAEFS 886
G V++ G G+ G G Q+L P +I + R V V G+ S
Sbjct: 199 GSVWSWGWGGHGRLGHGEEKTQLL-PKKIEAFADQRVVAVSAGSGHS 244
Score = 54.8 bits (126), Expect = 9e-08
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Frame = +2
Query: 539 RLIVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVG 718
R++ HS+ + +G +++G GQLG GD + +P+ + G ++ + G
Sbjct: 389 RVVAVSAGEYHSLAIIADGAVWSWGFGYHGQLGHGDQQIQLLPKQIEAFAGLRVVAVSAG 448
Query: 719 RHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRINT-MEHRXVKVGCGAEFS 886
H+L +T G +++ G SG+ G G+ Q+L P ++ + V V GA S
Sbjct: 449 AAHSLAITADGALWSWGYGDSGRLGHGDEQDQLL-PKKVEAFVGPHVVAVSAGAAHS 504
Score = 53.2 bits (122), Expect = 3e-07
Identities = 25/99 (25%), Positives = 47/99 (47%)
Frame = +2
Query: 539 RLIVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVG 718
R++ HS ++ +G +++G A GQLG GD + +P+ V G+ ++ + G
Sbjct: 546 RVVAVSAGLRHSGALTADGALWSWGEGAYGQLGHGDEQRQLLPKKVEAFAGQRVVAVSAG 605
Query: 719 RHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRI 835
+H+L ++ G G + G G G L P ++
Sbjct: 606 AYHSLAISADGAFLTWGQGEDGCLGHGEDLSDQLLPKKV 644
>SB_5067| Best HMM Match : RCC1 (HMM E-Value=4.5e-16)
Length = 390
Score = 63.3 bits (147), Expect = 3e-10
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 7/117 (5%)
Frame = +2
Query: 557 CTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVP--ELKGKNIIHAAVGRHHT 730
C + H+++++ +G +++G GQLG G T T P LVP G I A G H+
Sbjct: 129 CGSSHTLVITGDGRLFSWGNGNSGQLGIGSTNTTLQPHLVPLGVTPGTRIEGVACGTRHS 188
Query: 731 LFVTDTGCVYACGDNKSGQCGLGNTTPQI----LKPTRINTMEHRXV-KVGCGAEFS 886
T+ G ++ G+N S Q G P LKP ++T+ +R V +V CG+ S
Sbjct: 189 FVWTEEGECFSFGNNYSAQLGYDFRKPDFKDNQLKPIYVDTLFNRKVLQVACGSRHS 245
Score = 58.4 bits (135), Expect = 7e-09
Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Frame = +2
Query: 557 CTAGHSVLVSEEGEAYTFGRNACGQLGFG----DTVTRSV-PELVPELKGKNIIHAAVGR 721
C HS + +EEGE ++FG N QLG+ D + P V L + ++ A G
Sbjct: 183 CGTRHSFVWTEEGECFSFGNNYSAQLGYDFRKPDFKDNQLKPIYVDTLFNRKVLQVACGS 242
Query: 722 HHTLFVTDTGCVYACGDNKSGQCGLGNTT 808
H+LF+ G V A G N GQ G+GN T
Sbjct: 243 RHSLFLFSNGHVAAVGCNNRGQIGIGNKT 271
Score = 43.6 bits (98), Expect = 2e-04
Identities = 32/114 (28%), Positives = 49/114 (42%)
Frame = +2
Query: 539 RLIVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVG 718
+++ C + HS+ + G G N GQ+G G+ + VP+L G ++ A G
Sbjct: 234 KVLQVACGSRHSLFLFSNGHVAAVGCNNRGQIGIGNKTDTFCIQNVPDLTGVTVV--ACG 291
Query: 719 RHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRINTMEHRXVKVGCGAE 880
H L G V+A G +K+ CG +L P I T VK G +
Sbjct: 292 NSHCLAADVQGQVWAWGYSKA--CG---AREDLLSPENIFTSTDSCVKALSGGD 340
Score = 42.7 bits (96), Expect = 4e-04
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 7/106 (6%)
Frame = +2
Query: 590 EGEAYTFGRNACGQLGFG--DTVTRSVPELVPELKGKN--IIHAAVGRHHTLFVTDTGCV 757
EG T+G Q G G + V S P L G++ + H A G HTL +T G +
Sbjct: 84 EGFLITWGCGEFAQHGHGHCNDVPISSGLFNPLLVGQDGQVTHIACGSSHTLVITGDGRL 143
Query: 758 YACGDNKSGQCGLG--NTTPQ-ILKPTRINTMEHRXVKVGCGAEFS 886
++ G+ SGQ G+G NTT Q L P + T R V CG S
Sbjct: 144 FSWGNGNSGQLGIGSTNTTLQPHLVPLGV-TPGTRIEGVACGTRHS 188
>SB_20583| Best HMM Match : RCC1 (HMM E-Value=6.2e-08)
Length = 970
Score = 62.5 bits (145), Expect = 4e-10
Identities = 39/117 (33%), Positives = 56/117 (47%), Gaps = 17/117 (14%)
Frame = +2
Query: 539 RLIVSGCTAGHSVLVSE---------EGEAYTFGRNACGQLGFGDTVTRSVPELVPEL-- 685
R++ C A H+VL++E G AY++GR G LG G ++ + P V L
Sbjct: 161 RVMSMACGAYHTVLLAEGYGWLGNLSSGVAYSWGRGGNGALGHGTLLSLARPSYVKRLYH 220
Query: 686 ------KGKNIIHAAVGRHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRIN 838
K + A GR H+ F+T GCVY CG N+ GQ G L PT+++
Sbjct: 221 GDKDGKDAKTVSQVAAGRAHSAFLTKDGCVYTCGSNQYGQLGYYTKETYKLLPTKVD 277
Score = 37.5 bits (83), Expect = 0.014
Identities = 21/68 (30%), Positives = 29/68 (42%)
Frame = +2
Query: 680 ELKGKNIIHAAVGRHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRINTMEHRXV 859
EL K I+ A G H +TD+G + CG K GQ G + T + + R
Sbjct: 487 ELDSKIIVQIACGAFHVAALTDSGELLTCGTGKHGQLGHTHMRSSDEFQTVLLSKVERFA 546
Query: 860 KVGCGAEF 883
V CG +
Sbjct: 547 SVSCGIAY 554
>SB_17186| Best HMM Match : RCC1 (HMM E-Value=1.5e-19)
Length = 637
Score = 59.7 bits (138), Expect = 3e-09
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Frame = +2
Query: 557 CTAGHSVLVSEEGEAYTFGRNACG-QLGFGDT-VTRSVPELVPELKGKNIIHAAVGRHHT 730
C + S+ ++ G+ Y +G CG LG G T + P+L+ L+ +++ +VG H
Sbjct: 518 CGSQCSLALTSTGQVYVWG---CGPSLGTGSVDATSATPKLLLALQSHSVVDISVGDSHC 574
Query: 731 LFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRI 835
+ +T VYA G+N GQCG G+ T I KP ++
Sbjct: 575 VALTQDNNVYAWGNNSMGQCGQGHCTTPITKPKKV 609
Score = 52.4 bits (120), Expect = 5e-07
Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +2
Query: 566 GHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHA-AVGRHHTLFVT 742
GH++ ++ +G+ Y++G G+LG G++ T+ +P+LV G ++ A G H+ VT
Sbjct: 395 GHTLALTLDGKVYSWGDGDYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAAVT 454
Query: 743 DTGCVYACGDNKSGQCG 793
+ G +Y G+ G+ G
Sbjct: 455 EDGELYTWGEGDYGRLG 471
Score = 37.9 bits (84), Expect = 0.011
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Frame = +2
Query: 578 LVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVP---ELKGKNIIHAAVGRHHTLFVTDT 748
++ +G + G+ + G+LG GD+ ++ + + E K++ + HTL +T
Sbjct: 344 VIFPDGFVHACGKGSYGRLGLGDSTNQTQLKRLNFDNECLVKSVSSSKGSDGHTLALTLD 403
Query: 749 GCVYACGDNKSGQCGLGNTTPQ 814
G VY+ GD G+ G GN+ Q
Sbjct: 404 GKVYSWGDGDYGKLGHGNSQTQ 425
Score = 37.1 bits (82), Expect = 0.019
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 24/108 (22%)
Frame = +2
Query: 569 HSVLVSEEGEAYTFGRNACGQL-----------GFGDTVTRSVP----------ELVPEL 685
HS V+E+GE YT+G G+L G GD +R+VP +++ L
Sbjct: 449 HSAAVTEDGELYTWGEGDYGRLGSCHSIARPVSGHGDNNSRNVPVQVKDVANVGQVIEAL 508
Query: 686 KGKNIIHAAVGRHHTLFVTDTGCVY--ACGDN-KSGQCGLGNTTPQIL 820
+G I G +L +T TG VY CG + +G + TP++L
Sbjct: 509 QGMVIRKVCCGSQCSLALTSTGQVYVWGCGPSLGTGSVDATSATPKLL 556
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 716 GRHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQ 814
G++ T + G V+ACG G+ GLG++T Q
Sbjct: 338 GQYCTFVIFPDGFVHACGKGSYGRLGLGDSTNQ 370
>SB_2363| Best HMM Match : RCC1 (HMM E-Value=0.00041)
Length = 234
Score = 59.7 bits (138), Expect = 3e-09
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Frame = +2
Query: 557 CTAGHSVLVSEEGEAYTFGRNACG-QLGFGDT-VTRSVPELVPELKGKNIIHAAVGRHHT 730
C + S+ ++ G+ Y +G CG LG G T + P+L+ L+ +++ +VG H
Sbjct: 15 CGSQCSLALTSTGQVYVWG---CGPSLGTGSVDATSATPKLLLALQSHSVVDISVGDSHC 71
Query: 731 LFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRI 835
+ +T VYA G+N GQCG G+ T I KP ++
Sbjct: 72 VALTQDNNVYAWGNNSMGQCGQGHCTTPITKPKKV 106
>SB_18907| Best HMM Match : RCC1 (HMM E-Value=0)
Length = 444
Score = 56.8 bits (131), Expect = 2e-08
Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Frame = +2
Query: 557 CTAGHSVLVSEEG-EAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNI------IHAAV 715
C + + +V++ G + Y +G N GQLG GD T P V L N I A
Sbjct: 262 CGSFATFVVAKTGSDVYAWGLNNYGQLGTGDVQTWHFPVKVKSLSQLNKSEKDKHITIAN 321
Query: 716 GRHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRINTMEHRXV-KVGCG 874
G+HHT+ G VYA G G+ GLG+ + P I ++++ + KV CG
Sbjct: 322 GQHHTIVCDPNGKVYALGRADYGRLGLGDGAKETALPAHITSLDNEVIEKVACG 375
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +2
Query: 587 EEGEAYTFGRNACGQLGFG-DTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTDTGCVYA 763
E G+A T G+ GQLG G DT+ R P + +L+G I+ G HT+ ++ G VY
Sbjct: 47 ESGQALTLGQGDVGQLGLGPDTLERKKPAVPIDLEGVPIVQVESGGMHTVALSKDGKVYT 106
Query: 764 CGDNKSGQCGLGNTT 808
G N G G T+
Sbjct: 107 WGCNDDGALGRETTS 121
Score = 49.6 bits (113), Expect = 3e-06
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Frame = +2
Query: 569 HSVLVSEEGEAYTFGRNACGQLGFGDTVTRS-VPELVPELKGKNIIHAAVGRHHTLFVTD 745
H+++ G+ Y GR G+LG GD + +P + L + I A G + V+D
Sbjct: 325 HTIVCDPNGKVYALGRADYGRLGLGDGAKETALPAHITSLDNEVIEKVACGECVSFAVSD 384
Query: 746 TGCVYACGDNKSGQCGLGN-----TTPQILKPTRINTMEHRXVKVGCGAE 880
G +Y+ G Q G GN TTP ++ +N+ HR + V G +
Sbjct: 385 KGELYSWGMGSCLQLGNGNDEDDVTTPAKVQGKNLNSETHRVLGVSAGGQ 434
Score = 49.2 bits (112), Expect = 4e-06
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 7/109 (6%)
Frame = +2
Query: 569 HSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGK----NIIHAAVGRHHTLF 736
H+V +S++G+ YT+G N G LG +T + E P + NI+ + G HT
Sbjct: 94 HTVALSKDGKVYTWGCNDDGALG-RETTSEGEEEFQPGVVSMPDDVNIVMVSAGDSHTAA 152
Query: 737 VTDTGCVYACGD--NKSGQCGLGNTTPQILKPTRINTME-HRXVKVGCG 874
++D G VYA G + SGQ GL + KP I T E R +K+ G
Sbjct: 153 LSDQGTVYAWGTYRDASGQIGLQPDGVK-KKPAVILTSESDRIIKIASG 200
Score = 44.8 bits (101), Expect = 9e-05
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +2
Query: 569 HSVLVSEEGEAYTFG--RNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLFVT 742
H+ +S++G Y +G R+A GQ+G + P ++ + II A G HT +T
Sbjct: 149 HTAALSDQGTVYAWGTYRDASGQIGLQPDGVKKKPAVILTSESDRIIKIASGNDHTAALT 208
Query: 743 DTGCVYACGDNKSGQCG 793
+G ++ G + GQ G
Sbjct: 209 TSGNLFTLGCAEQGQLG 225
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +2
Query: 572 SVLVSEEGEAYTFGRNACGQLGFG---DTVTRSVPELVPELKGK--NIIHAAVGRHHTLF 736
S VS++GE Y++G +C QLG G D VT L + ++ + G HT+
Sbjct: 379 SFAVSDKGELYSWGMGSCLQLGNGNDEDDVTTPAKVQGKNLNSETHRVLGVSAGGQHTVI 438
Query: 737 V 739
+
Sbjct: 439 L 439
>SB_55819| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2408
Score = 50.4 bits (115), Expect = 2e-06
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = +2
Query: 563 AGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHT 730
A H + ++ GE + +G N GQLG G + + P ++P+LKGKNI + GR+H+
Sbjct: 1819 AEHVLALTSTGEVWGWGSNVDGQLGLGHSNAQREPCVIPDLKGKNIRQISAGRNHS 1874
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/86 (30%), Positives = 39/86 (45%)
Frame = +2
Query: 557 CTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLF 736
C SV+++ +G ++FG+ G P+ + L I VG H L
Sbjct: 1765 CGTQFSVVLTNDGRVFSFGQERLTGQPEGRLRGPQKPQQIQALASHFIDDVCVGAEHVLA 1824
Query: 737 VTDTGCVYACGDNKSGQCGLGNTTPQ 814
+T TG V+ G N GQ GLG++ Q
Sbjct: 1825 LTSTGEVWGWGSNVDGQLGLGHSNAQ 1850
Score = 42.7 bits (96), Expect = 4e-04
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Frame = +2
Query: 557 CTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRH---H 727
C + +V G G + G+LG G++ + L+G +I A R H
Sbjct: 1460 CGQNCTFVVQVNGTILACGEGSYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGSDGH 1519
Query: 728 TLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRINTMEHRXV 859
+L +TD+G V++ GD G+ G GN+ Q +P +I + V
Sbjct: 1520 SLALTDSGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALRGEEV 1562
Score = 40.7 bits (91), Expect = 0.002
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Frame = +2
Query: 557 CTAGHSVLVSEEGEA-YTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTL 733
C H++++S +G + FG G+LG G ++ P+ + L G G ++
Sbjct: 1712 CGLNHTLVLSADGNTVWAFGDGDYGKLGLGSCTAKTSPQAIDVLAGIGCKKICCGTQFSV 1771
Query: 734 FVTDTGCVYACGDNK-SGQCGLGNTTPQILKPTRINTMEHRXVKVGC-GAE 880
+T+ G V++ G + +GQ PQ KP +I + + C GAE
Sbjct: 1772 VLTNDGRVFSFGQERLTGQPEGRLRGPQ--KPQQIQALASHFIDDVCVGAE 1820
>SB_30518| Best HMM Match : FYVE (HMM E-Value=1.2e-18)
Length = 447
Score = 48.8 bits (111), Expect = 6e-06
Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
Frame = +2
Query: 590 EGEAYTFGRNACGQLGFG-DTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTDTGCVYAC 766
EG ++FG N GQLG D + S + V L I A G H+ + + G ++ C
Sbjct: 240 EGALFSFGENDYGQLGIPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAALAEKGRMFCC 299
Query: 767 GDNKSGQCGL-------GNTTPQILKPTRINTMEHRXVKVGCG 874
GDN GQ G + T + R+ T + R V V CG
Sbjct: 300 GDNTYGQLGAHLNDNQDDHVTYNVAVRVRVPT-DFRCVHVACG 341
Score = 34.3 bits (75), Expect = 0.13
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Frame = +2
Query: 557 CTAGHSVLVSEEGEAYTFGRNACGQLGF------GDTVTRSVPELVPELKGKNIIHAAVG 718
C + HS ++E+G + G N GQLG D VT +V V +H A G
Sbjct: 282 CGSFHSAALAEKGRMFCCGDNTYGQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVHVACG 341
Query: 719 RHHTLFVTD 745
HT VT+
Sbjct: 342 DSHTAVVTE 350
>SB_29134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 44.8 bits (101), Expect = 9e-05
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +2
Query: 566 GHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPE--LVPELKGKNIIHAAVGRHHTLFV 739
GH+ ++++ E YT G N GQLG GDT+ R L+P +K H + G +HTL +
Sbjct: 96 GHTAMITDSRELYTCGWNNRGQLGLGDTINRIELHRVLIPPVK-----HVSCGWNHTLAI 150
Query: 740 TDTGCV 757
T V
Sbjct: 151 TGVSWV 156
Score = 43.2 bits (97), Expect = 3e-04
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = +2
Query: 611 GRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTDTGCVYACGDNKSGQC 790
G N+ GQL G T P + K +++ G HT +TD+ +Y CG N GQ
Sbjct: 60 GANSYGQLACGHTDDVIKPAVHSNWKD-DVLCITGGGGHTAMITDSRELYTCGWNNRGQL 118
Query: 791 GLGNTTPQI-LKPTRINTMEHRXVKVGCG 874
GLG+T +I L I ++H V CG
Sbjct: 119 GLGDTINRIELHRVLIPPVKH----VSCG 143
>SB_32347| Best HMM Match : RCC1 (HMM E-Value=0.00072)
Length = 677
Score = 38.7 bits (86), Expect = 0.006
Identities = 23/71 (32%), Positives = 35/71 (49%)
Frame = +2
Query: 632 LGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTDTGCVYACGDNKSGQCGLGNTTP 811
LG GDT + P V EL K I G +H+L ++ VY+ G GQ GL +
Sbjct: 47 LGQGDTQQHTRPVYVTELSDKKCIAVVCGHYHSLALSADQQVYSWGWGVHGQLGLDSIED 106
Query: 812 QILKPTRINTM 844
+L P+ + ++
Sbjct: 107 ALL-PSHVTSL 116
Score = 37.1 bits (82), Expect = 0.019
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +2
Query: 557 CTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLF 736
C HS+ +S + + Y++G GQLG +P V L G + A G HT
Sbjct: 74 CGHYHSLALSADQQVYSWGWGVHGQLGLDSIEDALLPSHVTSLSGAFVTQLAAGYSHTAV 133
Query: 737 VTDTGC 754
+T T C
Sbjct: 134 LT-TEC 138
>SB_31129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 160
Score = 35.5 bits (78), Expect = 0.058
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 716 GRHHTLFVTDTGCVYACGDNKSGQCGLGN 802
G T+F+TDTG + ACG N + + GL N
Sbjct: 14 GLDGTMFLTDTGALLACGSNANNKLGLNN 42
>SB_31780| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 964
Score = 35.1 bits (77), Expect = 0.076
Identities = 20/82 (24%), Positives = 35/82 (42%)
Frame = +2
Query: 557 CTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLF 736
C + H + V+ + E + +GR G+LG G P+ + +G G +
Sbjct: 480 CGSSHIMAVTADHEVFAWGRGDNGRLGTGSQQEYWSPKAISLPEGMRARSVHCGVDCSFA 539
Query: 737 VTDTGCVYACGDNKSGQCGLGN 802
+T + ACG N+ + L N
Sbjct: 540 ITLENKLLACGSNRCNKLALDN 561
Score = 34.7 bits (76), Expect = 0.10
Identities = 24/85 (28%), Positives = 33/85 (38%), Gaps = 6/85 (7%)
Frame = +2
Query: 557 CTAGHSVLVSEEGEAYTFGRNACGQLGFG--DTVTRSVPEL----VPELKGKNIIHAAVG 718
C S ++ E + G N C +L D V L VP+ A+G
Sbjct: 532 CGVDCSFAITLENKLLACGSNRCNKLALDNEDGPVEEVAVLRQVSVPDFNSVGTSSVAMG 591
Query: 719 RHHTLFVTDTGCVYACGDNKSGQCG 793
HTL + G +Y+ G N GQ G
Sbjct: 592 TSHTLVLLQNGKLYSFGSNSFGQLG 616
Score = 34.7 bits (76), Expect = 0.10
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +2
Query: 569 HSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTDT 748
H++++ + G+ Y+FG N+ GQLG+ P+LV L ++ + A G ++ V+
Sbjct: 594 HTLVLLQNGKLYSFGSNSFGQLGYVREGVSRFPQLVESL--NDVSYVACGDTFSVAVSSD 651
Query: 749 GCVYAC 766
C
Sbjct: 652 TTAALC 657
>SB_34545| Best HMM Match : RCC1 (HMM E-Value=0.027)
Length = 230
Score = 33.1 bits (72), Expect = 0.31
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +2
Query: 578 LVSEEGEAYTFGRNACGQLGFGDTVTRSVPELV--PELKGKNI 700
LV G YTFGR GQLG G T + P P L+ NI
Sbjct: 34 LVPSSGRVYTFGRGGDGQLGLGVTNNCNSPMTAKGPWLRSNNI 76
>SB_22290| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 485
Score = 30.3 bits (65), Expect = 2.2
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +2
Query: 323 PPAEQSKPSTPEPEECTTKLPEELLKTFYKT--PGVLMIAGLVSWDL-TARRDNNPTKRT 493
PP++Q K PEPE+ T+ EL + K L A D TA + N K
Sbjct: 200 PPSKQEKKEEPEPEKMETETEPELAENEKKAMEEKELGNAAYKKKDFDTAHKHFNNAKEL 259
Query: 494 HPNLYTFH 517
+P+ TF+
Sbjct: 260 NPDNMTFY 267
>SB_50916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1681
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -3
Query: 671 ARERSVSPCLRSRVDHTHCDQTCRLLPLRTPKLNVLQ 561
A R P L R+D +T RLLP TP+ +LQ
Sbjct: 204 AEPREARPKLSERLDDGRDQKTMRLLPRGTPRGRILQ 240
>SB_48230| Best HMM Match : DUF152 (HMM E-Value=1.5)
Length = 579
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 462 PGGTTIQPNVPTRTFIHFISSPIVG 536
PGGT P+VPT+ ++ S+P+ G
Sbjct: 264 PGGTATIPSVPTQRVVYDQSAPLAG 288
>SB_39161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2103
Score = 28.7 bits (61), Expect = 6.6
Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 5/87 (5%)
Frame = +2
Query: 410 KTPGVLMIAGLVSWDLTAR----RDNNPTKRTHPNLYTF-HKFTDRRYRLIVSGCTAGHS 574
K PG + GLV+ + RD P + LYT +F + L C+A S
Sbjct: 1197 KEPGAIHSTGLVTQESCIVEIPIRDLEPQVHSCAGLYTLKERFNNLESELDYDECSAARS 1256
Query: 575 VLVSEEGEAYTFGRNACGQLGFGDTVT 655
+ + EG G + GFG T
Sbjct: 1257 LDIRYEGSENNLGTFKVTREGFGTIET 1283
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,846,010
Number of Sequences: 59808
Number of extensions: 606343
Number of successful extensions: 1691
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1666
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2526446612
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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