Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_I14
         (925 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1201 - 11419851-11419913,11420090-11420311                       30   2.3  
09_06_0235 - 21763470-21764511,21767865-21768261,21768625-217686...    29   3.9  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.9  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   9.1  
08_02_0514 + 18021365-18022527,18023489-18023660                       28   9.1  
04_04_0338 + 24509698-24510042,24510373-24510490,24510539-245106...    28   9.1  

>07_01_1201 - 11419851-11419913,11420090-11420311
          Length = 94

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
 Frame = +1

Query: 601 LRPPDEHHKNRRSSQRWRN--PTGL*RYQAFPPGKLPRALSCSDPAXLPDTXVRLSPFRE 774
           L PP          Q+WR+  PTG   + +FP G LP A     PA        L P R 
Sbjct: 13  LLPPPPPLPALPQGQQWRSTGPTGKLCFCSFPAGALPPAAGAGQPAPDRQPATPLFPSRV 72

Query: 775 A 777
           A
Sbjct: 73  A 73


>09_06_0235 -
           21763470-21764511,21767865-21768261,21768625-21768632,
           21769489-21769565
          Length = 507

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 21/77 (27%), Positives = 31/77 (40%)
 Frame = -3

Query: 917 GGLKTIVTGKGAAVGLNGGSXTQPSLERTTYTEGEIPXGVRL*GKRHASRKGXRRTXVSG 738
           GG  +IVT  G A    GG    PSL  ++   G +P        + A++ G   +  + 
Sbjct: 340 GGQGSIVTSSGLAGNHGGGGGGFPSLYNSSEPAGTLPQMSATALLQKAAQMGATTSSYNA 399

Query: 737 KXAGSEQESARGSXPGG 687
             AG      RG+   G
Sbjct: 400 GGAGGASSLLRGASSHG 416


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +2

Query: 413 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 568
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 362 NESAN---ARGEAVCVLGALPLPRSLTRCAR 445
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>08_02_0514 + 18021365-18022527,18023489-18023660
          Length = 444

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +2

Query: 620 ITKID--AQVRGGE-TXQDYKDTRRFPLXSSLVRSPVPTLPA 736
           ITKID  A V GG+ T Q     RR PL + +  SP+P   A
Sbjct: 396 ITKIDPAASVVGGKLTWQTAARPRRLPLSAKITFSPLPPFGA 437


>04_04_0338 +
           24509698-24510042,24510373-24510490,24510539-24510642,
           24510823-24511491
          Length = 411

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 15/54 (27%), Positives = 23/54 (42%)
 Frame = +1

Query: 751 VRLSPFREAWRXPHSLTPXGISPSV*VVRSKLGCVHEPPFSPTAAPFPVTIVLS 912
           + +SPFR AWR          S  +    S +G +    F P    FPV + ++
Sbjct: 308 IEVSPFRLAWRTAFVCVTTAASTLLPFFGSMVGLIGAASFWPLTVYFPVEMYIA 361


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,240,141
Number of Sequences: 37544
Number of extensions: 390353
Number of successful extensions: 1134
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)