Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_I14
         (925 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens ...    33   1.5  
AK126463-1|BAC86558.1|  559|Homo sapiens protein ( Homo sapiens ...    33   1.5  
AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein.             33   1.5  
AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activat...    33   1.9  
Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase w...    31   7.8  
X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2 pr...    31   7.8  

>AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens cDNA
            FLJ46149 fis, clone TESTI4000621, moderately  similar to
            Homo sapiens Snf2-related CBP activator protein (SRCAP).
            ).
          Length = 2427

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 23/66 (34%), Positives = 27/66 (40%)
 Frame = +1

Query: 691  PGKLPRALSCSDPAXLPDTXVRLSPFREAWRXPHSLTPXGISPSV*VVRSKLGCVHEPPF 870
            P   P  +S S PA L      L+P   A   P SL P G SPS   +   LG    P  
Sbjct: 1458 PISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASAL--TLGLATAPSL 1515

Query: 871  SPTAAP 888
            S +  P
Sbjct: 1516 SSSQTP 1521


>AK126463-1|BAC86558.1|  559|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44499 fis, clone UTERU3000665, highly  similar
           to Homo sapiens Snf2-related CBP activator protein
           (SRCAP). ).
          Length = 559

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 23/66 (34%), Positives = 27/66 (40%)
 Frame = +1

Query: 691 PGKLPRALSCSDPAXLPDTXVRLSPFREAWRXPHSLTPXGISPSV*VVRSKLGCVHEPPF 870
           P   P  +S S PA L      L+P   A   P SL P G SPS   +   LG    P  
Sbjct: 107 PISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASAL--TLGLATAPSL 164

Query: 871 SPTAAP 888
           S +  P
Sbjct: 165 SSSQTP 170


>AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein.
          Length = 3053

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 23/66 (34%), Positives = 27/66 (40%)
 Frame = +1

Query: 691  PGKLPRALSCSDPAXLPDTXVRLSPFREAWRXPHSLTPXGISPSV*VVRSKLGCVHEPPF 870
            P   P  +S S PA L      L+P   A   P SL P G SPS   +   LG    P  
Sbjct: 1281 PISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASAL--TLGLATAPSL 1338

Query: 871  SPTAAP 888
            S +  P
Sbjct: 1339 SSSQTP 1344


>AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activator
            SRCAP protein.
          Length = 2971

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 23/66 (34%), Positives = 27/66 (40%)
 Frame = +1

Query: 691  PGKLPRALSCSDPAXLPDTXVRLSPFREAWRXPHSLTPXGISPSV*VVRSKLGCVHEPPF 870
            P   P  +S S PA L      L+P   A   P SL P G SPS   +   LG    P  
Sbjct: 1199 PISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLQPSGASPSASAL--TLGLATAPSL 1256

Query: 871  SPTAAP 888
            S +  P
Sbjct: 1257 SSSQTP 1262


>Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase with
           SH3 domain, leucine zipper domain and proline rich
           protein.
          Length = 953

 Score = 30.7 bits (66), Expect = 7.8
 Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
 Frame = -1

Query: 784 SATLPEREXGGPXYPVSX-QGRNRRAHEGAXQGETPGIFIVLXGFATSDLSVDFCDARQG 608
           S+TL +   GG        +G  + +      G++P    +  GFA+ +   +F +A  G
Sbjct: 561 SSTLQKERVGGEERLKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDG 620

Query: 607 GGAYGKTPATRPFYGSWP 554
           G +   +P + P Y S P
Sbjct: 621 GSSVPPSPYSTPSYLSVP 638


>X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2
           protein.
          Length = 954

 Score = 30.7 bits (66), Expect = 7.8
 Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
 Frame = -1

Query: 784 SATLPEREXGGPXYPVSX-QGRNRRAHEGAXQGETPGIFIVLXGFATSDLSVDFCDARQG 608
           S+TL +   GG        +G  + +      G++P    +  GFA+ +   +F +A  G
Sbjct: 562 SSTLQKERVGGEERLKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDG 621

Query: 607 GGAYGKTPATRPFYGSWP 554
           G +   +P + P Y S P
Sbjct: 622 GSSVPPSPYSTPSYLSVP 639


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,066,021
Number of Sequences: 237096
Number of extensions: 2073328
Number of successful extensions: 6108
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6103
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12047931574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)