Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_I13
         (824 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    24   1.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.7  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   5.1  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 174 PFLFLVPTPFLKLINFASLQ 115
           P+LF VP P + L +F S Q
Sbjct: 197 PYLFFVPPPLMFLQDFLSHQ 216


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 174 PFLFLVPTPFLKLINFASLQ 115
           P+LF VP P + L +F S Q
Sbjct: 430 PYLFFVPPPLMFLQDFLSHQ 449


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 174 PFLFLVPTPFLKLINFASLQ 115
           P+LF VP P + L +F S Q
Sbjct: 430 PYLFFVPPPLMFLQDFLSHQ 449


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 239 HLHHYALLISPGSF 198
           HL+H  +L+SPG +
Sbjct: 116 HLYHPQVLLSPGGY 129


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,375
Number of Sequences: 336
Number of extensions: 2997
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22621642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)