Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_I12
         (910 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          24   2.2  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   2.2  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    24   2.2  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    24   2.2  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    24   2.2  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    24   2.2  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   2.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   6.7  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   6.7  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    22   8.9  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 393 SH*PYTFHINICLSKPAEA 337
           +H P+ FHI I   KP +A
Sbjct: 496 NHKPFNFHITINADKPMKA 514


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 393 SH*PYTFHINICLSKPAEA 337
           +H P+ FHI I   KP +A
Sbjct: 496 NHKPFNFHITINADKPMKA 514


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +1

Query: 193 DLSSRHQRKGSCY-FICSKNIKLVCANYVIGRSPRRNL 303
           +L++ +   G C  FI +  ++ VC NYV  + P  N+
Sbjct: 359 NLTAMNVWDGVCMCFIYASLLEFVCVNYVGRKRPMHNV 396


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +1

Query: 193 DLSSRHQRKGSCY-FICSKNIKLVCANYVIGRSPRRNL 303
           +L++ +   G C  FI +  ++ VC NYV  + P  N+
Sbjct: 328 NLTAMNVWDGVCMCFIYASLLEFVCVNYVGRKRPMHNV 365


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +1

Query: 193 DLSSRHQRKGSCY-FICSKNIKLVCANYVIGRSPRRNL 303
           +L++ +   G C  FI +  ++ VC NYV  + P  N+
Sbjct: 379 NLTAMNVWDGVCMCFIYASLLEFVCVNYVGRKRPMHNV 416


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +1

Query: 193 DLSSRHQRKGSCY-FICSKNIKLVCANYVIGRSPRRNL 303
           +L++ +   G C  FI +  ++ VC NYV  + P  N+
Sbjct: 328 NLTAMNVWDGVCMCFIYASLLEFVCVNYVGRKRPMHNV 365


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 365 IFVCQSLQKPNVCLQDE 315
           +F C++ +K NVCL+ E
Sbjct: 105 LFECENKEKSNVCLKFE 121


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 671 SYPVTSVLFNDTAEKILSSGVD 736
           +YP   VLF  + E I  +G+D
Sbjct: 176 TYPFNPVLFISSLENISLNGID 197


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 671 SYPVTSVLFNDTAEKILSSGVD 736
           +YP   VLF  + E I  +G+D
Sbjct: 214 TYPFNPVLFISSLENISLNGID 235


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 303 SQPNFILKANIWLLQALTD 359
           ++ N I+K+N+WL    TD
Sbjct: 67  NEKNQIMKSNVWLRFIWTD 85


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 256,829
Number of Sequences: 438
Number of extensions: 5557
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29509116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)