Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_I12
(910 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 235 4e-62
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 96 2e-20
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 94 1e-19
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 93 2e-19
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 88 7e-18
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 88 9e-18
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 88 9e-18
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 88 9e-18
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 88 9e-18
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 88 9e-18
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 87 1e-17
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 87 1e-17
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 85 5e-17
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 84 1e-16
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 84 1e-16
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 84 1e-16
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 83 2e-16
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 83 2e-16
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 82 4e-16
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 82 6e-16
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 81 1e-15
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 81 1e-15
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 81 1e-15
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 79 4e-15
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 79 5e-15
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 77 1e-14
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 77 1e-14
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 76 4e-14
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 76 4e-14
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 76 4e-14
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 75 7e-14
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 74 2e-13
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 73 2e-13
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 73 2e-13
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 73 2e-13
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 73 3e-13
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 72 5e-13
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 71 8e-13
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 71 1e-12
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 70 2e-12
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 70 2e-12
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 68 8e-12
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 68 8e-12
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 68 8e-12
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 68 1e-11
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 67 1e-11
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 67 1e-11
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 67 2e-11
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 66 2e-11
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 66 2e-11
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 66 3e-11
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 66 4e-11
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 66 4e-11
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 66 4e-11
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 65 7e-11
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 64 9e-11
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 64 2e-10
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 64 2e-10
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 64 2e-10
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 64 2e-10
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 64 2e-10
At2g47790.1 68415.m05965 transducin family protein / WD-40 repea... 63 2e-10
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 62 4e-10
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 62 5e-10
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 62 7e-10
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 62 7e-10
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 61 9e-10
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 61 1e-09
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 61 1e-09
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 60 2e-09
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 60 2e-09
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 60 2e-09
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 60 2e-09
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 60 2e-09
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 60 2e-09
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 60 2e-09
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 60 2e-09
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 60 2e-09
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 60 3e-09
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea... 59 3e-09
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 59 3e-09
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 59 3e-09
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 59 3e-09
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 59 3e-09
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 59 5e-09
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 58 6e-09
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 58 6e-09
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 58 6e-09
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 58 8e-09
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 58 1e-08
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 58 1e-08
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 57 1e-08
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 57 2e-08
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 56 2e-08
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 56 2e-08
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 56 2e-08
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 56 3e-08
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 55 6e-08
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 55 6e-08
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 55 6e-08
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 55 6e-08
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 55 7e-08
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 55 7e-08
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 55 7e-08
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 55 7e-08
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 55 7e-08
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 55 7e-08
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 54 1e-07
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 54 1e-07
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 54 1e-07
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 54 1e-07
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 54 1e-07
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 54 1e-07
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 54 2e-07
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 54 2e-07
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 54 2e-07
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 54 2e-07
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 53 2e-07
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 53 2e-07
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 53 2e-07
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 53 3e-07
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 53 3e-07
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 52 4e-07
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 52 4e-07
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 52 4e-07
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 52 4e-07
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 52 5e-07
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 52 7e-07
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 52 7e-07
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 52 7e-07
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 52 7e-07
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 52 7e-07
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 51 9e-07
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 51 9e-07
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 51 9e-07
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 51 9e-07
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 51 1e-06
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 51 1e-06
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 50 2e-06
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 50 2e-06
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 50 2e-06
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 50 3e-06
At3g56900.1 68416.m06329 aladin-related / adracalin-related weak... 50 3e-06
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 50 3e-06
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 49 4e-06
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 49 4e-06
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 49 4e-06
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 49 5e-06
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 48 7e-06
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 48 7e-06
At1g80710.1 68414.m09470 transducin family protein / WD-40 repea... 48 7e-06
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 48 7e-06
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 48 9e-06
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 48 9e-06
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 48 9e-06
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 48 9e-06
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 48 9e-06
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 48 1e-05
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 48 1e-05
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 47 2e-05
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 47 2e-05
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 47 2e-05
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 47 2e-05
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 46 3e-05
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 46 3e-05
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 46 3e-05
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 46 3e-05
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 46 3e-05
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 46 3e-05
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 46 3e-05
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 46 5e-05
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 46 5e-05
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 45 6e-05
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 45 8e-05
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 45 8e-05
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 45 8e-05
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 44 1e-04
At5g58760.1 68418.m07360 transducin family protein / WD-40 repea... 44 1e-04
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 44 1e-04
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 44 1e-04
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 44 2e-04
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 44 2e-04
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 43 2e-04
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 43 2e-04
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 43 2e-04
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 43 2e-04
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 43 2e-04
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 43 3e-04
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 38 4e-04
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 42 4e-04
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 42 4e-04
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 42 4e-04
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 42 6e-04
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 42 7e-04
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 41 0.001
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 41 0.001
At3g26480.1 68416.m03301 transducin family protein / WD-40 repea... 41 0.001
At5g11240.1 68418.m01313 transducin family protein / WD-40 repea... 40 0.002
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 40 0.002
At3g08850.1 68416.m01029 transducin family protein / WD-40 repea... 40 0.002
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 40 0.002
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 40 0.002
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 40 0.002
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 40 0.002
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 40 0.003
At2g34260.2 68415.m04192 transducin family protein / WD-40 repea... 40 0.003
At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,... 39 0.004
At1g65030.1 68414.m07371 transducin family protein / WD-40 repea... 39 0.004
At4g21530.1 68417.m03111 transducin family protein / WD-40 repea... 39 0.005
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 38 0.007
At2g26610.1 68415.m03193 expressed protein ; expression support... 38 0.007
At1g29320.1 68414.m03584 transducin family protein / WD-40 repea... 38 0.007
At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p pro... 38 0.009
At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p pro... 38 0.009
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 38 0.012
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 38 0.012
At3g52030.1 68416.m05707 F-box family protein / WD-40 repeat fam... 37 0.016
At1g69400.2 68414.m07968 transducin family protein / WD-40 repea... 37 0.016
At1g69400.1 68414.m07969 transducin family protein / WD-40 repea... 37 0.016
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 37 0.021
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 36 0.037
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 35 0.065
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 35 0.065
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 35 0.065
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 34 0.15
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 34 0.15
At3g26640.1 68416.m03329 transducin family protein / WD-40 repea... 33 0.20
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 33 0.20
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 33 0.20
At1g12910.1 68414.m01499 flower pigmentation protein (AN11) cont... 33 0.20
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 33 0.20
At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG... 33 0.26
At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG... 33 0.26
At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG... 33 0.26
At4g31160.1 68417.m04423 transducin family protein / WD-40 repea... 33 0.26
At4g00800.1 68417.m00110 expressed protein contains 1 WD-40 repe... 33 0.26
At1g64350.1 68414.m07292 transducin family protein / WD-40 repea... 33 0.26
At5g19920.1 68418.m02370 transducin family protein / WD-40 repea... 32 0.46
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 32 0.46
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 31 1.1
At3g33530.1 68416.m04290 transducin family protein / WD-40 repea... 31 1.4
At2g32160.2 68415.m03931 expressed protein 30 2.4
At5g51660.1 68418.m06405 cleavage and polyadenylation specificit... 29 3.2
At2g46560.1 68415.m05808 transducin family protein / WD-40 repea... 29 3.2
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 29 4.3
At1g03380.1 68414.m00317 expressed protein 29 4.3
At5g50970.1 68418.m06321 WD-40 repeat family protein contains Pf... 29 5.6
At1g54710.1 68414.m06237 expressed protein contains 3 WD-40 repe... 29 5.6
At3g56970.1 68416.m06340 basic helix-loop-helix (bHLH) family pr... 28 7.4
At3g17150.1 68416.m02188 invertase/pectin methylesterase inhibit... 28 7.4
At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 ... 28 9.8
At5g05570.1 68418.m00605 transducin family protein / WD-40 repea... 28 9.8
At4g33440.1 68417.m04751 glycoside hydrolase family 28 protein /... 28 9.8
At3g58900.1 68416.m06564 F-box family protein contains F-box dom... 28 9.8
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 28 9.8
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 235 bits (574), Expect = 4e-62
Identities = 103/205 (50%), Positives = 144/205 (70%)
Frame = +2
Query: 245 RTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTG 424
RTS+L APIMLL GH ++T KF+P G +AS DR+I +W V+G C+N MV+KGH
Sbjct: 38 RTSSLEAPIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKN 97
Query: 425 AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSA 604
AI+ L ++ DGS + + + D TV WDV TG +IKK+ H++FVNS RRGP L++S
Sbjct: 98 AILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISG 157
Query: 605 SDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLK 784
SDD T KLWD R+R + +F Y +T+V F+D A+KI + GVDN +K+WD+R + +
Sbjct: 158 SDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMT 217
Query: 785 IKGHTDTVTGLSLSWDGAYLLSING 859
++GH DT+TG+SLS DG+YLL+ NG
Sbjct: 218 LEGHQDTITGMSLSPDGSYLLT-NG 241
Score = 64.9 bits (151), Expect = 7e-11
Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 7/126 (5%)
Frame = +2
Query: 272 MLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNV--YG-QCENVMVMKGH----TGAI 430
M LEGHQ I P+G +L + G D ++ +W++ Y Q V + +GH +
Sbjct: 216 MTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNL 275
Query: 431 MQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASD 610
++ +SPDG+ + G++D V +WD + I KL GH VN P ++ S S
Sbjct: 276 LKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEP-IIGSCSS 334
Query: 611 DNTIKL 628
D I L
Sbjct: 335 DKNIYL 340
Score = 63.7 bits (148), Expect = 2e-10
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 8/163 (4%)
Frame = +2
Query: 296 EIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTG 475
+I F + + G D + +W++ + E M ++GH I + SPDGS+L T
Sbjct: 182 QITAVSFSDAADKIFTGGVDNDVKVWDLR-KGEATMTLEGHQDTITGMSLSPDGSYLLTN 240
Query: 476 ATDNTVAVWDV----PTGTRIKKLKGHA-NFVNSVSGARRGPE--LLVSASDDNTIKLWD 634
DN + VWD+ P +K +GH NF ++ P+ + + S D + +WD
Sbjct: 241 GMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWD 300
Query: 635 ARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDI 760
R + + V +F+ T I S D I + +I
Sbjct: 301 TTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYLGEI 343
Score = 58.0 bits (134), Expect = 8e-09
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 9/136 (6%)
Frame = +2
Query: 428 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 607
I + FS ++TG DN V VWD+ G L+GH + + +S + G LL +
Sbjct: 183 ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGM 242
Query: 608 DDNTIKLWDARKRNP----VASFDSSYP-----VTSVLFNDTAEKILSSGVDNVIKMWDI 760
D N + +WD R P V F+ + ++ K+ + D ++ +WD
Sbjct: 243 D-NKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDT 301
Query: 761 RNNQIXLKIKGHTDTV 808
+ + K+ GHT +V
Sbjct: 302 TSRRTIYKLPGHTGSV 317
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 96.3 bits (229), Expect = 2e-20
Identities = 56/202 (27%), Positives = 106/202 (52%), Gaps = 5/202 (2%)
Frame = +2
Query: 260 YAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQL 439
Y+ I EGH I + + + SA D + IW+ E + V++GHT + +
Sbjct: 75 YSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCV 134
Query: 440 CFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNT 619
F+P + + +G+ D T+ +W+V TG ++ +K H+ ++SV R G L+VSAS D +
Sbjct: 135 NFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDG-SLIVSASHDGS 193
Query: 620 IKLWDARKRNPVASF--DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKG 793
K+WDA++ + + D S V+ F+ + IL + +D+ +K+ + + G
Sbjct: 194 CKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTG 253
Query: 794 HTDTVTGLSLSW---DGAYLLS 850
HT+ V ++ ++ +G Y++S
Sbjct: 254 HTNKVFCITSAFSVTNGKYIVS 275
Score = 93.9 bits (223), Expect = 1e-19
Identities = 59/199 (29%), Positives = 97/199 (48%), Gaps = 3/199 (1%)
Frame = +2
Query: 260 YAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQL 439
Y + LEGH I KF +G LASA D+ +++W+ + +GH+ I L
Sbjct: 33 YRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNY-SLIHRYEGHSSGISDL 91
Query: 440 CFSPDGSHLYTGATDNTVAVWDVPTGTR-IKKLKGHANFVNSVSGARRGPELLVSASDDN 616
+S D + + + D T+ +WD + +K L+GH NFV V+ L+VS S D
Sbjct: 92 AWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVN-FNPPSNLIVSGSFDE 150
Query: 617 TIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQ-IXLKIK 790
TI++W+ + V + S P++SV FN I+S+ D K+WD + + I
Sbjct: 151 TIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLID 210
Query: 791 GHTDTVTGLSLSWDGAYLL 847
+ V+ S +G ++L
Sbjct: 211 DKSPAVSFAKFSPNGKFIL 229
Score = 86.2 bits (204), Expect = 3e-17
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 5/192 (2%)
Frame = +2
Query: 260 YAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVY-GQCENVMVMKGHTGAIMQ 436
Y + +L GH +F F+P + S FD I IW V G+C V ++K H+ I
Sbjct: 118 YECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKC--VRMIKAHSMPISS 175
Query: 437 LCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDN 616
+ F+ DGS + + + D + +WD GT +K L + S + + ++ A+ D+
Sbjct: 176 VHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDS 235
Query: 617 TIKLWDARKRNPVASF----DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLK 784
T+KL + + + + + +TS + I+S DN + +WD++ I +
Sbjct: 236 TLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQR 295
Query: 785 IKGHTDTVTGLS 820
++GHTD V +S
Sbjct: 296 LEGHTDAVISVS 307
Score = 80.6 bits (190), Expect = 1e-15
Identities = 42/160 (26%), Positives = 83/160 (51%), Gaps = 2/160 (1%)
Frame = +2
Query: 377 VYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFV 556
+Y ++ ++GHT AI + FS DG+ L + + D T+ +W + I + +GH++ +
Sbjct: 29 IYKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGI 88
Query: 557 NSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP--VTSVLFNDTAEKILSSG 730
+ ++ + SASDD T+++WDAR + V V FN + I+S
Sbjct: 89 SDLAWS-SDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGS 147
Query: 731 VDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
D I++W+++ + IK H+ ++ + + DG+ ++S
Sbjct: 148 FDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVS 187
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 93.9 bits (223), Expect = 1e-19
Identities = 53/220 (24%), Positives = 105/220 (47%), Gaps = 6/220 (2%)
Frame = +2
Query: 215 EKAVVTSSVPRTSNLYAP----IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVY 382
+ + T+S RT+ L+ + EGH + FHP GK+L + +D+ +W++
Sbjct: 310 DDCLATASADRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDIN 369
Query: 383 GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNS 562
E +++ +GH+ ++ + F DG+ + D+ VWD+ TG I +GH V S
Sbjct: 370 TGAE-LLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFS 428
Query: 563 VSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEK--ILSSGVD 736
V+ + G L S +DN ++WD R R + + + S + + E + ++ D
Sbjct: 429 VNFSPNGYHL-ASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYD 487
Query: 737 NVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLSIN 856
+ +W R+ + + GH V L ++ D + + +++
Sbjct: 488 MKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVS 527
Score = 90.2 bits (214), Expect = 2e-18
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 1/201 (0%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFS 448
I +L+ H+ F P LA+A DR +W G + +GH + ++ F
Sbjct: 291 IAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTDGTL--LQTFEGHLDRLARVAFH 348
Query: 449 PDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKL 628
P G +L T + D T +WD+ TG + +GH+ V ++ + G L S D+ ++
Sbjct: 349 PSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDG-ALAASCGLDSLARV 407
Query: 629 WDARKRNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDT 805
WD R + F PV SV F+ + S G DN ++WD+R + I H +
Sbjct: 408 WDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANL 467
Query: 806 VTGLSLSWDGAYLLSINGYTL 868
V+ + Y L+ Y +
Sbjct: 468 VSQVKYEPQEGYFLATASYDM 488
Score = 83.0 bits (196), Expect = 2e-16
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 1/173 (0%)
Frame = +2
Query: 254 NLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIM 433
N A ++L EGH ++ F +G AS G D +W++ +++V +GH +
Sbjct: 369 NTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTG-RSILVFQGHIKPVF 427
Query: 434 QLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDD 613
+ FSP+G HL +G DN +WD+ + + HAN V+ V + L +AS D
Sbjct: 428 SVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYD 487
Query: 614 NTIKLWDARKRNPVASF-DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNN 769
+ +W R + V S V S+ + I + D IK+W N
Sbjct: 488 MKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTSSGN 540
Score = 71.3 bits (167), Expect = 8e-13
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 1/180 (0%)
Frame = +2
Query: 314 FHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTV 493
F +GK LA+ +W + + V+K H + FSP L T + D T
Sbjct: 263 FSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTA 322
Query: 494 AVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDS- 670
+W GT ++ +GH + + V+ G + L + S D T +LWD + +
Sbjct: 323 KLWKT-DGTLLQTFEGHLDRLARVAFHPSG-KYLGTTSYDKTWRLWDINTGAELLLQEGH 380
Query: 671 SYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
S V + F S G+D++ ++WD+R + L +GH V ++ S +G +L S
Sbjct: 381 SRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLAS 440
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 93.1 bits (221), Expect = 2e-19
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 8/215 (3%)
Frame = +2
Query: 227 VTSSVPRTSNL--YAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQ---- 388
+ +P T++ Y L H + + KF +G+ LASA D+ I + +
Sbjct: 1 MAEEIPATASFTPYVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPI 60
Query: 389 CENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS 568
E V GH I + FS D + + + D T+ +WDV TG+ IK L GH N+ V+
Sbjct: 61 AEPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVN 120
Query: 569 GARRGPELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVI 745
+ ++VS S D T+++WD + + S PVT+V FN I+SS D +
Sbjct: 121 FNPQS-NMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLC 179
Query: 746 KMWDIRNNQ-IXLKIKGHTDTVTGLSLSWDGAYLL 847
++WD + I V+ + S +G ++L
Sbjct: 180 RIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFIL 214
Score = 92.7 bits (220), Expect = 3e-19
Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVY-GQCENVMVMKGHTGAIMQLCF 445
I L GH F F+P+ + S FD + IW+V G+C + V+ H+ + + F
Sbjct: 106 IKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKC--LKVLPAHSDPVTAVDF 163
Query: 446 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANF-VNSVSGARRGPELLVSASDDNTI 622
+ DGS + + + D +WD TG +K L N V+ V + G +LV D NT+
Sbjct: 164 NRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLD-NTL 222
Query: 623 KLWDARKRNPVASF----DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIK 790
+LW+ + ++ ++ Y ++S ++I+S DN + MW++ + ++ K++
Sbjct: 223 RLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLE 282
Query: 791 GHTDTVTGLS 820
GHT+TV ++
Sbjct: 283 GHTETVMNVA 292
Score = 75.4 bits (177), Expect = 5e-14
Identities = 46/177 (25%), Positives = 85/177 (48%), Gaps = 9/177 (5%)
Frame = +2
Query: 407 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV-----PTGTRIKKLKGHANFVNSVSG 571
+ H A+ + FS DG L + + D T+ + + P +++ GH N ++ V+
Sbjct: 20 LTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAF 79
Query: 572 ARRGPELLVSASDDNTIKLWDARKRNPVASF--DSSYPVTSVLFNDTAEKILSSGVDNVI 745
+ +VSASDD T+KLWD + + + ++Y V FN + I+S D +
Sbjct: 80 SSDA-RFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFC-VNFNPQSNMIVSGSFDETV 137
Query: 746 KMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLL--SINGYTLVXGR*TXHDLXALI 910
++WD+ + + H+D VT + + DG+ ++ S +G + T H + LI
Sbjct: 138 RIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLI 194
Score = 70.5 bits (165), Expect = 1e-12
Identities = 38/166 (22%), Positives = 76/166 (45%), Gaps = 4/166 (2%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNV-YGQCENVMVMKGHTGAIMQLCF 445
+ +L H + F+ +G + S+ +D IW+ G C ++ + + F
Sbjct: 148 LKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLI-DDENPPVSFVRF 206
Query: 446 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARR--GPELLVSASDDNT 619
SP+G + G DNT+ +W++ + +K GH N +S A + +VS S+DN
Sbjct: 207 SPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNC 266
Query: 620 IKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMW 754
+ +W+ + + + + V +V + T I S +D +++W
Sbjct: 267 VHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 88.2 bits (209), Expect = 7e-18
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 6/169 (3%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDG 457
+EG + P+ K L SAG RQI +W++ + + KGH G +M + G
Sbjct: 56 IEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLE-TLKCIRSWKGHEGPVMGMACHASG 114
Query: 458 SHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV-SGARRGPELLVSASDDNTIKLWD 634
L T D V VWDV G +GH V+S+ +L+S SDD T+++WD
Sbjct: 115 GLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWD 174
Query: 635 ARKRNP----VASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWDIRN 766
+N +A + + VTS+ ++ + S+G D V+ +WD+ +
Sbjct: 175 LNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHD 223
Score = 68.9 bits (161), Expect = 4e-12
Identities = 45/191 (23%), Positives = 86/191 (45%), Gaps = 11/191 (5%)
Frame = +2
Query: 284 GHQGEIFTAKFHPEG-KHLASAGFDRQILIWNVYGQCENV---------MVMKGHTGAIM 433
GH G+I F + S DR + +W++ G E+ V+ H I
Sbjct: 444 GHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDIN 503
Query: 434 QLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDD 613
+ + + S + TG+ D T ++W +P + LKGH + SV + + +++AS D
Sbjct: 504 SVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVD-QCVMTASGD 562
Query: 614 NTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIK 790
T+K+W + + +F+ + V F + +S G D ++K+W++ ++
Sbjct: 563 KTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYD 622
Query: 791 GHTDTVTGLSL 823
H D V L++
Sbjct: 623 QHEDKVWALAV 633
Score = 63.7 bits (148), Expect = 2e-10
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 1/135 (0%)
Frame = +2
Query: 353 DRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK 532
DR IW + +V+ +KGH I + FS + T + D TV +W + G+ +K
Sbjct: 520 DRTASIWRL-PDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKT 578
Query: 533 LKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTA 709
+GH + V S G + VS D +KLW+ +A++D V ++
Sbjct: 579 FEGHTSSVLRASFITDGTQ-FVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKT 637
Query: 710 EKILSSGVDNVIKMW 754
E I + G D VI +W
Sbjct: 638 EMIATGGGDAVINLW 652
Score = 60.9 bits (141), Expect = 1e-09
Identities = 36/149 (24%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Frame = +2
Query: 203 VGTREKAVVTSSVPRTSNLY-----APIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQIL 367
V + V T S RT++++ ++ L+GH+ IF+ +F + + +A D+ +
Sbjct: 507 VARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVK 566
Query: 368 IWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 544
IW + G C + +GHT ++++ F DG+ + D + +W+V T I H
Sbjct: 567 IWAISDGSC--LKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQH 624
Query: 545 ANFVNSVSGARRGPELLVSASDDNTIKLW 631
+ V +++ ++ E++ + D I LW
Sbjct: 625 EDKVWALAVGKK-TEMIATGGGDAVINLW 652
Score = 57.6 bits (133), Expect = 1e-08
Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 12/178 (6%)
Frame = +2
Query: 353 DRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDG-SHLYTGATDNTVAVWDV------- 508
D+ + +WN + + V GH G I+ + F+ S +G+ D T+ VW +
Sbjct: 425 DKTVRLWNATSK-SCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDS 483
Query: 509 --PTGTRIKKL-KGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDS-SY 676
P + + + H +NSV+ AR L+ + S+D T +W V +
Sbjct: 484 EEPINLKTRSVVAAHDKDINSVAVARND-SLVCTGSEDRTASIWRLPDLVHVVTLKGHKR 542
Query: 677 PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
+ SV F+ + ++++ D +K+W I + +GHT +V S DG +S
Sbjct: 543 RIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVS 600
Score = 56.8 bits (131), Expect = 2e-08
Identities = 63/262 (24%), Positives = 112/262 (42%), Gaps = 18/262 (6%)
Frame = +2
Query: 128 DIETKRKAEDASLLPSKRVRHEISVVGTREKAVVTSSVPRTSNLYAPIML-LEGHQGEIF 304
D E+KR A++LPS H + V ++ S V + L G+ EI
Sbjct: 306 DEESKRGFTAAAMLPSD---HGLLCVTADQQFFFYSVVENVEETELVLSKRLVGYNEEIA 362
Query: 305 TAKF-HPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQL--CFSPDGSHLY-T 472
KF E + LA A ++ +++V V+ GH ++ L C S G+ L T
Sbjct: 363 DMKFLGDEEQFLAVATNLEEVRVYDV-ATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVT 421
Query: 473 GATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLW------- 631
G+ D TV +W+ + + I GH + +V+ A++ VS S D T+K+W
Sbjct: 422 GSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISE 481
Query: 632 ------DARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKG 793
+ + R+ VA+ D +V ND+ + + D +W + + + +KG
Sbjct: 482 DSEEPINLKTRSVVAAHDKDINSVAVARNDSL--VCTGSEDRTASIWRLPDLVHVVTLKG 539
Query: 794 HTDTVTGLSLSWDGAYLLSING 859
H + + S +++ +G
Sbjct: 540 HKRRIFSVEFSTVDQCVMTASG 561
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 5/109 (4%)
Frame = +2
Query: 209 TREKAVVTSSVPRTSNLYAP-----IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIW 373
T ++ V+T+S +T ++A + EGH + A F +G S G D + +W
Sbjct: 551 TVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLW 610
Query: 374 NVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGT 520
NV E + H + L + TG D + +W T +
Sbjct: 611 NV-NTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLWHDSTAS 658
Score = 35.1 bits (77), Expect = 0.065
Identities = 27/139 (19%), Positives = 58/139 (41%), Gaps = 1/139 (0%)
Frame = +2
Query: 446 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 625
S DGS + D + + D + ++G ++ + +++ +LL SA I+
Sbjct: 28 SSDGSFIACACGD-VINIVDSTDSSVKSTIEGESDTLTALA-LSPDDKLLFSAGHSRQIR 85
Query: 626 LWDARKRNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTD 802
+WD + S+ PV + + + + ++G D + +WD+ +GH
Sbjct: 86 VWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKG 145
Query: 803 TVTGLSLSWDGAYLLSING 859
V+ + D + I+G
Sbjct: 146 VVSSILFHPDSNKNILISG 164
Score = 29.1 bits (62), Expect = 4.3
Identities = 22/108 (20%), Positives = 46/108 (42%), Gaps = 1/108 (0%)
Frame = +2
Query: 524 IKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFND 703
+K+ G F+ S G+ ++ + + I + D+ + ++ + + L
Sbjct: 16 LKQFYGGGPFIVSSDGS------FIACACGDVINIVDSTDSSVKSTIEGESDTLTALALS 69
Query: 704 TAEKIL-SSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYL 844
+K+L S+G I++WD+ + KGH V G++ G L
Sbjct: 70 PDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLL 117
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 785
Score = 87.8 bits (208), Expect = 9e-18
Identities = 57/190 (30%), Positives = 94/190 (49%), Gaps = 3/190 (1%)
Frame = +2
Query: 296 EIFTAKFHPEGKHLASAGFDRQILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYT 472
++ F +GK LASAG D+++ IWN+ Q E+ + H I + F P+ + L T
Sbjct: 510 KVICCSFSYDGKLLASAGHDKKVFIWNMETLQVES--TPEEHAHIITDVRFRPNSTQLAT 567
Query: 473 GATDNTVAVWDV-PTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRN 649
+ D T+ +WD G ++ + GHA V S+ + ELL S +N I+ WD
Sbjct: 568 SSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASC 627
Query: 650 PVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKI-KGHTDTVTGLSLS 826
A +S T V F + L++ +N + ++DI NN + I KGH+ V + S
Sbjct: 628 VRAVKGAS---TQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWS 684
Query: 827 WDGAYLLSIN 856
+G + S++
Sbjct: 685 PNGELVASVS 694
Score = 58.8 bits (136), Expect = 5e-09
Identities = 45/200 (22%), Positives = 87/200 (43%), Gaps = 3/200 (1%)
Frame = +2
Query: 281 EGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGS 460
E H I +F P LA++ FD+ I IW+ + + GH +M + F P +
Sbjct: 547 EEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKT 606
Query: 461 HLYTGA-TDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDA 637
L ++N + WD+ + ++ +KG + V R + L +AS +NT+ ++D
Sbjct: 607 ELLCSCDSNNDIRFWDI-NASCVRAVKGAS---TQVRFQPRTGQFLAAAS-ENTVSIFDI 661
Query: 638 RKRNPVASF--DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVT 811
N + S V SV ++ E +++S ++ +K+W + + ++ +
Sbjct: 662 ENNNKRVNIFKGHSSNVHSVCWSPNGE-LVASVSEDAVKLWSLSSGDCIHELSNSGNKFH 720
Query: 812 GLSLSWDGAYLLSINGYTLV 871
+ LL I GY +
Sbjct: 721 SVVFHPSYPDLLVIGGYQAI 740
Score = 33.9 bits (74), Expect = 0.15
Identities = 26/135 (19%), Positives = 59/135 (43%), Gaps = 1/135 (0%)
Frame = +2
Query: 230 TSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNV-YGQCENVMV 406
T S+ N + + +GH + + + P G+ +AS D + +W++ G C + +
Sbjct: 655 TVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELS 713
Query: 407 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 586
G+ + F P L + +W+ + + GH +++++ +
Sbjct: 714 NSGN--KFHSVVFHPSYPDLLVIGGYQAIELWNT-MENKCMTVAGHECVISALAQS-PST 769
Query: 587 ELLVSASDDNTIKLW 631
++ SAS D ++K+W
Sbjct: 770 GVVASASHDKSVKIW 784
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 87.8 bits (208), Expect = 9e-18
Identities = 57/190 (30%), Positives = 94/190 (49%), Gaps = 3/190 (1%)
Frame = +2
Query: 296 EIFTAKFHPEGKHLASAGFDRQILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYT 472
++ F +GK LASAG D+++ IWN+ Q E+ + H I + F P+ + L T
Sbjct: 512 KVICCSFSYDGKLLASAGHDKKVFIWNMETLQVES--TPEEHAHIITDVRFRPNSTQLAT 569
Query: 473 GATDNTVAVWDV-PTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRN 649
+ D T+ +WD G ++ + GHA V S+ + ELL S +N I+ WD
Sbjct: 570 SSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASC 629
Query: 650 PVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKI-KGHTDTVTGLSLS 826
A +S T V F + L++ +N + ++DI NN + I KGH+ V + S
Sbjct: 630 VRAVKGAS---TQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWS 686
Query: 827 WDGAYLLSIN 856
+G + S++
Sbjct: 687 PNGELVASVS 696
Score = 58.8 bits (136), Expect = 5e-09
Identities = 45/200 (22%), Positives = 87/200 (43%), Gaps = 3/200 (1%)
Frame = +2
Query: 281 EGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGS 460
E H I +F P LA++ FD+ I IW+ + + GH +M + F P +
Sbjct: 549 EEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKT 608
Query: 461 HLYTGA-TDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDA 637
L ++N + WD+ + ++ +KG + V R + L +AS +NT+ ++D
Sbjct: 609 ELLCSCDSNNDIRFWDI-NASCVRAVKGAS---TQVRFQPRTGQFLAAAS-ENTVSIFDI 663
Query: 638 RKRNPVASF--DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVT 811
N + S V SV ++ E +++S ++ +K+W + + ++ +
Sbjct: 664 ENNNKRVNIFKGHSSNVHSVCWSPNGE-LVASVSEDAVKLWSLSSGDCIHELSNSGNKFH 722
Query: 812 GLSLSWDGAYLLSINGYTLV 871
+ LL I GY +
Sbjct: 723 SVVFHPSYPDLLVIGGYQAI 742
Score = 33.9 bits (74), Expect = 0.15
Identities = 26/135 (19%), Positives = 59/135 (43%), Gaps = 1/135 (0%)
Frame = +2
Query: 230 TSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNV-YGQCENVMV 406
T S+ N + + +GH + + + P G+ +AS D + +W++ G C + +
Sbjct: 657 TVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELS 715
Query: 407 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 586
G+ + F P L + +W+ + + GH +++++ +
Sbjct: 716 NSGN--KFHSVVFHPSYPDLLVIGGYQAIELWNT-MENKCMTVAGHECVISALAQS-PST 771
Query: 587 ELLVSASDDNTIKLW 631
++ SAS D ++K+W
Sbjct: 772 GVVASASHDKSVKIW 786
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 87.8 bits (208), Expect = 9e-18
Identities = 57/190 (30%), Positives = 94/190 (49%), Gaps = 3/190 (1%)
Frame = +2
Query: 296 EIFTAKFHPEGKHLASAGFDRQILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYT 472
++ F +GK LASAG D+++ IWN+ Q E+ + H I + F P+ + L T
Sbjct: 512 KVICCSFSYDGKLLASAGHDKKVFIWNMETLQVES--TPEEHAHIITDVRFRPNSTQLAT 569
Query: 473 GATDNTVAVWDV-PTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRN 649
+ D T+ +WD G ++ + GHA V S+ + ELL S +N I+ WD
Sbjct: 570 SSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASC 629
Query: 650 PVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKI-KGHTDTVTGLSLS 826
A +S T V F + L++ +N + ++DI NN + I KGH+ V + S
Sbjct: 630 VRAVKGAS---TQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWS 686
Query: 827 WDGAYLLSIN 856
+G + S++
Sbjct: 687 PNGELVASVS 696
Score = 58.8 bits (136), Expect = 5e-09
Identities = 45/200 (22%), Positives = 87/200 (43%), Gaps = 3/200 (1%)
Frame = +2
Query: 281 EGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGS 460
E H I +F P LA++ FD+ I IW+ + + GH +M + F P +
Sbjct: 549 EEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKT 608
Query: 461 HLYTGA-TDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDA 637
L ++N + WD+ + ++ +KG + V R + L +AS +NT+ ++D
Sbjct: 609 ELLCSCDSNNDIRFWDI-NASCVRAVKGAS---TQVRFQPRTGQFLAAAS-ENTVSIFDI 663
Query: 638 RKRNPVASF--DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVT 811
N + S V SV ++ E +++S ++ +K+W + + ++ +
Sbjct: 664 ENNNKRVNIFKGHSSNVHSVCWSPNGE-LVASVSEDAVKLWSLSSGDCIHELSNSGNKFH 722
Query: 812 GLSLSWDGAYLLSINGYTLV 871
+ LL I GY +
Sbjct: 723 SVVFHPSYPDLLVIGGYQAI 742
Score = 33.9 bits (74), Expect = 0.15
Identities = 26/135 (19%), Positives = 59/135 (43%), Gaps = 1/135 (0%)
Frame = +2
Query: 230 TSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNV-YGQCENVMV 406
T S+ N + + +GH + + + P G+ +AS D + +W++ G C + +
Sbjct: 657 TVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELS 715
Query: 407 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 586
G+ + F P L + +W+ + + GH +++++ +
Sbjct: 716 NSGN--KFHSVVFHPSYPDLLVIGGYQAIELWNT-MENKCMTVAGHECVISALAQS-PST 771
Query: 587 ELLVSASDDNTIKLW 631
++ SAS D ++K+W
Sbjct: 772 GVVASASHDKSVKIW 786
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 87.8 bits (208), Expect = 9e-18
Identities = 57/190 (30%), Positives = 94/190 (49%), Gaps = 3/190 (1%)
Frame = +2
Query: 296 EIFTAKFHPEGKHLASAGFDRQILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYT 472
++ F +GK LASAG D+++ IWN+ Q E+ + H I + F P+ + L T
Sbjct: 512 KVICCSFSYDGKLLASAGHDKKVFIWNMETLQVES--TPEEHAHIITDVRFRPNSTQLAT 569
Query: 473 GATDNTVAVWDV-PTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRN 649
+ D T+ +WD G ++ + GHA V S+ + ELL S +N I+ WD
Sbjct: 570 SSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASC 629
Query: 650 PVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKI-KGHTDTVTGLSLS 826
A +S T V F + L++ +N + ++DI NN + I KGH+ V + S
Sbjct: 630 VRAVKGAS---TQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWS 686
Query: 827 WDGAYLLSIN 856
+G + S++
Sbjct: 687 PNGELVASVS 696
Score = 58.8 bits (136), Expect = 5e-09
Identities = 45/200 (22%), Positives = 87/200 (43%), Gaps = 3/200 (1%)
Frame = +2
Query: 281 EGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGS 460
E H I +F P LA++ FD+ I IW+ + + GH +M + F P +
Sbjct: 549 EEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKT 608
Query: 461 HLYTGA-TDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDA 637
L ++N + WD+ + ++ +KG + V R + L +AS +NT+ ++D
Sbjct: 609 ELLCSCDSNNDIRFWDI-NASCVRAVKGAS---TQVRFQPRTGQFLAAAS-ENTVSIFDI 663
Query: 638 RKRNPVASF--DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVT 811
N + S V SV ++ E +++S ++ +K+W + + ++ +
Sbjct: 664 ENNNKRVNIFKGHSSNVHSVCWSPNGE-LVASVSEDAVKLWSLSSGDCIHELSNSGNKFH 722
Query: 812 GLSLSWDGAYLLSINGYTLV 871
+ LL I GY +
Sbjct: 723 SVVFHPSYPDLLVIGGYQAI 742
Score = 33.9 bits (74), Expect = 0.15
Identities = 26/135 (19%), Positives = 59/135 (43%), Gaps = 1/135 (0%)
Frame = +2
Query: 230 TSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNV-YGQCENVMV 406
T S+ N + + +GH + + + P G+ +AS D + +W++ G C + +
Sbjct: 657 TVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELS 715
Query: 407 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 586
G+ + F P L + +W+ + + GH +++++ +
Sbjct: 716 NSGN--KFHSVVFHPSYPDLLVIGGYQAIELWNT-MENKCMTVAGHECVISALAQS-PST 771
Query: 587 ELLVSASDDNTIKLW 631
++ SAS D ++K+W
Sbjct: 772 GVVASASHDKSVKIW 786
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 87.8 bits (208), Expect = 9e-18
Identities = 57/190 (30%), Positives = 94/190 (49%), Gaps = 3/190 (1%)
Frame = +2
Query: 296 EIFTAKFHPEGKHLASAGFDRQILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYT 472
++ F +GK LASAG D+++ IWN+ Q E+ + H I + F P+ + L T
Sbjct: 512 KVICCSFSYDGKLLASAGHDKKVFIWNMETLQVES--TPEEHAHIITDVRFRPNSTQLAT 569
Query: 473 GATDNTVAVWDV-PTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRN 649
+ D T+ +WD G ++ + GHA V S+ + ELL S +N I+ WD
Sbjct: 570 SSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASC 629
Query: 650 PVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKI-KGHTDTVTGLSLS 826
A +S T V F + L++ +N + ++DI NN + I KGH+ V + S
Sbjct: 630 VRAVKGAS---TQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWS 686
Query: 827 WDGAYLLSIN 856
+G + S++
Sbjct: 687 PNGELVASVS 696
Score = 58.8 bits (136), Expect = 5e-09
Identities = 45/200 (22%), Positives = 87/200 (43%), Gaps = 3/200 (1%)
Frame = +2
Query: 281 EGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGS 460
E H I +F P LA++ FD+ I IW+ + + GH +M + F P +
Sbjct: 549 EEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKT 608
Query: 461 HLYTGA-TDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDA 637
L ++N + WD+ + ++ +KG + V R + L +AS +NT+ ++D
Sbjct: 609 ELLCSCDSNNDIRFWDI-NASCVRAVKGAS---TQVRFQPRTGQFLAAAS-ENTVSIFDI 663
Query: 638 RKRNPVASF--DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVT 811
N + S V SV ++ E +++S ++ +K+W + + ++ +
Sbjct: 664 ENNNKRVNIFKGHSSNVHSVCWSPNGE-LVASVSEDAVKLWSLSSGDCIHELSNSGNKFH 722
Query: 812 GLSLSWDGAYLLSINGYTLV 871
+ LL I GY +
Sbjct: 723 SVVFHPSYPDLLVIGGYQAI 742
Score = 33.9 bits (74), Expect = 0.15
Identities = 26/135 (19%), Positives = 59/135 (43%), Gaps = 1/135 (0%)
Frame = +2
Query: 230 TSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNV-YGQCENVMV 406
T S+ N + + +GH + + + P G+ +AS D + +W++ G C + +
Sbjct: 657 TVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELS 715
Query: 407 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 586
G+ + F P L + +W+ + + GH +++++ +
Sbjct: 716 NSGN--KFHSVVFHPSYPDLLVIGGYQAIELWNT-MENKCMTVAGHECVISALAQS-PST 771
Query: 587 ELLVSASDDNTIKLW 631
++ SAS D ++K+W
Sbjct: 772 GVVASASHDKSVKIW 786
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 87.4 bits (207), Expect = 1e-17
Identities = 50/177 (28%), Positives = 95/177 (53%), Gaps = 3/177 (1%)
Frame = +2
Query: 248 TSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGA 427
++ L A ++ +GH ++ A+F P G + AS DR IW++ + + + +M GH
Sbjct: 446 STKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSM-DRIQPLRIMAGH--- 501
Query: 428 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 607
+ + + P+ +++ TG++D TV +WDV TG ++ GH + V S++ + G + S
Sbjct: 502 LSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDG-RYMASGD 560
Query: 608 DDNTIKLWD---ARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNN 769
+D TI +WD AR P+ +S V S+ ++ + S D +K+WD+ ++
Sbjct: 561 EDGTIMMWDLSTARCITPLMGHNSC--VWSLSYSGEGSLLASGSADCTVKLWDVTSS 615
Score = 84.2 bits (199), Expect = 1e-16
Identities = 52/193 (26%), Positives = 85/193 (44%), Gaps = 1/193 (0%)
Frame = +2
Query: 275 LLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPD 454
LL GH G +++A F P G + S+ D I +W+ N++ KGH + FSP
Sbjct: 413 LLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNA-NLVCYKGHNYPVWDAQFSPF 471
Query: 455 GSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD 634
G + + + D T +W + ++ + GH + V+ + + S D T++LWD
Sbjct: 472 GHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDWHPNC----NYIATGSSDKTVRLWD 527
Query: 635 ARKRNPVASF-DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVT 811
+ V F V S+ + + S D I MWD+ + + GH V
Sbjct: 528 VQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVW 587
Query: 812 GLSLSWDGAYLLS 850
LS S +G+ L S
Sbjct: 588 SLSYSGEGSLLAS 600
Score = 60.5 bits (140), Expect = 2e-09
Identities = 28/102 (27%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFS 448
+ + GH+ + + P+G+++AS D I++W++ + + GH + L +S
Sbjct: 534 VRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDL-STARCITPLMGHNSCVWSLSYS 592
Query: 449 PDGSHLYTGATDNTVAVWDVPTGTRIKKLK---GHANFVNSV 565
+GS L +G+ D TV +WDV + T++ K + G++N + S+
Sbjct: 593 GEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNGNSNRLRSL 634
Score = 39.5 bits (88), Expect = 0.003
Identities = 36/135 (26%), Positives = 56/135 (41%)
Frame = +2
Query: 446 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 625
S DGS + G +D+++ VWD+ A + SGA L + +D +
Sbjct: 361 SHDGSLVAGGFSDSSIKVWDM------------AKIGQAGSGA------LQAENDSSDQS 402
Query: 626 LWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDT 805
+ +R+ S PV S F+ + +LSS D I++W + N + KGH
Sbjct: 403 IGPNGRRSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYP 462
Query: 806 VTGLSLSWDGAYLLS 850
V S G Y S
Sbjct: 463 VWDAQFSPFGHYFAS 477
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 87.4 bits (207), Expect = 1e-17
Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 1/140 (0%)
Frame = +2
Query: 392 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 571
+N V++GH G + + F P TG+ D T+ +WDV TG L GH V ++
Sbjct: 167 KNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAV 226
Query: 572 ARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIK 748
+ R + SA DD +K WD + + S+ V + + T + +L+ G D+V +
Sbjct: 227 SNR-HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCR 285
Query: 749 MWDIRNNQIXLKIKGHTDTV 808
+WDIR + GH +TV
Sbjct: 286 VWDIRTKMQIFALSGHDNTV 305
Score = 70.9 bits (166), Expect = 1e-12
Identities = 41/184 (22%), Positives = 82/184 (44%), Gaps = 1/184 (0%)
Frame = +2
Query: 275 LLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPD 454
+++GH G + + F P + + DR I IW+V + + GH + L S
Sbjct: 171 VIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLK-LTLTGHIEQVRGLAVSNR 229
Query: 455 GSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD 634
+++++ D V WD+ I+ GH + V ++ ++L++ D+ ++WD
Sbjct: 230 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLA-LHPTLDVLLTGGRDSVCRVWD 288
Query: 635 ARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVT 811
R + + + V SV T ++++ D IK WD+R + + H +V
Sbjct: 289 IRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVR 348
Query: 812 GLSL 823
++L
Sbjct: 349 AMTL 352
Score = 66.1 bits (154), Expect = 3e-11
Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 1/160 (0%)
Frame = +2
Query: 272 MLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSP 451
+ L GH ++ ++ SAG D+Q+ W++ Q + + GH + L P
Sbjct: 212 LTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLE-QNKVIRSYHGHLSGVYCLALHP 270
Query: 452 DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLW 631
L TG D+ VWD+ T +I L GH N V SV P+ +V+ S D TIK W
Sbjct: 271 TLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQ-VVTGSHDTTIKFW 329
Query: 632 DARKRNPVASF-DSSYPVTSVLFNDTAEKILSSGVDNVIK 748
D R +++ V ++ + S+ DN K
Sbjct: 330 DLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNTKK 369
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +2
Query: 680 VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
V SV F+ + E + D IK+WD+ + L + GH + V GL++S Y+ S
Sbjct: 179 VRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFS 235
Score = 41.5 bits (93), Expect = 7e-04
Identities = 33/173 (19%), Positives = 71/173 (41%), Gaps = 11/173 (6%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNV-YGQCENVMVMKGHTGAIMQLCF 445
I L GH + + P + + D I W++ YG + + + H ++ +
Sbjct: 295 IFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYG--KTMSTLTHHKKSVRAMTL 352
Query: 446 SPDGSHLYTGATDNTVAVWDVPTGTRI-KKLKGHANFVNSVSGARRGPELLVSASDDNTI 622
P + + + DNT + +P G L +N+++ G ++V+ D+ +I
Sbjct: 353 HPKENAFASASADNT-KKFSLPKGEFCHNMLSQQKTIINAMAVNEDG--VMVTGGDNGSI 409
Query: 623 KLWDARKRNPV---------ASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 754
WD + + S +S + + +++T ++++ D IKMW
Sbjct: 410 WFWDWKSGHSFQQSETIVQPGSLESEAGIYAACYDNTGSRLVTCEADKTIKMW 462
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 1/109 (0%)
Frame = +2
Query: 500 WDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP 679
W P + ++GH +V SV+ E + S D TIK+WD +
Sbjct: 162 WHAPW-KNYRVIQGHLGWVRSVAFDPSN-EWFCTGSADRTIKIWDVATGVLKLTLTGHIE 219
Query: 680 -VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSL 823
V + ++ + S+G D +K WD+ N++ GH V L+L
Sbjct: 220 QVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLAL 268
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 85.4 bits (202), Expect = 5e-17
Identities = 46/123 (37%), Positives = 70/123 (56%), Gaps = 1/123 (0%)
Frame = +2
Query: 266 PIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWN-VYGQCENVMVMKGHTGAIMQLC 442
P L GHQ + F P+GK +ASA FD+ + +WN + GQ V V +GH G + Q+
Sbjct: 352 PKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQF--VTVFRGHVGPVYQVS 409
Query: 443 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 622
+S D L +G+ D+T+ +W++ T + L GHA+ V +V + G E +VS D +
Sbjct: 410 WSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDG-EKVVSGGKDRVL 468
Query: 623 KLW 631
KLW
Sbjct: 469 KLW 471
Score = 85.0 bits (201), Expect = 6e-17
Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 6/189 (3%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDG 457
+ GH + F P+GK LAS D + +W++Y + + KGH ++ + +SPDG
Sbjct: 105 IAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETP-LFTCKGHKNWVLTVAWSPDG 163
Query: 458 SHLYTGATDNTVAVWDVPTG-TRIKKLKGHANFVNSVSGA---RRGP-ELLVSASDDNTI 622
HL +G+ + W+ G L GH ++ +S P V++S D
Sbjct: 164 KHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDA 223
Query: 623 KLWD-ARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHT 799
++WD K++ + + VT V + I + D IKMW+ ++ ++KGH
Sbjct: 224 RIWDITLKKSIICLSGHTLAVTCVKWGGDG-IIYTGSQDCTIKMWETTQGKLIRELKGHG 282
Query: 800 DTVTGLSLS 826
+ L+LS
Sbjct: 283 HWINSLALS 291
Score = 71.3 bits (167), Expect = 8e-13
Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Frame = +2
Query: 413 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 592
GH A++ + FSPDG L +G+ D TV +WD+ T T + KGH N+V +V+ + G
Sbjct: 107 GHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKH- 165
Query: 593 LVSASDDNTIKLWDARK----RNPVASFDSSYPVTS---VLFNDTAEKILSSGVDNVIKM 751
LVS S I W+ +K +P+ S V + + ++S D ++
Sbjct: 166 LVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARI 225
Query: 752 WDIRNNQIXLKIKGHTDTVTGLSLSWDG 835
WDI + + + GHT VT + DG
Sbjct: 226 WDITLKKSIICLSGHTLAVTCVKWGGDG 253
Score = 70.1 bits (164), Expect = 2e-12
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 1/143 (0%)
Frame = +2
Query: 329 KHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 508
+ L S D + +W + + GH + + FSPDG + + + D +V +W+
Sbjct: 330 ERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNG 389
Query: 509 PTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDS-SYPVT 685
TG + +GH V VS + LL+S S D+T+K+W+ R + + V
Sbjct: 390 ITGQFVTVFRGHVGPVYQVSWSADS-RLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVF 448
Query: 686 SVLFNDTAEKILSSGVDNVIKMW 754
+V ++ EK++S G D V+K+W
Sbjct: 449 AVDWSPDGEKVVSGGKDRVLKLW 471
Score = 64.5 bits (150), Expect = 9e-11
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Frame = +2
Query: 464 LYTGATDNTVAVWDVPTGTRIKK-LKGHANFVNSVSGARRGPELLVSASDDNTIKLWDAR 640
L +G+ D T+ +W+ + KK L GH VN V + G + + SAS D +++LW+
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDG-KWIASASFDKSVRLWNGI 390
Query: 641 KRNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGL 817
V F PV V ++ + +LS D+ +K+W+IR ++ + GH D V +
Sbjct: 391 TGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAV 450
Query: 818 SLSWDGAYLLS 850
S DG ++S
Sbjct: 451 DWSPDGEKVVS 461
Score = 60.5 bits (140), Expect = 2e-09
Identities = 43/175 (24%), Positives = 88/175 (50%), Gaps = 1/175 (0%)
Frame = +2
Query: 329 KHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 508
+ ++ D IW++ + ++++ + GHT A+ + + DG +YTG+ D T+ +W+
Sbjct: 212 RRFVTSSKDGDARIWDITLK-KSIICLSGHTLAVTCVKWGGDGI-IYTGSQDCTIKMWET 269
Query: 509 PTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTS 688
G I++LKGH +++NS+ A +L + + D+T + + + A Y T
Sbjct: 270 TQGKLIRELKGHGHWINSL--ALSTEYVLRTGAFDHTGRQYPPNEEKQKAL--ERYNKTK 325
Query: 689 VLFNDTAEKILSSGVDNVIKMWDIR-NNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
D+ E+++S D + +W+ + Q ++ GH V + S DG ++ S
Sbjct: 326 ---GDSPERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIAS 377
Score = 55.6 bits (128), Expect = 4e-08
Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 6/129 (4%)
Frame = +2
Query: 266 PIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWN-VYGQCENVMVMKGHTGAIMQLC 442
P+ +GH+ + T + P+GKHL S +I WN G+ E + GH I +
Sbjct: 143 PLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEG-SPLTGHKKWITGIS 201
Query: 443 FSP-----DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 607
+ P T + D +WD+ I L GH V V G ++ + S
Sbjct: 202 WEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWG--GDGIIYTGS 259
Query: 608 DDNTIKLWD 634
D TIK+W+
Sbjct: 260 QDCTIKMWE 268
Score = 34.7 bits (76), Expect = 0.086
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +2
Query: 680 VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
V V F+ +++ S D +++WD+ KGH + V ++ S DG +L+S
Sbjct: 112 VLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVS 168
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 84.2 bits (199), Expect = 1e-16
Identities = 56/195 (28%), Positives = 97/195 (49%), Gaps = 3/195 (1%)
Frame = +2
Query: 275 LLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPD 454
+L+GH+G + A+F+ +G + + G DR I +WN + + + K H + + + D
Sbjct: 13 ILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPH-RGILIKTYKSHGREVRDVHVTSD 71
Query: 455 GSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD 634
+ + D V WDV TG I+K +GH VN+V ++VSA D ++++WD
Sbjct: 72 NAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVK-FNDSSSVVVSAGFDRSLRVWD 130
Query: 635 ARKRN--PVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDT 805
R + PV D+ V SV+ T +I+ VD ++ +D+R + G
Sbjct: 131 CRSHSVEPVQIIDTFLDTVMSVVLTKT--EIIGGSVDGTVRTFDMRIGREMSDNLG--QP 186
Query: 806 VTGLSLSWDGAYLLS 850
V +S+S DG +L+
Sbjct: 187 VNCISISNDGNCVLA 201
Score = 60.5 bits (140), Expect = 2e-09
Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 5/189 (2%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYG-QCENVMVMKGHTGAIMQLCF 445
I GH GE+ KF+ + SAGFDR + +W+ E V ++ +M +
Sbjct: 95 IRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVL 154
Query: 446 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 625
+ + + G+ D TV +D+ G + G VN +S + G +++ D+T++
Sbjct: 155 TK--TEIIGGSVDGTVRTFDMRIGREMSDNLGQP--VNCISISNDG-NCVLAGCLDSTLR 209
Query: 626 LWDARKRNPVASF----DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKG 793
L D + + S+ L N A ++ D ++ WD+ + ++ K +
Sbjct: 210 LLDRTTGELLQVYKGHISKSFKTDCCLTNSDAH-VIGGSEDGLVFFWDLVDAKVLSKFRA 268
Query: 794 HTDTVTGLS 820
H VT +S
Sbjct: 269 HDLVVTSVS 277
Score = 54.4 bits (125), Expect = 1e-07
Identities = 48/226 (21%), Positives = 96/226 (42%), Gaps = 13/226 (5%)
Frame = +2
Query: 158 ASLLPSKRVR----HEISVVGTREKA----VVTSSVPRTSNLYAP-----IMLLEGHQGE 298
A+ LP+K HE +V+ R +T RT L+ P I + H E
Sbjct: 3 ATELPTKEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGRE 62
Query: 299 IFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGA 478
+ + S G DRQ+ W+V + +GH G + + F+ S + +
Sbjct: 63 VRDVHVTSDNAKFCSCGGDRQVYYWDV-STGRVIRKFRGHDGEVNAVKFNDSSSVVVSAG 121
Query: 479 TDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVA 658
D ++ VWD + + ++ ++ F+++V ++ S D T++ +D R +
Sbjct: 122 FDRSLRVWDCRSHS-VEPVQIIDTFLDTVMSVVLTKTEIIGGSVDGTVRTFDMRIGREM- 179
Query: 659 SFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGH 796
S + PV + ++ +L+ +D+ +++ D ++ KGH
Sbjct: 180 SDNLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGH 225
Score = 45.6 bits (103), Expect = 5e-05
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Frame = +2
Query: 437 LCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL-LVSASDD 613
+ S DG+ + G D+T+ + D TG ++ KGH + + ++ S+D
Sbjct: 190 ISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGGSED 249
Query: 614 NTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMW 754
+ WD ++ F + VTSV ++ + +L+S VD I++W
Sbjct: 250 GLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGTIRVW 297
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +2
Query: 392 ENVMVMKGHTGAIMQL--CFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV 565
E + V KGH + C + +H+ G+ D V WD+ + K + H V SV
Sbjct: 217 ELLQVYKGHISKSFKTDCCLTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSV 276
Query: 566 SGARRGPELLVSASDDNTIKLW 631
S + + ++++S D TI++W
Sbjct: 277 SYHPK-EDCMLTSSVDGTIRVW 297
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/60 (25%), Positives = 24/60 (40%)
Frame = +2
Query: 680 VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLSING 859
V + FN L+ G D I++W+ + K H V + ++ D A S G
Sbjct: 21 VLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAKFCSCGG 80
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 84.2 bits (199), Expect = 1e-16
Identities = 48/191 (25%), Positives = 90/191 (47%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDG 457
+ H+G + F L + G DR + +W+ + + G G I+ + + D
Sbjct: 227 IHAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDT-NSGTLIKSLYGSLGNILDMAVTHDN 285
Query: 458 SHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDA 637
+ + N + VWDV +G L GH + V +V ++ +VSA+ D TIKLWD
Sbjct: 286 KSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDL 345
Query: 638 RKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGL 817
K + + ++ + + S +D +++WDI+ ++ ++ GH+ VT +
Sbjct: 346 HKGYCTNTVLFTSNCNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSV 405
Query: 818 SLSWDGAYLLS 850
SLS +G +L+
Sbjct: 406 SLSRNGNRILT 416
Score = 77.4 bits (182), Expect = 1e-14
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 7/193 (3%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHP-EGKHLASAGFDRQILIWNVY-GQCENVMVMKGHTGAIMQLCFSP 451
L GH ++ +H+ SA +DR I +W+++ G C N ++ + AI C S
Sbjct: 311 LTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTSNCNAI---CLSI 367
Query: 452 DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLW 631
DG +++G D + +WD+ TG + ++ GH++ V SVS +R G +L S DN ++
Sbjct: 368 DGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGR-DNVHNVF 426
Query: 632 DARKRNPVASFDSSYPVTSVLFNDTA-----EKILSSGVDNVIKMWDIRNNQIXLKIKGH 796
D R + +S + ++ + + + + D + +W + I +K
Sbjct: 427 DTRTLEICGTLRASGNRLASNWSRSCISPDDDYVAAGSADGSVHVWSLSKGNIVSILKEQ 486
Query: 797 TDTVTGLSLSWDG 835
T + L SW G
Sbjct: 487 TSPI--LCCSWSG 497
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 84.2 bits (199), Expect = 1e-16
Identities = 42/160 (26%), Positives = 82/160 (51%), Gaps = 1/160 (0%)
Frame = +2
Query: 341 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGT 520
+ G D ++ +W + G+ ++M + GHT A+ + F + GA+ + +WDV
Sbjct: 33 TGGDDYKVNLWAI-GKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAK 91
Query: 521 RIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLF 697
++ GH + ++V G E L S S D +K+WD RK+ + ++ S ++++ F
Sbjct: 92 MVRAFTGHRSNCSAVEFHPFG-EFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRF 150
Query: 698 NDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGL 817
++S G+DNV+K+WD+ ++ + K H + L
Sbjct: 151 TPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSL 190
Score = 80.2 bits (189), Expect = 2e-15
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 2/159 (1%)
Frame = +2
Query: 284 GHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQ-CENVMVMKGHTGAIMQLCFSPDGS 460
GH+ +FHP G+ LAS D + IW++ + C + KGH+ I + F+PDG
Sbjct: 98 GHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGC--IQTYKGHSRGISTIRFTPDGR 155
Query: 461 HLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDAR 640
+ +G DN V VWD+ G + + K H + S+ LL + S D T+K WD
Sbjct: 156 WVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLD-FHPLEFLLATGSADRTVKFWDLE 214
Query: 641 KRNPVASF-DSSYPVTSVLFNDTAEKILSSGVDNVIKMW 754
+ S + V S+ F+ + L G+D+ +K++
Sbjct: 215 TFELIGSTRPEATGVRSIKFHPDG-RTLFCGLDDSLKVY 252
Score = 62.5 bits (145), Expect = 4e-10
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 3/148 (2%)
Frame = +2
Query: 416 HTGAIMQLCFSPDGSHLY-TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 592
H+ + L S L+ TG D V +W + T + L GH + V+SV A E+
Sbjct: 14 HSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSV--AFDSAEV 71
Query: 593 LVSA-SDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIKMWDIRN 766
LV A + IKLWD + V +F ++V F+ E + S D +K+WDIR
Sbjct: 72 LVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRK 131
Query: 767 NQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
KGH+ ++ + + DG +++S
Sbjct: 132 KGCIQTYKGHSRGISTIRFTPDGRWVVS 159
Score = 59.3 bits (137), Expect = 3e-09
Identities = 36/122 (29%), Positives = 53/122 (43%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFS 448
I +GH I T +F P+G+ + S G D + +W++ + + K H G I L F
Sbjct: 135 IQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAG-KLLHEFKFHEGPIRSLDFH 193
Query: 449 PDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKL 628
P L TG+ D TV WD+ T I + A V S+ G L D +
Sbjct: 194 PLEFLLATGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHPDGRTLFCGLDDSLKVYS 253
Query: 629 WD 634
W+
Sbjct: 254 WE 255
Score = 49.6 bits (113), Expect = 3e-06
Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Frame = +2
Query: 515 GTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASF-DSSYPVTSV 691
G ++++ H+ VN +S ++ L ++ DD + LW K + S + V SV
Sbjct: 5 GYKLQEFLAHSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSV 64
Query: 692 LFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
F+ +L+ VIK+WD+ ++ GH + + G +L S
Sbjct: 65 AFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLAS 117
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 83.0 bits (196), Expect = 2e-16
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 2/164 (1%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQ-CENVMVMKGHTGAIMQLCF 445
+ L GH+ + FHP G+ AS D + IW++ + C + KGHT + L F
Sbjct: 187 VRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGC--IHTYKGHTRGVNVLRF 244
Query: 446 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 625
+PDG + +G DN V VWD+ G + + K H + S+ LL + S D T+K
Sbjct: 245 TPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLD-FHPHEFLLATGSADKTVK 303
Query: 626 LWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMW 754
WD + S + + V + FN + +L G+ +K++
Sbjct: 304 FWDLETFELIGSGGTETTGVRCLTFNPDGKSVL-CGLQESLKIF 346
Score = 80.6 bits (190), Expect = 1e-15
Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 1/162 (0%)
Frame = +2
Query: 335 LASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 514
L + G D ++ +W + G+ ++ + GH+ I + F + GA T+ +WD+
Sbjct: 125 LVTGGEDHKVNLWAI-GKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEE 183
Query: 515 GTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVL 694
++ L GH + SV+ G E S S D +K+WD RK+ + ++ +VL
Sbjct: 184 AKVVRTLTGHRSNCVSVNFHPFG-EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVL 242
Query: 695 -FNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGL 817
F I+S G DNV+K+WD+ ++ + K H + L
Sbjct: 243 RFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSL 284
Score = 65.3 bits (152), Expect = 5e-11
Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 3/148 (2%)
Frame = +2
Query: 416 HTGAIMQLCFSPDGSH-LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS-GARRGPE 589
H+ A+ L S L TG D+ V +W + I L GH++ ++SV+ A G
Sbjct: 108 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEG-- 165
Query: 590 LLVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIKMWDIRN 766
L+ + + TIKLWD + V + SV F+ E S +D +K+WDIR
Sbjct: 166 LVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRK 225
Query: 767 NQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
KGHT V L + DG +++S
Sbjct: 226 KGCIHTYKGHTRGVNVLRFTPDGRWIVS 253
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 83.0 bits (196), Expect = 2e-16
Identities = 46/143 (32%), Positives = 80/143 (55%), Gaps = 1/143 (0%)
Frame = +2
Query: 407 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 586
+KGHTG + + S D + +G+ D +V VWD T +++LKGH + V+ V
Sbjct: 895 LKGHTGTVRAI--SSDRGKIVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVK--MLSG 950
Query: 587 ELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDIR 763
E +++A+ D T+K+WD R VA+ S + S+ ++D+ + ++G D V +WDIR
Sbjct: 951 ERVLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIR 1010
Query: 764 NNQIXLKIKGHTDTVTGLSLSWD 832
+ + K+KGHT + + + D
Sbjct: 1011 SGKQMHKLKGHTKWIRSIRMVED 1033
Score = 60.1 bits (139), Expect = 2e-09
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 14/160 (8%)
Frame = +2
Query: 395 NVMVMKGHTGAIMQL--------CF----SPDGSHLYTGATDNTVAVWDVP-TGTRIK-K 532
NV V+KGH GA+ L C D +G+TD V +WD G+ ++
Sbjct: 835 NVRVLKGHGGAVTALHSVTRREVCDLVGDREDAGFFISGSTDCLVKIWDPSLRGSELRAT 894
Query: 533 LKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAE 712
LKGH V ++S + RG +VS SDD ++ +WD + + S + + E
Sbjct: 895 LKGHTGTVRAIS-SDRGK--IVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKMLSGE 951
Query: 713 KILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWD 832
++L++ D +KMWD+R + + + + LSL +D
Sbjct: 952 RVLTAAHDGTVKMWDVRTDMCVATVGRCSSAI--LSLEYD 989
Score = 42.3 bits (95), Expect = 4e-04
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 1/154 (0%)
Frame = +2
Query: 335 LASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 514
LA+AG D IW++ + + +KGHT I + D L TG+ D T VW V
Sbjct: 995 LAAAGRDTVANIWDIRSG-KQMHKLKGHTKWIRSIRMVEDT--LITGSDDWTARVWSVSR 1051
Query: 515 GTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVL 694
G+ L HA V SV + + +++ S D ++ W+ + + + +S+L
Sbjct: 1052 GSCDAVLACHAGPVQSVEYS-PFDKGIITGSADGLLRFWENDEGGIKCVKNITLHSSSIL 1110
Query: 695 FNDTAEKILSSG-VDNVIKMWDIRNNQIXLKIKG 793
+ E L G DN + ++ R + K+ G
Sbjct: 1111 SINAGENWLGIGAADNSMSLFH-RPSNAGTKVSG 1143
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 82.2 bits (194), Expect = 4e-16
Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 3/184 (1%)
Frame = +2
Query: 314 FHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTV 493
F +GK LASAG D++ ++W + ++ HT I + FSP L T + D TV
Sbjct: 659 FSSDGKMLASAGHDKKAVLWYT-DTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTV 717
Query: 494 AVWDVPT-GTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDS 670
VWD G ++ GH++ V S+ +L+ S +DN I+ W + +
Sbjct: 718 RVWDADNKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSINNGSCTRVYKG 777
Query: 671 SYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWD--GAYL 844
T + F K L++ N++ + D+ I ++GH + + S+ WD G +L
Sbjct: 778 G--STQIRFQPRVGKYLAASSANLVNVLDVETQAIRHSLQGHANPIN--SVCWDPSGDFL 833
Query: 845 LSIN 856
S++
Sbjct: 834 ASVS 837
Score = 54.4 bits (125), Expect = 1e-07
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 2/167 (1%)
Frame = +2
Query: 266 PIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCF 445
P LE H I +F P LA++ FD+ + +W+ + ++ GH+ + L F
Sbjct: 685 PKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDF 744
Query: 446 SPDGSHLYTGA-TDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 622
P L DN + W + G+ + KG + + R G L +AS N +
Sbjct: 745 HPIKDDLICSCDNDNEIRYWSINNGSCTRVYKGGSTQIR--FQPRVGKYL--AASSANLV 800
Query: 623 KLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDI 760
+ D + S + P+ SV + D + L+S ++++K+W +
Sbjct: 801 NVLDVETQAIRHSLQGHANPINSVCW-DPSGDFLASVSEDMVKVWTL 846
Score = 37.5 bits (83), Expect = 0.012
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 5/123 (4%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNV----YGQCENVMVMKGHTGAIMQLC- 442
L+GH I + + P G LAS D + +W + G+C + + G+ Q C
Sbjct: 814 LQGHANPINSVCWDPSGDFLASVSED-MVKVWTLGTGSEGECVHELSCNGNK---FQSCV 869
Query: 443 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 622
F P L ++ +W++ + + L H + S++ L+ SAS D +
Sbjct: 870 FHPAYPSLLVIGCYQSLELWNM-SENKTMTLPAHEGLITSLA-VSTATGLVASASHDKLV 927
Query: 623 KLW 631
KLW
Sbjct: 928 KLW 930
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 81.8 bits (193), Expect = 6e-16
Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 1/148 (0%)
Frame = +2
Query: 392 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 571
+N V++GH G + + F P TG+ D T+ +WDV TG L GH V ++
Sbjct: 161 KNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAV 220
Query: 572 ARRGPELLVSASDDNTIKLWDARKRNPVASFDSS-YPVTSVLFNDTAEKILSSGVDNVIK 748
+ R + SA DD +K WD + + S+ + V + + T + +L+ G D+V +
Sbjct: 221 SNR-HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCR 279
Query: 749 MWDIRNNQIXLKIKGHTDTVTGLSLSWD 832
+WDIR + +D + L+ D
Sbjct: 280 VWDIRTKMQIFVLPHDSDVFSVLARPTD 307
Score = 81.4 bits (192), Expect = 8e-16
Identities = 45/183 (24%), Positives = 84/183 (45%)
Frame = +2
Query: 275 LLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPD 454
+L+GH G + + F P + + DR I IW+V + + GH G + L S
Sbjct: 165 VLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLK-LTLTGHIGQVRGLAVSNR 223
Query: 455 GSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD 634
+++++ D V WD+ I+ GH + V ++ +++++ D+ ++WD
Sbjct: 224 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLA-LHPTLDVVLTGGRDSVCRVWD 282
Query: 635 ARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTG 814
R + + V SVL T ++++ D+ IK WD+R + I H TV
Sbjct: 283 IRTKMQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRA 342
Query: 815 LSL 823
++L
Sbjct: 343 MAL 345
Score = 62.5 bits (145), Expect = 4e-10
Identities = 46/189 (24%), Positives = 84/189 (44%), Gaps = 1/189 (0%)
Frame = +2
Query: 272 MLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSP 451
+ L GH G++ ++ SAG D+Q+ W++ Q + + GH + L P
Sbjct: 206 LTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDL-EQNKVIRSYHGHLHGVYCLALHP 264
Query: 452 DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLW 631
+ TG D+ VWD+ T +I L H + V SV P+ +++ S D+TIK W
Sbjct: 265 TLDVVLTGGRDSVCRVWDIRTKMQIFVLP-HDSDVFSVLARPTDPQ-VITGSHDSTIKFW 322
Query: 632 DARKRNPVASF-DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTV 808
D R +A+ + V ++ + +S+ DN+ K + + D +
Sbjct: 323 DLRYGKSMATITNHKKTVRAMALHPKENDFVSASADNIKKFSLPKGEFCHNMLSLQRDII 382
Query: 809 TGLSLSWDG 835
++++ DG
Sbjct: 383 NAVAVNEDG 391
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +2
Query: 680 VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
V SV F+ + E + D IK+WD+ + L + GH V GL++S Y+ S
Sbjct: 173 VRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFS 229
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 81.0 bits (191), Expect = 1e-15
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 2/164 (1%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQ-CENVMVMKGHTGAIMQLCF 445
+ L GH+ + FHP G+ AS D + IW++ + C + KGHT + L F
Sbjct: 94 VRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGC--IHTYKGHTRGVNVLRF 151
Query: 446 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 625
+PDG + +G DN V VWD+ G + + K H + S+ LL + S D T+K
Sbjct: 152 TPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLD-FHPHEFLLATGSADRTVK 210
Query: 626 LWDARKRNPVAS-FDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 754
WD + S + V + FN + +L G+ +K++
Sbjct: 211 FWDLETFELIGSGGPETAGVRCLSFNPDGKTVL-CGLQESLKIF 253
Score = 79.4 bits (187), Expect = 3e-15
Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 1/162 (0%)
Frame = +2
Query: 335 LASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 514
L + G D ++ +W + G+ ++ + GH+ I + F + GA T+ +WD+
Sbjct: 32 LVTGGEDHKVNLWAI-GKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEE 90
Query: 515 GTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVL 694
++ L GH + SV G E S S D +K+WD RK+ + ++ +VL
Sbjct: 91 AKIVRTLTGHRSNCISVDFHPFG-EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVL 149
Query: 695 -FNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGL 817
F ++S G DN++K+WD+ ++ + K H + L
Sbjct: 150 RFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSL 191
Score = 63.3 bits (147), Expect = 2e-10
Identities = 47/148 (31%), Positives = 70/148 (47%), Gaps = 3/148 (2%)
Frame = +2
Query: 416 HTGAIMQLCFSPDGSH-LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 592
H+ A+ L S L TG D+ V +W + I L GH++ ++SV+ E+
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFD--ASEV 72
Query: 593 LVSA-SDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIKMWDIRN 766
LV+A + TIKLWD + V + SV F+ E S +D +K+WDIR
Sbjct: 73 LVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK 132
Query: 767 NQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
KGHT V L + DG +++S
Sbjct: 133 KGCIHTYKGHTRGVNVLRFTPDGRWVVS 160
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 81.0 bits (191), Expect = 1e-15
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 2/164 (1%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQ-CENVMVMKGHTGAIMQLCF 445
+ L GH+ + FHP G+ AS D + IW++ + C + KGHT + L F
Sbjct: 94 VRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGC--IHTYKGHTRGVNVLRF 151
Query: 446 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 625
+PDG + +G DN V VWD+ G + + K H + S+ LL + S D T+K
Sbjct: 152 TPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLD-FHPHEFLLATGSADRTVK 210
Query: 626 LWDARKRNPVAS-FDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 754
WD + S + V + FN + +L G+ +K++
Sbjct: 211 FWDLETFELIGSGGPETAGVRCLSFNPDGKTVL-CGLQESLKIF 253
Score = 79.4 bits (187), Expect = 3e-15
Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 1/162 (0%)
Frame = +2
Query: 335 LASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 514
L + G D ++ +W + G+ ++ + GH+ I + F + GA T+ +WD+
Sbjct: 32 LVTGGEDHKVNLWAI-GKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEE 90
Query: 515 GTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVL 694
++ L GH + SV G E S S D +K+WD RK+ + ++ +VL
Sbjct: 91 AKIVRTLTGHRSNCISVDFHPFG-EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVL 149
Query: 695 -FNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGL 817
F ++S G DN++K+WD+ ++ + K H + L
Sbjct: 150 RFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSL 191
Score = 63.3 bits (147), Expect = 2e-10
Identities = 47/148 (31%), Positives = 70/148 (47%), Gaps = 3/148 (2%)
Frame = +2
Query: 416 HTGAIMQLCFSPDGSH-LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 592
H+ A+ L S L TG D+ V +W + I L GH++ ++SV+ E+
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFD--ASEV 72
Query: 593 LVSA-SDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIKMWDIRN 766
LV+A + TIKLWD + V + SV F+ E S +D +K+WDIR
Sbjct: 73 LVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK 132
Query: 767 NQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
KGHT V L + DG +++S
Sbjct: 133 KGCIHTYKGHTRGVNVLRFTPDGRWVVS 160
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 81.0 bits (191), Expect = 1e-15
Identities = 49/191 (25%), Positives = 84/191 (43%), Gaps = 4/191 (2%)
Frame = +2
Query: 284 GHQGEIFTAKFHPEGKHLA-SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGS 460
GH + +F P+ HL SAG D ++ IW+VY + + GH A+ +CFS DGS
Sbjct: 280 GHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGS 339
Query: 461 HLYTGATDNTVAVWDVPTGTRIKKLK-GHANFVNSVSGARRGPELLVSASDDNTIKLWDA 637
T D + WD TG I G +V ++ +L++ D I WD
Sbjct: 340 KFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDI 399
Query: 638 RKRNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKI-KGHTDTVT 811
+D V ++ F D + ++S D +++W+ + I + H ++
Sbjct: 400 NTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMP 459
Query: 812 GLSLSWDGAYL 844
+S+ +G +L
Sbjct: 460 SISVHPNGNWL 470
Score = 44.4 bits (100), Expect = 1e-04
Identities = 33/122 (27%), Positives = 46/122 (37%), Gaps = 4/122 (3%)
Frame = +2
Query: 281 EGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYG--QCENVMVMKGH--TGAIMQLCFS 448
E H + + HP G LA+ D QILI++ Q GH G Q+ FS
Sbjct: 452 EPHMHSMPSISVHPNGNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFS 511
Query: 449 PDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKL 628
PDG + +G + WD + + LK H + + D IK
Sbjct: 512 PDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHNGVCIGAEWHPLEQSKVATCGWDGLIKY 571
Query: 629 WD 634
WD
Sbjct: 572 WD 573
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 79.0 bits (186), Expect = 4e-15
Identities = 52/201 (25%), Positives = 94/201 (46%), Gaps = 10/201 (4%)
Frame = +2
Query: 284 GHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCE-NVMVMKGHTGAIMQLCFSPDG- 457
GH ++ + F + + + SA DR I +WN G+C+ + GH + + FSP+
Sbjct: 103 GHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTL 162
Query: 458 -SHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD 634
+ + + D TV VW++ L GH+ ++N+V+ + G L S D I LWD
Sbjct: 163 VPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDG-SLCASGGKDGVILLWD 221
Query: 635 ARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNN------QIXLKIKGH 796
+ + S ++ + S+ F+ L + +N I++WD+ + ++ LK +
Sbjct: 222 LAEGKKLYSLEAGSIIHSLCFSPN-RYWLCAATENSIRIWDLESKSVVEDLKVDLKAEAE 280
Query: 797 -TDTVTGLSLSWDGAYLLSIN 856
TD TG+ Y S+N
Sbjct: 281 KTDGSTGIGNKTKVIYCTSLN 301
Score = 76.2 bits (179), Expect = 3e-14
Identities = 48/181 (26%), Positives = 93/181 (51%), Gaps = 9/181 (4%)
Frame = +2
Query: 335 LASAGFDRQILIWNVYGQCENVMV----MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 502
+ ++ D+ I++W + + ++ V M GH+ + + S DG +G+ D + +W
Sbjct: 31 IVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLW 90
Query: 503 DVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD--ARKRNPVASFDSSY 676
D+ TG ++ GH V SV+ + + +VSAS D TIKLW+ + ++ D
Sbjct: 91 DLATGESTRRFVGHTKDVLSVAFSTDNRQ-IVSASRDRTIKLWNTLGECKYTISEADGHK 149
Query: 677 P-VTSVLF--NDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLL 847
V+ V F N I+S+ D +K+W+++N ++ + GH+ + +++S DG+
Sbjct: 150 EWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCA 209
Query: 848 S 850
S
Sbjct: 210 S 210
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/127 (24%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Frame = +2
Query: 281 EGHQGEIFTAKFHPEG--KHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPD 454
+GH+ + +F P + SA +D+ + +WN+ C+ + GH+G + + SPD
Sbjct: 146 DGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQN-CKLRNTLAGHSGYLNTVAVSPD 204
Query: 455 GSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD 634
GS +G D + +WD+ G ++ L+ + ++S+ + + A+ +N+I++WD
Sbjct: 205 GSLCASGGKDGVILLWDLAEGKKLYSLEA-GSIIHSLCFSPN--RYWLCAATENSIRIWD 261
Query: 635 ARKRNPV 655
++ V
Sbjct: 262 LESKSVV 268
Score = 52.0 bits (119), Expect = 5e-07
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIM-QLCFSPD 454
L GH G + T P+G AS G D IL+W++ E + G+I+ LCFSP+
Sbjct: 189 LAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDL---AEGKKLYSLEAGSIIHSLCFSPN 245
Query: 455 GSHLYTGATDNTVAVWDVPTGTRIKKLK 538
+ AT+N++ +WD+ + + ++ LK
Sbjct: 246 -RYWLCAATENSIRIWDLESKSVVEDLK 272
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 78.6 bits (185), Expect = 5e-15
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 2/159 (1%)
Frame = +2
Query: 284 GHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQ-CENVMVMKGHTGAIMQLCFSPDGS 460
GH+ +FHP G+ LAS D + +W+ + C + KGHT I + FSPDG
Sbjct: 47 GHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGC--IQTYKGHTRGISTIEFSPDGR 104
Query: 461 HLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDAR 640
+ +G DN V VWD+ G + + K H + S+ LL + S D T+K WD
Sbjct: 105 WVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLD-FHPLEFLLATGSADRTVKFWDLE 163
Query: 641 KRNPVASF-DSSYPVTSVLFNDTAEKILSSGVDNVIKMW 754
+ + + V ++ F+ + L G+D+ +K++
Sbjct: 164 TFELIGTTRPEATGVRAIAFHPDGQ-TLFCGLDDGLKVY 201
Score = 74.5 bits (175), Expect = 9e-14
Identities = 34/140 (24%), Positives = 72/140 (51%), Gaps = 1/140 (0%)
Frame = +2
Query: 401 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARR 580
M + GHT + + F+ + + GA+ + +WD+ ++ GH + ++V
Sbjct: 1 MSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPF 60
Query: 581 GPELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWD 757
G E L S S D +++WD RK+ + ++ + ++++ F+ ++S G+DNV+K+WD
Sbjct: 61 G-EFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWD 119
Query: 758 IRNNQIXLKIKGHTDTVTGL 817
+ ++ + K H + L
Sbjct: 120 LTAGKLLHEFKCHEGPIRSL 139
Score = 66.1 bits (154), Expect = 3e-11
Identities = 44/192 (22%), Positives = 81/192 (42%), Gaps = 1/192 (0%)
Frame = +2
Query: 272 MLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSP 451
M L GH + + F+ E + + I +W++ + + V GH + F P
Sbjct: 1 MSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLE-ESKMVRAFTGHRSNCSAVEFHP 59
Query: 452 DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLW 631
G L +G++D + VWD I+ KGH ++++ + G +VS DN +K+W
Sbjct: 60 FGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDG-RWVVSGGLDNVVKVW 118
Query: 632 DARKRNPVASFD-SSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTV 808
D + F P+ S+ F+ + + D +K WD+ ++ + V
Sbjct: 119 DLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGV 178
Query: 809 TGLSLSWDGAYL 844
++ DG L
Sbjct: 179 RAIAFHPDGQTL 190
Score = 57.6 bits (133), Expect = 1e-08
Identities = 35/122 (28%), Positives = 54/122 (44%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFS 448
I +GH I T +F P+G+ + S G D + +W++ + + K H G I L F
Sbjct: 84 IQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAG-KLLHEFKCHEGPIRSLDFH 142
Query: 449 PDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKL 628
P L TG+ D TV WD+ T I + A V +++ G L D +
Sbjct: 143 PLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCGLDDGLKVYS 202
Query: 629 WD 634
W+
Sbjct: 203 WE 204
Score = 50.0 bits (114), Expect = 2e-06
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Frame = +2
Query: 533 LKGHANFVNSVSGARRGPELLVSA-SDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDT 706
L GH + V+SV A E+LV A + IKLWD + V +F ++V F+
Sbjct: 3 LCGHTSPVDSV--AFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPF 60
Query: 707 AEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
E + S D +++WD R KGHT ++ + S DG +++S
Sbjct: 61 GEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVS 108
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 77.4 bits (182), Expect = 1e-14
Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 3/172 (1%)
Frame = +2
Query: 284 GHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCE-NVMVMKGHTGAIMQLCFSPDG- 457
GH ++ + F + + + SA DR I +WN G+C+ + GH + + FSP+
Sbjct: 103 GHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTL 162
Query: 458 -SHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD 634
+ + + D TV VW++ L GH+ ++N+V+ + G L S D I LWD
Sbjct: 163 VPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDG-SLCASGGKDGVILLWD 221
Query: 635 ARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIK 790
+ + S ++ + S+ F+ L + +N I++WD+ + + +K
Sbjct: 222 LAEGKKLYSLEAGSIIHSLCFSPN-RYWLCAATENSIRIWDLESKSVVEDLK 272
Score = 74.1 bits (174), Expect = 1e-13
Identities = 48/181 (26%), Positives = 92/181 (50%), Gaps = 9/181 (4%)
Frame = +2
Query: 335 LASAGFDRQILIWNVYGQCENVMV----MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 502
+ +A D+ I++W + ++ V + GH+ + + S DG +G+ D + +W
Sbjct: 31 IVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLW 90
Query: 503 DVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD--ARKRNPVASFDSSY 676
D+ TG ++ GH V SV+ + + +VSAS D TIKLW+ + ++ D
Sbjct: 91 DLATGETTRRFVGHTKDVLSVAFSTDNRQ-IVSASRDRTIKLWNTLGECKYTISEGDGHK 149
Query: 677 P-VTSVLF--NDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLL 847
V+ V F N I+S+ D +K+W+++N ++ + GH+ + +++S DG+
Sbjct: 150 EWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCA 209
Query: 848 S 850
S
Sbjct: 210 S 210
Score = 59.7 bits (138), Expect = 3e-09
Identities = 31/127 (24%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Frame = +2
Query: 281 EGHQGEIFTAKFHPEG--KHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPD 454
+GH+ + +F P + SA +D+ + +WN+ C+ + GH+G + + SPD
Sbjct: 146 DGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQN-CKLRNSLVGHSGYLNTVAVSPD 204
Query: 455 GSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD 634
GS +G D + +WD+ G ++ L+ + ++S+ + + A+ +N+I++WD
Sbjct: 205 GSLCASGGKDGVILLWDLAEGKKLYSLEA-GSIIHSLCFSPN--RYWLCAATENSIRIWD 261
Query: 635 ARKRNPV 655
++ V
Sbjct: 262 LESKSVV 268
Score = 51.6 bits (118), Expect = 7e-07
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIM-QLCFSPD 454
L GH G + T P+G AS G D IL+W++ E + G+I+ LCFSP+
Sbjct: 189 LVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDL---AEGKKLYSLEAGSIIHSLCFSPN 245
Query: 455 GSHLYTGATDNTVAVWDVPTGTRIKKLK 538
+ AT+N++ +WD+ + + ++ LK
Sbjct: 246 -RYWLCAATENSIRIWDLESKSVVEDLK 272
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 437 LCFSPDGSHLYTGATDNTVAVWDV 508
L +S DGS L++G TD V VW +
Sbjct: 300 LNWSADGSTLFSGYTDGVVRVWGI 323
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 77.4 bits (182), Expect = 1e-14
Identities = 45/203 (22%), Positives = 95/203 (46%), Gaps = 5/203 (2%)
Frame = +2
Query: 263 APIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGH---TGAIM 433
A + + GH + F P+GK + + D +++WN CE++ ++KGH T +
Sbjct: 188 AYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPK-TCESIHIVKGHPYHTEGLT 246
Query: 434 QLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASD- 610
L + + S +G+ D +V + ++ TG + L H + V V + + ++A+
Sbjct: 247 CLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGG 306
Query: 611 -DNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKI 787
D + +WD + P + VTS+ + T++ + + + + +WD
Sbjct: 307 MDKKLIIWDLQHSTPRFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTY 366
Query: 788 KGHTDTVTGLSLSWDGAYLLSIN 856
GH D V +S+S + +++S++
Sbjct: 367 HGHQDAVQAISVSTNTDFIVSVS 389
Score = 65.3 bits (152), Expect = 5e-11
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 3/195 (1%)
Frame = +2
Query: 284 GHQGEIFTAKFHPEGKHL-ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGS 460
GH+GE++ P L A+ G D + +W + G + + GH ++ L FS DG
Sbjct: 68 GHKGELYALACSPTDATLVATGGGDDKAFLWKI-GNGDWAAELPGHKDSVSCLAFSYDGQ 126
Query: 461 HLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDAR 640
L +G D V ++D +GT L G + V RG ++++ S+D ++ +W+A
Sbjct: 127 LLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRG-HIVLAGSEDCSLWMWNAD 185
Query: 641 KRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGL 817
K + F + VT F + I + D + +W+ + + +KGH GL
Sbjct: 186 KEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGL 245
Query: 818 S-LSWDGAYLLSING 859
+ L + L+I+G
Sbjct: 246 TCLDINSNSSLAISG 260
Score = 58.8 bits (136), Expect = 5e-09
Identities = 48/193 (24%), Positives = 90/193 (46%), Gaps = 6/193 (3%)
Frame = +2
Query: 275 LLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPD 454
+L+G I ++HP G + + D + +WN + + + GH + F+PD
Sbjct: 150 VLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNADKEA-YLNMFSGHNLNVTCGDFTPD 208
Query: 455 GSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS--GARRGPELLVSASDDNTIKL 628
G + TG+ D ++ VW+ T I +KGH ++ L +S S D ++ +
Sbjct: 209 GKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHI 268
Query: 629 WDARKRNPVASFDS-SYPVTSVLFNDTAEKI---LSSGVDNVIKMWDIRNNQIXLKIKGH 796
+ V+S +S + V V F+ ++ I + G+D + +WD++++ I H
Sbjct: 269 VNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRF-ICEH 327
Query: 797 TDTVTGLSLSWDG 835
+ VT SL+W G
Sbjct: 328 EEGVT--SLTWIG 338
Score = 46.0 bits (104), Expect = 3e-05
Identities = 38/188 (20%), Positives = 78/188 (41%), Gaps = 5/188 (2%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDG 457
L GH+ + F +G+ LAS G D + I++ V+ G I + + P G
Sbjct: 109 LPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLK-CVLDGPGAGIEWVRWHPRG 167
Query: 458 SHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDA 637
+ G+ D ++ +W+ + GH N + +L+ + SDD ++ +W+
Sbjct: 168 HIVLAGSEDCSLWMWNADKEAYLNMFSGH-NLNVTCGDFTPDGKLICTGSDDASLIVWNP 226
Query: 638 RKRNPVASFDSSYP-----VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTD 802
+ + +P +T + N + +S D + + +I ++ + HTD
Sbjct: 227 KTCESI-HIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTD 285
Query: 803 TVTGLSLS 826
+V + S
Sbjct: 286 SVECVKFS 293
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +2
Query: 287 HQGEIFTAKFHPEGKHLASAGFDRQILIWN-VYGQCENVMVMKGHTGAIMQLCFSPDGSH 463
H+ + + + K+LA+ + + IW+ + G C V GH A+ + S +
Sbjct: 327 HEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNC--VHTYHGHQDAVQAISVSTNTDF 384
Query: 464 LYTGATDNTVAVWD 505
+ + + DNT V++
Sbjct: 385 IVSVSVDNTARVFE 398
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 75.8 bits (178), Expect = 4e-14
Identities = 42/170 (24%), Positives = 83/170 (48%), Gaps = 3/170 (1%)
Frame = +2
Query: 254 NLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIM 433
N + + E H I HP ++ S+ D I +W+ + +GH+ +M
Sbjct: 87 NTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVM 146
Query: 434 QLCFSPDGSHLYTGAT-DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE-LLVSAS 607
Q+ F+P ++ + A+ D T+ +W++ + L H VN V G + L++ S
Sbjct: 147 QVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGS 206
Query: 608 DDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMW 754
DD+T K+WD + ++ V + D ++ V++V F+ I++ D +++W
Sbjct: 207 DDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 67.7 bits (158), Expect = 1e-11
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 3/131 (2%)
Frame = +2
Query: 254 NLYAPIMLLEGHQGEIFTAKFHPEGKH-LASAGFDRQILIWNVYGQCENVMVMKGHTGAI 430
N +A + EGH + F+P+ + ASA DR I IWN+ G + + H +
Sbjct: 130 NGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNL-GSPDPNFTLDAHQKGV 188
Query: 431 MQLCFSPDGS--HLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSA 604
+ + G +L TG+ D+T VWD T + ++ L GH + V++V P ++++
Sbjct: 189 NCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELP-IIITG 247
Query: 605 SDDNTIKLWDA 637
S+D T+++W A
Sbjct: 248 SEDGTVRIWHA 258
Score = 65.7 bits (153), Expect = 4e-11
Identities = 42/175 (24%), Positives = 81/175 (46%), Gaps = 4/175 (2%)
Frame = +2
Query: 305 TAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATD 484
+AKF P + + + D I ++N Y + V V + H+ I + P ++ + + D
Sbjct: 62 SAKFIPRKQWVVAGADDMYIRVYN-YNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDD 120
Query: 485 NTVAVWDVPTGTRIKKL-KGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS 661
+ +WD G ++ +GH+++V V + SAS D TIK+W+ +P +
Sbjct: 121 MLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
Query: 662 FDSSYP-VTSVLFNDTAEK--ILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGL 817
D+ V V + +K +++ D+ K+WD + + GHT V+ +
Sbjct: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAV 235
Score = 47.6 bits (108), Expect = 1e-05
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 2/138 (1%)
Frame = +2
Query: 266 PIMLLEGHQGEIFTAKFHPEGK--HLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQL 439
P L+ HQ + + G +L + D +W+ Y V + GHT + +
Sbjct: 177 PNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD-YQTKSCVQTLDGHTHNVSAV 235
Query: 440 CFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNT 619
CF P+ + TG+ D TV +W T L V ++ G + +V D+ T
Sbjct: 236 CFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAI-GYIKSSRRVVIGYDEGT 294
Query: 620 IKLWDARKRNPVASFDSS 673
I + R+ PVAS DSS
Sbjct: 295 IMVKLGRE-IPVASMDSS 311
Score = 40.7 bits (91), Expect = 0.001
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
Frame = +2
Query: 464 LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK 643
LY+G TV +W+ T T K + V S R + +V+ +DD I++++
Sbjct: 34 LYSG----TVCIWNYQTQTITKSFEVTELPVRSAKFIPR-KQWVVAGADDMYIRVYNYNT 88
Query: 644 RNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKI-KGHTDTV 808
+ V F++ S + V + T +LSS D +IK+WD N +I +GH+ V
Sbjct: 89 MDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYV 145
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 75.8 bits (178), Expect = 4e-14
Identities = 42/170 (24%), Positives = 83/170 (48%), Gaps = 3/170 (1%)
Frame = +2
Query: 254 NLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIM 433
N + + E H I HP ++ S+ D I +W+ + +GH+ +M
Sbjct: 87 NTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVM 146
Query: 434 QLCFSPDGSHLYTGAT-DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE-LLVSAS 607
Q+ F+P ++ + A+ D T+ +W++ + L H VN V G + L++ S
Sbjct: 147 QVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGS 206
Query: 608 DDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMW 754
DD+T K+WD + ++ V + D ++ V++V F+ I++ D +++W
Sbjct: 207 DDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 67.7 bits (158), Expect = 1e-11
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 3/131 (2%)
Frame = +2
Query: 254 NLYAPIMLLEGHQGEIFTAKFHPEGKH-LASAGFDRQILIWNVYGQCENVMVMKGHTGAI 430
N +A + EGH + F+P+ + ASA DR I IWN+ G + + H +
Sbjct: 130 NGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNL-GSPDPNFTLDAHQKGV 188
Query: 431 MQLCFSPDGS--HLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSA 604
+ + G +L TG+ D+T VWD T + ++ L GH + V++V P ++++
Sbjct: 189 NCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELP-IIITG 247
Query: 605 SDDNTIKLWDA 637
S+D T+++W A
Sbjct: 248 SEDGTVRIWHA 258
Score = 65.7 bits (153), Expect = 4e-11
Identities = 42/175 (24%), Positives = 81/175 (46%), Gaps = 4/175 (2%)
Frame = +2
Query: 305 TAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATD 484
+AKF P + + + D I ++N Y + V V + H+ I + P ++ + + D
Sbjct: 62 SAKFIPRKQWVVAGADDMYIRVYN-YNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDD 120
Query: 485 NTVAVWDVPTGTRIKKL-KGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS 661
+ +WD G ++ +GH+++V V + SAS D TIK+W+ +P +
Sbjct: 121 MLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
Query: 662 FDSSYP-VTSVLFNDTAEK--ILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGL 817
D+ V V + +K +++ D+ K+WD + + GHT V+ +
Sbjct: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAV 235
Score = 47.6 bits (108), Expect = 1e-05
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 2/138 (1%)
Frame = +2
Query: 266 PIMLLEGHQGEIFTAKFHPEGK--HLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQL 439
P L+ HQ + + G +L + D +W+ Y V + GHT + +
Sbjct: 177 PNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD-YQTKSCVQTLDGHTHNVSAV 235
Query: 440 CFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNT 619
CF P+ + TG+ D TV +W T L V ++ G + +V D+ T
Sbjct: 236 CFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAI-GYIKSSRRVVIGYDEGT 294
Query: 620 IKLWDARKRNPVASFDSS 673
I + R+ PVAS DSS
Sbjct: 295 IMVKLGRE-IPVASMDSS 311
Score = 40.7 bits (91), Expect = 0.001
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
Frame = +2
Query: 464 LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK 643
LY+G TV +W+ T T K + V S R + +V+ +DD I++++
Sbjct: 34 LYSG----TVCIWNYQTQTITKSFEVTELPVRSAKFIPR-KQWVVAGADDMYIRVYNYNT 88
Query: 644 RNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKI-KGHTDTV 808
+ V F++ S + V + T +LSS D +IK+WD N +I +GH+ V
Sbjct: 89 MDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYV 145
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 75.8 bits (178), Expect = 4e-14
Identities = 42/170 (24%), Positives = 83/170 (48%), Gaps = 3/170 (1%)
Frame = +2
Query: 254 NLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIM 433
N + + E H I HP ++ S+ D I +W+ + +GH+ +M
Sbjct: 87 NTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVM 146
Query: 434 QLCFSPDGSHLYTGAT-DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE-LLVSAS 607
Q+ F+P ++ + A+ D T+ +W++ + L H VN V G + L++ S
Sbjct: 147 QVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGS 206
Query: 608 DDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMW 754
DD+T K+WD + ++ V + D ++ V++V F+ I++ D +++W
Sbjct: 207 DDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 67.7 bits (158), Expect = 1e-11
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 3/131 (2%)
Frame = +2
Query: 254 NLYAPIMLLEGHQGEIFTAKFHPEGKH-LASAGFDRQILIWNVYGQCENVMVMKGHTGAI 430
N +A + EGH + F+P+ + ASA DR I IWN+ G + + H +
Sbjct: 130 NGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNL-GSPDPNFTLDAHQKGV 188
Query: 431 MQLCFSPDGS--HLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSA 604
+ + G +L TG+ D+T VWD T + ++ L GH + V++V P ++++
Sbjct: 189 NCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELP-IIITG 247
Query: 605 SDDNTIKLWDA 637
S+D T+++W A
Sbjct: 248 SEDGTVRIWHA 258
Score = 65.7 bits (153), Expect = 4e-11
Identities = 42/175 (24%), Positives = 81/175 (46%), Gaps = 4/175 (2%)
Frame = +2
Query: 305 TAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATD 484
+AKF P + + + D I ++N Y + V V + H+ I + P ++ + + D
Sbjct: 62 SAKFIPRKQWVVAGADDMYIRVYN-YNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDD 120
Query: 485 NTVAVWDVPTGTRIKKL-KGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS 661
+ +WD G ++ +GH+++V V + SAS D TIK+W+ +P +
Sbjct: 121 MLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
Query: 662 FDSSYP-VTSVLFNDTAEK--ILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGL 817
D+ V V + +K +++ D+ K+WD + + GHT V+ +
Sbjct: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAV 235
Score = 47.6 bits (108), Expect = 1e-05
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 2/138 (1%)
Frame = +2
Query: 266 PIMLLEGHQGEIFTAKFHPEGK--HLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQL 439
P L+ HQ + + G +L + D +W+ Y V + GHT + +
Sbjct: 177 PNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD-YQTKSCVQTLDGHTHNVSAV 235
Query: 440 CFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNT 619
CF P+ + TG+ D TV +W T L V ++ G + +V D+ T
Sbjct: 236 CFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAI-GYIKSSRRVVIGYDEGT 294
Query: 620 IKLWDARKRNPVASFDSS 673
I + R+ PVAS DSS
Sbjct: 295 IMVKLGRE-IPVASMDSS 311
Score = 40.7 bits (91), Expect = 0.001
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
Frame = +2
Query: 464 LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK 643
LY+G TV +W+ T T K + V S R + +V+ +DD I++++
Sbjct: 34 LYSG----TVCIWNYQTQTITKSFEVTELPVRSAKFIPR-KQWVVAGADDMYIRVYNYNT 88
Query: 644 RNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKI-KGHTDTV 808
+ V F++ S + V + T +LSS D +IK+WD N +I +GH+ V
Sbjct: 89 MDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYV 145
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 74.9 bits (176), Expect = 7e-14
Identities = 51/175 (29%), Positives = 79/175 (45%), Gaps = 9/175 (5%)
Frame = +2
Query: 266 PIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCF 445
P GHQGE+ K+ P G LAS D IWN+ Q V ++ HT I + +
Sbjct: 440 PAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNI-KQSTFVHDLREHTKEIYTIRW 498
Query: 446 SPDGS---------HLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLV 598
SP G L + + D+TV +WD G + GH V S++ + G E +
Sbjct: 499 SPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNG-EYIA 557
Query: 599 SASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIR 763
S S D +I +W ++ V ++ + + V +N KI + DN + + D R
Sbjct: 558 SGSLDKSIHIWSIKEGKIVKTYTGNGGIFEVCWNKEGNKIAACFADNSVCVLDFR 612
Score = 74.5 bits (175), Expect = 9e-14
Identities = 51/204 (25%), Positives = 96/204 (47%), Gaps = 10/204 (4%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFS 448
I L H+G IF+ K++ +G +L + DR ++W+V + E + H+G + + +
Sbjct: 358 ISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAE-EWKQQFEFHSGPTLDVDWR 416
Query: 449 PDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKL 628
+ S T +TD+ + + + K GH VN V G LL S SDD+T K+
Sbjct: 417 NNVS-FATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTG-SLLASCSDDSTAKI 474
Query: 629 WDARKRNPVASF-DSSYPVTSVLFNDTAE---------KILSSGVDNVIKMWDIRNNQIX 778
W+ ++ V + + + ++ ++ T + S+ D+ +K+WD ++
Sbjct: 475 WNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKML 534
Query: 779 LKIKGHTDTVTGLSLSWDGAYLLS 850
GH + V L+ S +G Y+ S
Sbjct: 535 CSFNGHREPVYSLAFSPNGEYIAS 558
Score = 72.5 bits (170), Expect = 3e-13
Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 9/162 (5%)
Frame = +2
Query: 338 ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG 517
A++ D I + + G+ GH G + + + P GS L + + D+T +W++
Sbjct: 422 ATSSTDSMIYLCKI-GETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQS 480
Query: 518 TRIKKLKGHANFVNSVSGARRGPE--------LLVSASDDNTIKLWDARKRNPVASFDS- 670
T + L+ H + ++ + GP L SAS D+T+KLWDA + SF+
Sbjct: 481 TFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGH 540
Query: 671 SYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGH 796
PV S+ F+ E I S +D I +W I+ +I G+
Sbjct: 541 REPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGN 582
Score = 65.7 bits (153), Expect = 4e-11
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 1/172 (0%)
Frame = +2
Query: 296 EIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTG 475
++ T ++ EG LA+ D Q IW + G E + + H G I L ++ G +L TG
Sbjct: 326 DVTTLDWNGEGTLLATGSCDGQARIWTLNG--ELISTLSKHKGPIFSLKWNKKGDYLLTG 383
Query: 476 ATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPV 655
+ D T VWDV ++ + H+ V R ++S D+ I L + P
Sbjct: 384 SVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDW--RNNVSFATSSTDSMIYLCKIGETRPA 441
Query: 656 ASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTV 808
+F V V ++ T + S D+ K+W+I+ + ++ HT +
Sbjct: 442 KTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEI 493
Score = 54.8 bits (126), Expect = 7e-08
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 18/227 (7%)
Frame = +2
Query: 206 GTREKAVVTSSVPRTSNL-YAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNV- 379
G +V + +TS++ + + +LEGH E+ + P LAS D IW++
Sbjct: 236 GAEPMDIVMTPTSQTSHIPNSDVRILEGHTSEVCACAWSPSASLLASGSGDATARIWSIP 295
Query: 380 --------YGQCENVMVMKGHTGA-------IMQLCFSPDGSHLYTGATDNTVAVWDVPT 514
G+ N +++K G + L ++ +G+ L TG+ D +W +
Sbjct: 296 EGSFKAVHTGRNINALILKHAKGKSNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTL-N 354
Query: 515 GTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFD-SSYPVTSV 691
G I L H + S+ ++G + L++ S D T +WD + F+ S P V
Sbjct: 355 GELISTLSKHKGPIFSLKWNKKG-DYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDV 413
Query: 692 LFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWD 832
+ + +S D++I + I + GH V + WD
Sbjct: 414 DWRNNV-SFATSSTDSMIYLCKIGETRPAKTFTGHQGEVN--CVKWD 457
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 73.7 bits (173), Expect = 2e-13
Identities = 43/173 (24%), Positives = 84/173 (48%), Gaps = 4/173 (2%)
Frame = +2
Query: 284 GHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVM--KGHTGAIMQLCFSPDG 457
GH ++ + F + + + SA DR I +WN G+C+ + +GH + + FSP+
Sbjct: 103 GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNT 162
Query: 458 SH--LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLW 631
+ + + D TV VW++ L GH +V++V+ + G L S D + LW
Sbjct: 163 LQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDG-SLCASGGKDGVVLLW 221
Query: 632 DARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIK 790
D + + S +++ + ++ F+ L + ++ IK+WD+ + I +K
Sbjct: 222 DLAEGKKLYSLEANSVIHALCFSPN-RYWLCAATEHGIKIWDLESKSIVEDLK 273
Score = 73.3 bits (172), Expect = 2e-13
Identities = 50/184 (27%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Frame = +2
Query: 335 LASAGFDRQILIWNV------YGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVA 496
+ SA D+ I++W + YG + + GH+ + + S DG +G+ D +
Sbjct: 31 IVSASRDKSIILWKLTKDDKAYGVAQRRLT--GHSHFVEDVVLSSDGQFALSGSWDGELR 88
Query: 497 VWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD--ARKRNPVASFDS 670
+WD+ G ++ GH V SV+ + + +VSAS D TIKLW+ + ++
Sbjct: 89 LWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQ-IVSASRDRTIKLWNTLGECKYTISEGGE 147
Query: 671 SYP--VTSVLF--NDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGA 838
+ V+ V F N I+S+ D +K+W++ N ++ + GHT V+ +++S DG+
Sbjct: 148 GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGS 207
Query: 839 YLLS 850
S
Sbjct: 208 LCAS 211
Score = 62.9 bits (146), Expect = 3e-10
Identities = 33/127 (25%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Frame = +2
Query: 281 EGHQGEIFTAKFHPEGKH--LASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPD 454
EGH+ + +F P + SA +D+ + +WN+ C+ + GHTG + + SPD
Sbjct: 147 EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNL-SNCKLRSTLAGHTGYVSTVAVSPD 205
Query: 455 GSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD 634
GS +G D V +WD+ G ++ L+ + + ++++ + + A+ ++ IK+WD
Sbjct: 206 GSLCASGGKDGVVLLWDLAEGKKLYSLEAN-SVIHALCFSPN--RYWLCAATEHGIKIWD 262
Query: 635 ARKRNPV 655
++ V
Sbjct: 263 LESKSIV 269
Score = 48.0 bits (109), Expect = 9e-06
Identities = 25/87 (28%), Positives = 49/87 (56%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDG 457
L GH G + T P+G AS G D +L+W++ + + + ++ ++ I LCFSP+
Sbjct: 190 LAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDL-AEGKKLYSLEANS-VIHALCFSPN- 246
Query: 458 SHLYTGATDNTVAVWDVPTGTRIKKLK 538
+ AT++ + +WD+ + + ++ LK
Sbjct: 247 RYWLCAATEHGIKIWDLESKSIVEDLK 273
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Frame = +2
Query: 533 LKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNP---VAS---FDSSYPVTSVL 694
++ H + V +++ +++VSAS D +I LW K + VA S+ V V+
Sbjct: 11 MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVV 70
Query: 695 FNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
+ + LS D +++WD+ + GHT V ++ S D ++S
Sbjct: 71 LSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVS 122
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 437 LCFSPDGSHLYTGATDNTVAVWDV 508
L +S DGS L++G TD + VW +
Sbjct: 301 LNWSADGSTLFSGYTDGVIRVWGI 324
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 73.3 bits (172), Expect = 2e-13
Identities = 42/128 (32%), Positives = 66/128 (51%), Gaps = 3/128 (2%)
Frame = +2
Query: 452 DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLW 631
D HL +G D V WDV T I L GH ++V + +LV+ S D+T+K+W
Sbjct: 147 DKLHLVSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVW 206
Query: 632 DAR--KRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWD-IRNNQIXLKIKGHTD 802
DAR N +A + PV V++ + I ++G N +K+WD I ++ ++ H
Sbjct: 207 DARVHTSNWIAEINHGLPVEDVVYLPSGGLIATAG-GNSVKVWDLIGGGKMVCSMESHNK 265
Query: 803 TVTGLSLS 826
TVT L ++
Sbjct: 266 TVTSLRVA 273
Score = 48.0 bits (109), Expect = 9e-06
Identities = 56/196 (28%), Positives = 91/196 (46%), Gaps = 9/196 (4%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGK-HLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSP- 451
L H K+ + K HL S G D + W+V G + + GH + SP
Sbjct: 131 LRSHSAPARFVKYPVQDKLHLVSGGDDGVVKYWDVAGATV-ISDLLGHKDYVRCGDCSPV 189
Query: 452 DGSHLYTGATDNTVAVWD--VPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 625
+ S L TG+ D+TV VWD V T I ++ H V V G L++ + N++K
Sbjct: 190 NDSMLVTGSYDHTVKVWDARVHTSNWIAEI-NHGLPVEDVVYLPSGG--LIATAGGNSVK 246
Query: 626 LWD-ARKRNPVASFDS-SYPVTS--VLFNDTAE-KILSSGVDNVIKMWDIRNNQIXLKIK 790
+WD V S +S + VTS V ++AE +++S +D +K++D ++ ++
Sbjct: 247 VWDLIGGGKMVCSMESHNKTVTSLRVARMESAESRLVSVALDGYMKVFDYGRAKVTYSMR 306
Query: 791 GHTDTVTGLSLSWDGA 838
+ L LS DG+
Sbjct: 307 -FPAPLMSLGLSPDGS 321
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/114 (21%), Positives = 43/114 (37%), Gaps = 2/114 (1%)
Frame = +2
Query: 428 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 607
+ +CF DG+ V V+D+ ++ L+ H+ V + LVS
Sbjct: 96 VSSVCFRSDGALFAACDLSGVVQVFDIKERMALRTLRSHSAPARFVKYPVQDKLHLVSGG 155
Query: 608 DDNTIKLWDARKRNPVASF--DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIR 763
DD +K WD ++ Y +++ D+ +K+WD R
Sbjct: 156 DDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWDAR 209
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 73.3 bits (172), Expect = 2e-13
Identities = 39/127 (30%), Positives = 68/127 (53%), Gaps = 3/127 (2%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNV-YGQCENVMVMKGHTGAIMQLCF 445
I L GH+ ++ A F G+++ + DR + IW++ C + +GH G I L
Sbjct: 298 IKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALC--LASCRGHEGDITDLAV 355
Query: 446 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL--LVSASDDNT 619
S + + + + + D + VW +P G I L+GH V +++ + R + L+S+SDD T
Sbjct: 356 SSNNALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGT 415
Query: 620 IKLWDAR 640
++WDAR
Sbjct: 416 CRIWDAR 422
Score = 61.3 bits (142), Expect = 9e-10
Identities = 33/131 (25%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
Frame = +2
Query: 392 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 571
+N+ ++GH A+ F G ++ TG+ D V +W + T + +GH + ++
Sbjct: 296 QNIKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAV 355
Query: 572 ARRGPELLVSASDDNTIKLWDARKRNPVASF-DSSYPVTSVLFND---TAEKILSSGVDN 739
+ L+ SAS+D I++W P++ + VT++ F+ + ++LSS D
Sbjct: 356 SSNN-ALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDG 414
Query: 740 VIKMWDIRNNQ 772
++WD R +Q
Sbjct: 415 TCRIWDARYSQ 425
Score = 49.2 bits (112), Expect = 4e-06
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Frame = +2
Query: 524 IKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY-PVTSVLFN 700
IKKL+GH N V R G +++ SDD +K+W +AS +T + +
Sbjct: 298 IKKLRGHRNAVYCAIFDRSG-RYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVS 356
Query: 701 DTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLS 826
+ S+ D VI++W + + ++GHT VT ++ S
Sbjct: 357 SNNALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFS 398
Score = 31.5 bits (68), Expect = 0.80
Identities = 16/80 (20%), Positives = 33/80 (41%)
Frame = +2
Query: 428 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 607
+ + +S D + D + VW+ G+ + L GH+ + P + +SA
Sbjct: 600 VNMIIWSLDNRFVLAAIMDCRICVWNAADGSLVHCLTGHSESSYVLDVHPFNPRIAMSAG 659
Query: 608 DDNTIKLWDARKRNPVASFD 667
D +WD + P+ ++
Sbjct: 660 YDGKTIIWDIWEGIPIKVYE 679
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/57 (21%), Positives = 28/57 (49%)
Frame = +2
Query: 680 VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
V +F+ + +++ D ++K+W + +GH +T L++S + A + S
Sbjct: 308 VYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALVAS 364
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLA-SAGFDRQILIWNVY 382
L GH + HP +A SAG+D + +IW+++
Sbjct: 635 LTGHSESSYVLDVHPFNPRIAMSAGYDGKTIIWDIW 670
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 73.3 bits (172), Expect = 2e-13
Identities = 41/170 (24%), Positives = 83/170 (48%), Gaps = 3/170 (1%)
Frame = +2
Query: 254 NLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIM 433
N + + E H I HP ++ S+ D I +W+ + +GH+ +M
Sbjct: 87 NTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVM 146
Query: 434 QLCFSPDGSHLYTGAT-DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE-LLVSAS 607
Q+ F+P ++ + A+ D T+ +W++ + L H VN V G + L++ S
Sbjct: 147 QVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGS 206
Query: 608 DDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMW 754
DD+T K+WD + ++ V + + ++ V++V F+ I++ D +++W
Sbjct: 207 DDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 68.1 bits (159), Expect = 8e-12
Identities = 38/129 (29%), Positives = 68/129 (52%), Gaps = 3/129 (2%)
Frame = +2
Query: 260 YAPIMLLEGHQGEIFTAKFHPEGKH-LASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQ 436
+A + EGH + F+P+ + ASA DR I IWN+ G + + H +
Sbjct: 132 WACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL-GSPDPNFTLDAHQKGVNC 190
Query: 437 LCFSPDGS--HLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASD 610
+ + G +L TG+ D+T VWD T + ++ L+GH + V++V P ++++ S+
Sbjct: 191 VDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELP-IIITGSE 249
Query: 611 DNTIKLWDA 637
D T+++W A
Sbjct: 250 DGTVRIWHA 258
Score = 64.1 bits (149), Expect = 1e-10
Identities = 41/175 (23%), Positives = 82/175 (46%), Gaps = 4/175 (2%)
Frame = +2
Query: 305 TAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATD 484
+AKF + + + D I ++N Y + V V + H+ I + P ++ + + D
Sbjct: 62 SAKFVARKQWVVAGADDMYIRVYN-YNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDD 120
Query: 485 NTVAVWDVPTGTRIKKL-KGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS 661
+ +WD G ++ +GH+++V V+ + SAS D TIK+W+ +P +
Sbjct: 121 MLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
Query: 662 FDSSYP-VTSVLFNDTAEK--ILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGL 817
D+ V V + +K +++ D+ K+WD + ++GHT V+ +
Sbjct: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAV 235
Score = 47.2 bits (107), Expect = 2e-05
Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 3/160 (1%)
Frame = +2
Query: 266 PIMLLEGHQGEIFTAKFHPEGK--HLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQL 439
P L+ HQ + + G +L + D +W+ Y V ++GHT + +
Sbjct: 177 PNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD-YQTKSCVQTLEGHTHNVSAV 235
Query: 440 CFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNT 619
CF P+ + TG+ D TV +W T L V ++ G + +V D+ T
Sbjct: 236 CFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAI-GYIKSSRRVVIGYDEGT 294
Query: 620 IKLWDARKRNPVASFDSSYPVTSVLFND-TAEKILSSGVD 736
I + R+ PVAS D++ + N+ I S G D
Sbjct: 295 IMVKLGRE-IPVASMDNTGKIIWAKHNEIQTANIKSIGAD 333
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 72.5 bits (170), Expect = 3e-13
Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFS 448
I L GH+ ++ A G+++ + DR + +W++ + +GH G I L S
Sbjct: 238 IKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSM-DTAYCLASCRGHEGDITDLAVS 296
Query: 449 PDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARR--GPELLVSASDDNTI 622
+ + + + D + VW +P G + L+GH V +++ + R P L+S+SDD T
Sbjct: 297 SNNIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTC 356
Query: 623 KLWDAR 640
++WDAR
Sbjct: 357 RIWDAR 362
Score = 56.4 bits (130), Expect = 2e-08
Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 4/136 (2%)
Frame = +2
Query: 392 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 571
+N+ ++GH A+ G ++ TG+ D V VW + T + +GH + ++
Sbjct: 236 QNIKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAV 295
Query: 572 ARRGPELLVSASDDNTIKLWDARKRNPVASF-DSSYPVTSVLFN---DTAEKILSSGVDN 739
+ + SAS+D I++W PV+ + VT++ F+ + ++LSS D
Sbjct: 296 SSNN-IFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDG 354
Query: 740 VIKMWDIRNNQIXLKI 787
++WD R Q +I
Sbjct: 355 TCRIWDARGAQFAPRI 370
Score = 45.2 bits (102), Expect = 6e-05
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Frame = +2
Query: 524 IKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY-PVTSVLFN 700
IK+L+GH N V R G +++ SDD +K+W +AS +T + +
Sbjct: 238 IKRLRGHRNAVYCAILDRSG-RYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVS 296
Query: 701 DTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLS 826
I S+ D VI++W + + ++GHT VT ++ S
Sbjct: 297 SNNIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFS 338
Score = 37.1 bits (82), Expect = 0.016
Identities = 25/116 (21%), Positives = 48/116 (41%), Gaps = 1/116 (0%)
Frame = +2
Query: 428 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 607
+ + +S D + D + VW+ G+ + L GH + P + +SA
Sbjct: 547 VNMIAWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTASTYVMDVHPFNPRIAMSAG 606
Query: 608 DDNTIKLWDARKRNPVASFD-SSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQ 772
D +WD + P+ +D S Y + F+ I+ S D+V +++ + Q
Sbjct: 607 YDGKTIVWDIWEGIPIQIYDISHYKLVDGKFSPDGTSIILS--DDVGQLYILSTGQ 660
Score = 31.5 bits (68), Expect = 0.80
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLA-SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPD 454
L GH + HP +A SAG+D + ++W+++ + H ++ FSPD
Sbjct: 582 LTGHTASTYVMDVHPFNPRIAMSAGYDGKTIVWDIWEGIPIQIYDISHY-KLVDGKFSPD 640
Query: 455 GSHL 466
G+ +
Sbjct: 641 GTSI 644
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 72.1 bits (169), Expect = 5e-13
Identities = 42/170 (24%), Positives = 83/170 (48%), Gaps = 3/170 (1%)
Frame = +2
Query: 254 NLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIM 433
N I + E H I HP ++ S+ D I +W+ + +GH+ +M
Sbjct: 87 NTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVM 146
Query: 434 QLCFSPDGSHLYTGAT-DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE-LLVSAS 607
Q+ F+P ++ + A+ D T+ +W++ + L H VN V G + L++ S
Sbjct: 147 QVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGS 206
Query: 608 DDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMW 754
DD+T K+WD + ++ V + + ++ V++V F+ I++ D +++W
Sbjct: 207 DDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIW 256
Score = 69.3 bits (162), Expect = 3e-12
Identities = 38/124 (30%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
Frame = +2
Query: 275 LLEGHQGEIFTAKFHPEGKH-LASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSP 451
+ EGH + F+P+ + ASA DR I IWN+ G + + H + + +
Sbjct: 137 IFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL-GSPDPNFTLDAHLKGVNCVDYFT 195
Query: 452 DGS--HLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 625
G +L TG+ D+T VWD T + ++ L+GH + V++VS P ++++ S+D T++
Sbjct: 196 GGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELP-IIITGSEDGTVR 254
Query: 626 LWDA 637
+W A
Sbjct: 255 IWHA 258
Score = 63.7 bits (148), Expect = 2e-10
Identities = 41/176 (23%), Positives = 82/176 (46%), Gaps = 4/176 (2%)
Frame = +2
Query: 305 TAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATD 484
+AKF + + + D I ++N Y + + V + H I + P ++ + + D
Sbjct: 62 SAKFIARKQWVVAGADDMFIRVYN-YNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDD 120
Query: 485 NTVAVWDVPTGTRIKKL-KGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS 661
+ +WD G ++ +GH+++V V+ + SAS D TIK+W+ +P +
Sbjct: 121 MLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
Query: 662 FDSSYP-VTSVLFNDTAEK--ILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLS 820
D+ V V + +K +++ D+ K+WD + ++GHT V+ +S
Sbjct: 181 LDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVS 236
Score = 43.6 bits (98), Expect = 2e-04
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 1/138 (0%)
Frame = +2
Query: 332 HLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVP 511
+L + D +W+ Y V ++GHT + + F P+ + TG+ D TV +W
Sbjct: 201 YLITGSDDHTAKVWD-YQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWHAT 259
Query: 512 TGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSV 691
T L V ++ G +G +V D+ +I + R+ PVAS D+S +
Sbjct: 260 TYRLENTLNYGLERVWAI-GHIKGSRRVVIGYDEGSIMVKLGRE-IPVASMDNSGKIIWA 317
Query: 692 LFNDT-AEKILSSGVDNV 742
N+ I S G D V
Sbjct: 318 KHNEIHTVNIKSVGADEV 335
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWN 376
+ LEGH + FHPE + + D + IW+
Sbjct: 222 VQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWH 257
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 71.3 bits (167), Expect = 8e-13
Identities = 45/167 (26%), Positives = 83/167 (49%), Gaps = 9/167 (5%)
Frame = +2
Query: 284 GHQGEIFTAKFHPEGKHLASAGFDRQILIWN-VYGQCENVMVMKG------HTGAIMQLC 442
G + A+F P+G+ LAS+ D I +W+ + G+ + + + H ++ +
Sbjct: 211 GKKSHAECARFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCID 270
Query: 443 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 622
FS D L +G+ D + +W + TG I++ H+ V S+S +R G +LL S S D T
Sbjct: 271 FSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLL-STSFDQTA 329
Query: 623 KLWDARKRNPVASF--DSSYPVTSVLFNDTAEKILSSGVDNVIKMWD 757
++ + + F +SY V +F +I+++ D +K+WD
Sbjct: 330 RIHGLKSGKLLKEFRGHTSY-VNHAIFTSDGSRIITASSDCTVKVWD 375
Score = 68.1 bits (159), Expect = 8e-12
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 1/133 (0%)
Frame = +2
Query: 287 HQGEIFTAKFHPEGKHLASAGFDRQILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSH 463
H + F + + LAS D +I IW + G C + H+ + L FS DGS
Sbjct: 262 HDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVC--IRRFDAHSQGVTSLSFSRDGSQ 319
Query: 464 LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK 643
L + + D T + + +G +K+ +GH ++VN G +++AS D T+K+WD++
Sbjct: 320 LLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSR-IITASSDCTVKVWDSKT 378
Query: 644 RNPVASFDSSYPV 682
+ + +F P+
Sbjct: 379 TDCLQTFKPPPPL 391
Score = 64.1 bits (149), Expect = 1e-10
Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 8/144 (5%)
Frame = +2
Query: 443 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHAN--FVNSVSGA-----RRGPELLVS 601
FSPDG L + + D + VWD +G K L+ A+ F+ R E+L S
Sbjct: 221 FSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLAS 280
Query: 602 ASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIX 778
S D IK+W R + FD+ S VTS+ F+ ++LS+ D ++ +++ ++
Sbjct: 281 GSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLL 340
Query: 779 LKIKGHTDTVTGLSLSWDGAYLLS 850
+ +GHT V + DG+ +++
Sbjct: 341 KEFRGHTSYVNHAIFTSDGSRIIT 364
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 70.9 bits (166), Expect = 1e-12
Identities = 34/100 (34%), Positives = 51/100 (51%)
Frame = +2
Query: 245 RTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTG 424
+T + P+ L+ H G I P K+LA+A D+ + IWNV G + V+ GH
Sbjct: 196 QTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWNVDG-FKLEKVLTGHQR 254
Query: 425 AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 544
+ FS DG L T ++D T +W +P G +K +GH
Sbjct: 255 WVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGH 294
Score = 69.3 bits (162), Expect = 3e-12
Identities = 46/179 (25%), Positives = 86/179 (48%), Gaps = 5/179 (2%)
Frame = +2
Query: 335 LASAGFDRQILIWNVY-GQC-ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 508
LA+A +D I W G+C + H + +L +PD H A + + ++DV
Sbjct: 8 LATASYDHTIRFWEAETGRCYRTIQYPDSH---VNRLEITPD-KHYLAAACNPHIRLFDV 63
Query: 509 PTGTR--IKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPV 682
+ + + H N V +V G + + + S S+D T+K+WD R ++S V
Sbjct: 64 NSNSPQPVMTYDSHTNNVMAV-GFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYESVAAV 122
Query: 683 TSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDT-VTGLSLSWDGAYLLSIN 856
+V+ + +++S + I++WD+R N ++ DT V L++ WDG +++ N
Sbjct: 123 NTVVLHPNQTELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMWDGTMVVAAN 181
Score = 50.4 bits (115), Expect = 2e-06
Identities = 29/93 (31%), Positives = 44/93 (47%)
Frame = +2
Query: 407 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 586
++ H G I++ SP +L T ++D TV +W+V K L GH +V + G
Sbjct: 207 LQAHNGHILKCLLSPANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDG- 265
Query: 587 ELLVSASDDNTIKLWDARKRNPVASFDSSYPVT 685
E LV+AS D T +LW V + + T
Sbjct: 266 EFLVTASSDMTARLWSMPAGKEVKVYQGHHKAT 298
Score = 46.8 bits (106), Expect = 2e-05
Identities = 39/209 (18%), Positives = 87/209 (41%), Gaps = 9/209 (4%)
Frame = +2
Query: 251 SNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAI 430
SN P+M + H + F + K + S D + IW++ + A+
Sbjct: 65 SNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDL--RAPGCQKEYESVAAV 122
Query: 431 MQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHAN-FVNSVSGARRGPELLVSAS 607
+ P+ + L +G + + VWD+ + +L + V S++ G ++V+A+
Sbjct: 123 NTVVLHPNQTELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMWDG-TMVVAAN 181
Query: 608 DDNTIKLWD-ARKRNPVASFDSSYP-------VTSVLFNDTAEKILSSGVDNVIKMWDIR 763
+ T +W R + + F+ + + L + + + ++ D +K+W++
Sbjct: 182 NRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWNVD 241
Query: 764 NNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
++ + GH V S DG +L++
Sbjct: 242 GFKLEKVLTGHQRWVWDCVFSVDGEFLVT 270
Score = 30.7 bits (66), Expect = 1.4
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Frame = +2
Query: 590 LLVSASDDNTIKLWDARKRNPVASFDSSYPVTSV-LFNDTAEK-ILSSGVDNVIKMWDIR 763
+L +AS D+TI+ W+A + YP + V T +K L++ + I+++D+
Sbjct: 7 ILATASYDHTIRFWEAETGRCYRTI--QYPDSHVNRLEITPDKHYLAAACNPHIRLFDVN 64
Query: 764 NN--QIXLKIKGHTDTVTGLSLSWDGAYLLS 850
+N Q + HT+ V + D ++ S
Sbjct: 65 SNSPQPVMTYDSHTNNVMAVGFQCDAKWMYS 95
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 70.1 bits (164), Expect = 2e-12
Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 4/190 (2%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLA-SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCF 445
I LL + ++ TA F+ G L Q+L+W+ + ++ +GH + + +
Sbjct: 299 IHLLSISRQKLTTAVFNERGNWLTFGCAKLGQLLVWDWRTETY-ILKQQGHYFDVNCVTY 357
Query: 446 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 625
SPD L TGA DN V VW+V +GT H N V ++ LL SAS D T++
Sbjct: 358 SPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLL-SASLDGTVR 416
Query: 626 LWDARKRNPVASFDSSYP--VTSVLFNDTAEKILSSGVDNV-IKMWDIRNNQIXLKIKGH 796
WD ++ ++ + P S+ + + + + + +D+ I +W + QI + GH
Sbjct: 417 AWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGH 476
Query: 797 TDTVTGLSLS 826
V GL S
Sbjct: 477 EAPVHGLMFS 486
Score = 50.4 bits (115), Expect = 2e-06
Identities = 23/89 (25%), Positives = 42/89 (47%)
Frame = +2
Query: 275 LLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPD 454
+L GH+ + F P + LAS+ +D + +W+V+ V + H ++ + F PD
Sbjct: 472 ILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFR-HNHDVLTVAFRPD 530
Query: 455 GSHLYTGATDNTVAVWDVPTGTRIKKLKG 541
G L + D + WD G + ++G
Sbjct: 531 GKQLASSTLDGQINFWDTIEGVLMYTIEG 559
Score = 39.1 bits (87), Expect = 0.004
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +2
Query: 320 PEGKHLASAGFDR-QILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTV 493
P G + + D +I +W+ GQ ++++ GH + L FSP L + + D TV
Sbjct: 444 PSGDVVCAGTLDSFEIFVWSKKTGQIKDIL--SGHEAPVHGLMFSPLTQLLASSSWDYTV 501
Query: 494 AVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD 634
+WDV + H + V +V+ G + L S++ D I WD
Sbjct: 502 RLWDVFASKGTVETFRHNHDVLTVAFRPDGKQ-LASSTLDGQINFWD 547
Score = 38.3 bits (85), Expect = 0.007
Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = +2
Query: 578 RGPELLVSASDDNTIKLWDARKRNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMW 754
RG L + + +WD R + Y V V ++ ++ + + DN +K+W
Sbjct: 317 RGNWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVW 376
Query: 755 DIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
++ + + HT+ VT L D LLS
Sbjct: 377 NVMSGTCFITFTEHTNAVTALHFMADNHSLLS 408
Score = 35.5 bits (78), Expect = 0.049
Identities = 34/138 (24%), Positives = 57/138 (41%), Gaps = 27/138 (19%)
Frame = +2
Query: 287 HQGEIFTAKFHPEGKHLASAGFDRQILIWN---------VYGQCENV--MVMKGHTGA-- 427
H ++ T F P+GK LAS+ D QI W+ + G+ + VM A
Sbjct: 518 HNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEGRRDIAGGRVMTDRRSAAN 577
Query: 428 ------IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK--------LKGHANFVNSV 565
LC+S DG ++ T + ++D+ +++ L G +F++S
Sbjct: 578 SSSGKCFTTLCYSADGGYILAAGTSRYICMYDIADQVLLRRFQISHNLSLDGVLDFLHSK 637
Query: 566 SGARRGPELLVSASDDNT 619
GP L+ DDN+
Sbjct: 638 KMTEAGPIDLI--DDDNS 653
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 70.1 bits (164), Expect = 2e-12
Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 4/190 (2%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLA-SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCF 445
I LL + ++ TA F+ G L Q+L+W+ + ++ +GH + + +
Sbjct: 339 IHLLSISRQKLTTAVFNERGNWLTFGCAKLGQLLVWDWRTETY-ILKQQGHYFDVNCVTY 397
Query: 446 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 625
SPD L TGA DN V VW+V +GT H N V ++ LL SAS D T++
Sbjct: 398 SPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLL-SASLDGTVR 456
Query: 626 LWDARKRNPVASFDSSYP--VTSVLFNDTAEKILSSGVDNV-IKMWDIRNNQIXLKIKGH 796
WD ++ ++ + P S+ + + + + + +D+ I +W + QI + GH
Sbjct: 457 AWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGH 516
Query: 797 TDTVTGLSLS 826
V GL S
Sbjct: 517 EAPVHGLMFS 526
Score = 50.4 bits (115), Expect = 2e-06
Identities = 23/89 (25%), Positives = 42/89 (47%)
Frame = +2
Query: 275 LLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPD 454
+L GH+ + F P + LAS+ +D + +W+V+ V + H ++ + F PD
Sbjct: 512 ILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFR-HNHDVLTVAFRPD 570
Query: 455 GSHLYTGATDNTVAVWDVPTGTRIKKLKG 541
G L + D + WD G + ++G
Sbjct: 571 GKQLASSTLDGQINFWDTIEGVLMYTIEG 599
Score = 39.1 bits (87), Expect = 0.004
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +2
Query: 320 PEGKHLASAGFDR-QILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTV 493
P G + + D +I +W+ GQ ++++ GH + L FSP L + + D TV
Sbjct: 484 PSGDVVCAGTLDSFEIFVWSKKTGQIKDIL--SGHEAPVHGLMFSPLTQLLASSSWDYTV 541
Query: 494 AVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD 634
+WDV + H + V +V+ G + L S++ D I WD
Sbjct: 542 RLWDVFASKGTVETFRHNHDVLTVAFRPDGKQ-LASSTLDGQINFWD 587
Score = 38.3 bits (85), Expect = 0.007
Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = +2
Query: 578 RGPELLVSASDDNTIKLWDARKRNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMW 754
RG L + + +WD R + Y V V ++ ++ + + DN +K+W
Sbjct: 357 RGNWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVW 416
Query: 755 DIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
++ + + HT+ VT L D LLS
Sbjct: 417 NVMSGTCFITFTEHTNAVTALHFMADNHSLLS 448
Score = 35.5 bits (78), Expect = 0.049
Identities = 34/138 (24%), Positives = 57/138 (41%), Gaps = 27/138 (19%)
Frame = +2
Query: 287 HQGEIFTAKFHPEGKHLASAGFDRQILIWN---------VYGQCENV--MVMKGHTGA-- 427
H ++ T F P+GK LAS+ D QI W+ + G+ + VM A
Sbjct: 558 HNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEGRRDIAGGRVMTDRRSAAN 617
Query: 428 ------IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK--------LKGHANFVNSV 565
LC+S DG ++ T + ++D+ +++ L G +F++S
Sbjct: 618 SSSGKCFTTLCYSADGGYILAAGTSRYICMYDIADQVLLRRFQISHNLSLDGVLDFLHSK 677
Query: 566 SGARRGPELLVSASDDNT 619
GP L+ DDN+
Sbjct: 678 KMTEAGPIDLI--DDDNS 693
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 68.1 bits (159), Expect = 8e-12
Identities = 53/182 (29%), Positives = 91/182 (50%), Gaps = 10/182 (5%)
Frame = +2
Query: 329 KHLASAGFDRQILIWNV----YGQCENVMVMKGHTGAIMQLCFSPDGSH-----LYTGAT 481
+++A++ DR I +W++ + + ++ GHT + L + P L +G+
Sbjct: 32 ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSFVGPLAWIPPTDEYPEGRLVSGSM 91
Query: 482 DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS 661
D V VW++ G I+ LKGH V+G E +VS+S D T+K W R V S
Sbjct: 92 DTFVFVWNLMNGENIQTLKGHQ---MQVTGVAIDNEDIVSSSVDQTLKRW--RNGQLVES 146
Query: 662 FDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGA 838
+D+ P+ +V+ + E ++S D +K+W + + GHTDTV GL++ D
Sbjct: 147 WDAHQSPIQAVIRLPSGE-LVSGSSDASLKLW--KGKTSLQTLSGHTDTVRGLAVMPDLG 203
Query: 839 YL 844
+L
Sbjct: 204 FL 205
Score = 64.5 bits (150), Expect = 9e-11
Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 7/220 (3%)
Frame = +2
Query: 188 HEISVVGTR--EKAVVTSSVPRTSNLYAPIMLLEG---HQGEIFTAKFHPEGKHLASAGF 352
H++ V G + +V+SSV +T + L+E HQ I P G+ L S
Sbjct: 112 HQMQVTGVAIDNEDIVSSSVDQTLKRWRNGQLVESWDAHQSPIQAVIRLPSGE-LVSGSS 170
Query: 353 DRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK 532
D + +W G+ ++ + GHT + L PD L + + D ++ +W + +G + +
Sbjct: 171 DASLKLWK--GKT-SLQTLSGHTDTVRGLAVMPDLGFL-SASHDGSIRLWAL-SGEVLLE 225
Query: 533 LKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAE 712
+ GH + V SV G L+VSAS+D K+W + V S + + F +T +
Sbjct: 226 MVGHTSLVYSVDAHSSG--LIVSASEDRHAKIW--KDGVCVQSLEHPGCIWDAKFLETGD 281
Query: 713 KILSSGVDNVIKMWDIRNNQI--XLKIKGHTDTVTGLSLS 826
I+++ D V+++W +R++ I ++I + ++ LS
Sbjct: 282 -IVTACSDGVVRVWTVRHDAIADQMEIDAYDSQISQYKLS 320
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 68.1 bits (159), Expect = 8e-12
Identities = 53/182 (29%), Positives = 91/182 (50%), Gaps = 10/182 (5%)
Frame = +2
Query: 329 KHLASAGFDRQILIWNV----YGQCENVMVMKGHTGAIMQLCFSPDGSH-----LYTGAT 481
+++A++ DR I +W++ + + ++ GHT + L + P L +G+
Sbjct: 32 ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSFVGPLAWIPPTDEYPEGRLVSGSM 91
Query: 482 DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS 661
D V VW++ G I+ LKGH V+G E +VS+S D T+K W R V S
Sbjct: 92 DTFVFVWNLMNGENIQTLKGHQ---MQVTGVAIDNEDIVSSSVDQTLKRW--RNGQLVES 146
Query: 662 FDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGA 838
+D+ P+ +V+ + E ++S D +K+W + + GHTDTV GL++ D
Sbjct: 147 WDAHQSPIQAVIRLPSGE-LVSGSSDASLKLW--KGKTSLQTLSGHTDTVRGLAVMPDLG 203
Query: 839 YL 844
+L
Sbjct: 204 FL 205
Score = 64.5 bits (150), Expect = 9e-11
Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 7/220 (3%)
Frame = +2
Query: 188 HEISVVGTR--EKAVVTSSVPRTSNLYAPIMLLEG---HQGEIFTAKFHPEGKHLASAGF 352
H++ V G + +V+SSV +T + L+E HQ I P G+ L S
Sbjct: 112 HQMQVTGVAIDNEDIVSSSVDQTLKRWRNGQLVESWDAHQSPIQAVIRLPSGE-LVSGSS 170
Query: 353 DRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK 532
D + +W G+ ++ + GHT + L PD L + + D ++ +W + +G + +
Sbjct: 171 DASLKLWK--GKT-SLQTLSGHTDTVRGLAVMPDLGFL-SASHDGSIRLWAL-SGEVLLE 225
Query: 533 LKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAE 712
+ GH + V SV G L+VSAS+D K+W + V S + + F +T +
Sbjct: 226 MVGHTSLVYSVDAHSSG--LIVSASEDRHAKIW--KDGVCVQSLEHPGCIWDAKFLETGD 281
Query: 713 KILSSGVDNVIKMWDIRNNQI--XLKIKGHTDTVTGLSLS 826
I+++ D V+++W +R++ I ++I + ++ LS
Sbjct: 282 -IVTACSDGVVRVWTVRHDAIADQMEIDAYDSQISQYKLS 320
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 68.1 bits (159), Expect = 8e-12
Identities = 32/108 (29%), Positives = 55/108 (50%)
Frame = +2
Query: 338 ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG 517
AS+GFD +W++ N+++ +GH ++ + FSP+G HL +G DN +WD+
Sbjct: 146 ASSGFDSLARVWDLR-TARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMR 204
Query: 518 TRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS 661
+ + H N V+ V + L +AS D + +W R + V S
Sbjct: 205 KLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKS 252
Score = 55.6 bits (128), Expect = 4e-08
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFS 448
I++ +GH ++ + F P G HLAS G D Q IW++ + + + ++ H + Q+ +
Sbjct: 165 ILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMR-KLLYIIPAHVNLVSQVKYE 223
Query: 449 PDGSH-LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV 565
P + L T + D V +W + +K L GH + V S+
Sbjct: 224 PQERYFLATASHDMNVNIWSGRDFSLVKSLVGHESKVASL 263
Score = 54.4 bits (125), Expect = 1e-07
Identities = 43/178 (24%), Positives = 71/178 (39%), Gaps = 2/178 (1%)
Frame = +2
Query: 323 EGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAV 499
+GK L + +W V ++V+KGH + + FS D L T +TD T +
Sbjct: 74 DGKILVTCSLSGVPKLWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDECLATASTDRTEKI 133
Query: 500 WDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP 679
W GT ++ K + F D+ ++WD R + F
Sbjct: 134 WKTD-GTLLQTFKASSGF-------------------DSLARVWDLRTARNILIFQGHIK 173
Query: 680 -VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
V SV F+ + S G DN ++WD+R ++ I H + V+ + Y L+
Sbjct: 174 QVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQERYFLA 231
Score = 48.8 bits (111), Expect = 5e-06
Identities = 42/136 (30%), Positives = 60/136 (44%), Gaps = 1/136 (0%)
Frame = +2
Query: 446 SPDGSHLYTGATDNTVAVWDVPTGT-RIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 622
S DG L T + +W+VP T +I LKGH V V + E L +AS D T
Sbjct: 72 SRDGKILVTCSLSGVPKLWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDECLATASTDRTE 131
Query: 623 KLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTD 802
K+W D + T F SSG D++ ++WD+R + L +GH
Sbjct: 132 KIWKT---------DGTLLQT---FK------ASSGFDSLARVWDLRTARNILIFQGHIK 173
Query: 803 TVTGLSLSWDGAYLLS 850
V + S +G +L S
Sbjct: 174 QVLSVDFSPNGYHLAS 189
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 67.7 bits (158), Expect = 1e-11
Identities = 49/195 (25%), Positives = 90/195 (46%), Gaps = 4/195 (2%)
Frame = +2
Query: 275 LLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVY--GQCENVMVMKGHTGAIMQLCFS 448
+LE H E++ +F GK+LAS+ D+ +IW + G + GH ++ + +S
Sbjct: 269 ILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWS 328
Query: 449 PDGSHLYTGATDNTVAVWDVPTGTRIKKL-KGHANFVNSVSGARRGPELLVSASDDNTIK 625
PD + T + + WDV +G + KG + ++ G + +++ D +I
Sbjct: 329 PDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPIS--CGWYPDGQGIIAGMTDRSIC 386
Query: 626 LWDARKRNPVA-SFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTD 802
+WD R + V+ + D + ++S D+VI ++D R + I+ D
Sbjct: 387 MWDLDGREKECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFD-REATVERLIE-EED 444
Query: 803 TVTGLSLSWDGAYLL 847
+T SLS D Y+L
Sbjct: 445 MITSFSLSNDNKYIL 459
Score = 66.1 bits (154), Expect = 3e-11
Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
Frame = +2
Query: 323 EGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGA--IMQLCFSP-DGSHLYTGATDNTV 493
+ K++ +++I +WN+ G + V KGH + I++ CF + + +G+ D+ V
Sbjct: 454 DNKYILVNLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQV 513
Query: 494 AVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRN 649
+W TG I +L GHA VN VS + +L SASDD TI++W + N
Sbjct: 514 YIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDRIN 565
Score = 51.2 bits (117), Expect = 9e-07
Identities = 34/159 (21%), Positives = 74/159 (46%), Gaps = 5/159 (3%)
Frame = +2
Query: 392 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIK---KLKGHANFVNS 562
+ +++ HT + L FS +G +L + + D T +W++ I L GH V +
Sbjct: 265 QTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIA 324
Query: 563 VSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSS--YPVTSVLFNDTAEKILSSGVD 736
+ + ++L +++ I+ WD + V ++ P++ + D + I++ D
Sbjct: 325 ILWSPDDRQVLTCGAEE-VIRRWDVDSGDCVHMYEKGGISPISCGWYPD-GQGIIAGMTD 382
Query: 737 NVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLSI 853
I MWD+ + T V+ ++++ DG +L+S+
Sbjct: 383 RSICMWDLDGREKECWKGQRTQKVSDIAMTDDGKWLVSV 421
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 67.3 bits (157), Expect = 1e-11
Identities = 38/138 (27%), Positives = 69/138 (50%), Gaps = 3/138 (2%)
Frame = +2
Query: 245 RTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTG 424
R NL + + + I + +GK ++I +W++ G+ + + GH
Sbjct: 382 RILNLETKVERVISEEQPITSLSISGDGKFFIVNLSCQEIHLWDLAGEWKQPLKFSGHRQ 441
Query: 425 A--IMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 595
+ +++ CF D S + +G+ D+ V +W++ ++ L GH+ VN VS + P +L
Sbjct: 442 SKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRML 501
Query: 596 VSASDDNTIKLWDARKRN 649
SASDD TI++W K N
Sbjct: 502 ASASDDQTIRIWGPGKPN 519
Score = 62.9 bits (146), Expect = 3e-10
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 7/200 (3%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVY--GQCENVMVMKGHTGAIMQLC 442
+ +L H+ E++ +F GK+LA+A D +IW V + E ++ H + +
Sbjct: 217 VQILVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVS 276
Query: 443 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE---LLVSASD- 610
+SPD + L T + +WDV TG ++ G+ N +VS P+ L+ +SD
Sbjct: 277 WSPDDTKLLTCGNAEVLKLWDVDTGV-LRHTFGNNNTGFTVSSCAWFPDSTRLVCGSSDP 335
Query: 611 DNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKI 787
+ I +WD A + P V + E +++ D I++ ++ ++
Sbjct: 336 ERGIVMWDTDGNEIKAWRGTRIPKVVDLAVTPDGESMITVFSDKEIRILNLETK--VERV 393
Query: 788 KGHTDTVTGLSLSWDGAYLL 847
+T LS+S DG + +
Sbjct: 394 ISEEQPITSLSISGDGKFFI 413
Score = 53.2 bits (122), Expect = 2e-07
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 8/162 (4%)
Frame = +2
Query: 392 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIK---KLKGHANFVNS 562
E V ++ H + + FS G +L T ++D T +W V +++ L+ H N V+
Sbjct: 215 ETVQILVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSF 274
Query: 563 VSGARRGPELLVSASDDNTIKLWDARK---RNPVASFDSSYPVTSVL-FNDTAEKIL-SS 727
VS + +LL + + +KLWD R+ + ++ + V+S F D+ + SS
Sbjct: 275 VSWSPDDTKLLTCGNAE-VLKLWDVDTGVLRHTFGNNNTGFTVSSCAWFPDSTRLVCGSS 333
Query: 728 GVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLSI 853
+ I MWD N+I V L+++ DG ++++
Sbjct: 334 DPERGIVMWDTDGNEIKAWRGTRIPKVVDLAVTPDGESMITV 375
Score = 42.7 bits (96), Expect = 3e-04
Identities = 39/186 (20%), Positives = 82/186 (44%), Gaps = 8/186 (4%)
Frame = +2
Query: 299 IFTAKFHPEGKHLASAGFD--RQILIWNVYGQCENVMVMKG-HTGAIMQLCFSPDGSHLY 469
+ + + P+ L D R I++W+ G + +G ++ L +PDG +
Sbjct: 316 VSSCAWFPDSTRLVCGSSDPERGIVMWDTDGN--EIKAWRGTRIPKVVDLAVTPDGESMI 373
Query: 470 TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD--ARK 643
T +D + + ++ T +++++ + S+S + G +V+ S I LWD
Sbjct: 374 TVFSDKEIRILNLET--KVERVISEEQPITSLSISGDGKFFIVNLSCQE-IHLWDLAGEW 430
Query: 644 RNPV---ASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTG 814
+ P+ S Y + S + I S D+ + +W+++N + + GH+ TV
Sbjct: 431 KQPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVN- 489
Query: 815 LSLSWD 832
+SW+
Sbjct: 490 -CVSWN 494
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 67.3 bits (157), Expect = 1e-11
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 13/174 (7%)
Frame = +2
Query: 272 MLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYG-QCENVMVMKGHTGAIMQLCFS 448
+L E H + + + P G+ LA+A FD IW YG + E + ++GH + + ++
Sbjct: 68 VLEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWN 127
Query: 449 PDGSHLYTGATDNTVAVWDVPTGTR---IKKLKGHANFVNSVSGARRGPELLVSASDDNT 619
GS L T + D +V +W+V G L GH V V ++L S S DNT
Sbjct: 128 ASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQW-HPTMDVLFSCSYDNT 186
Query: 620 IKLW----DARKRNPVASFDS-----SYPVTSVLFNDTAEKILSSGVDNVIKMW 754
IK+W D + V + S V S+ FN +K+++ D +K+W
Sbjct: 187 IKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIW 240
Score = 59.3 bits (137), Expect = 3e-09
Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 10/131 (7%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVY--GQCENVMVMKGHTGAIMQLC 442
I LEGH+ E+ + ++ G LA+ D+ + IW V + + V+ GHT + +
Sbjct: 111 ISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQ 170
Query: 443 FSPDGSHLYTGATDNTVAVW--DVPTG------TRIKKLKGHANFVNSVSGARRGPELLV 598
+ P L++ + DNT+ VW + G T + GH++ V S+S G + +V
Sbjct: 171 WHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAG-DKMV 229
Query: 599 SASDDNTIKLW 631
+ SDD T+K+W
Sbjct: 230 TCSDDLTLKIW 240
Score = 41.9 bits (94), Expect = 6e-04
Identities = 38/137 (27%), Positives = 59/137 (43%), Gaps = 21/137 (15%)
Frame = +2
Query: 284 GHQGEIFTAKFHPEGKHLASAGFDRQILIWNV----------YGQCENVMVMKG-HTGAI 430
GH +++ F+ G + + D + IW Y ++ + G H I
Sbjct: 211 GHSSTVWSISFNAAGDKMVTCSDDLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDRTI 270
Query: 431 MQLCFSPDGSHLYTGATDNTVAVW--------DVPT-GTRIKKLKGHANFVNSVSGAR-R 580
+S D + +GA DN + ++ D P+ +KK K H N VNSV +
Sbjct: 271 YSAHWSRDDI-IASGAGDNAIRLFVDSKHDSVDGPSYNLLLKKNKAHENDVNSVQWSPGE 329
Query: 581 GPELLVSASDDNTIKLW 631
G LL SASDD +K+W
Sbjct: 330 GNRLLASASDDGMVKIW 346
Score = 39.5 bits (88), Expect = 0.003
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 7/117 (5%)
Frame = +2
Query: 209 TREKAVVTSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIW---NV 379
+R+K+V V N Y +L GH ++ ++HP L S +D I +W +
Sbjct: 137 SRDKSVWIWEVLE-GNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSEDD 195
Query: 380 YGQCENVMVM----KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 538
G+ + V + GH+ + + F+ G + T + D T+ +W GT I K++
Sbjct: 196 DGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIW----GTDIAKMQ 248
Score = 36.3 bits (80), Expect = 0.028
Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 18/155 (11%)
Frame = +2
Query: 398 VMVMKGHTGAIMQLCFSPDGSH-------LYTGATDNTVAVWDVPTGTRIKKLK-----G 541
+ ++GHT + + ++P SH L + + DNTV +W+ + +R K
Sbjct: 13 IQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEET 72
Query: 542 HANFVNSVSGARRGPELLVSASDDNTIKLWD--ARKRNPVASFDS-SYPVTSVLFNDTAE 712
H V S + + G +LL +AS D T +W + +++ + V SV +N +
Sbjct: 73 HTRTVRSCAWSPSG-QLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGS 131
Query: 713 KILSSGVDNVIKMWDI-RNNQIXLK--IKGHTDTV 808
+ + D + +W++ N+ + GHT V
Sbjct: 132 CLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDV 166
Score = 31.5 bits (68), Expect = 0.80
Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 14/121 (11%)
Frame = +2
Query: 524 IKKLKGHANFV-----NSVSGARRGPE-LLVSASDDNTIKLWDARKRN------PVASFD 667
I+KL+GH + V N VS G +L S S DNT+++W+ + V
Sbjct: 13 IQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEET 72
Query: 668 SSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXL--KIKGHTDTVTGLSLSWDGAY 841
+ V S ++ + + + ++ D +W ++ ++GH + V +S + G+
Sbjct: 73 HTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSC 132
Query: 842 L 844
L
Sbjct: 133 L 133
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 66.9 bits (156), Expect = 2e-11
Identities = 41/147 (27%), Positives = 76/147 (51%), Gaps = 4/147 (2%)
Frame = +2
Query: 329 KHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 508
+++ S G + + IW++ + + +KGHT I + ++ HL + + + V ++
Sbjct: 106 RYICSGGTGQIVKIWDLQRKL-CIKKLKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNL 164
Query: 509 PTGTRIKKLKG-HANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASF--DSSYP 679
+G R +LK + + + +R LLV+A DD T+ LWD R+P S+ S P
Sbjct: 165 ASGARATELKDPNGQVLRLLDYSRSSRHLLVTAGDDGTVHLWDTTGRSPKMSWLKQHSAP 224
Query: 680 VTSVLFNDTAEKILSS-GVDNVIKMWD 757
V F+ + EKI++S G+D + +D
Sbjct: 225 TAGVCFSPSNEKIIASVGMDKKLYTYD 251
Score = 52.8 bits (121), Expect = 3e-07
Identities = 43/200 (21%), Positives = 84/200 (42%), Gaps = 4/200 (2%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLC-F 445
I L+GH I ++ + +HLAS +++ N+ +K G +++L +
Sbjct: 128 IKKLKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNL-ASGARATELKDPNGQVLRLLDY 186
Query: 446 SPDGSH-LYTGATDNTVAVWDVP-TGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNT 619
S H L T D TV +WD ++ LK H+ V + +++ S D
Sbjct: 187 SRSSRHLLVTAGDDGTVHLWDTTGRSPKMSWLKQHSAPTAGVCFSPSNEKIIASVGMDKK 246
Query: 620 IKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNN-QIXLKIKGH 796
+ +D+ R + P +S+ F D +++ + + +DIR Q +
Sbjct: 247 LYTYDSGSRRSSSCIAYEAPFSSLAFGDNGYILVAGTSNGRVVFYDIRGKPQPVTVLHAF 306
Query: 797 TDTVTGLSLSWDGAYLLSIN 856
+++ SLSW + + +N
Sbjct: 307 SNSEDVTSLSWQTSKPVIVN 326
Score = 44.8 bits (101), Expect = 8e-05
Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Frame = +2
Query: 590 LLVSASDDNTIKLWDARKRN----PVASFDSSYP----VTSVLFNDTAEK-ILSSGVDNV 742
++ S +D I LW ++ PV D ++++ F+ + I S G +
Sbjct: 57 VVASTGEDKKISLWRKNGQSLGTVPVTGKDGGDSAEECLSAISFSKKGSRYICSGGTGQI 116
Query: 743 IKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLSIN 856
+K+WD++ K+KGHT T+TG+ + +L S++
Sbjct: 117 VKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVS 154
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 66.5 bits (155), Expect = 2e-11
Identities = 45/162 (27%), Positives = 68/162 (41%), Gaps = 1/162 (0%)
Frame = +2
Query: 191 EISVVGTREKAVVTSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILI 370
++ + + +K V P N YA L H E+ HP K+ SA D
Sbjct: 277 DLVLTASADKTVRIWRNPGDGN-YACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCF 335
Query: 371 WNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 547
+++ G C + F PDG L TG + + V +WDV + + K GH
Sbjct: 336 YDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHT 395
Query: 548 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSS 673
V ++S + G L +A D ++LWD RK SF S+
Sbjct: 396 GEVTAISFSENGYFLATAAEDG--VRLWDLRKLRNFKSFLSA 435
Score = 60.1 bits (139), Expect = 2e-09
Identities = 33/166 (19%), Positives = 80/166 (48%), Gaps = 4/166 (2%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENV--MVMKGHTGAIMQLCFSP 451
L GH ++ + KF + + +A D+ + IW G + H+ + + P
Sbjct: 260 LTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHP 319
Query: 452 DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLV-SASDDNTIKL 628
+ + + D T +D+ +G+ + ++ + V+ + A L++ + + + +K+
Sbjct: 320 TNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKI 379
Query: 629 WDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDIR 763
WD + + VA FD + VT++ F++ L++ ++ +++WD+R
Sbjct: 380 WDVKSQANVAKFDGHTGEVTAISFSENG-YFLATAAEDGVRLWDLR 424
Score = 53.6 bits (123), Expect = 2e-07
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 8/178 (4%)
Frame = +2
Query: 335 LASAGFDRQILIWN-VYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVP 511
+A+ G D ++++ GQ + + GH+ + + F D + T + D TV +W P
Sbjct: 237 IATGGVDATAVLFDRPSGQI--LSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNP 294
Query: 512 TGTRIK---KLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASF-DSSYP 679
L H+ V +V+ + VSAS D T +D + +A D S
Sbjct: 295 GDGNYACGYTLNDHSAEVRAVT-VHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKN 353
Query: 680 V--TSVLFNDTAEKILSSGVD-NVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYL 844
V T+ F+ IL +G +V+K+WD+++ K GHT VT +S S +G +L
Sbjct: 354 VDYTAAAFHPDG-LILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFL 410
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 66.5 bits (155), Expect = 2e-11
Identities = 45/162 (27%), Positives = 68/162 (41%), Gaps = 1/162 (0%)
Frame = +2
Query: 191 EISVVGTREKAVVTSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILI 370
++ + + +K V P N YA L H E+ HP K+ SA D
Sbjct: 277 DLVLTASADKTVRIWRNPGDGN-YACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCF 335
Query: 371 WNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 547
+++ G C + F PDG L TG + + V +WDV + + K GH
Sbjct: 336 YDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHT 395
Query: 548 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSS 673
V ++S + G L +A D ++LWD RK SF S+
Sbjct: 396 GEVTAISFSENGYFLATAAEDG--VRLWDLRKLRNFKSFLSA 435
Score = 60.1 bits (139), Expect = 2e-09
Identities = 33/166 (19%), Positives = 80/166 (48%), Gaps = 4/166 (2%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENV--MVMKGHTGAIMQLCFSP 451
L GH ++ + KF + + +A D+ + IW G + H+ + + P
Sbjct: 260 LTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHP 319
Query: 452 DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLV-SASDDNTIKL 628
+ + + D T +D+ +G+ + ++ + V+ + A L++ + + + +K+
Sbjct: 320 TNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKI 379
Query: 629 WDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDIR 763
WD + + VA FD + VT++ F++ L++ ++ +++WD+R
Sbjct: 380 WDVKSQANVAKFDGHTGEVTAISFSENG-YFLATAAEDGVRLWDLR 424
Score = 53.6 bits (123), Expect = 2e-07
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 8/178 (4%)
Frame = +2
Query: 335 LASAGFDRQILIWN-VYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVP 511
+A+ G D ++++ GQ + + GH+ + + F D + T + D TV +W P
Sbjct: 237 IATGGVDATAVLFDRPSGQI--LSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNP 294
Query: 512 TGTRIK---KLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASF-DSSYP 679
L H+ V +V+ + VSAS D T +D + +A D S
Sbjct: 295 GDGNYACGYTLNDHSAEVRAVT-VHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKN 353
Query: 680 V--TSVLFNDTAEKILSSGVD-NVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYL 844
V T+ F+ IL +G +V+K+WD+++ K GHT VT +S S +G +L
Sbjct: 354 VDYTAAAFHPDG-LILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFL 410
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 66.1 bits (154), Expect = 3e-11
Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 2/182 (1%)
Frame = +2
Query: 281 EGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGS 460
+ H E +G++LA+ G DR + IW+V + E+V GH + LCF S
Sbjct: 219 KNHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTR-EHVQAFPGHRNTVSCLCFRYGTS 277
Query: 461 HLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDAR 640
LY+G+ D TV VW+V I + GH + ++ R+ E ++ D T+
Sbjct: 278 ELYSGSFDRTVKVWNVEDKAFITENHGHQGEILAIDALRK--ERALTVGRDRTMLYHKVP 335
Query: 641 KRNPVASFDSSYPVTSVLFNDTAEKILSSGVDN-VIKMWD-IRNNQIXLKIKGHTDTVTG 814
+ + + + S F E + SG DN + +W ++ + + H D G
Sbjct: 336 ESTRMIYRAPASSLESCCFISDNEYL--SGSDNGTVALWGMLKKKPVFVFKNAHQDIPDG 393
Query: 815 LS 820
++
Sbjct: 394 IT 395
Score = 44.4 bits (100), Expect = 1e-04
Identities = 36/136 (26%), Positives = 56/136 (41%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFS 448
+ GH+ + F L S FDR + +WNV + + GH G I+ +
Sbjct: 257 VQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVEDKA-FITENHGHQGEILAIDAL 315
Query: 449 PDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKL 628
L G D T+ VP TR+ + A+ + S L S SD+ T+ L
Sbjct: 316 RKERALTVG-RDRTMLYHKVPESTRM-IYRAPASSLESCCFISDNEYL--SGSDNGTVAL 371
Query: 629 WDARKRNPVASFDSSY 676
W K+ PV F +++
Sbjct: 372 WGMLKKKPVFVFKNAH 387
Score = 34.3 bits (75), Expect = 0.11
Identities = 33/149 (22%), Positives = 62/149 (41%)
Frame = +2
Query: 404 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 583
V+ H +++ + S D S ++ + D T+ WDV +G K +
Sbjct: 156 VIVKHRRSVVSVALSDDDSRGFSASKDGTIMHWDVSSGKTDKYIWP-------------S 202
Query: 584 PELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIR 763
E+L S + +KL + R +N S ++ + + + GVD + +WD+R
Sbjct: 203 DEILKS----HGMKLREPRNKN------HSRESLALAVSSDGRYLATGGVDRHVHIWDVR 252
Query: 764 NNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
+ GH +TV+ L + + L S
Sbjct: 253 TREHVQAFPGHRNTVSCLCFRYGTSELYS 281
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 65.7 bits (153), Expect = 4e-11
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 4/198 (2%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFS 448
+ + GHQ T + L+S DR IL ++ Q + V + GH + L +S
Sbjct: 250 VRTMGGHQTR--TGVLAWNSRILSSGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWS 307
Query: 449 PDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVS--ASDDNTI 622
D L +G DN + VW+ + I KL H V +++ + LL S + D I
Sbjct: 308 HDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQSSLLASGGGTADRCI 367
Query: 623 KLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSG--VDNVIKMWDIRNNQIXLKIKGH 796
+ W+ N + S D+ V ++ ++ +I+S+ N I +W + + GH
Sbjct: 368 RFWNTTNGNQLNSIDTGSQVCNLAWSKNVNEIVSTHGYSQNQIMLWKYPSMSKVATLTGH 427
Query: 797 TDTVTGLSLSWDGAYLLS 850
+ V L+ S DG +++
Sbjct: 428 SMRVLYLATSPDGQTIVT 445
Score = 52.0 bits (119), Expect = 5e-07
Identities = 39/181 (21%), Positives = 77/181 (42%), Gaps = 2/181 (1%)
Frame = +2
Query: 329 KHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 508
+++ + G + +W + G ++ + ++ +GS++ G + V VWD
Sbjct: 185 QNVLAVGLGTCVYLWTASNSKVTKLCDLGPNDSVCSVQWTREGSYISIGTSHGQVQVWDG 244
Query: 509 PTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS--FDSSYPV 682
R++ + GH ++ R +L S S D I D R ++ S V
Sbjct: 245 TQCKRVRTMGGHQTRTGVLAWNSR---ILSSGSRDRNILQHDIRVQSDFVSKLVGHKSEV 301
Query: 683 TSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLSINGY 862
+ ++ ++ S G DN + +W+ + Q LK+ HT V ++ S + LL+ G
Sbjct: 302 CGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQSSLLASGGG 361
Query: 863 T 865
T
Sbjct: 362 T 362
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +2
Query: 359 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 508
QI++W Y V + GH+ ++ L SPDG + TGA D T+ W+V
Sbjct: 409 QIMLWK-YPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNV 457
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/70 (22%), Positives = 28/70 (40%)
Frame = +2
Query: 173 SKRVRHEISVVGTREKAVVTSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGF 352
SK V +S G + ++ P S + L GH + P+G+ + +
Sbjct: 393 SKNVNEIVSTHGYSQNQIMLWKYPSMSK----VATLTGHSMRVLYLATSPDGQTIVTGAG 448
Query: 353 DRQILIWNVY 382
D + WNV+
Sbjct: 449 DETLRFWNVF 458
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 65.7 bits (153), Expect = 4e-11
Identities = 31/78 (39%), Positives = 47/78 (60%)
Frame = +2
Query: 398 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGAR 577
VM ++GHT ++ L +SPD S L +G+ DNTV +W++ TG L+GH + V V+
Sbjct: 111 VMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDP 170
Query: 578 RGPELLVSASDDNTIKLW 631
G + S SDD T+ +W
Sbjct: 171 IG-SFIASQSDDKTVIIW 187
Score = 54.0 bits (124), Expect = 1e-07
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = +2
Query: 230 TSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNV-YGQCENVMV 406
+ P N A +M L GH ++ + P+ LAS D + IWN+ G C V
Sbjct: 99 SGEAPDVENWKA-VMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMC--TTV 155
Query: 407 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 544
++GH + + + P GS + + + D TV +W + GH
Sbjct: 156 LRGHLSLVKGVTWDPIGSFIASQSDDKTVIIWRTSDWGMAHRTDGH 201
Score = 38.3 bits (85), Expect = 0.007
Identities = 40/168 (23%), Positives = 70/168 (41%), Gaps = 23/168 (13%)
Frame = +2
Query: 416 HTGA-IMQLCFSPDGSHLYTGATDNTVAVWD---VPTGTRI-KKLKGHANFVNSVSGARR 580
H G I + P+G TG D+ D + T R+ L+ H VN V A+
Sbjct: 11 HEGLQIFSIDVQPNGERFATGGGDHKSVDKDLQNIDTKERLLATLRDHFGSVNCVRWAKN 70
Query: 581 GPELLVSASDDNTIKLWDARKRNPVASFDS-------SYPVTSVLFNDTAEKI------- 718
+ S SDD I++ + + + F S ++ L TA+ +
Sbjct: 71 S-RYVASGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWKAVMTLRGHTADVVDLNWSPD 129
Query: 719 ---LSSG-VDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
L+SG +DN + +W++R ++GH V G++ G+++ S
Sbjct: 130 DSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFIAS 177
Score = 33.9 bits (74), Expect = 0.15
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 335 LASAGFDRQILIWNVYGQCENVMVMKGHTG-AIMQLCFSPDGSHLYTGATDNTVAV 499
+A DR I +W G + V K G +++ L +SPDG L+ + D TVA+
Sbjct: 300 IAMGSQDRTITVWTT-GSARPLFVAKHFFGQSVVDLSWSPDGYSLFACSLDGTVAM 354
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 65.7 bits (153), Expect = 4e-11
Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 11/176 (6%)
Frame = +2
Query: 266 PIMLLEGHQGEIFTAKFHP--EGKHLASAGFDRQILIWNVYGQCEN-----VMVMKGHTG 424
P + L GH E + + P EG +L S D++I +W+V ++ + V +GH
Sbjct: 160 PDLRLVGHDKEGYGLSWSPFKEG-YLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHES 218
Query: 425 AIMQLCFSPDGSHLYTGA-TDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVS 601
AI + + +L+ A D + +WD T ++K H VN +S +L +
Sbjct: 219 AIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLAT 278
Query: 602 ASDDNTIKLWDARKRNPVASFDSSY--PVTSVLFNDTAEKIL-SSGVDNVIKMWDI 760
AS D+T+ L+D RK N SS+ V V ++ E +L SSG D + +WD+
Sbjct: 279 ASSDSTVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDL 334
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/42 (35%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = +2
Query: 257 LYAPIMLLEGHQGEIFTAKFHPEGKH-LASAGFDRQILIWNV 379
L AP+ ++ H+GE+F ++ P + LAS+G DR++++W++
Sbjct: 293 LNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDL 334
Score = 33.1 bits (72), Expect = 0.26
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Frame = +2
Query: 530 KLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD--ARKRNPVASFDSSYP-----VTS 688
+L GH +S + L+S S D I LWD A ++ V + Y +
Sbjct: 163 RLVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIAD 222
Query: 689 VLFNDTAEKIL-SSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLS 826
V ++ E + S+G D + +WD R NQ+ ++K H V LS +
Sbjct: 223 VSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFN 269
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 64.9 bits (151), Expect = 7e-11
Identities = 45/197 (22%), Positives = 88/197 (44%), Gaps = 4/197 (2%)
Frame = +2
Query: 284 GHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSH 463
GH ++ + +HP L S G D+ + +W+ E + + GH ++ + ++ +G+
Sbjct: 266 GHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRE-LCSLHGHKNIVLSVKWNQNGNW 324
Query: 464 LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK 643
L T + D + ++D+ T ++ +GH V S++ E VS S D +I W
Sbjct: 325 LLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGH 384
Query: 644 RNPVASFDSSY--PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQI--XLKIKGHTDTVT 811
NP +++ V + ++ + S D+ K W RN + +T
Sbjct: 385 ENPQIEIPNAHDNSVWDLAWHPIGYLLCSGSNDHTTKFW-CRNRPADNPRDVLMQNQGLT 443
Query: 812 GLSLSWDGAYLLSINGY 862
G +L+ G+ + S NG+
Sbjct: 444 GQALA--GSVIYSYNGW 458
Score = 57.2 bits (132), Expect = 1e-08
Identities = 44/198 (22%), Positives = 83/198 (41%), Gaps = 21/198 (10%)
Frame = +2
Query: 320 PEGKHLASAGFDRQILIWNVYGQCENV-MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVA 496
P G+ L + + +WN GQ N M+++ H I + +S + +++ +G T+
Sbjct: 133 PSGRRLITGSQSGEFTLWN--GQSFNFEMILQAHDQPIRSMVWSHNENYMVSGDDGGTLK 190
Query: 497 VWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDS-- 670
W H + +S + + S SDD T+K+WD K +S
Sbjct: 191 YWQNNMNNVKANKTAHKESIRDLSFCKTDLKFC-SCSDDTTVKVWDFTKCVDESSLTGYI 249
Query: 671 ------------------SYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGH 796
+ V SV ++ T ++S G D ++K+WD R+ + + GH
Sbjct: 250 GKGVIEIRFGVMPCNAGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGH 309
Query: 797 TDTVTGLSLSWDGAYLLS 850
+ V + + +G +LL+
Sbjct: 310 KNIVLSVKWNQNGNWLLT 327
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 1/112 (0%)
Frame = +2
Query: 425 AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSA 604
+I ++ ++P G L TG+ +W+ + L+ H + S+ + +VS
Sbjct: 125 SINRVLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWS-HNENYMVSG 183
Query: 605 SDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWD 757
D T+K W N A+ + + + F T K S D +K+WD
Sbjct: 184 DDGGTLKYWQNNMNNVKANKTAHKESIRDLSFCKTDLKFCSCSDDTTVKVWD 235
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 64.5 bits (150), Expect = 9e-11
Identities = 48/196 (24%), Positives = 87/196 (44%), Gaps = 14/196 (7%)
Frame = +2
Query: 263 APIMLLEGHQGEIFTAKFHPEGKHLASAG-FDRQILIWNV--YGQCENVMVMK------- 412
A I +LE E++ +F P+G LA AG + +W+ + + + +
Sbjct: 93 ATIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKPS 152
Query: 413 GHTGA---IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 583
T + ++ + +SP+G L G+ D T+ V+DV + +L+GH V S+ +
Sbjct: 153 DKTSSKKFVLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVD 212
Query: 584 PELLVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIKMWDI 760
P +L S SDD + + DA + + S V SV + I + D +++WD+
Sbjct: 213 PRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDL 272
Query: 761 RNNQIXLKIKGHTDTV 808
+ + H D V
Sbjct: 273 KMRAAIQTMSNHNDQV 288
Score = 56.8 bits (131), Expect = 2e-08
Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 8/127 (6%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHP-EGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPD 454
LEGH + + F P + + L S D + + + G+ + M GHT ++ + SPD
Sbjct: 196 LEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTL-LGSMSGHTSWVLSVDASPD 254
Query: 455 GSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV-------SGARRGPELLVSASDD 613
G + TG++D TV +WD+ I+ + H + V SV +G R G L S SDD
Sbjct: 255 GGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRPPGGTGVRAG--RLASVSDD 312
Query: 614 NTIKLWD 634
++ L+D
Sbjct: 313 KSVSLYD 319
Score = 51.6 bits (118), Expect = 7e-07
Identities = 54/229 (23%), Positives = 93/229 (40%), Gaps = 21/229 (9%)
Frame = +2
Query: 212 REKAVVTSSVPRTSNLYAP-----IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWN 376
R ++T S+ T L+ P + GH + HP G AS+ D + +++
Sbjct: 29 RPALLLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFD 88
Query: 377 VYGQCENVMVMKGHTGAIMQLCFSPDGSHL-YTGATDNTVAVWDVPTGTRIKKLK----- 538
V + V++ + + F P G+ L G + +V +WD + I L
Sbjct: 89 VDTNA-TIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLWDTASWRLISTLSIPRPD 147
Query: 539 --------GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSV 691
FV SV+ + G L S D TI ++D + + + + PV S+
Sbjct: 148 APKPSDKTSSKKFVLSVAWSPNGKRL-ACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSL 206
Query: 692 LFNDTAEKILSSGVDNV-IKMWDIRNNQIXLKIKGHTDTVTGLSLSWDG 835
+F+ ++L SG D+ + M D + + GHT V + S DG
Sbjct: 207 VFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDG 255
Score = 47.6 bits (108), Expect = 1e-05
Identities = 40/198 (20%), Positives = 81/198 (40%), Gaps = 18/198 (9%)
Frame = +2
Query: 287 HQGEIFTAKFHPEGKH----LASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPD 454
H+ ++ A + P + L + D + +W + + V GH+ + L P
Sbjct: 13 HEDSVWAATWVPATEDRPALLLTGSLDETVKLWRP-DELDLVRTNTGHSLGVAALAAHPS 71
Query: 455 GSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD 634
G + + D+ V V+DV T I L+ + V + +G L V+ ++KLWD
Sbjct: 72 GIIAASSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLWD 131
Query: 635 ARKRNPVASFDSSYP--------------VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQ 772
+++ P V SV ++ +++ +D I ++D+ ++
Sbjct: 132 TASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNGKRLACGSMDGTICVFDVDRSK 191
Query: 773 IXLKIKGHTDTVTGLSLS 826
+ +++GH V L S
Sbjct: 192 LLHQLEGHNMPVRSLVFS 209
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 63.7 bits (148), Expect = 2e-10
Identities = 39/144 (27%), Positives = 73/144 (50%), Gaps = 4/144 (2%)
Frame = +2
Query: 281 EGHQGEIFTAKFHPEGKHLASAGFDRQILIWNV--YGQCE-NVMVMKGHTGAIMQLCFSP 451
+GH+ ++ + ++ G LAS D+ IWN+ +G + + +KGHT ++ QLC+ P
Sbjct: 17 QGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDP 76
Query: 452 DGSHLY-TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKL 628
S L T + D +V +WD +G ++++ +N ++ G + V DD + +
Sbjct: 77 KHSDLVATASGDKSVRLWDARSGKCTQQVELSGENIN-ITYKPDGTHVAVGNRDDE-LTI 134
Query: 629 WDARKRNPVASFDSSYPVTSVLFN 700
D RK P+ +Y V + +N
Sbjct: 135 LDVRKFKPLHRRKFNYEVNEIAWN 158
Score = 55.2 bits (127), Expect = 6e-08
Identities = 29/122 (23%), Positives = 63/122 (51%), Gaps = 4/122 (3%)
Frame = +2
Query: 410 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV-PTG-TRIK--KLKGHANFVNSVSGAR 577
+GH + + ++ +G+ L +G+ D T +W++ P G ++ K +LKGH + V+ +
Sbjct: 17 QGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDP 76
Query: 578 RGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWD 757
+ +L+ +AS D +++LWDAR + S ++ + + D+ + + D
Sbjct: 77 KHSDLVATASGDKSVRLWDARSGKCTQQVELSGENINITYKPDGTHVAVGNRDDELTILD 136
Query: 758 IR 763
+R
Sbjct: 137 VR 138
Score = 36.3 bits (80), Expect = 0.028
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +2
Query: 680 VTSVLFNDTAEKILSSGVDNVIKMWDIR----NNQIXLKIKGHTDTVTGLSLSWD 832
V SV +N K+ S VD ++W+I + L++KGHTD+V L WD
Sbjct: 23 VHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVD--QLCWD 75
Score = 33.5 bits (73), Expect = 0.20
Identities = 25/119 (21%), Positives = 48/119 (40%)
Frame = +2
Query: 380 YGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVN 559
Y + + + HT + P G + G+ D+ V++WD+ ++ V
Sbjct: 178 YPSLKPLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVR 237
Query: 560 SVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVD 736
++S G E + SAS+D I + + + V + SV +N + +G D
Sbjct: 238 TISFNYSG-EYIASASEDLFIDIANVQTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDD 295
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/123 (20%), Positives = 54/123 (43%), Gaps = 3/123 (2%)
Frame = +2
Query: 266 PIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHT---GAIMQ 436
P+ L H + P+G++ A D + +W++ +++ ++ T +
Sbjct: 183 PLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDI----SDMLCLRTFTKLEWPVRT 238
Query: 437 LCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDN 616
+ F+ G ++ + + D + + +V TG + ++ A +NSV + LL A DD
Sbjct: 239 ISFNYSGEYIASASEDLFIDIANVQTGRTVHQIPCRA-AMNSVEWNPK-YNLLAYAGDDK 296
Query: 617 TIK 625
K
Sbjct: 297 NPK 299
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 63.7 bits (148), Expect = 2e-10
Identities = 53/202 (26%), Positives = 85/202 (42%), Gaps = 18/202 (8%)
Frame = +2
Query: 299 IFTAKFHPEGKHLASAGFDRQILIWNVYGQCEN------VMVMKGHTGAIMQLCFSP-DG 457
+ T F P G+ +A G D I+++ + ++ GH G + + P +
Sbjct: 48 VMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNED 107
Query: 458 SHLYTGATDNTVAVWDVPTGTRIKKL-----KGHANFVNSVSGARRGPELLVSASDDNTI 622
+HL T + D T +WDV TG + GH V SVS + P +S S D+T
Sbjct: 108 AHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTA 167
Query: 623 KLWDARKRN-PVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGH 796
+LWD R + V +F V +V F + + D +++DIR + H
Sbjct: 168 RLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPH 227
Query: 797 TD----TVTGLSLSWDGAYLLS 850
D VT ++ S G L +
Sbjct: 228 GDGENGPVTSIAFSVSGRLLFA 249
Score = 50.4 bits (115), Expect = 2e-06
Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 5/122 (4%)
Frame = +2
Query: 284 GHQGEIFTAKFHPEGKH-LASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGS 460
GH ++ + + S D +W+ V GH G + + F PDG
Sbjct: 140 GHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGY 199
Query: 461 HLYTGATDNTVAVWDVPTGTRIKKLKGHANF----VNSVSGARRGPELLVSASDDNTIKL 628
TG+ D T ++D+ TG +++ + H + V S++ + G L + +NT +
Sbjct: 200 RFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNNTCYV 259
Query: 629 WD 634
WD
Sbjct: 260 WD 261
Score = 50.4 bits (115), Expect = 2e-06
Identities = 37/160 (23%), Positives = 69/160 (43%), Gaps = 14/160 (8%)
Frame = +2
Query: 194 ISVVGTREKAVVTSSVPRTSNLY------APIMLLEGHQGEIFTAKFHPEGKHLASAGFD 355
+S+ G+ ++ S T+ L+ + GH+G++ T KF P+G + D
Sbjct: 148 VSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDD 207
Query: 356 RQILIWNVYGQCENVMVM---KGHTGAIMQLCFSPDGSHLYTG-ATDNTVAVWDVPTGTR 523
++++ + + G G + + FS G L+ G A++NT VWD G
Sbjct: 208 GTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEV 267
Query: 524 IKKL----KGHANFVNSVSGARRGPELLVSASDDNTIKLW 631
+ L H N ++ + + G L + D N +K+W
Sbjct: 268 VLDLGLQQDSHRNRISCLGLSADGSALCTGSWDSN-LKIW 306
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 63.7 bits (148), Expect = 2e-10
Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 10/202 (4%)
Frame = +2
Query: 284 GHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSH 463
GHQ + + ++ L + G D I+ +V + V +GHT + L +S G
Sbjct: 223 GHQSRVGSLAWN--NHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQ 280
Query: 464 LYTGATDNTVAVWDVPTGTR------IKKLKGHANFVNSVSGARRGPELLVSASD--DNT 619
L +G DN V +WD + + +L+ H + V +++ LL + D T
Sbjct: 281 LASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRT 340
Query: 620 IKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSG--VDNVIKMWDIRNNQIXLKIKG 793
IK W+ + S D+ V S+L++ ++LSS N + +W + ++ G
Sbjct: 341 IKFWNTHTGACLNSVDTGSQVCSLLWSKNERELLSSHGFTQNQLTLWKYPSMVKMAELTG 400
Query: 794 HTDTVTGLSLSWDGAYLLSING 859
HT V ++ S DG + S G
Sbjct: 401 HTSRVLYMAQSPDGCTVASAAG 422
Score = 58.4 bits (135), Expect = 6e-09
Identities = 42/186 (22%), Positives = 85/186 (45%), Gaps = 10/186 (5%)
Frame = +2
Query: 332 HLASAGFDRQILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 508
++ + D + +W+ G ++ + G + + ++PDG H+ G ++ V +WD
Sbjct: 152 NVLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDS 211
Query: 509 PTGTRIKKLK-GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASF--DSSYP 679
+ +++ LK GH + V S++ +L + D I D R R+P+ +
Sbjct: 212 ASNRQLRTLKGGHQSRVGSLAW---NNHILTTGGMDGLIINNDVRIRSPIVETYRGHTQE 268
Query: 680 VTSVLFNDTAEKILSSGVDNVIKMWD------IRNNQIXLKIKGHTDTVTGLSLSWDGAY 841
V + ++ + +++ S G DNV+ +WD Q +++ HT V L+ A
Sbjct: 269 VCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQAN 328
Query: 842 LLSING 859
LL+ G
Sbjct: 329 LLATGG 334
Score = 41.9 bits (94), Expect = 6e-04
Identities = 39/169 (23%), Positives = 69/169 (40%), Gaps = 10/169 (5%)
Frame = +2
Query: 284 GHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMV-----MKGHTGAIMQLCFS 448
GH E+ K+ G+ LAS G D + IW+ N ++ HT A+ L +
Sbjct: 264 GHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWC 323
Query: 449 PDGSHLYT---GATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVS-ASDDN 616
P ++L G D T+ W+ TG + + + V S+ ++ ELL S N
Sbjct: 324 PFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQ-VCSLLWSKNERELLSSHGFTQN 382
Query: 617 TIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDI 760
+ LW +A + V + + + S+ D ++ W++
Sbjct: 383 QLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 431
Score = 41.1 bits (92), Expect = 0.001
Identities = 26/123 (21%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFS 448
++ ++ +G + + + P+G+H+A + ++ +W+ + + GH + L +
Sbjct: 175 LVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAW- 233
Query: 449 PDGSHLYTGATDNTVAVWDVPTGTRI-KKLKGHANFVNSVSGARRGPELLVSASDDNTIK 625
+ L TG D + DV + I + +GH V + + G + L S +DN +
Sbjct: 234 -NNHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQ-LASGGNDNVVH 291
Query: 626 LWD 634
+WD
Sbjct: 292 IWD 294
Score = 31.9 bits (69), Expect = 0.60
Identities = 22/75 (29%), Positives = 31/75 (41%)
Frame = +2
Query: 161 SLLPSKRVRHEISVVGTREKAVVTSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLA 340
SLL SK R +S G + + P + L GH + P+G +A
Sbjct: 363 SLLWSKNERELLSSHGFTQNQLTLWKYPSMVKMAE----LTGHTSRVLYMAQSPDGCTVA 418
Query: 341 SAGFDRQILIWNVYG 385
SA D + WNV+G
Sbjct: 419 SAAGDETLRFWNVFG 433
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 63.7 bits (148), Expect = 2e-10
Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 10/202 (4%)
Frame = +2
Query: 284 GHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSH 463
GHQ + + ++ L + G D I+ +V + V +GHT + L +S G
Sbjct: 213 GHQSRVGSLAWN--NHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQ 270
Query: 464 LYTGATDNTVAVWDVPTGTR------IKKLKGHANFVNSVSGARRGPELLVSASD--DNT 619
L +G DN V +WD + + +L+ H + V +++ LL + D T
Sbjct: 271 LASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRT 330
Query: 620 IKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSG--VDNVIKMWDIRNNQIXLKIKG 793
IK W+ + S D+ V S+L++ ++LSS N + +W + ++ G
Sbjct: 331 IKFWNTHTGACLNSVDTGSQVCSLLWSKNERELLSSHGFTQNQLTLWKYPSMVKMAELTG 390
Query: 794 HTDTVTGLSLSWDGAYLLSING 859
HT V ++ S DG + S G
Sbjct: 391 HTSRVLYMAQSPDGCTVASAAG 412
Score = 58.4 bits (135), Expect = 6e-09
Identities = 42/186 (22%), Positives = 85/186 (45%), Gaps = 10/186 (5%)
Frame = +2
Query: 332 HLASAGFDRQILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 508
++ + D + +W+ G ++ + G + + ++PDG H+ G ++ V +WD
Sbjct: 142 NVLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDS 201
Query: 509 PTGTRIKKLK-GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASF--DSSYP 679
+ +++ LK GH + V S++ +L + D I D R R+P+ +
Sbjct: 202 ASNRQLRTLKGGHQSRVGSLAW---NNHILTTGGMDGLIINNDVRIRSPIVETYRGHTQE 258
Query: 680 VTSVLFNDTAEKILSSGVDNVIKMWD------IRNNQIXLKIKGHTDTVTGLSLSWDGAY 841
V + ++ + +++ S G DNV+ +WD Q +++ HT V L+ A
Sbjct: 259 VCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQAN 318
Query: 842 LLSING 859
LL+ G
Sbjct: 319 LLATGG 324
Score = 41.9 bits (94), Expect = 6e-04
Identities = 39/169 (23%), Positives = 69/169 (40%), Gaps = 10/169 (5%)
Frame = +2
Query: 284 GHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMV-----MKGHTGAIMQLCFS 448
GH E+ K+ G+ LAS G D + IW+ N ++ HT A+ L +
Sbjct: 254 GHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWC 313
Query: 449 PDGSHLYT---GATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVS-ASDDN 616
P ++L G D T+ W+ TG + + + V S+ ++ ELL S N
Sbjct: 314 PFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQ-VCSLLWSKNERELLSSHGFTQN 372
Query: 617 TIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDI 760
+ LW +A + V + + + S+ D ++ W++
Sbjct: 373 QLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 421
Score = 41.1 bits (92), Expect = 0.001
Identities = 26/123 (21%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFS 448
++ ++ +G + + + P+G+H+A + ++ +W+ + + GH + L +
Sbjct: 165 LVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAW- 223
Query: 449 PDGSHLYTGATDNTVAVWDVPTGTRI-KKLKGHANFVNSVSGARRGPELLVSASDDNTIK 625
+ L TG D + DV + I + +GH V + + G + L S +DN +
Sbjct: 224 -NNHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQ-LASGGNDNVVH 281
Query: 626 LWD 634
+WD
Sbjct: 282 IWD 284
Score = 31.9 bits (69), Expect = 0.60
Identities = 22/75 (29%), Positives = 31/75 (41%)
Frame = +2
Query: 161 SLLPSKRVRHEISVVGTREKAVVTSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLA 340
SLL SK R +S G + + P + L GH + P+G +A
Sbjct: 353 SLLWSKNERELLSSHGFTQNQLTLWKYPSMVKMAE----LTGHTSRVLYMAQSPDGCTVA 408
Query: 341 SAGFDRQILIWNVYG 385
SA D + WNV+G
Sbjct: 409 SAAGDETLRFWNVFG 423
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 63.7 bits (148), Expect = 2e-10
Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 5/122 (4%)
Frame = +2
Query: 413 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 592
G++ I + FS DG + G++D+++ V+D+ + H + VN+V A L
Sbjct: 227 GYSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNL 286
Query: 593 LVSASDDNTIKLWDAR----KRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIKMWD 757
++S SDDN K+WD R + P VT + +S+G D IK+WD
Sbjct: 287 ILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWD 346
Query: 758 IR 763
IR
Sbjct: 347 IR 348
Score = 55.2 bits (127), Expect = 6e-08
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 9/134 (6%)
Frame = +2
Query: 284 GHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPD-GS 460
G+ IF+ KF +G+ + + D I ++++ ++ + HT + +CF+ + G+
Sbjct: 227 GYSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTV-AHTSDVNTVCFADESGN 285
Query: 461 HLYTGATDNTVAVWD--------VPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDN 616
+ +G+ DN VWD P G + L+G F++S R +S D
Sbjct: 286 LILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEG-VTFIDSRGDGR----YFISNGKDQ 340
Query: 617 TIKLWDARKRNPVA 658
TIKLWD RK + A
Sbjct: 341 TIKLWDIRKMSSSA 354
>At2g47790.1 68415.m05965 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; The first 3 exons are
identical to that of GB:AJ224957. This gene appears to
be a truncated version of that in GB:AJ224957; contains
4 WD-40 repeats (PF00400)
Length = 392
Score = 63.3 bits (147), Expect = 2e-10
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 6/134 (4%)
Frame = +2
Query: 428 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV---SGARRGPELLV 598
+ Q+ D + + + NTV ++ TG + KGH++ VN + S + P +L
Sbjct: 44 VFQIVPKIDWTAIAVSLSTNTVKLYSPVTGQYYGECKGHSDTVNQIAFSSDSAASPHVLH 103
Query: 599 SASDDNTIKLWDARKRNPVASFD--SSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNN- 769
S S D TI+ WD R V+ D + + S + A+ +L+ G + +WD RN+
Sbjct: 104 SCSSDGTIRSWDTRSFQQVSRIDTGNDQEIFSFSYGGAADNLLAGGCKEQVLLWDWRNSK 163
Query: 770 QIXLKIKGHTDTVT 811
Q+ + H D VT
Sbjct: 164 QVACLEESHMDDVT 177
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/75 (20%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 284 GHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPD-GS 460
G+ EIF+ + +L + G Q+L+W+ + + + H + Q+ F P+ +
Sbjct: 128 GNDQEIFSFSYGGAADNLLAGGCKEQVLLWDWRNSKQVACLEESHMDDVTQVHFVPNKPN 187
Query: 461 HLYTGATDNTVAVWD 505
L + + D + +++
Sbjct: 188 KLLSASVDGLICLFN 202
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 62.5 bits (145), Expect = 4e-10
Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 19/185 (10%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDG 457
++ H+G ++T KF + +LAS G DR I +W V +CE + + +G I G
Sbjct: 400 IQAHEGAVWTIKFSQDAHYLASGGADRVIHVWEVQ-ECELMSMNEGSLTPIHPSLCDSSG 458
Query: 458 SHL-----------YTGATDNTVAVW-DVP------TGTRIKKLKGHANFVNSVSGARRG 583
+ + +G N + + VP + + LKGH + + +S ++
Sbjct: 459 NEITVVEKKKKGKGSSGRRHNHIPDYVHVPETVFSFSDKPVCSLKGHLDAILDLSWSK-- 516
Query: 584 PELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEK-ILSSGVDNVIKMWDI 760
+LL+S+S D T++LWD + + F + VT + F+ E LS +D I++W I
Sbjct: 517 SQLLLSSSMDKTVRLWDIETKTCLKLFAHNDYVTCIQFSPVDENYFLSGSLDAKIRIWSI 576
Query: 761 RNNQI 775
++ +
Sbjct: 577 QDRHV 581
Score = 41.9 bits (94), Expect = 6e-04
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 19/167 (11%)
Frame = +2
Query: 407 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 586
++ H GA+ + FS D +L +G D + VW+V + +G ++ G
Sbjct: 400 IQAHEGAVWTIKFSQDAHYLASGGADRVIHVWEVQECELMSMNEGSLTPIHPSLCDSSGN 459
Query: 587 ELLVSASDDNTIKLWDARKRNPVASFD---------SSYPVTSV---------LFNDTAE 712
E+ V K R+ N + + S PV S+ L ++
Sbjct: 460 EITVVEKKKKG-KGSSGRRHNHIPDYVHVPETVFSFSDKPVCSLKGHLDAILDLSWSKSQ 518
Query: 713 KILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLS-WDGAYLLS 850
+LSS +D +++WDI + LK+ H D VT + S D Y LS
Sbjct: 519 LLLSSSMDKTVRLWDI-ETKTCLKLFAHNDYVTCIQFSPVDENYFLS 564
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 62.1 bits (144), Expect = 5e-10
Identities = 41/154 (26%), Positives = 69/154 (44%)
Frame = +2
Query: 287 HQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHL 466
H+G + FH S G D +I +WN Y + + GH I + F + +
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWN-YKTHRCLFTLLGHLDYIRTVQFHHENPWI 108
Query: 467 YTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKR 646
+ + D T+ +W+ + T I L GH ++V S + +L+VSAS D T+++WD
Sbjct: 109 VSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDI--- 164
Query: 647 NPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIK 748
S+ P ++ L GVD ++K
Sbjct: 165 -GALKKKSASPADDLMRFSQMNSDLFGGVDAIVK 197
Score = 61.7 bits (143), Expect = 7e-10
Identities = 47/203 (23%), Positives = 91/203 (44%), Gaps = 28/203 (13%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNV----------------------- 379
I +L GH + A FHP+ + SA D+ + +W++
Sbjct: 128 ISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALKKKSASPADDLMRFSQMNSD 187
Query: 380 -YGQCENVM--VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV--PTGTRIKKLKGH 544
+G + ++ V++GH + F P + +GA D V +W + + L+GH
Sbjct: 188 LFGGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGH 247
Query: 545 ANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILS 724
N V+SV + +++VS S+D +I++WDA KR + +F + +L +L+
Sbjct: 248 MNNVSSVMFHAK-QDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVHPEINLLA 306
Query: 725 SGVDNVIKMWDIRNNQIXLKIKG 793
+G DN + ++ + + + G
Sbjct: 307 AGHDNGMIVFKLERERPAFALSG 329
Score = 54.0 bits (124), Expect = 1e-07
Identities = 53/192 (27%), Positives = 84/192 (43%), Gaps = 29/192 (15%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFS 448
+ L GH I T +FH E + SA D+ I IWN + + V+ GH +M F
Sbjct: 86 LFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWN-WQSRTCISVLTGHNHYVMCASFH 144
Query: 449 PDGSHLYTGATDNTVAVWDV---------PTGTRIKKLKGHANFVNSV--------SGAR 577
P + + + D TV VWD+ P ++ + +++ V G
Sbjct: 145 PKEDLVVSASLDQTVRVWDIGALKKKSASPADDLMRFSQMNSDLFGGVDAIVKYVLEGHD 204
Query: 578 RG-------PEL--LVSASDDNTIKLW--DARKRNPVASFDSSY-PVTSVLFNDTAEKIL 721
RG P L +VS +DD +KLW + K V + V+SV+F+ + I+
Sbjct: 205 RGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIV 264
Query: 722 SSGVDNVIKMWD 757
S+ D I++WD
Sbjct: 265 SNSEDKSIRVWD 276
Score = 46.4 bits (105), Expect = 3e-05
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Frame = +2
Query: 524 IKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY-PVTSVLFN 700
+ K + +N V +S + P +L S I+LWD R + FD PV V F+
Sbjct: 2 LTKFETKSNRVKGLSFHPKRPWILASLHS-GVIQLWDYRMGTLIDRFDEHEGPVRGVHFH 60
Query: 701 DTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
++ +S G D IK+W+ + ++ + GH D + + + +++S
Sbjct: 61 NSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVS 110
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/125 (24%), Positives = 50/125 (40%), Gaps = 1/125 (0%)
Frame = +2
Query: 437 LCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDN 616
L F P + + +WD GT I + H V V P L VS DD
Sbjct: 15 LSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQP-LFVSGGDDY 73
Query: 617 TIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKG 793
IK+W+ + + + + +V F+ I+S+ D I++W+ ++ + G
Sbjct: 74 KIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTG 133
Query: 794 HTDTV 808
H V
Sbjct: 134 HNHYV 138
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 61.7 bits (143), Expect = 7e-10
Identities = 57/198 (28%), Positives = 88/198 (44%), Gaps = 7/198 (3%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKH-LASAGFDRQILIWN-VYGQCENVMVMKGHTGAIMQLCFSP 451
L+GHQ ++ T P G L +A D + IW+ GQC V+ + G G C
Sbjct: 140 LDGHQ-KVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLNLGGEVG-----CIIS 193
Query: 452 DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLW 631
+G L G N V W++ + L G V S+ G +LL + + D +I +W
Sbjct: 194 EGPWLLVGMP-NLVKAWNIQNNADLS-LNGPVGQVYSLVV---GTDLLFAGTQDGSILVW 248
Query: 632 DARKRNPVASFDSS-----YPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGH 796
R + + FD + + + V A ++ S +DN IK+W + N Q + H
Sbjct: 249 --RYNSTTSCFDPAASLLGHTLAVVSLYVGANRLYSGAMDNSIKVWSLDNLQCIQTLTEH 306
Query: 797 TDTVTGLSLSWDGAYLLS 850
T V L + WD +LLS
Sbjct: 307 TSVVMSL-ICWD-QFLLS 322
Score = 50.4 bits (115), Expect = 2e-06
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGF-DRQILIW--NVYGQC-ENVMVMKGHTGAIMQLCF 445
L G G++++ G L AG D IL+W N C + + GHT A++ L
Sbjct: 219 LNGPVGQVYSLVV---GTDLLFAGTQDGSILVWRYNSTTSCFDPAASLLGHTLAVVSLYV 275
Query: 446 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 625
+ LY+GA DN++ VW + I+ L H + V S+ + L+S S DNT+K
Sbjct: 276 G--ANRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSLIC---WDQFLLSCSLDNTVK 330
Query: 626 LWDA 637
+W A
Sbjct: 331 IWAA 334
Score = 40.7 bits (91), Expect = 0.001
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 6/142 (4%)
Frame = +2
Query: 347 GFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRI 526
G + WN+ + + + G G + L D L+ G D ++ VW + T
Sbjct: 201 GMPNLVKAWNIQNNAD--LSLNGPVGQVYSLVVGTD--LLFAGTQDGSILVWRYNSTTSC 256
Query: 527 ----KKLKGHANFVNSVS-GARRGPELLVSASDDNTIKLWDARKRNPVASF-DSSYPVTS 688
L GH V S+ GA R L S + DN+IK+W + + + + V S
Sbjct: 257 FDPAASLLGHTLAVVSLYVGANR----LYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMS 312
Query: 689 VLFNDTAEKILSSGVDNVIKMW 754
++ D + +LS +DN +K+W
Sbjct: 313 LICWD--QFLLSCSLDNTVKIW 332
Score = 38.3 bits (85), Expect = 0.007
Identities = 40/169 (23%), Positives = 62/169 (36%), Gaps = 7/169 (4%)
Frame = +2
Query: 356 RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG--TRIK 529
R + W+ + + GH + + LYT + D TV +WD +G T +
Sbjct: 123 RYLHCWSKGDSFSLLTQLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVL 182
Query: 530 KLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTA 709
L G + S GP LLV N +K W+ + A + PV V
Sbjct: 183 NLGGEVGCIIS-----EGPWLLVGM--PNLVKAWNIQNN---ADLSLNGPVGQVYSLVVG 232
Query: 710 EKILSSGV-DNVIKMWDIRNNQIXL----KIKGHTDTVTGLSLSWDGAY 841
+L +G D I +W + + GHT V L + + Y
Sbjct: 233 TDLLFAGTQDGSILVWRYNSTTSCFDPAASLLGHTLAVVSLYVGANRLY 281
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 61.7 bits (143), Expect = 7e-10
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 2/156 (1%)
Frame = +2
Query: 287 HQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHL 466
H+G + FH S G D +I +WN Y + + GH I + F + +
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWN-YKNHRCLFTLLGHLDYIRTVQFHHEYPWI 108
Query: 467 YTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD--AR 640
+ + D T+ +W+ + T + L GH ++V S + +L+VSAS D T+++WD A
Sbjct: 109 VSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDIGAL 167
Query: 641 KRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIK 748
++ V+ D +T + L GVD ++K
Sbjct: 168 RKKTVSPADDIMRLTQM------NSDLFGGVDAIVK 197
Score = 59.3 bits (137), Expect = 3e-09
Identities = 45/203 (22%), Positives = 91/203 (44%), Gaps = 28/203 (13%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNV----------------------- 379
+ +L GH + A FHP+ + SA D+ + +W++
Sbjct: 128 VSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDIMRLTQMNSD 187
Query: 380 -YGQCENVM--VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV--PTGTRIKKLKGH 544
+G + ++ V++GH + F P + +GA D V +W + + L+GH
Sbjct: 188 LFGGVDAIVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGH 247
Query: 545 ANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILS 724
N V+SV + +++VS S+D +I++WDA KR + +F + +L +L+
Sbjct: 248 MNNVSSVMFHAK-QDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVHPEMNLLA 306
Query: 725 SGVDNVIKMWDIRNNQIXLKIKG 793
+G D+ + ++ + + + G
Sbjct: 307 AGHDSGMIVFKLERERPAFALSG 329
Score = 54.0 bits (124), Expect = 1e-07
Identities = 53/192 (27%), Positives = 83/192 (43%), Gaps = 29/192 (15%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFS 448
+ L GH I T +FH E + SA D+ I IWN + V V+ GH +M F
Sbjct: 86 LFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT-CVSVLTGHNHYVMCASFH 144
Query: 449 PDGSHLYTGATDNTVAVWDV---------PTGTRIKKLKGHANFVNSV--------SGAR 577
P + + + D TV VWD+ P ++ + +++ V G
Sbjct: 145 PKEDLVVSASLDQTVRVWDIGALRKKTVSPADDIMRLTQMNSDLFGGVDAIVKYVLEGHD 204
Query: 578 RGPE---------LLVSASDDNTIKLW--DARKRNPVASFDSSY-PVTSVLFNDTAEKIL 721
RG L+VS +DD +KLW + K V + V+SV+F+ + I+
Sbjct: 205 RGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIV 264
Query: 722 SSGVDNVIKMWD 757
S+ D I++WD
Sbjct: 265 SNSEDKSIRVWD 276
Score = 47.6 bits (108), Expect = 1e-05
Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Frame = +2
Query: 524 IKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY-PVTSVLFN 700
+ K + +N V +S + P +L S I+LWD R + FD PV V F+
Sbjct: 2 LTKFETKSNRVKGLSFHPKRPWILASLHS-GVIQLWDYRMGTLIDRFDEHEGPVRGVHFH 60
Query: 701 DTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
++ +S G D IK+W+ +N++ + GH D + + + +++S
Sbjct: 61 NSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVS 110
Score = 43.6 bits (98), Expect = 2e-04
Identities = 30/125 (24%), Positives = 50/125 (40%), Gaps = 1/125 (0%)
Frame = +2
Query: 437 LCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDN 616
L F P + + +WD GT I + H V V P L VS DD
Sbjct: 15 LSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQP-LFVSGGDDY 73
Query: 617 TIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKG 793
IK+W+ + + + + +V F+ I+S+ D I++W+ ++ + G
Sbjct: 74 KIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTG 133
Query: 794 HTDTV 808
H V
Sbjct: 134 HNHYV 138
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 61.3 bits (142), Expect = 9e-10
Identities = 52/220 (23%), Positives = 98/220 (44%), Gaps = 4/220 (1%)
Frame = +2
Query: 203 VGTREKAVVTSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVY 382
+GT V V R N I +EGH+ + + L+S D+ IL ++
Sbjct: 226 IGTSSGTVQIWDVLRCKN----IRTMEGHRLRVGALAW--SSSVLSSGSRDKSILQRDIR 279
Query: 383 GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNS 562
Q ++V +KGH I L +S D L +G DN + VW+ + + + HA V +
Sbjct: 280 TQEDHVSKLKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKA 339
Query: 563 VSGARRGPELLVS--ASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSG-- 730
++ + LL S + D I+ W+ + D++ V +++++ +++S+
Sbjct: 340 IAWSPHHFGLLASGGGTADRCIRFWNTTTNTHLNCVDTNSQVCNLVWSKNVNELVSTHGY 399
Query: 731 VDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
N I +W + GH+ V L++S DG +++
Sbjct: 400 SQNQIIVWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVT 439
Score = 50.0 bits (114), Expect = 2e-06
Identities = 39/181 (21%), Positives = 78/181 (43%), Gaps = 2/181 (1%)
Frame = +2
Query: 329 KHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 508
+++ + G + +WN + G + + ++ G+HL G + TV +WDV
Sbjct: 179 QNVLAVGLGNCVYLWNACSSKVTKLCDLGVDETVCSVGWALRGTHLAIGTSSGTVQIWDV 238
Query: 509 PTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY--PV 682
I+ ++GH V +++ + +L S S D +I D R + S + +
Sbjct: 239 LRCKNIRTMEGHRLRVGALAWS---SSVLSSGSRDKSILQRDIRTQEDHVSKLKGHKSEI 295
Query: 683 TSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLSINGY 862
+ ++ ++ S G DN + +W+ + Q L+ H V ++ S LL+ G
Sbjct: 296 CGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHHFGLLASGGG 355
Query: 863 T 865
T
Sbjct: 356 T 356
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 359 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 508
QI++W Y + + GH+ ++ L SPDG + TGA D T+ W+V
Sbjct: 403 QIIVWK-YPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNV 451
Score = 35.9 bits (79), Expect = 0.037
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Frame = +2
Query: 335 LASAG--FDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYT--GATDNTVAVW 502
LAS G DR I WN V + L +S + + L + G + N + VW
Sbjct: 350 LASGGGTADRCIRFWNTTTNTHLNCV--DTNSQVCNLVWSKNVNELVSTHGYSQNQIIVW 407
Query: 503 DVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD 634
PT +++ L GH+ V ++ + G + +V+ + D T++ W+
Sbjct: 408 KYPTMSKLATLTGHSYRVLYLAVSPDG-QTIVTGAGDETLRFWN 450
Score = 32.3 bits (70), Expect = 0.46
Identities = 18/74 (24%), Positives = 31/74 (41%)
Frame = +2
Query: 161 SLLPSKRVRHEISVVGTREKAVVTSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLA 340
+L+ SK V +S G + ++ P S L L GH + P+G+ +
Sbjct: 383 NLVWSKNVNELVSTHGYSQNQIIVWKYPTMSKLAT----LTGHSYRVLYLAVSPDGQTIV 438
Query: 341 SAGFDRQILIWNVY 382
+ D + WNV+
Sbjct: 439 TGAGDETLRFWNVF 452
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 60.9 bits (141), Expect = 1e-09
Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 4/195 (2%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDG 457
++ HQG I+T KF P+ LASAG D I +W V +CE +M + G++ + P
Sbjct: 407 IQAHQGGIWTMKFSPDSHLLASAGEDCAIHVWEVQ-ECE---IMSMNEGSLTPI--HPSM 460
Query: 458 SHLYTGATDNTVAVWDVPTGTRIKKLKGHANFV---NSVSGARRGPELLVSASDDNTIKL 628
S G+TD + + D ++ KK KG + N + PE + S SD
Sbjct: 461 S----GSTDKS-SEGDAAEVSQDKKKKGKTSMSKKGNQIPDYVHAPETVFSLSD------ 509
Query: 629 WDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTV 808
P+ SF L ++ +LSS +D +++WDI Q LK+ H D V
Sbjct: 510 ------KPICSFTGHLDDVLDLSWSRSQLLLSSSMDKTVRLWDI-ETQSCLKLFAHNDYV 562
Query: 809 TGLSLS-WDGAYLLS 850
T + + D Y +S
Sbjct: 563 TCVQFNPLDEDYFIS 577
Score = 35.1 bits (77), Expect = 0.065
Identities = 41/215 (19%), Positives = 91/215 (42%), Gaps = 14/215 (6%)
Frame = +2
Query: 209 TREKAVVTSSVPRTSNLY----APIMLLEGHQGEIFTAKFHP-EGKHLASAGFDRQILIW 373
+R + +++SS+ +T L+ + L H + +F+P + + S D +I IW
Sbjct: 528 SRSQLLLSSSMDKTVRLWDIETQSCLKLFAHNDYVTCVQFNPLDEDYFISGSLDAKIRIW 587
Query: 374 NVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD-----VPTGTRI---K 529
N+ + V+ + +C++PDG + G+ + ++ + +I
Sbjct: 588 NISNR--QVVEWNDLKEMVTAVCYTPDGQAAFVGSINGHCRLYSAEDCKLEQTNQIDLQN 645
Query: 530 KLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKR-NPVASFDSSYPVTSVLFNDT 706
K K A + + + P ++ S D+ I++ D + F + + +
Sbjct: 646 KKKAQAKKITAFQFSPINPSEVLVTSADSRIRVLDGTELVQKFRGFKNMNSQMTASYTVD 705
Query: 707 AEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVT 811
A+ I+ + D+ + +W ++ + L I G TVT
Sbjct: 706 AKHIVCASEDSQVYVW--KHEEPRLGITGR-KTVT 737
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 60.9 bits (141), Expect = 1e-09
Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 6/181 (3%)
Frame = +2
Query: 326 GKHLASAGFDRQILIWNV-YGQCENVMVMKGHTG----AIMQLCFSPDGSHLYTGATDNT 490
GK++ + ++ + IW+V G C + G A+ + S S + G D +
Sbjct: 30 GKYVLAPALEK-VGIWHVRQGVCSKTLTPSSSRGGPSLAVTSIASSAS-SLVAVGYADGS 87
Query: 491 VAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDS 670
+ +WD GT H V ++ + G +L S S DN I LWD + +
Sbjct: 88 IRIWDTEKGTCEVNFNSHKGAVTALRYNKVG-SMLASGSKDNDIILWDVVGESGLFRLRG 146
Query: 671 SYP-VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLL 847
VT ++F D +K++SS D +++WD+ + GH V + + Y++
Sbjct: 147 HRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERYVV 206
Query: 848 S 850
+
Sbjct: 207 T 207
Score = 57.6 bits (133), Expect = 1e-08
Identities = 37/146 (25%), Positives = 73/146 (50%), Gaps = 3/146 (2%)
Frame = +2
Query: 335 LASAGF-DRQILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 508
L + G+ D I IW+ G CE + H GA+ L ++ GS L +G+ DN + +WDV
Sbjct: 78 LVAVGYADGSIRIWDTEKGTCE--VNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDV 135
Query: 509 PTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTS 688
+ + +L+GH + V + G + LVS+S D +++WD ++ + +
Sbjct: 136 VGESGLFRLRGHRDQVTDLVFLDGGKK-LVSSSKDKFLRVWDLETQHCMQIVSGHHSEVW 194
Query: 689 VLFNDTAEK-ILSSGVDNVIKMWDIR 763
+ D E+ +++ D ++ + ++
Sbjct: 195 SVDTDPEERYVVTGSADQELRFYAVK 220
Score = 56.8 bits (131), Expect = 2e-08
Identities = 33/155 (21%), Positives = 68/155 (43%), Gaps = 1/155 (0%)
Frame = +2
Query: 296 EIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTG 475
++ P+ KH+A A D + ++ + + + + GH +M + S DG + TG
Sbjct: 542 DVLAVAISPDAKHIAVALLDSTVKVFYM-DSLKFYLSLYGHKLPVMCIDISSDGELIVTG 600
Query: 476 ATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPV 655
+ D + +W + G K + H + V V R L S D +K WDA K +
Sbjct: 601 SQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFV-RNTHYLFSIGKDRLVKYWDADKFEHL 659
Query: 656 ASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWD 757
+ + + + + ++ + +++ D ++ WD
Sbjct: 660 LTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWD 694
Score = 55.2 bits (127), Expect = 6e-08
Identities = 30/119 (25%), Positives = 58/119 (48%)
Frame = +2
Query: 287 HQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHL 466
H+G + +++ G LAS D I++W+V G+ + ++GH + L F G L
Sbjct: 105 HKGAVTALRYNKVGSMLASGSKDNDIILWDVVGE-SGLFRLRGHRDQVTDLVFLDGGKKL 163
Query: 467 YTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK 643
+ + D + VWD+ T ++ + GH + V SV +V+ S D ++ + ++
Sbjct: 164 VSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVD-TDPEERYVVTGSADQELRFYAVKE 221
Score = 55.2 bits (127), Expect = 6e-08
Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 1/153 (0%)
Frame = +2
Query: 395 NVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 574
NV MK + ++ + SPD H+ D+TV V+ + + L GH V + +
Sbjct: 533 NVKSMKMNDD-VLAVAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDIS 591
Query: 575 RRGPELLVSASDDNTIKLWDARKRNPVAS-FDSSYPVTSVLFNDTAEKILSSGVDNVIKM 751
G EL+V+ S D +K+W + S F V V F + S G D ++K
Sbjct: 592 SDG-ELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKY 650
Query: 752 WDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
WD + L ++GH + L++S G +L++
Sbjct: 651 WDADKFEHLLTLEGHHAEIWCLAISNRGDFLVT 683
Score = 50.4 bits (115), Expect = 2e-06
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 5/143 (3%)
Frame = +2
Query: 437 LCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHAN----FVNSVSGARRGPELLVSA 604
+ + G ++ A + V +W V G K L ++ + S A L+
Sbjct: 24 IAYDSTGKYVLAPALEK-VGIWHVRQGVCSKTLTPSSSRGGPSLAVTSIASSASSLVAVG 82
Query: 605 SDDNTIKLWDARKRNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXL 781
D +I++WD K +F+S VT++ +N + S DN I +WD+
Sbjct: 83 YADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLF 142
Query: 782 KIKGHTDTVTGLSLSWDGAYLLS 850
+++GH D VT L G L+S
Sbjct: 143 RLRGHRDQVTDLVFLDGGKKLVS 165
Score = 39.9 bits (89), Expect = 0.002
Identities = 41/175 (23%), Positives = 67/175 (38%), Gaps = 12/175 (6%)
Frame = +2
Query: 383 GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNS 562
G V +K H G I + P+ S T + D+ V W+ + K N
Sbjct: 475 GSATKVEEVKAHGGTIWSITPIPNDSGFVTVSADHEVKFWEYQVKQKSGKATKKLTVSNV 534
Query: 563 VSGARRGPELLVSASDD----------NTIKLW--DARKRNPVASFDSSYPVTSVLFNDT 706
S L V+ S D +T+K++ D+ K ++ + PV + +
Sbjct: 535 KSMKMNDDVLAVAISPDAKHIAVALLDSTVKVFYMDSLKFY-LSLYGHKLPVMCIDISSD 593
Query: 707 AEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLSINGYTLV 871
E I++ D +K+W + I H D+V G+ + YL SI LV
Sbjct: 594 GELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLV 648
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/101 (21%), Positives = 48/101 (47%)
Frame = +2
Query: 206 GTREKAVVTSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYG 385
G+++ ++ V S L+ L GH+ ++ F GK L S+ D+ + +W++
Sbjct: 124 GSKDNDIILWDVVGESGLFR----LRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLET 179
Query: 386 QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 508
Q + ++ GH + + P+ ++ TG+ D + + V
Sbjct: 180 Q-HCMQIVSGHHSEVWSVDTDPEERYVVTGSADQELRFYAV 219
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 60.5 bits (140), Expect = 2e-09
Identities = 40/175 (22%), Positives = 71/175 (40%), Gaps = 3/175 (1%)
Frame = +2
Query: 335 LASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLY-TGATDNTVAVWDVP 511
L S D + W+ ++ H+ + L + +++ +G V +WD+
Sbjct: 98 LVSCSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDIE 157
Query: 512 TGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRN--PVASFDSSYPVT 685
AN +S +GA L + N I + + P + V
Sbjct: 158 AALSPVTKPNDANEDSSSNGANGPVTSLRTVGSSNNISVQSSPSHGYTPTIAKGHKESVY 217
Query: 686 SVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
++ NDT ++S G + V+++WD R +K++GHTD V L L G + LS
Sbjct: 218 ALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLS 272
Score = 58.8 bits (136), Expect = 5e-09
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Frame = +2
Query: 404 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 583
+ KGH ++ L + G+ L +G T+ + VWD TG++ KL+GH + V + G
Sbjct: 208 IAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTG 267
Query: 584 PELLVSASDDNTIKLWDARKRNPVASFD-SSYPVTSVLFNDTAEKILSSGVDNVIKMWDI 760
+S S D+ I+LWD ++ + ++ + V ++ N + + S G D + + D+
Sbjct: 268 -RFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDL 326
Query: 761 RNNQ-IXLKIKGH 796
+ + L K H
Sbjct: 327 ATRESVLLCTKEH 339
Score = 51.2 bits (117), Expect = 9e-07
Identities = 45/203 (22%), Positives = 87/203 (42%), Gaps = 2/203 (0%)
Frame = +2
Query: 152 EDASLLPSKRVRHEISVVGTREKAVVTSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGK 331
ED+S + + VG+ V SS S+ Y P + +GH+ ++ + G
Sbjct: 171 EDSSSNGANGPVTSLRTVGSSNNISVQSS---PSHGYTPT-IAKGHKESVYALAMNDTGT 226
Query: 332 HLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVP 511
L S G ++ + +W+ ++ M ++GHT + L G +G++D+ + +WD+
Sbjct: 227 MLVSGGTEKVLRVWDPRTGSKS-MKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDL- 284
Query: 512 TGTRIKKLKGHANFVNSVSGARRGPEL--LVSASDDNTIKLWDARKRNPVASFDSSYPVT 685
G + + L +A +SV P + S D + L D R V +P+
Sbjct: 285 -GQQ-RCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDLATRESVLLCTKEHPIQ 342
Query: 686 SVLFNDTAEKILSSGVDNVIKMW 754
+ D + I + D+ ++ W
Sbjct: 343 QLALQDNS--IWVATTDSSVERW 363
Score = 45.2 bits (102), Expect = 6e-05
Identities = 37/164 (22%), Positives = 67/164 (40%), Gaps = 2/164 (1%)
Frame = +2
Query: 335 LASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 514
+AS G ++ IW++ V + + L T + N ++V P+
Sbjct: 142 VASGGLGGEVFIWDIEAALSPVTKPNDANEDSSSNGANGPVTSLRTVGSSNNISVQSSPS 201
Query: 515 -GTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSV 691
G KGH V +++ G +LVS + +++WD R + V
Sbjct: 202 HGYTPTIAKGHKESVYALAMNDTGT-MLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRV 260
Query: 692 LFNDTAEKI-LSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLS 820
L D+ + LS D++I++WD+ + HTD+V L+
Sbjct: 261 LLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALA 304
Score = 43.6 bits (98), Expect = 2e-04
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 5/116 (4%)
Frame = +2
Query: 428 IMQLCFSPDGSHLYTGATDNTVAVW--DVPTGTRIKKLKGHANFVNSVSGARRGPELLVS 601
+++ S D S+L+TG+ D T+ W D + H ++VN + A G LVS
Sbjct: 43 VLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALA--GESTLVS 100
Query: 602 ASDDNTIKLWDARKRNPVASF---DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDI 760
S D T+K WD S Y + + S G+ + +WDI
Sbjct: 101 CSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDI 156
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 60.5 bits (140), Expect = 2e-09
Identities = 40/175 (22%), Positives = 71/175 (40%), Gaps = 3/175 (1%)
Frame = +2
Query: 335 LASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLY-TGATDNTVAVWDVP 511
L S D + W+ ++ H+ + L + +++ +G V +WD+
Sbjct: 98 LVSCSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDIE 157
Query: 512 TGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRN--PVASFDSSYPVT 685
AN +S +GA L + N I + + P + V
Sbjct: 158 AALSPVTKPNDANEDSSSNGANGPVTSLRTVGSSNNISVQSSPSHGYTPTIAKGHKESVY 217
Query: 686 SVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
++ NDT ++S G + V+++WD R +K++GHTD V L L G + LS
Sbjct: 218 ALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLS 272
Score = 58.8 bits (136), Expect = 5e-09
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Frame = +2
Query: 404 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 583
+ KGH ++ L + G+ L +G T+ + VWD TG++ KL+GH + V + G
Sbjct: 208 IAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTG 267
Query: 584 PELLVSASDDNTIKLWDARKRNPVASFD-SSYPVTSVLFNDTAEKILSSGVDNVIKMWDI 760
+S S D+ I+LWD ++ + ++ + V ++ N + + S G D + + D+
Sbjct: 268 -RFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDL 326
Query: 761 RNNQ-IXLKIKGH 796
+ + L K H
Sbjct: 327 ATRESVLLCTKEH 339
Score = 51.2 bits (117), Expect = 9e-07
Identities = 45/203 (22%), Positives = 87/203 (42%), Gaps = 2/203 (0%)
Frame = +2
Query: 152 EDASLLPSKRVRHEISVVGTREKAVVTSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGK 331
ED+S + + VG+ V SS S+ Y P + +GH+ ++ + G
Sbjct: 171 EDSSSNGANGPVTSLRTVGSSNNISVQSS---PSHGYTPT-IAKGHKESVYALAMNDTGT 226
Query: 332 HLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVP 511
L S G ++ + +W+ ++ M ++GHT + L G +G++D+ + +WD+
Sbjct: 227 MLVSGGTEKVLRVWDPRTGSKS-MKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDL- 284
Query: 512 TGTRIKKLKGHANFVNSVSGARRGPEL--LVSASDDNTIKLWDARKRNPVASFDSSYPVT 685
G + + L +A +SV P + S D + L D R V +P+
Sbjct: 285 -GQQ-RCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDLATRESVLLCTKEHPIQ 342
Query: 686 SVLFNDTAEKILSSGVDNVIKMW 754
+ D + I + D+ ++ W
Sbjct: 343 QLALQDNS--IWVATTDSSVERW 363
Score = 45.2 bits (102), Expect = 6e-05
Identities = 37/164 (22%), Positives = 67/164 (40%), Gaps = 2/164 (1%)
Frame = +2
Query: 335 LASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 514
+AS G ++ IW++ V + + L T + N ++V P+
Sbjct: 142 VASGGLGGEVFIWDIEAALSPVTKPNDANEDSSSNGANGPVTSLRTVGSSNNISVQSSPS 201
Query: 515 -GTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSV 691
G KGH V +++ G +LVS + +++WD R + V
Sbjct: 202 HGYTPTIAKGHKESVYALAMNDTGT-MLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRV 260
Query: 692 LFNDTAEKI-LSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLS 820
L D+ + LS D++I++WD+ + HTD+V L+
Sbjct: 261 LLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALA 304
Score = 43.6 bits (98), Expect = 2e-04
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 5/116 (4%)
Frame = +2
Query: 428 IMQLCFSPDGSHLYTGATDNTVAVW--DVPTGTRIKKLKGHANFVNSVSGARRGPELLVS 601
+++ S D S+L+TG+ D T+ W D + H ++VN + A G LVS
Sbjct: 43 VLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALA--GESTLVS 100
Query: 602 ASDDNTIKLWDARKRNPVASF---DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDI 760
S D T+K WD S Y + + S G+ + +WDI
Sbjct: 101 CSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDI 156
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 60.5 bits (140), Expect = 2e-09
Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 17/210 (8%)
Frame = +2
Query: 272 MLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSP 451
+L++GH+ + +++ EG L S D +W E + +GH GA+ S
Sbjct: 4 ILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFA-DNGERLGTYRGHNGAVWCCDVSR 62
Query: 452 DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASD---DNTI 622
D S L TG+ D T +WDV +G + K +A SV A G L V +D D T
Sbjct: 63 DSSRLITGSADQTAKLWDVKSGKELFTFKFNAP-TRSVDFA-VGDRLAVITTDHFVDRTA 120
Query: 623 KL-----------WDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNN 769
+ DA + D + ++ + I+S G D VI++WD
Sbjct: 121 AIHVKRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAETG 180
Query: 770 QIXLKIK---GHTDTVTGLSLSWDGAYLLS 850
++ + GH +T L + D ++ L+
Sbjct: 181 KLLKQSDEEVGHKKDITSLCKAADDSHFLT 210
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +2
Query: 308 AKFHPEGKHLASAGFDRQILIWNVY-GQCENVMVMK-GHTGAIMQLCFSPDGSHLYTGAT 481
A + P + + S G D+ I IW+ G+ + GH I LC + D SH TG+
Sbjct: 154 AVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSL 213
Query: 482 DNTVAVWDVPTGTRIK 529
D T +WD+ T T +K
Sbjct: 214 DKTAKLWDMRTLTLLK 229
Score = 32.7 bits (71), Expect = 0.35
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +2
Query: 587 ELLVSASDDNTIKLWDARKRNPVASFDSSY----PVTSVLFNDTAEKILSSGVDNVIKMW 754
+ +VS +D I++WDA + D +TS+ L+ +D K+W
Sbjct: 161 QTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLW 220
Query: 755 DIRNNQIXLKIKGHTDTVTGLSLS 826
D+R + LK V +SLS
Sbjct: 221 DMRTLTL-LKTYTTVVPVNAVSLS 243
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 60.5 bits (140), Expect = 2e-09
Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 17/210 (8%)
Frame = +2
Query: 272 MLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSP 451
+L++GH+ + +++ EG L S D +W E + +GH GA+ S
Sbjct: 4 ILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFA-DNGERLGTYRGHNGAVWCCDVSR 62
Query: 452 DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASD---DNTI 622
D S L TG+ D T +WDV +G + K +A SV A G L V +D D T
Sbjct: 63 DSSRLITGSADQTAKLWDVKSGKELFTFKFNAP-TRSVDFA-VGDRLAVITTDHFVDRTA 120
Query: 623 KL-----------WDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNN 769
+ DA + D + ++ + I+S G D VI++WD
Sbjct: 121 AIHVKRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAETG 180
Query: 770 QIXLKIK---GHTDTVTGLSLSWDGAYLLS 850
++ + GH +T L + D ++ L+
Sbjct: 181 KLLKQSDEEVGHKKDITSLCKAADDSHFLT 210
Score = 43.6 bits (98), Expect = 2e-04
Identities = 41/176 (23%), Positives = 73/176 (41%), Gaps = 16/176 (9%)
Frame = +2
Query: 308 AKFHPEGKHLASAGFDRQILIWNVY-GQCENVMVMK-GHTGAIMQLCFSPDGSHLYTGAT 481
A + P + + S G D+ I IW+ G+ + GH I LC + D SH TG+
Sbjct: 154 AVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSL 213
Query: 482 DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNT-------------I 622
D T +WD+ T T +K VN+VS + +++ D +
Sbjct: 214 DKTAKLWDMRTLTLLKTYTTVVP-VNAVSLSPLLNHVVLGGGQDASAVTTTDHRAGKFEA 272
Query: 623 KLWDARKRNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKI 787
K +D + + + P+ ++ FN + S G D +++ ++ +KI
Sbjct: 273 KFYDKILQEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRLHHFDSDYFNIKI 328
Score = 32.7 bits (71), Expect = 0.35
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +2
Query: 587 ELLVSASDDNTIKLWDARKRNPVASFDSSY----PVTSVLFNDTAEKILSSGVDNVIKMW 754
+ +VS +D I++WDA + D +TS+ L+ +D K+W
Sbjct: 161 QTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLW 220
Query: 755 DIRNNQIXLKIKGHTDTVTGLSLS 826
D+R + LK V +SLS
Sbjct: 221 DMRTLTL-LKTYTTVVPVNAVSLS 243
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 60.5 bits (140), Expect = 2e-09
Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 17/210 (8%)
Frame = +2
Query: 272 MLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSP 451
+L++GH+ + +++ EG L S D +W E + +GH GA+ S
Sbjct: 4 ILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFA-DNGERLGTYRGHNGAVWCCDVSR 62
Query: 452 DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASD---DNTI 622
D S L TG+ D T +WDV +G + K +A SV A G L V +D D T
Sbjct: 63 DSSRLITGSADQTAKLWDVKSGKELFTFKFNAP-TRSVDFA-VGDRLAVITTDHFVDRTA 120
Query: 623 KL-----------WDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNN 769
+ DA + D + ++ + I+S G D VI++WD
Sbjct: 121 AIHVKRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAETG 180
Query: 770 QIXLKIK---GHTDTVTGLSLSWDGAYLLS 850
++ + GH +T L + D ++ L+
Sbjct: 181 KLLKQSDEEVGHKKDITSLCKAADDSHFLT 210
Score = 43.6 bits (98), Expect = 2e-04
Identities = 41/176 (23%), Positives = 73/176 (41%), Gaps = 16/176 (9%)
Frame = +2
Query: 308 AKFHPEGKHLASAGFDRQILIWNVY-GQCENVMVMK-GHTGAIMQLCFSPDGSHLYTGAT 481
A + P + + S G D+ I IW+ G+ + GH I LC + D SH TG+
Sbjct: 154 AVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSL 213
Query: 482 DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNT-------------I 622
D T +WD+ T T +K VN+VS + +++ D +
Sbjct: 214 DKTAKLWDMRTLTLLKTYTTVVP-VNAVSLSPLLNHVVLGGGQDASAVTTTDHRAGKFEA 272
Query: 623 KLWDARKRNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKI 787
K +D + + + P+ ++ FN + S G D +++ ++ +KI
Sbjct: 273 KFYDKILQEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRLHHFDSDYFNIKI 328
Score = 32.7 bits (71), Expect = 0.35
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +2
Query: 587 ELLVSASDDNTIKLWDARKRNPVASFDSSY----PVTSVLFNDTAEKILSSGVDNVIKMW 754
+ +VS +D I++WDA + D +TS+ L+ +D K+W
Sbjct: 161 QTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLW 220
Query: 755 DIRNNQIXLKIKGHTDTVTGLSLS 826
D+R + LK V +SLS
Sbjct: 221 DMRTLTL-LKTYTTVVPVNAVSLS 243
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 60.5 bits (140), Expect = 2e-09
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 11/177 (6%)
Frame = +2
Query: 263 APIMLLEGHQGEIFTAKFHPE-GKHLASAGFDRQILIWNVYGQCENV--MVMKGHTGAIM 433
AP++ GH+ E + + P L S I +W V + GHT ++
Sbjct: 214 APLVNFSGHKDEGYAIDWSPATAGRLLSGDCKSMIHLWEPASGSWAVDPIPFAGHTASVE 273
Query: 434 QLCFSPDGSHLYTGAT-DNTVAVWDVPTG-TRIKKLKGHANFVNSVSGARRGPELLVSAS 607
L +SP +++ + D +VAVWD+ G + K H VN +S R +L S S
Sbjct: 274 DLQWSPAEENVFASCSVDGSVAVWDIRLGKSPALSFKAHNADVNVISWNRLASCMLASGS 333
Query: 608 DDNTIKLWDARKRN----PVASFD-SSYPVTSVLFN-DTAEKILSSGVDNVIKMWDI 760
DD T + D R VA F+ +P+TS+ ++ A + + DN + +WD+
Sbjct: 334 DDGTFSIRDLRLIKGGDAVVAHFEYHKHPITSIEWSAHEASTLAVTSGDNQLTIWDL 390
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 60.1 bits (139), Expect = 2e-09
Identities = 46/201 (22%), Positives = 84/201 (41%), Gaps = 15/201 (7%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDG 457
L+GH G++++ + PE + SA D ++++WN + +K +M FSP+G
Sbjct: 61 LQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNAL-TSQKTHAIKLPCAWVMTCAFSPNG 119
Query: 458 SHLYTGATDNTVAVWDVPT-----GT--RIKKLKGHANFVNSVSGARRGPELLVSASDDN 616
+ G D+ +++ + + GT + L GH +V+ L+++S D
Sbjct: 120 QSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQ 179
Query: 617 TIKLWDARKRNPVASFDSSY------PVTSV-LFNDTAEKILSSGVDNVIKMWDIR-NNQ 772
T LWD + F + V SV + +S D+ ++WD R ++
Sbjct: 180 TCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASR 239
Query: 773 IXLKIKGHTDTVTGLSLSWDG 835
GH V + DG
Sbjct: 240 AVRTFHGHEGDVNTVKFFPDG 260
Score = 50.4 bits (115), Expect = 2e-06
Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 5/122 (4%)
Frame = +2
Query: 284 GHQGEIFTAKFHPEGKH-LASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGS 460
GH ++ + + S D +W+ V GH G + + F PDG
Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGY 261
Query: 461 HLYTGATDNTVAVWDVPTGTRIKKLKGHANF----VNSVSGARRGPELLVSASDDNTIKL 628
TG+ D T ++D+ TG +++ + H + V S++ + G L + +NT +
Sbjct: 262 RFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNNTCYV 321
Query: 629 WD 634
WD
Sbjct: 322 WD 323
Score = 44.0 bits (99), Expect = 1e-04
Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 10/118 (8%)
Frame = +2
Query: 194 ISVVGTREKAVVTSSVPRTSNLY------APIMLLEGHQGEIFTAKFHPEGKHLASAGFD 355
+S+ G+ ++ S T+ L+ + GH+G++ T KF P+G + D
Sbjct: 210 VSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDD 269
Query: 356 RQILIWNVYGQCENVMVM---KGHTGAIMQLCFSPDGSHLYTG-ATDNTVAVWDVPTG 517
++++ + + G G + + FS G L+ G A++NT VWD G
Sbjct: 270 GTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLG 327
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 60.1 bits (139), Expect = 2e-09
Identities = 46/201 (22%), Positives = 84/201 (41%), Gaps = 15/201 (7%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDG 457
L+GH G++++ + PE + SA D ++++WN + +K +M FSP+G
Sbjct: 61 LQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNAL-TSQKTHAIKLPCAWVMTCAFSPNG 119
Query: 458 SHLYTGATDNTVAVWDVPT-----GT--RIKKLKGHANFVNSVSGARRGPELLVSASDDN 616
+ G D+ +++ + + GT + L GH +V+ L+++S D
Sbjct: 120 QSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQ 179
Query: 617 TIKLWDARKRNPVASFDSSY------PVTSV-LFNDTAEKILSSGVDNVIKMWDIR-NNQ 772
T LWD + F + V SV + +S D+ ++WD R ++
Sbjct: 180 TCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASR 239
Query: 773 IXLKIKGHTDTVTGLSLSWDG 835
GH V + DG
Sbjct: 240 AVRTFHGHEGDVNTVKFFPDG 260
Score = 50.4 bits (115), Expect = 2e-06
Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 5/122 (4%)
Frame = +2
Query: 284 GHQGEIFTAKFHPEGKH-LASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGS 460
GH ++ + + S D +W+ V GH G + + F PDG
Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGY 261
Query: 461 HLYTGATDNTVAVWDVPTGTRIKKLKGHANF----VNSVSGARRGPELLVSASDDNTIKL 628
TG+ D T ++D+ TG +++ + H + V S++ + G L + +NT +
Sbjct: 262 RFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNNTCYV 321
Query: 629 WD 634
WD
Sbjct: 322 WD 323
Score = 50.4 bits (115), Expect = 2e-06
Identities = 37/160 (23%), Positives = 69/160 (43%), Gaps = 14/160 (8%)
Frame = +2
Query: 194 ISVVGTREKAVVTSSVPRTSNLY------APIMLLEGHQGEIFTAKFHPEGKHLASAGFD 355
+S+ G+ ++ S T+ L+ + GH+G++ T KF P+G + D
Sbjct: 210 VSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDD 269
Query: 356 RQILIWNVYGQCENVMVM---KGHTGAIMQLCFSPDGSHLYTG-ATDNTVAVWDVPTGTR 523
++++ + + G G + + FS G L+ G A++NT VWD G
Sbjct: 270 GTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEV 329
Query: 524 IKKL----KGHANFVNSVSGARRGPELLVSASDDNTIKLW 631
+ L H N ++ + + G L + D N +K+W
Sbjct: 330 VLDLGLQQDSHRNRISCLGLSADGSALCTGSWDSN-LKIW 368
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 60.1 bits (139), Expect = 2e-09
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Frame = +2
Query: 458 SHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDA 637
+H+ + + V VWDV T + + + H SV +R P +LVS SDD +K+W
Sbjct: 434 NHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCT 493
Query: 638 RKRNPVASFDSSYPVTSVLFNDTAEKILSSG-VDNVIKMWDIRNNQIXLKI-KGHTDTVT 811
R+ V + D + V +N + ++ G D+ I +D+RN L + GH V+
Sbjct: 494 RQEASVINIDMKANICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVFSGHKKAVS 553
Score = 52.4 bits (120), Expect = 4e-07
Identities = 39/176 (22%), Positives = 79/176 (44%), Gaps = 2/176 (1%)
Frame = +2
Query: 323 EGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFS-PDGSHLYTGATDNTVAV 499
E H+AS+ ++ + +W+V + +++M + H + FS + S L +G+ D V V
Sbjct: 432 EKNHIASSDYEGIVTVWDVTTR-QSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKV 490
Query: 500 WDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK-RNPVASFDSSY 676
W + + AN + V + S D+ I +D R P+ F
Sbjct: 491 WCTRQEASVINIDMKAN-ICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVFSGHK 549
Query: 677 PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYL 844
S + + ++ S+ D+ +++WD+++N +GHT+ + L+ + YL
Sbjct: 550 KAVSYVKFLSNNELASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVNSEYL 605
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 59.7 bits (138), Expect = 3e-09
Identities = 38/132 (28%), Positives = 56/132 (42%), Gaps = 2/132 (1%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVY-GQC-ENVMVMKGHTGAIMQLCFSP 451
L+ H E+ H K+ SA D +++ G C V + F P
Sbjct: 305 LKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAAFHP 364
Query: 452 DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLW 631
DG L TG + V +WDV + + K GH + S+S + G L +A D ++LW
Sbjct: 365 DGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALDG--VRLW 422
Query: 632 DARKRNPVASFD 667
D RK +FD
Sbjct: 423 DLRKLKNFRTFD 434
Score = 54.8 bits (126), Expect = 7e-08
Identities = 35/167 (20%), Positives = 80/167 (47%), Gaps = 5/167 (2%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVY--GQCENVMVMKGHTGAIMQLCFSP 451
L GH ++ + KF + + +A D+ + IW G + +K H+ + +
Sbjct: 260 LTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTVHA 319
Query: 452 DGSHLYTGATDNTVAVWDVPTGTRIKKL-KGHANFVNSVSGARRGPELLV-SASDDNTIK 625
+ + + D+T +D+ +G + ++ N VN + A L++ + + + +K
Sbjct: 320 TNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAAFHPDGLILGTGTAQSIVK 379
Query: 626 LWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDIR 763
+WD + + VA F + +TS+ F++ + ++ +D V ++WD+R
Sbjct: 380 IWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALDGV-RLWDLR 425
Score = 50.4 bits (115), Expect = 2e-06
Identities = 41/178 (23%), Positives = 80/178 (44%), Gaps = 8/178 (4%)
Frame = +2
Query: 335 LASAGFDRQILIWN-VYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVP 511
+A+ G D ++++ GQ + + GH+ + + F D + T ++D TV +W
Sbjct: 237 IATGGIDTTAVLFDRPSGQI--LSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCS 294
Query: 512 TG---TRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASF----DS 670
T LK H+ V +V+ + VSAS D+T +D +A ++
Sbjct: 295 EDGNYTSRHTLKDHSAEVRAVT-VHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASEN 353
Query: 671 SYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYL 844
T+ F+ + + +++K+WD+++ K GH +T +S S +G +L
Sbjct: 354 DVNYTAAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFL 411
>At5g52250.1 68418.m06485 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to photomorphogenesis repressor PnCOP1
(GI:11127996) [Ipomoea nil]
Length = 385
Score = 59.3 bits (137), Expect = 3e-09
Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 3/127 (2%)
Frame = +2
Query: 284 GHQGEIFTAKFHPEGKHLASAGF-DRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGS 460
G I + +F P G + G DR ++++ + ++V+ GHT + F D
Sbjct: 210 GGGAAICSVEFDPFGGSSIAVGCADRNAYVYDIRRLVDPLIVLDGHTKTVTYARFM-DSH 268
Query: 461 HLYTGATDNTVAVWDVPTGTR-IKKLKGHANFVNSVS-GARRGPELLVSASDDNTIKLWD 634
+ TG+TD ++ WD+ G R ++ +GH N N V R L+VS S++N + ++D
Sbjct: 269 TIVTGSTDGSLKQWDIDNGRRVVRTYRGHVNSRNFVGLSVWRHGGLVVSGSENNQVFVYD 328
Query: 635 ARKRNPV 655
R PV
Sbjct: 329 KRWEEPV 335
Score = 35.5 bits (78), Expect = 0.049
Identities = 44/183 (24%), Positives = 75/183 (40%), Gaps = 16/183 (8%)
Frame = +2
Query: 311 KFHPEGKHLASAGFDRQILIWNVYGQCEN----VMVMKGHT---GAIMQLCFSPD--GSH 463
+F P G+ +A+ G R+I + + E+ V + + + L + PD G
Sbjct: 78 EFDPTGEIIATGGIARKIRSYRLSSLLESRDDHVTASESYICTPAKLSSLKWRPDFSGRV 137
Query: 464 LYTGATDNTVAVWDVPTGTRIKKLKGHANF-VNSVSGARRGPELL-VSASDDNTIKLWDA 637
+ +G D V +DV + + H + SV L+ S SDD T+++WD
Sbjct: 138 IGSGDYDGVVTEYDVEKQVPVSERDEHGGRRIWSVDYTLYNGSLIGASGSDDGTVQMWDP 197
Query: 638 RKRNPVASF---DSSYPVTSVLFNDTAEKILSSG-VDNVIKMWDIRN-NQIXLKIKGHTD 802
R + + SV F+ ++ G D ++DIR + + GHT
Sbjct: 198 RNGGTLEETVRPGGGAAICSVEFDPFGGSSIAVGCADRNAYVYDIRRLVDPLIVLDGHTK 257
Query: 803 TVT 811
TVT
Sbjct: 258 TVT 260
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 59.3 bits (137), Expect = 3e-09
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 4/176 (2%)
Frame = +2
Query: 335 LASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 514
L+S D+ IL ++ Q ++V + GH + L +S D L +G DN + VW+ +
Sbjct: 307 LSSGSRDKSILQRDIRCQEDHVSKLAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHS 366
Query: 515 GTRIKKLKGHANFVNSVSGARRGPELLVS--ASDDNTIKLWDARKRNPVASFDSSYPVTS 688
+ K H V +++ + LL S + D I+ W+ ++S D+ V +
Sbjct: 367 TQPVLKYSEHTAAVKAIAWSPHVHGLLASGGGTADRCIRFWNTTTNTHLSSIDTCSQVCN 426
Query: 689 VLFNDTAEKILSSG--VDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
+ ++ +++S+ N I +W + GHT V L++S DG +++
Sbjct: 427 LAWSKNVNELVSTHGYSQNQIIVWKYPTMSKIATLTGHTYRVLYLAVSPDGQTIVT 482
Score = 58.8 bits (136), Expect = 5e-09
Identities = 37/189 (19%), Positives = 79/189 (41%), Gaps = 4/189 (2%)
Frame = +2
Query: 206 GTREKAVVTSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYG 385
G+R+K+++ + + + L GH+ E+ K+ + + LAS G D ++ +WN +
Sbjct: 310 GSRDKSILQRDIRCQED---HVSKLAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQH- 365
Query: 386 QCENVMVMKGHTGAIMQLCFSPDGSHLYT---GATDNTVAVWDVPTGTRIKKLKGHANFV 556
+ V+ HT A+ + +SP L G D + W+ T T + + +
Sbjct: 366 STQPVLKYSEHTAAVKAIAWSPHVHGLLASGGGTADRCIRFWNTTTNTHLSSIDTCSQVC 425
Query: 557 NSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGV 733
N + N I +W + +A+ +Y V + + + I++
Sbjct: 426 NLAWSKNVNELVSTHGYSQNQIIVWKYPTMSKIATLTGHTYRVLYLAVSPDGQTIVTGAG 485
Query: 734 DNVIKMWDI 760
D ++ W++
Sbjct: 486 DETLRFWNV 494
Score = 52.0 bits (119), Expect = 5e-07
Identities = 41/181 (22%), Positives = 79/181 (43%), Gaps = 2/181 (1%)
Frame = +2
Query: 329 KHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 508
+++ + G + +WN + G ++ + ++ G+HL G + V +WD
Sbjct: 222 QNVLAVGLGNCVYLWNACSSKVTKLCDLGAEDSVCSVGWALRGTHLAVGTSTGKVQIWDA 281
Query: 509 PTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY--PV 682
R + ++GH V +++ G +L S S D +I D R + S + + V
Sbjct: 282 SRCKRTRTMEGHRLRVGALAW---GSSVLSSGSRDKSILQRDIRCQEDHVSKLAGHKSEV 338
Query: 683 TSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLSINGY 862
+ ++ ++ S G DN + +W+ + Q LK HT V ++ S LL+ G
Sbjct: 339 CGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHVHGLLASGGG 398
Query: 863 T 865
T
Sbjct: 399 T 399
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/70 (24%), Positives = 28/70 (40%)
Frame = +2
Query: 173 SKRVRHEISVVGTREKAVVTSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGF 352
SK V +S G + ++ P S I L GH + P+G+ + +
Sbjct: 430 SKNVNELVSTHGYSQNQIIVWKYPTMSK----IATLTGHTYRVLYLAVSPDGQTIVTGAG 485
Query: 353 DRQILIWNVY 382
D + WNV+
Sbjct: 486 DETLRFWNVF 495
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 59.3 bits (137), Expect = 3e-09
Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 13/179 (7%)
Frame = +2
Query: 314 FHPEGKHLASAGFDRQILIWNVYGQCENVM----------VMKGHTGAIMQLCF-SPDGS 460
F +G+ A+AG +++I I+ +CE+++ V + +C+ S S
Sbjct: 492 FDRDGEFFATAGVNKKIKIF----ECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKS 547
Query: 461 HLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDAR 640
+ + + V VWDV + ++K H V S+ + P LL S SDD ++KLW
Sbjct: 548 QVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSIN 607
Query: 641 KRNPVASFDSSYPVTSVLF-NDTAEKILSSGVDNVIKMWDIRNNQIXL-KIKGHTDTVT 811
+ + + + + V F ++T + D+ + +D+RN ++ L + GH TV+
Sbjct: 608 QGVSIGTIKTKANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVS 666
Score = 56.0 bits (129), Expect = 3e-08
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 8/178 (4%)
Frame = +2
Query: 335 LASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVP 511
+AS+ F+ + +W+V + + V MK H + + +S D + L +G+ D +V +W +
Sbjct: 549 VASSNFEGVVQVWDV-ARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSIN 607
Query: 512 TGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK-RNPVASFDSSYPVTS 688
G I +K AN + G L ++D + + +D R + P+ + + S
Sbjct: 608 QGVSIGTIKTKANICCVQFPSETGRSLAFGSAD-HKVYYYDLRNPKLPLCTMIGHHKTVS 666
Query: 689 VLFNDTAEKILSSGVDNVIKMWDIRN-----NQIXL-KIKGHTDTVTGLSLSWDGAYL 844
+ + ++SS DN +K+WD+ N+ L GHT+ + LS Y+
Sbjct: 667 YVRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYI 724
Score = 40.7 bits (91), Expect = 0.001
Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 8/141 (5%)
Frame = +2
Query: 326 GKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 505
G+ LA D ++ +++ + M GH + + F D S L + +TDNT+ +WD
Sbjct: 631 GRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRFV-DSSTLVSSSTDNTLKLWD 689
Query: 506 VPTG------TRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS-- 661
+ T + GH N N V G + + S+ N + ++ PV S
Sbjct: 690 LSMSISGINETPLHSFMGHTNVKNFV-GLSVSDGYIATGSETNEVFVYHKAFPMPVLSYK 748
Query: 662 FDSSYPVTSVLFNDTAEKILS 724
F + PV+ + +D ++ I S
Sbjct: 749 FKTIDPVSELEVDDASQFISS 769
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 650 PVASFDSSYPVTSVLFNDTAE-KILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLS 826
PV S ++ + +N + ++ SS + V+++WD+ NQ+ ++K H V + S
Sbjct: 526 PVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYS 585
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 59.3 bits (137), Expect = 3e-09
Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 13/179 (7%)
Frame = +2
Query: 314 FHPEGKHLASAGFDRQILIWNVYGQCENVM----------VMKGHTGAIMQLCF-SPDGS 460
F +G+ A+AG +++I I+ +CE+++ V + +C+ S S
Sbjct: 492 FDRDGEFFATAGVNKKIKIF----ECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKS 547
Query: 461 HLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDAR 640
+ + + V VWDV + ++K H V S+ + P LL S SDD ++KLW
Sbjct: 548 QVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSIN 607
Query: 641 KRNPVASFDSSYPVTSVLF-NDTAEKILSSGVDNVIKMWDIRNNQIXL-KIKGHTDTVT 811
+ + + + + V F ++T + D+ + +D+RN ++ L + GH TV+
Sbjct: 608 QGVSIGTIKTKANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVS 666
Score = 56.0 bits (129), Expect = 3e-08
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 8/178 (4%)
Frame = +2
Query: 335 LASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVP 511
+AS+ F+ + +W+V + + V MK H + + +S D + L +G+ D +V +W +
Sbjct: 549 VASSNFEGVVQVWDV-ARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSIN 607
Query: 512 TGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK-RNPVASFDSSYPVTS 688
G I +K AN + G L ++D + + +D R + P+ + + S
Sbjct: 608 QGVSIGTIKTKANICCVQFPSETGRSLAFGSAD-HKVYYYDLRNPKLPLCTMIGHHKTVS 666
Query: 689 VLFNDTAEKILSSGVDNVIKMWDIRN-----NQIXL-KIKGHTDTVTGLSLSWDGAYL 844
+ + ++SS DN +K+WD+ N+ L GHT+ + LS Y+
Sbjct: 667 YVRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYI 724
Score = 40.7 bits (91), Expect = 0.001
Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 8/141 (5%)
Frame = +2
Query: 326 GKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 505
G+ LA D ++ +++ + M GH + + F D S L + +TDNT+ +WD
Sbjct: 631 GRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRFV-DSSTLVSSSTDNTLKLWD 689
Query: 506 VPTG------TRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS-- 661
+ T + GH N N V G + + S+ N + ++ PV S
Sbjct: 690 LSMSISGINETPLHSFMGHTNVKNFV-GLSVSDGYIATGSETNEVFVYHKAFPMPVLSYK 748
Query: 662 FDSSYPVTSVLFNDTAEKILS 724
F + PV+ + +D ++ I S
Sbjct: 749 FKTIDPVSELEVDDASQFISS 769
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 650 PVASFDSSYPVTSVLFNDTAE-KILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLS 826
PV S ++ + +N + ++ SS + V+++WD+ NQ+ ++K H V + S
Sbjct: 526 PVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYS 585
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 59.3 bits (137), Expect = 3e-09
Identities = 42/163 (25%), Positives = 68/163 (41%), Gaps = 1/163 (0%)
Frame = +2
Query: 281 EGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGS 460
EGH+G +++ ASA D IWN E + H + FS D
Sbjct: 53 EGHKGAVWSCSLDKNAIRAASASADFTAKIWNALTGDE--LHSFEHKHIVRACAFSEDTH 110
Query: 461 HLYTGATDNTVAVWDVPTGTRIKKLKGHA-NFVNSVSGARRGPELLVSASDDNTIKLWDA 637
L TG + + ++D+ K G++ + +V +L S +D I+LWD
Sbjct: 111 RLLTGGMEKILRIFDLNRPDAPPKEVGNSPGSIRTVEWLHSDNTILSSCTDTGDIRLWDI 170
Query: 638 RKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRN 766
R V + ++ PVTS + I ++ +V K WD +N
Sbjct: 171 RSDKIVHTLETKSPVTSAEVSQDGRYITTADGSSV-KFWDAKN 212
Score = 56.4 bits (130), Expect = 2e-08
Identities = 34/136 (25%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Frame = +2
Query: 401 MVMKGHTGAIMQLCFSP---DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 571
+V GH+ ++ + +SP DG L + + D+ + + TG I +GH V S S
Sbjct: 5 LVCHGHSRPVVDVAYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSL 64
Query: 572 ARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKM 751
+ SAS D T K+W+A + + SF+ + V + F++ ++L+ G++ ++++
Sbjct: 65 DKNAIRA-ASASADFTAKIWNALTGDELHSFEHKHIVRACAFSEDTHRLLTGGMEKILRI 123
Query: 752 WDIRNNQIXLKIKGHT 799
+D+ K G++
Sbjct: 124 FDLNRPDAPPKEVGNS 139
Score = 33.9 bits (74), Expect = 0.15
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = +2
Query: 455 GSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLW 631
G+ G D V +D TG I KGH V+ V A G E S S+D T+++W
Sbjct: 235 GNTFIAGGEDMWVHRFDFQTGEEIGCNKGHHGPVHCVRYAPGG-ESYTSGSEDGTVRIW 292
Score = 33.1 bits (72), Expect = 0.26
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +2
Query: 392 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK--LKGHANFV 556
E + KGH G + + ++P G +G+ D TV +W V + ++ L GH V
Sbjct: 256 EEIGCNKGHHGPVHCVRYAPGGESYTSGSEDGTVRIWVVGSVNHPEESNLSGHVKLV 312
Score = 31.9 bits (69), Expect = 0.60
Identities = 31/172 (18%), Positives = 72/172 (41%), Gaps = 2/172 (1%)
Frame = +2
Query: 287 HQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHL 466
H+ + F + L + G ++ + I+++ + G+I + + + +
Sbjct: 96 HKHIVRACAFSEDTHRLLTGGMEKILRIFDLNRPDAPPKEVGNSPGSIRTVEWLHSDNTI 155
Query: 467 YTGATDN-TVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK 643
+ TD + +WD+ + + L+ + V S ++ G ++ +D +++K WDA+
Sbjct: 156 LSSCTDTGDIRLWDIRSDKIVHTLETKSP-VTSAEVSQDGR--YITTADGSSVKFWDAKN 212
Query: 644 RNPVASFDSSYPVTSV-LFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGH 796
+ S+D V S L ++ G D + +D + + KGH
Sbjct: 213 FGLLKSYDMPCNVESASLEPKHGNTFIAGGEDMWVHRFDFQTGEEIGCNKGH 264
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 58.8 bits (136), Expect = 5e-09
Identities = 34/133 (25%), Positives = 68/133 (51%), Gaps = 12/133 (9%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVY----GQCENVMVMKGHTGAIMQ 436
+ +L GH+ E+ + ++ G LA+ G D+ + IW + + + + V+ GH+ +
Sbjct: 85 VSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKM 144
Query: 437 LCFSPDGSHLYTGATDNTVAVW-------DVPTGTRIKKL-KGHANFVNSVSGARRGPEL 592
+ + P L++ + DNT+ +W D + +L GH++ V S+S G +
Sbjct: 145 VLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSISFNAAG-DK 203
Query: 593 LVSASDDNTIKLW 631
+V+ SDD +K+W
Sbjct: 204 MVTCSDDLAVKIW 216
Score = 53.2 bits (122), Expect = 2e-07
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 15/150 (10%)
Frame = +2
Query: 350 FDRQILIW-NVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG--- 517
FD +W N E+V V++GH + + ++ GS L T D +V +W++
Sbjct: 68 FDGNTCVWENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDD 127
Query: 518 --TRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKR----NPVASFDS--- 670
I L GH+ V V ++L S S DNTIK+W + N V +
Sbjct: 128 EFDTIAVLTGHSEDVKMVLW-HPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNN 186
Query: 671 --SYPVTSVLFNDTAEKILSSGVDNVIKMW 754
S V S+ FN +K+++ D +K+W
Sbjct: 187 GHSSTVWSISFNAAGDKMVTCSDDLAVKIW 216
Score = 40.3 bits (90), Expect = 0.002
Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 20/160 (12%)
Frame = +2
Query: 212 REKAV-VTSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIW---NV 379
R+K+V + P + + I +L GH ++ +HP L S +D I IW +
Sbjct: 112 RDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDE 171
Query: 380 YGQCENVMVM----KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG---------- 517
G V + GH+ + + F+ G + T + D V +W
Sbjct: 172 DGDYNCVQTLSELNNGHSSTVWSISFNAAGDKMVTCSDDLAVKIWKTDISRMQSGEGYVP 231
Query: 518 -TRIKKLKG-HANFVNSVSGARRGPELLVSASDDNTIKLW 631
T + L G H + SV +R G ++ S + D+TI+L+
Sbjct: 232 WTHVCTLSGFHDRTIYSVHWSRDG--VIASGAGDDTIQLF 269
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +2
Query: 524 IKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD 634
++KL+GH + V +V+ ++ S S D T+++W+
Sbjct: 13 VQKLEGHTDRVWNVAWNPAADGVIASCSADKTVRIWE 49
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 58.4 bits (135), Expect = 6e-09
Identities = 53/219 (24%), Positives = 96/219 (43%), Gaps = 24/219 (10%)
Frame = +2
Query: 191 EISVVGTREKAVVTSSVPRTSNLYAPIML---LEGHQGEIFTAKFHPEGKHLASAGFDRQ 361
E++V G+R + V + + + + ++ H+G I KF P+G++LASAG D
Sbjct: 215 EVAVCGSRIERVKVKEYKKEAKELSALFKGQEIQAHEGAILAMKFSPDGRYLASAGEDGV 274
Query: 362 ILIWNVY--GQCENVMVMK----------GHTGAIMQLCFSPD---GSHLYTGATDNTVA 496
+ +W+V +CE V K + + D GS + T +
Sbjct: 275 LRVWSVVEDERCEEHDVPKIDPSCIYFEVSKLSELRPVAVEKDGITGSLMSPRKTTESAC 334
Query: 497 VWDVPTGTRI-----KKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS 661
V P R+ + GH+ + +S ++ L+SAS DN+++LW + +
Sbjct: 335 VIIPPKIFRVLDKPLHEFLGHSGDILDISWSKN--NRLLSASVDNSVRLWQIGCEDCLGI 392
Query: 662 FDSSYPVTSVLFNDT-AEKILSSGVDNVIKMWDIRNNQI 775
F + VTSV FN + +S +D +++W Q+
Sbjct: 393 FSHNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQCQV 431
Score = 46.0 bits (104), Expect = 3e-05
Identities = 28/128 (21%), Positives = 63/128 (49%)
Frame = +2
Query: 413 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 592
GH+G I+ + +S + + L + + DN+V +W + + + H N+V SV +
Sbjct: 354 GHSGDILDISWSKN-NRLLSASVDNSVRLWQIGCEDCLG-IFSHNNYVTSVQFNPVDDDH 411
Query: 593 LVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQ 772
+S S D +++W A + V D+ VT+V + + ++ + + + +++ +
Sbjct: 412 FISGSIDGKVRIWSASQCQVVDWADARGIVTAVCYQPDGQAVIIGTLTSDCRFYNVSGH- 470
Query: 773 IXLKIKGH 796
L++ GH
Sbjct: 471 -CLQLDGH 477
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 293 GEIFTAKFHPEGKHLASAGFDRQILIWNVYG 385
G +A F +GKH+ SA D + +WN G
Sbjct: 536 GNQISASFTADGKHIVSACDDSSVYVWNCVG 566
Score = 29.9 bits (64), Expect = 2.4
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +2
Query: 446 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP-ELLVSASDDNTI 622
S D S + + D+ V + + + K KG N N +S + + +VSA DD+++
Sbjct: 502 STDPSRVMVASADSQVRI--ISGRNVVHKYKGSRNAGNQISASFTADGKHIVSACDDSSV 559
Query: 623 KLWDARKRNPVASFDSSYPVTSVLFNDTAEK 715
+W+ +P S + T L + EK
Sbjct: 560 YVWNCVGHDPEQSSPGFFSHTKRLKIRSFEK 590
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 58.4 bits (135), Expect = 6e-09
Identities = 53/219 (24%), Positives = 96/219 (43%), Gaps = 24/219 (10%)
Frame = +2
Query: 191 EISVVGTREKAVVTSSVPRTSNLYAPIML---LEGHQGEIFTAKFHPEGKHLASAGFDRQ 361
E++V G+R + V + + + + ++ H+G I KF P+G++LASAG D
Sbjct: 215 EVAVCGSRIERVKVKEYKKEAKELSALFKGQEIQAHEGAILAMKFSPDGRYLASAGEDGV 274
Query: 362 ILIWNVY--GQCENVMVMK----------GHTGAIMQLCFSPD---GSHLYTGATDNTVA 496
+ +W+V +CE V K + + D GS + T +
Sbjct: 275 LRVWSVVEDERCEEHDVPKIDPSCIYFEVSKLSELRPVAVEKDGITGSLMSPRKTTESAC 334
Query: 497 VWDVPTGTRI-----KKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS 661
V P R+ + GH+ + +S ++ L+SAS DN+++LW + +
Sbjct: 335 VIIPPKIFRVLDKPLHEFLGHSGDILDISWSKN--NRLLSASVDNSVRLWQIGCEDCLGI 392
Query: 662 FDSSYPVTSVLFNDT-AEKILSSGVDNVIKMWDIRNNQI 775
F + VTSV FN + +S +D +++W Q+
Sbjct: 393 FSHNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQCQV 431
Score = 46.0 bits (104), Expect = 3e-05
Identities = 28/128 (21%), Positives = 63/128 (49%)
Frame = +2
Query: 413 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 592
GH+G I+ + +S + + L + + DN+V +W + + + H N+V SV +
Sbjct: 354 GHSGDILDISWSKN-NRLLSASVDNSVRLWQIGCEDCLG-IFSHNNYVTSVQFNPVDDDH 411
Query: 593 LVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQ 772
+S S D +++W A + V D+ VT+V + + ++ + + + +++ +
Sbjct: 412 FISGSIDGKVRIWSASQCQVVDWADARGIVTAVCYQPDGQAVIIGTLTSDCRFYNVSGH- 470
Query: 773 IXLKIKGH 796
L++ GH
Sbjct: 471 -CLQLDGH 477
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 293 GEIFTAKFHPEGKHLASAGFDRQILIWNVYG 385
G +A F +GKH+ SA D + +WN G
Sbjct: 532 GNQISASFTADGKHIVSACDDSSVYVWNCVG 562
Score = 30.3 bits (65), Expect = 1.8
Identities = 33/151 (21%), Positives = 60/151 (39%), Gaps = 9/151 (5%)
Frame = +2
Query: 290 QGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENV-------MVMKGHTGAIMQLCF- 445
+G + + P+G+ + +NV G C + K I+ F
Sbjct: 438 RGIVTAVCYQPDGQAVIIGTLTSDCRFYNVSGHCLQLDGHICLHNKKKSSNKRIIGFQFD 497
Query: 446 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP-ELLVSASDDNTI 622
S D S + + D+ V + + + K KG N N +S + + +VSA DD+++
Sbjct: 498 STDPSRVMVASADSQVRI--ISGRNVVHKYKGSRNAGNQISASFTADGKHIVSACDDSSV 555
Query: 623 KLWDARKRNPVASFDSSYPVTSVLFNDTAEK 715
+W+ +P S + T L + EK
Sbjct: 556 YVWNCVGHDPEQSSPGFFSHTKRLKIRSFEK 586
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 58.4 bits (135), Expect = 6e-09
Identities = 40/147 (27%), Positives = 73/147 (49%), Gaps = 2/147 (1%)
Frame = +2
Query: 197 SVVGTREKAVVTSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWN 376
++VG ++ + SV +NL +L E H+G + ++ P+ AS +R+ ++W+
Sbjct: 326 AIVGGQDGKLHIYSVSGDNNLKEEAVL-EKHRGALTVIRYSPDLTMFASGDANREAVVWD 384
Query: 377 VYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV--PTGTRIKKLKGHAN 550
+ + M HT I L +SP+ + TG+ D V V++V P +RI H
Sbjct: 385 RETKQVKLNNMLFHTARINSLAWSPNNKMVATGSIDTCVIVYEVDKPASSRITARNAHLG 444
Query: 551 FVNSVSGARRGPELLVSASDDNTIKLW 631
VN+V A + S+ +D +++LW
Sbjct: 445 GVNAV--AFIDDCTVASSGEDASVRLW 469
Score = 39.9 bits (89), Expect = 0.002
Identities = 36/167 (21%), Positives = 71/167 (42%), Gaps = 11/167 (6%)
Frame = +2
Query: 287 HQGEIFTAKFHPEGKHLASAGFDRQILIWN--VYGQCENVMVMKGHTGAIMQLCFSPDGS 460
H + ++ P+G + D++ +I++ + + GH G+I + +SPD
Sbjct: 50 HSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSK 109
Query: 461 HLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNS------VSGARRGPELLVSASDDNTI 622
+ T + D + VW+V I + +F+ S + G + L++ S T+
Sbjct: 110 RVLTVSADKSAKVWEVAEDGTIGSVIKTLSFMESGGAEDMLVGCLWQNDHLITVSLGGTM 169
Query: 623 KLW--DARKRNPVASFDSSYPVTSV-LFNDTAEKILSSGVDNVIKMW 754
L+ D + P+ VTS+ + + + ILS D +I W
Sbjct: 170 SLFSADDMDKPPLLLSGHIKNVTSLAVLGENQKTILSCSYDGLIVKW 216
Score = 36.3 bits (80), Expect = 0.028
Identities = 27/121 (22%), Positives = 56/121 (46%), Gaps = 5/121 (4%)
Frame = +2
Query: 413 GHTGAIMQLCFSPDGS-HLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 589
GH+ ++ F P + T D V +D P + H+NFVN + + G +
Sbjct: 6 GHSRRVLSCAFKPTRPFRIATCGEDFLVNFYDGPPFKFHSSHREHSNFVNCIRYSPDGTK 65
Query: 590 LLVSASDDNTIKLWDAR---KRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWD 757
+ +SD + ++D + K +AS D + +V ++ ++++L+ D K+W+
Sbjct: 66 FITVSSDKKGM-IYDGKTGDKVGELASEDGHKGSIYAVSWSPDSKRVLTVSADKSAKVWE 124
Query: 758 I 760
+
Sbjct: 125 V 125
Score = 33.5 bits (73), Expect = 0.20
Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 7/124 (5%)
Frame = +2
Query: 281 EGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVY--GQCENVM----VMKGHTGAIMQLC 442
+GH+G I+ + P+ K + + D+ +W V G +V+ M+ M +
Sbjct: 93 DGHKGSIYAVSWSPDSKRVLTVSADKSAKVWEVAEDGTIGSVIKTLSFMESGGAEDMLVG 152
Query: 443 FSPDGSHLYTGATDNTVAVWDVPTGTRIK-KLKGHANFVNSVSGARRGPELLVSASDDNT 619
HL T + T++++ + L GH V S++ + ++S S D
Sbjct: 153 CLWQNDHLITVSLGGTMSLFSADDMDKPPLLLSGHIKNVTSLAVLGENQKTILSCSYDGL 212
Query: 620 IKLW 631
I W
Sbjct: 213 IVKW 216
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 58.0 bits (134), Expect = 8e-09
Identities = 47/186 (25%), Positives = 81/186 (43%), Gaps = 11/186 (5%)
Frame = +2
Query: 335 LASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD--- 505
L + G D +I+ +V + V GHT + L +S G L +G DN V +WD
Sbjct: 190 LTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWSESGKKLASGGNDNVVHIWDHRS 249
Query: 506 ----VPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS--DDNTIKLWDARKRNPVASFD 667
PT + + + H V +++ LL + D IK W+ + S +
Sbjct: 250 VASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKIKFWNTHTGACLNSVE 309
Query: 668 SSYPVTSVLFNDTAEKILSSG--VDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAY 841
+ V S+L++ + ++LSS N + +W + ++ GHT V ++ S DG
Sbjct: 310 TGSQVCSLLWSKSERELLSSHGFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCT 369
Query: 842 LLSING 859
+ S G
Sbjct: 370 VASAAG 375
Score = 48.4 bits (110), Expect = 7e-06
Identities = 31/139 (22%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Frame = +2
Query: 362 ILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 538
+ +W+ G ++ + G + + ++ DG L G ++ V +WD + +++ L+
Sbjct: 114 VYLWDASSGSTYKLVTIDEEEGPVTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQVRTLR 173
Query: 539 -GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS--FDSSYPVTSVLFNDTA 709
GH + V S++ +L + D I D R R+ + + V + ++++
Sbjct: 174 GGHESRVGSLAW---NNHILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWSESG 230
Query: 710 EKILSSGVDNVIKMWDIRN 766
+K+ S G DNV+ +WD R+
Sbjct: 231 KKLASGGNDNVVHIWDHRS 249
Score = 40.7 bits (91), Expect = 0.001
Identities = 47/204 (23%), Positives = 84/204 (41%), Gaps = 13/204 (6%)
Frame = +2
Query: 188 HEISVVGTREKAVVTSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQIL 367
+ I G + +V + V S++ + GH E+ K+ GK LAS G D +
Sbjct: 187 NHILTTGGMDGKIVNNDVRIRSSIVETYL---GHTEEVCGLKWSESGKKLASGGNDNVVH 243
Query: 368 IWNVYGQCEN------VMVMKGHTGAIMQLCFSP-DGSHLYT--GATDNTVAVWDVPTGT 520
IW+ + + + HT A+ L + P S L T G D + W+ TG
Sbjct: 244 IWDHRSVASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKIKFWNTHTGA 303
Query: 521 RIKKLKGHANFVNSVSGARRGPELLVS-ASDDNTIKLWDARKRNPVASFDSSYPVTSVLF 697
+ ++ + V S+ ++ ELL S N + LW +A + + VLF
Sbjct: 304 CLNSVETGSQ-VCSLLWSKSERELLSSHGFTQNQLTLWKYPSMVKMAELNGH--TSRVLF 360
Query: 698 ---NDTAEKILSSGVDNVIKMWDI 760
+ + S+ D +++W++
Sbjct: 361 MAQSPDGCTVASAAGDETLRLWNV 384
Score = 33.5 bits (73), Expect = 0.20
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = +2
Query: 161 SLLPSKRVRHEISVVGTREKAVVTSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLA 340
SLL SK R +S G + + P + L GH + P+G +A
Sbjct: 316 SLLWSKSERELLSSHGFTQNQLTLWKYPSMVKMAE----LNGHTSRVLFMAQSPDGCTVA 371
Query: 341 SAGFDRQILIWNVYGQ 388
SA D + +WNV+G+
Sbjct: 372 SAAGDETLRLWNVFGE 387
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 57.6 bits (133), Expect = 1e-08
Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 6/202 (2%)
Frame = +2
Query: 263 APIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVY-GQCENVMVMKGHTGAIMQL 439
A + LEGH+ +I L S D +LIW+ GQC + ++ G+++
Sbjct: 178 AMVAALEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVRSINLQAEAGSLIS- 236
Query: 440 CFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNT 619
+G ++ G N V ++V + L+G V++++ A +L + + +
Sbjct: 237 ----EGPWVFLGLP-NAVKAFNVQNSKDVH-LEGVVGQVHAMTAANG---MLFAGTSSGS 287
Query: 620 IKLWDAR--KRNP---VASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLK 784
I +W A + +P + S + + F E + S VD IK+WD+ Q +
Sbjct: 288 ILVWKATDSESDPFKYLTSLEGHHSGEVTCFVVGGEVLYSGSVDKTIKVWDLNTLQCRMT 347
Query: 785 IKGHTDTVTGLSLSWDGAYLLS 850
+K H TVT L L WD + S
Sbjct: 348 LKQHIGTVTSL-LCWDKCLISS 368
Score = 47.2 bits (107), Expect = 2e-05
Identities = 27/72 (37%), Positives = 39/72 (54%)
Frame = +2
Query: 416 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 595
H+G + CF G LY+G+ D T+ VWD+ T LK H + +V+ + L
Sbjct: 311 HSGEVT--CFVVGGEVLYSGSVDKTIKVWDLNTLQCRMTLKQH---IGTVTSLLCWDKCL 365
Query: 596 VSASDDNTIKLW 631
+S+S D TIKLW
Sbjct: 366 ISSSLDGTIKLW 377
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/66 (19%), Positives = 29/66 (43%)
Frame = +2
Query: 371 WNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHAN 550
W+ + V ++GH I + L++ + D T+ +WD +G ++ + A
Sbjct: 171 WSCFPGLAMVAALEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVRSINLQAE 230
Query: 551 FVNSVS 568
+ +S
Sbjct: 231 AGSLIS 236
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 57.6 bits (133), Expect = 1e-08
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 11/187 (5%)
Frame = +2
Query: 233 SSVPRTSNLYAPIMLLEGHQGEIFTAKFHP--EGKHLASAGFDRQILIWNVYGQCENVM- 403
S P+TS P + L GH+ E + + EG +L S D++I +W+V + +
Sbjct: 151 SGKPQTSEC-DPDLRLMGHEQEGYGLAWSSFKEG-YLLSGSQDQRICLWDVSATATDKVL 208
Query: 404 ----VMKGHTGAIMQLCFSPDGSHLYTGATDNT-VAVWDVPTGTRIKKLKGHANFVNSVS 568
V +GH I + + +++ A D+ + +WD+ T ++K H +N +S
Sbjct: 209 NPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQMQHQVKVHEREINYLS 268
Query: 569 GARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY--PVTSVLFNDTAEKIL-SSGVDN 739
+L +AS D+T+ L+D RK S + V V ++ E +L SSG D
Sbjct: 269 FNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDR 328
Query: 740 VIKMWDI 760
+ +WDI
Sbjct: 329 RLMVWDI 335
Score = 35.9 bits (79), Expect = 0.037
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 8/107 (7%)
Frame = +2
Query: 530 KLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDA------RKRNPVASFDSSYPVTS- 688
+L GH ++ + L+S S D I LWD + NP+ ++ +
Sbjct: 164 RLMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIED 223
Query: 689 VLFNDTAEKIL-SSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLS 826
V ++ E I S+G D + +WD+R NQ+ ++K H + LS +
Sbjct: 224 VAWHMKNENIFGSAGDDCQLVIWDLRTNQMQHQVKVHEREINYLSFN 270
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 57.2 bits (132), Expect = 1e-08
Identities = 41/180 (22%), Positives = 85/180 (47%), Gaps = 5/180 (2%)
Frame = +2
Query: 332 HLASAGFDRQILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 508
+LA+A D+ I +W G+C + + +L +P+ L A + + ++D+
Sbjct: 12 YLATASHDQTIRLWQARTGRC--YFSFRYPDLHVNRLELTPEKGKL-VAACNPHIRLFDL 68
Query: 509 PTGTR---IKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP 679
+ ++ H V +V G ++ S S+D ++K+WD R R F S P
Sbjct: 69 RSYNPHIPVRNFVSHTKNVMAVGFQYTG-HMMYSGSEDGSVKIWDLRVRECQREFRSVSP 127
Query: 680 VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDT-VTGLSLSWDGAYLLSIN 856
V +V+ + +++S + I++WD+R + ++ T + L++ WDG +++ N
Sbjct: 128 VNTVVLHPNQTELISGDQNGNIRVWDLRADLCSCELVPEVGTPIRSLTVMWDGTMVVAAN 187
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/100 (29%), Positives = 47/100 (47%)
Frame = +2
Query: 245 RTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTG 424
+T + P+ L+ H I P K+LA+A D+ + IWN+ G + V+ GH
Sbjct: 202 QTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDG-FKLEKVLTGHER 260
Query: 425 AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 544
+ FS DG +L T ++D T +W + G + H
Sbjct: 261 WVWDCDFSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAH 300
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/78 (33%), Positives = 40/78 (51%)
Frame = +2
Query: 407 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 586
++ H I++ SP +L T ++D TV +W++ K L GH +V + G
Sbjct: 213 LQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDG- 271
Query: 587 ELLVSASDDNTIKLWDAR 640
E LV+AS D T +LW R
Sbjct: 272 EYLVTASSDTTARLWSMR 289
Score = 44.4 bits (100), Expect = 1e-04
Identities = 40/217 (18%), Positives = 88/217 (40%), Gaps = 10/217 (4%)
Frame = +2
Query: 245 RTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNV-YGQCENVMVMKGHT 421
R+ N + P+ H + F G + S D + IW++ +C+
Sbjct: 69 RSYNPHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREFRSVSPV 128
Query: 422 GAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANF-VNSVSGARRGPELLV 598
++ P+ + L +G + + VWD+ +L + S++ G ++V
Sbjct: 129 NTVV---LHPNQTELISGDQNGNIRVWDLRADLCSCELVPEVGTPIRSLTVMWDGT-MVV 184
Query: 599 SASDDNTIKLWDAR-KRNPVASFDSSYP-------VTSVLFNDTAEKILSSGVDNVIKMW 754
+A+D T +W + +R + F+ + + L + + + ++ D +K+W
Sbjct: 185 AANDRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDKTVKIW 244
Query: 755 DIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLSINGYT 865
++ ++ + GH V S DG YL++ + T
Sbjct: 245 NLDGFKLEKVLTGHERWVWDCDFSMDGEYLVTASSDT 281
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 56.8 bits (131), Expect = 2e-08
Identities = 35/144 (24%), Positives = 69/144 (47%)
Frame = +2
Query: 158 ASLLPSKRVRHEISVVGTREKAVVTSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHL 337
ASL P ++ +++VG + ++ P T + L GH F + +HP+G
Sbjct: 283 ASLSPDGKL---LAIVGDNPEGLIVD--PNTGKT---LETLSGHLDFSFASAWHPDGVTF 334
Query: 338 ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG 517
++ D+ +W++ ++V V+KG+ GAI + ++ DG ++ + V V+DV G
Sbjct: 335 STGNQDKTCRVWDIRNLSQSVTVLKGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNG 394
Query: 518 TRIKKLKGHANFVNSVSGARRGPE 589
++ +F +SG P+
Sbjct: 395 YETEQ---EIDFFGEISGISFSPD 415
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 56.4 bits (130), Expect = 2e-08
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 12/197 (6%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEG-KHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPD 454
++GH+ + +P K + SA D I +W++ + V GH GA+ L S D
Sbjct: 52 MDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSR-RTVCQFPGHQGAVRGLTASTD 110
Query: 455 GSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFV---------NSVSGARRGPELLVSAS 607
G+ L + TD TV +W+VP + NF+ N+ E + A+
Sbjct: 111 GNVLVSCGTDCTVRLWNVPRPSLEDSSISSENFIEPSATYVWKNAFWAVDHQFEGDLFAT 170
Query: 608 DDNTIKLWDARKRNPVASFD-SSYPVTSVLFNDTAEKIL-SSGVDNVIKMWDIRNNQIXL 781
+ +W+ + PV SF + V SV FN +L +S D I ++D+R +
Sbjct: 171 AGAQLDIWNHNRSQPVQSFQWGTDSVISVRFNPGEPNLLATSASDRSITIYDLRLSSAAR 230
Query: 782 KIKGHTDTVTGLSLSWD 832
KI T T S++W+
Sbjct: 231 KIIMMTKT---NSIAWN 244
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +2
Query: 404 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 583
V K H A+M + FSP G TG+ D +V ++ G +++ H + V +
Sbjct: 274 VHKDHVSAVMDIDFSPTGREFVTGSYDRSVRIFPY-NGGHSREIY-HTKRMQRVFCVKYS 331
Query: 584 PE--LLVSASDDNTIKLWDAR 640
+ ++S SDD ++LW A+
Sbjct: 332 CDATYVISGSDDTNLRLWKAK 352
Score = 38.3 bits (85), Expect = 0.007
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 716 ILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
I S+ +D I++WDI + + + GH V GL+ S DG L+S
Sbjct: 72 IFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDGNVLVS 116
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/72 (18%), Positives = 30/72 (41%)
Frame = +2
Query: 287 HQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHL 466
H + F P G+ + +DR + I+ G + + + +S D +++
Sbjct: 278 HVSAVMDIDFSPTGREFVTGSYDRSVRIFPYNGGHSREIYHTKRMQRVFCVKYSCDATYV 337
Query: 467 YTGATDNTVAVW 502
+G+ D + +W
Sbjct: 338 ISGSDDTNLRLW 349
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 56.4 bits (130), Expect = 2e-08
Identities = 55/230 (23%), Positives = 93/230 (40%), Gaps = 15/230 (6%)
Frame = +2
Query: 206 GTREKAVVTSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYG 385
G R + +SS PI L++GH+ + +++ G L S D +W
Sbjct: 10 GLRFNQMKSSSHQTLETRMRPI-LMKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFA-D 67
Query: 386 QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK--GHANFVN 559
E + +GH+GA+ S D S L TG+ D T +WDV +G + K A V+
Sbjct: 68 NGERLGTYRGHSGAVWCCDISRDSSRLITGSADQTAKLWDVKSGKELFTFKFGAPARSVD 127
Query: 560 SVSG---ARRGPELLVSASDDNTIKLWDARKRNPVA-------SFDSSYPVTSVLFNDTA 709
G A + V S +K + V S D + ++
Sbjct: 128 FSVGDHLAVITTDHFVGTSSAIHVKRIAEDPEDQVGDSVLVLQSPDGKKKINRAVWGPLN 187
Query: 710 EKILSSGVDNVIKMWDIRNNQIXLKIK---GHTDTVTGLSLSWDGAYLLS 850
+ I+S G D I++WD ++ + GH + +T L + D ++ L+
Sbjct: 188 QTIVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLT 237
Score = 46.8 bits (106), Expect = 2e-05
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 18/191 (9%)
Frame = +2
Query: 269 IMLLEGHQGE--IFTAKFHPEGKHLASAGFDRQILIWNVY-GQCENVMVMK-GHTGAIMQ 436
+++L+ G+ I A + P + + S G D I IW+ G+ + GH AI
Sbjct: 166 VLVLQSPDGKKKINRAVWGPLNQTIVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITS 225
Query: 437 LCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDN 616
LC + D SH TG+ D T +WD+ T T IK VN+V+ + +++ D
Sbjct: 226 LCKAADDSHFLTGSHDKTAKLWDMRTLTLIKTYTTVVP-VNAVAMSPLLNHVVLGGGQDA 284
Query: 617 T-------------IKLWDARKRNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMW 754
+ K +D + + + P+ ++ F+ + S G D +++
Sbjct: 285 SAVTTTDHRAGKFEAKFYDTILQEEIGGVKGHFGPINALAFSPDGKSFSSGGEDGYVRLH 344
Query: 755 DIRNNQIXLKI 787
+N +KI
Sbjct: 345 HFDSNYFNIKI 355
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 56.4 bits (130), Expect = 2e-08
Identities = 35/141 (24%), Positives = 67/141 (47%), Gaps = 4/141 (2%)
Frame = +2
Query: 416 HTGAIMQLCFSPDGSHLY-TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 592
H + + ++P + T + D+TV +W + ++ K HA V + ++
Sbjct: 105 HAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGDV 164
Query: 593 LVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKIL-SSGVDNVIKMWDIRN 766
SAS D T+++WD R+ + + + S +N + IL +S VD +K+WD+R+
Sbjct: 165 FASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDVRS 224
Query: 767 NQIXLKI-KGHTDTVTGLSLS 826
++ L + GH V + S
Sbjct: 225 YRVPLAVLNGHGYAVRKVKFS 245
Score = 52.0 bits (119), Expect = 5e-07
Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 8/150 (5%)
Frame = +2
Query: 209 TREKAVVTSSVPRTSNLYA-----PIMLLEGHQGEIFTAKFHPE-GKHLASAGFDRQILI 370
TR + +TSS T L+A + + H ++ A ++P+ G ASA D + I
Sbjct: 117 TRRDSFLTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRI 176
Query: 371 WNVYGQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPT-GTRIKKLKGH 544
W+V + + M++ H I+ ++ D L T + D TV VWDV + + L GH
Sbjct: 177 WDVR-EPGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGH 235
Query: 545 ANFVNSVSGARRGPELLVSASDDNTIKLWD 634
V V + L+ S S D ++ LWD
Sbjct: 236 GYAVRKVKFSPHRRSLIASCSYDMSVCLWD 265
Score = 46.8 bits (106), Expect = 2e-05
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 6/142 (4%)
Frame = +2
Query: 425 AIMQLCFSPD-GSHLYTGATDNTVAVWDV---PTGTRIKKLKGHANFVNSVSGARRGPEL 592
A+ +C+S S L D +V ++D P I+ + HA V SV +
Sbjct: 62 AVYDVCWSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDS 121
Query: 593 LVSASDDNTIKLWDARKRNPVASF-DSSYPVTSVLFNDT-AEKILSSGVDNVIKMWDIRN 766
+++S D+T+KLW + V +F + +Y V ++N + S+ D +++WD+R
Sbjct: 122 FLTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVRE 181
Query: 767 NQIXLKIKGHTDTVTGLSLSWD 832
+ I H + LS W+
Sbjct: 182 PGSTMIIPAHDFEI--LSCDWN 201
Score = 41.5 bits (93), Expect = 7e-04
Identities = 27/123 (21%), Positives = 55/123 (44%), Gaps = 3/123 (2%)
Frame = +2
Query: 272 MLLEGHQGEIFTAKFHP-EGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFS 448
M++ H EI + ++ + LA++ D+ + +W+V + V+ GH A+ ++ FS
Sbjct: 186 MIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFS 245
Query: 449 PDGSHLYTGAT-DNTVAVWD-VPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 622
P L + D +V +WD + + + H F + + L+ S D +
Sbjct: 246 PHRRSLIASCSYDMSVCLWDYMVEDALVGRYDHHTEFAVGIDMSVLVEGLMASTGWDELV 305
Query: 623 KLW 631
+W
Sbjct: 306 YVW 308
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 56.0 bits (129), Expect = 3e-08
Identities = 53/203 (26%), Positives = 87/203 (42%), Gaps = 7/203 (3%)
Frame = +2
Query: 263 APIMLLEGHQGEIFTAKFHPEGKH-LASAGFDRQILIWNVY-GQCENVMVMKGHTGAIMQ 436
A + LEGH E+ PEG L S D + +W+ GQC + + + G+++
Sbjct: 122 AMVASLEGHNKELKGIAL-PEGSDKLFSVSIDGTLRVWDCNSGQCVHSINLDAEAGSLIS 180
Query: 437 LCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDN 616
+G ++ G N + ++V T + L+ A V V+ +L + +
Sbjct: 181 -----EGPWVFLGLP-NAIKAFNVQTSQDLH-LQA-AGVVGQVNAMTIANGMLFAGTSSG 232
Query: 617 TIKLWDAR---KRNPVASFDS--SYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXL 781
+I +W A + +P S + F + + S VD IKMWD+ Q +
Sbjct: 233 SILVWKATTDSESDPFKYLTSLEGHSGEVTCFAVGGQMLYSGSVDKTIKMWDLNTLQCIM 292
Query: 782 KIKGHTDTVTGLSLSWDGAYLLS 850
+K HT TVT L L WD + S
Sbjct: 293 TLKQHTGTVTSL-LCWDKCLISS 314
Score = 53.2 bits (122), Expect = 2e-07
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Frame = +2
Query: 362 ILIWNVYGQCEN-----VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRI 526
IL+W E+ + ++GH+G + CF+ G LY+G+ D T+ +WD+ T I
Sbjct: 234 ILVWKATTDSESDPFKYLTSLEGHSGEVT--CFAVGGQMLYSGSVDKTIKMWDLNTLQCI 291
Query: 527 KKLKGHANFVNSVSGARRGPELLVSASDDNTIKLW 631
LK H V S+ + L+S+S D TIK+W
Sbjct: 292 MTLKQHTGTVTSL---LCWDKCLISSSLDGTIKVW 323
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +2
Query: 302 FTAKFHPEGKHLASAGFDRQIL-IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGA 478
+ K+ +GK G Q L W+ + V ++GH + + L++ +
Sbjct: 93 WVCKYWKDGK--CKRGEQCQFLHSWSCFPGLAMVASLEGHNKELKGIALPEGSDKLFSVS 150
Query: 479 TDNTVAVWDVPTG 517
D T+ VWD +G
Sbjct: 151 IDGTLRVWDCNSG 163
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 55.2 bits (127), Expect = 6e-08
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 5/120 (4%)
Frame = +2
Query: 287 HQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVM--VMKG---HTGAIMQLCFSP 451
H + T +F P G+ LAS ++ IW ++ N V K H ++ L +SP
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSP 122
Query: 452 DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLW 631
D ++L +G+ DN+ +WDV G+ + L H ++V V+ + + S S D T +++
Sbjct: 123 DDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLA-KYVASLSSDRTCRIY 181
Score = 35.1 bits (77), Expect = 0.065
Identities = 36/156 (23%), Positives = 62/156 (39%), Gaps = 17/156 (10%)
Frame = +2
Query: 416 HTGA-IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG---------HANFVNSV 565
H G ++ + F P L T D + +W + +G KK+ H VN++
Sbjct: 11 HDGKPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTI 70
Query: 566 SGARRGPELLVSASDDNTIKLWDARKRNPVASF----DSSYPVTSVL---FNDTAEKILS 724
+ G ELL S +D + +W S+ S+ VL ++ ++S
Sbjct: 71 RFSPSG-ELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLIS 129
Query: 725 SGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWD 832
VDN +WD+ + + H V G ++WD
Sbjct: 130 GSVDNSCIIWDVNKGSVHQILDAHCHYVQG--VAWD 163
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 55.2 bits (127), Expect = 6e-08
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 5/120 (4%)
Frame = +2
Query: 287 HQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVM--VMKG---HTGAIMQLCFSP 451
H + T +F P G+ LAS ++ IW ++ N V K H ++ L +SP
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSP 122
Query: 452 DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLW 631
D ++L +G+ DN+ +WDV G+ + L H ++V V+ + + S S D T +++
Sbjct: 123 DDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLA-KYVASLSSDRTCRIY 181
Score = 35.1 bits (77), Expect = 0.065
Identities = 36/156 (23%), Positives = 62/156 (39%), Gaps = 17/156 (10%)
Frame = +2
Query: 416 HTGA-IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG---------HANFVNSV 565
H G ++ + F P L T D + +W + +G KK+ H VN++
Sbjct: 11 HDGKPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTI 70
Query: 566 SGARRGPELLVSASDDNTIKLWDARKRNPVASF----DSSYPVTSVL---FNDTAEKILS 724
+ G ELL S +D + +W S+ S+ VL ++ ++S
Sbjct: 71 RFSPSG-ELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLIS 129
Query: 725 SGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWD 832
VDN +WD+ + + H V G ++WD
Sbjct: 130 GSVDNSCIIWDVNKGSVHQILDAHCHYVQG--VAWD 163
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 55.2 bits (127), Expect = 6e-08
Identities = 44/174 (25%), Positives = 81/174 (46%), Gaps = 9/174 (5%)
Frame = +2
Query: 356 RQILIWNVYGQCENVM--VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIK 529
R +W++ N+ + +T A+ ++ +SPDG L + + V ++ G ++
Sbjct: 396 RSFKVWDLATCTVNLQASLASEYTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGEDLR 455
Query: 530 ---KLKGHANFVNSVSGARRGPEL-LVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVL 694
++ HA VN ++ ++ +L +V+ +D TIK+WDA N + +F+ PV SV
Sbjct: 456 NHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVC 515
Query: 695 --FNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
+ + I S+ VD IK W N + + T ++ DG L S
Sbjct: 516 PHQKENIQFIFSTAVDGKIKAWLYDNMGSRVDYDAPGRSCTSMAYCADGTRLFS 569
Score = 47.6 bits (108), Expect = 1e-05
Identities = 43/153 (28%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Frame = +2
Query: 203 VGTREKAV-----VTSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQIL 367
VG+REK V V T NL A L + + + P+G L A +
Sbjct: 387 VGSREKLVSRSFKVWDLATCTVNLQAS--LASEYTAAVNRVVWSPDGGLLGVAYSKHIVH 444
Query: 368 IWNVYG--QCENVMVMKGHTGAIMQLCFSPDGSHL--YTGATDNTVAVWDVPTGTRIKKL 535
I++ +G N + + H G + L FS L T D T+ VWD TG ++
Sbjct: 445 IYSYHGGEDLRNHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTF 504
Query: 536 KGHANFVNSV-SGARRGPELLVSASDDNTIKLW 631
+GH V SV + + + S + D IK W
Sbjct: 505 EGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW 537
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/79 (27%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +2
Query: 596 VSASDDNTIKLWDARKRNPVASFDSSYPV-TSVLFNDTAEKILSSGVDNV-IKMWDIRNN 769
V ++ I L++ + +F + P TS+ F+ I++ G+D+ I+++++R +
Sbjct: 860 VMSASGGKISLFNMMTFKTMTTFMAPPPAATSLAFHPQDNNIIAIGMDDSSIQIYNVRVD 919
Query: 770 QIXLKIKGHTDTVTGLSLS 826
++ K+KGH VTGL+ S
Sbjct: 920 EVKSKLKGHQKRVTGLAFS 938
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +2
Query: 425 AIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVS 601
A L F P D + + G D+++ +++V KLKGH V ++ + +LVS
Sbjct: 888 AATSLAFHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFS-NVLNVLVS 946
Query: 602 ASDDNTIKLW 631
+ D+ + +W
Sbjct: 947 SGADSQLCVW 956
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 55.2 bits (127), Expect = 6e-08
Identities = 44/174 (25%), Positives = 81/174 (46%), Gaps = 9/174 (5%)
Frame = +2
Query: 356 RQILIWNVYGQCENVM--VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIK 529
R +W++ N+ + +T A+ ++ +SPDG L + + V ++ G ++
Sbjct: 396 RSFKVWDLATCTVNLQASLASEYTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGEDLR 455
Query: 530 ---KLKGHANFVNSVSGARRGPEL-LVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVL 694
++ HA VN ++ ++ +L +V+ +D TIK+WDA N + +F+ PV SV
Sbjct: 456 NHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVC 515
Query: 695 --FNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
+ + I S+ VD IK W N + + T ++ DG L S
Sbjct: 516 PHQKENIQFIFSTAVDGKIKAWLYDNMGSRVDYDAPGRSCTSMAYCADGTRLFS 569
Score = 47.6 bits (108), Expect = 1e-05
Identities = 43/153 (28%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Frame = +2
Query: 203 VGTREKAV-----VTSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQIL 367
VG+REK V V T NL A L + + + P+G L A +
Sbjct: 387 VGSREKLVSRSFKVWDLATCTVNLQAS--LASEYTAAVNRVVWSPDGGLLGVAYSKHIVH 444
Query: 368 IWNVYG--QCENVMVMKGHTGAIMQLCFSPDGSHL--YTGATDNTVAVWDVPTGTRIKKL 535
I++ +G N + + H G + L FS L T D T+ VWD TG ++
Sbjct: 445 IYSYHGGEDLRNHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTF 504
Query: 536 KGHANFVNSV-SGARRGPELLVSASDDNTIKLW 631
+GH V SV + + + S + D IK W
Sbjct: 505 EGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW 537
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/79 (27%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +2
Query: 596 VSASDDNTIKLWDARKRNPVASFDSSYPV-TSVLFNDTAEKILSSGVDNV-IKMWDIRNN 769
V ++ I L++ + +F + P TS+ F+ I++ G+D+ I+++++R +
Sbjct: 860 VMSASGGKISLFNMMTFKTMTTFMAPPPAATSLAFHPQDNNIIAIGMDDSSIQIYNVRVD 919
Query: 770 QIXLKIKGHTDTVTGLSLS 826
++ K+KGH VTGL+ S
Sbjct: 920 EVKSKLKGHQKRVTGLAFS 938
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +2
Query: 425 AIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVS 601
A L F P D + + G D+++ +++V KLKGH V ++ + +LVS
Sbjct: 888 AATSLAFHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFS-NVLNVLVS 946
Query: 602 ASDDNTIKLW 631
+ D+ + +W
Sbjct: 947 SGADSQLCVW 956
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 54.8 bits (126), Expect = 7e-08
Identities = 29/104 (27%), Positives = 51/104 (49%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDG 457
L+GH F + +HP G A+ D+ IW+ E+V V+KG+ GA+ + F+ DG
Sbjct: 315 LKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSDG 374
Query: 458 SHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 589
++ + V ++D +G K + +F +SG P+
Sbjct: 375 RYVAMAEPADFVHIYDTKSG---YKKEQEIDFFGEISGISFSPD 415
Score = 37.1 bits (82), Expect = 0.016
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Frame = +2
Query: 320 PEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAV 499
P+GK +A G D L+ + + + +KGH + P+G TG D T +
Sbjct: 287 PDGKLVAVVGDDPDGLLVDT-SNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRI 345
Query: 500 WDV-PTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDAR 640
WD + LKG+ V S+ G + A + + ++D +
Sbjct: 346 WDTRKLSESVAVLKGNLGAVRSIRFTSDG-RYVAMAEPADFVHIYDTK 392
Score = 34.7 bits (76), Expect = 0.086
Identities = 29/131 (22%), Positives = 52/131 (39%), Gaps = 2/131 (1%)
Frame = +2
Query: 446 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 625
SPDG + D + D G I LKGH ++ + S + + D T +
Sbjct: 286 SPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDY-SFASAWHPNGVTFATGNQDKTCR 344
Query: 626 LWDARK-RNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHT 799
+WD RK VA + V S+ F + + + + ++D ++ +
Sbjct: 345 IWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGYKKEQEIDFF 404
Query: 800 DTVTGLSLSWD 832
++G+S S D
Sbjct: 405 GEISGISFSPD 415
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 54.8 bits (126), Expect = 7e-08
Identities = 29/104 (27%), Positives = 51/104 (49%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDG 457
L+GH F + +HP G A+ D+ IW+ E+V V+KG+ GA+ + F+ DG
Sbjct: 309 LKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSDG 368
Query: 458 SHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 589
++ + V ++D +G K + +F +SG P+
Sbjct: 369 RYVAMAEPADFVHIYDTKSG---YKKEQEIDFFGEISGISFSPD 409
Score = 37.1 bits (82), Expect = 0.016
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Frame = +2
Query: 320 PEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAV 499
P+GK +A G D L+ + + + +KGH + P+G TG D T +
Sbjct: 281 PDGKLVAVVGDDPDGLLVDT-SNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRI 339
Query: 500 WDV-PTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDAR 640
WD + LKG+ V S+ G + A + + ++D +
Sbjct: 340 WDTRKLSESVAVLKGNLGAVRSIRFTSDG-RYVAMAEPADFVHIYDTK 386
Score = 34.7 bits (76), Expect = 0.086
Identities = 29/131 (22%), Positives = 52/131 (39%), Gaps = 2/131 (1%)
Frame = +2
Query: 446 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 625
SPDG + D + D G I LKGH ++ + S + + D T +
Sbjct: 280 SPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDY-SFASAWHPNGVTFATGNQDKTCR 338
Query: 626 LWDARK-RNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHT 799
+WD RK VA + V S+ F + + + + ++D ++ +
Sbjct: 339 IWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGYKKEQEIDFF 398
Query: 800 DTVTGLSLSWD 832
++G+S S D
Sbjct: 399 GEISGISFSPD 409
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 54.8 bits (126), Expect = 7e-08
Identities = 44/185 (23%), Positives = 80/185 (43%), Gaps = 10/185 (5%)
Frame = +2
Query: 335 LASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD--- 505
L + G D +I+ +V + + GHT + L +S G L +G DN V +WD
Sbjct: 208 LTTGGMDGKIVNNDVRIRSSIIGTYVGHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSL 267
Query: 506 ---VPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS--DDNTIKLWDARKRNPVASFDS 670
PT + + + H V +++ LL + D I W+ + S ++
Sbjct: 268 ASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKINFWNTHTGACLNSVET 327
Query: 671 SYPVTSVLFNDTAEKILSSG--VDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYL 844
V S+L++ + ++LS+ N + +W + ++ GHT V ++ S DG +
Sbjct: 328 GSQVCSLLWSKSERELLSAHGFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTV 387
Query: 845 LSING 859
S G
Sbjct: 388 ASAAG 392
Score = 46.4 bits (105), Expect = 3e-05
Identities = 30/136 (22%), Positives = 63/136 (46%), Gaps = 4/136 (2%)
Frame = +2
Query: 362 ILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 538
+ +W+ ++ + G + + ++ DG L G ++ V VWD + ++ L+
Sbjct: 132 VYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTLR 191
Query: 539 -GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS--FDSSYPVTSVLFNDTA 709
GH + V S++ +L + D I D R R+ + + V + ++++
Sbjct: 192 GGHESRVGSLAW---NNHILTTGGMDGKIVNNDVRIRSSIIGTYVGHTEEVCGLKWSESG 248
Query: 710 EKILSSGVDNVIKMWD 757
+K+ S G DNV+ +WD
Sbjct: 249 KKLASGGNDNVVHIWD 264
Score = 40.3 bits (90), Expect = 0.002
Identities = 47/203 (23%), Positives = 83/203 (40%), Gaps = 12/203 (5%)
Frame = +2
Query: 188 HEISVVGTREKAVVTSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQIL 367
+ I G + +V + V S++ + GH E+ K+ GK LAS G D +
Sbjct: 205 NHILTTGGMDGKIVNNDVRIRSSIIGTYV---GHTEEVCGLKWSESGKKLASGGNDNVVH 261
Query: 368 IWNVYGQCEN-----VMVMKGHTGAIMQLCFSP-DGSHLYT--GATDNTVAVWDVPTGTR 523
IW+ N + + HT A+ L + P S L T G D + W+ TG
Sbjct: 262 IWDRSLASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKINFWNTHTGAC 321
Query: 524 IKKLKGHANFVNSVSGARRGPELL-VSASDDNTIKLWDARKRNPVASFDSSYPVTSVLF- 697
+ ++ + V S+ ++ ELL N + LW +A + + VLF
Sbjct: 322 LNSVETGSQ-VCSLLWSKSERELLSAHGFTQNQLTLWKYPSMVKMAELNGH--TSRVLFM 378
Query: 698 --NDTAEKILSSGVDNVIKMWDI 760
+ + S+ D +++W++
Sbjct: 379 AQSPDGCTVASAAGDETLRLWNV 401
Score = 35.1 bits (77), Expect = 0.065
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Frame = +2
Query: 587 ELLVSASDDNTIKLWDARK---RNPVASFDSSYPVTSVLFNDTAEKI-LSSGVDN-VIKM 751
E +V +T+ LWDA V D + PVTS+ N T + + L+ G+DN +++
Sbjct: 121 EYIVIEQLGDTVYLWDASSCYTSKLVTIDDENGPVTSI--NWTQDGLDLAVGLDNSEVQV 178
Query: 752 WDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLSING 859
WD +N+ ++G ++ G SL+W+ ++L+ G
Sbjct: 179 WDCVSNRHVRTLRGGHESRVG-SLAWNN-HILTTGG 212
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = +2
Query: 161 SLLPSKRVRHEISVVGTREKAVVTSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLA 340
SLL SK R +S G + + P + L GH + P+G +A
Sbjct: 333 SLLWSKSERELLSAHGFTQNQLTLWKYPSMVKMAE----LNGHTSRVLFMAQSPDGCTVA 388
Query: 341 SAGFDRQILIWNVYGQ 388
SA D + +WNV+G+
Sbjct: 389 SAAGDETLRLWNVFGE 404
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 54.8 bits (126), Expect = 7e-08
Identities = 51/189 (26%), Positives = 92/189 (48%), Gaps = 14/189 (7%)
Frame = +2
Query: 335 LASAGFDRQILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSH-LYTGATDNTVAVWDV 508
LASA D+++ +W+V G C+ + M+ HT + + ++ L +G+ D TV + D
Sbjct: 249 LASASADKKVKVWDVATGTCK--ITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVLKDG 306
Query: 509 PTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDS-SYPV- 682
+ + V S++ V + +D T+K +D R+ + AS + S+ +
Sbjct: 307 RQPSHSGFKWSVMSDVESLAWDPHSEHSFVVSLEDGTVKGFDVRQASISASESNPSFTIN 366
Query: 683 ------TSVLFNDTAEKILSSGV-DNVIKMWDIRNNQIXLKIKGHTDTVTGL---SLSWD 832
TSV +N +A +L++G D +K+WD+ NN+ I H GL + S D
Sbjct: 367 GHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSC-IATHNPNAGGLFFIAFSPD 425
Query: 833 GAYLLSING 859
+LL++ G
Sbjct: 426 NPFLLAMGG 434
Score = 53.2 bits (122), Expect = 2e-07
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 10/155 (6%)
Frame = +2
Query: 416 HTGAIMQLCFSPDGSHLYTGAT-DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 592
HT +++ L ++ + ++ A+ D V VWDV TGT ++ H V +V+ PE+
Sbjct: 232 HTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEV 291
Query: 593 LVSASDDNTIKLWDARKRNPVA-SFDSSYPVTSVLFNDTAE-KILSSGVDNVIKMWDIRN 766
L+S S D T+ L D R+ + + V S+ ++ +E + S D +K +D+R
Sbjct: 292 LLSGSFDQTVVLKDGRQPSHSGFKWSVMSDVESLAWDPHSEHSFVVSLEDGTVKGFDVRQ 351
Query: 767 NQI-------XLKIKGHTDTVTGLSLSWDGAYLLS 850
I I GH + T +S + LL+
Sbjct: 352 ASISASESNPSFTINGHDEAATSVSYNISAPNLLA 386
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Frame = +2
Query: 533 LKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNP--VASFD-SSYPVTSVLFN- 700
+ GH SVS P LL + S D T+KLWD P +A+ + ++ + + F+
Sbjct: 365 INGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIAFSP 424
Query: 701 DTAEKILSSGVDNVIKMWD 757
D + GV +K+WD
Sbjct: 425 DNPFLLAMGGVMGELKLWD 443
Score = 28.7 bits (61), Expect = 5.6
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Frame = +2
Query: 530 KLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD-ARKRNPVASFDSSYPVTSVLFNDT 706
K H V ++ + +L SAS D +K+WD A + + V +V +N
Sbjct: 228 KQGSHTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHY 287
Query: 707 AEKILSSG-VDNVIKMWDIR 763
A ++L SG D + + D R
Sbjct: 288 APEVLLSGSFDQTVVLKDGR 307
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 54.8 bits (126), Expect = 7e-08
Identities = 37/162 (22%), Positives = 75/162 (46%), Gaps = 3/162 (1%)
Frame = +2
Query: 194 ISVVGTREKAVVTSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIW 373
+++VG ++++ P T A L GH F + +HP+G ++ D+ +W
Sbjct: 290 LTIVGDNPESLLVD--PNTGKTLAT---LSGHLDFSFASAWHPDGFTFSTGNQDKTCRVW 344
Query: 374 NVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANF 553
++ ++V V++G+ GAI + ++ DG ++ + V V+DV G ++ +F
Sbjct: 345 DIRNLSKSVAVLRGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQ---EIDF 401
Query: 554 VNSVSGARRGPE---LLVSASDDNTIKLWDARKRNPVASFDS 670
+SG P+ L + D L + +R+ + DS
Sbjct: 402 FGEISGISFSPDTEALFIGVWDRTYGSLIEYSRRHNYSYLDS 443
Score = 29.9 bits (64), Expect = 2.4
Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 3/132 (2%)
Frame = +2
Query: 446 SPDGSHLYTGATDNTVAVW-DVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 622
SPDG L T DN ++ D TG + L GH +F + S + + D T
Sbjct: 284 SPDGK-LLTIVGDNPESLLVDPNTGKTLATLSGHLDF-SFASAWHPDGFTFSTGNQDKTC 341
Query: 623 KLWDARK-RNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGH 796
++WD R VA + + S+ + + + + + + ++D+ N +
Sbjct: 342 RVWDIRNLSKSVAVLRGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQEIDF 401
Query: 797 TDTVTGLSLSWD 832
++G+S S D
Sbjct: 402 FGEISGISFSPD 413
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 54.8 bits (126), Expect = 7e-08
Identities = 36/136 (26%), Positives = 60/136 (44%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFS 448
I L GH+ F + +HP G LA+ D +W++ E+ V+KG+ GAI L F+
Sbjct: 283 ISSLRGHKDYSFASAWHPNGLILATGNQDTACRLWDIRNPSESFAVLKGNMGAIRGLKFT 342
Query: 449 PDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKL 628
P+G L + V ++D +G + + +S + L V +D L
Sbjct: 343 PEGRFLAMAEPADFVHIFDTQSGFLQSQEIDLFGEIAGISFSPDTEALYVGVADRTYGSL 402
Query: 629 WDARKRNPVASFDSSY 676
+ ++R DS Y
Sbjct: 403 LEYKRRKDNHYMDSFY 418
Score = 37.5 bits (83), Expect = 0.012
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 3/135 (2%)
Frame = +2
Query: 449 PDGS-HLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 625
P GS L T D + V+D + TR+ + + VN+ S + G +LL D
Sbjct: 216 PSGSLRLITANNDCKIRVFDAQSFTRVSEFALDWS-VNNTSVSPDG-KLLAVVGDSTECL 273
Query: 626 LWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSG-VDNVIKMWDIRN-NQIXLKIKGHT 799
+ D+ ++S + IL++G D ++WDIRN ++ +KG+
Sbjct: 274 ISDSHSGKVISSLRGHKDYSFASAWHPNGLILATGNQDTACRLWDIRNPSESFAVLKGNM 333
Query: 800 DTVTGLSLSWDGAYL 844
+ GL + +G +L
Sbjct: 334 GAIRGLKFTPEGRFL 348
Score = 34.7 bits (76), Expect = 0.086
Identities = 22/73 (30%), Positives = 32/73 (43%)
Frame = +2
Query: 446 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 625
SPDG L + D +G I L+GH ++ + S +L + + D +
Sbjct: 257 SPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKDY-SFASAWHPNGLILATGNQDTACR 315
Query: 626 LWDARKRNPVASF 664
LWD RNP SF
Sbjct: 316 LWDI--RNPSESF 326
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 54.4 bits (125), Expect = 1e-07
Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 22/181 (12%)
Frame = +2
Query: 287 HQGEIFTAKFHPEGKHL-ASAGFDRQILIWN---------VYGQCENVMVMKGHTGAIMQ 436
H GE+ A++ P+ + A+ + ++ +++ + G C + ++GH+
Sbjct: 124 HDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSEGYG 183
Query: 437 LCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKL------KGHANFVNSVSGARRGPELL 595
L +S HL +G+ D + +WD+ + K L K H V V+ R L
Sbjct: 184 LSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDVAWHLRHEYLF 243
Query: 596 VSASDDNTIKLWDARK---RNPVASFDS-SYPVTSVLFNDTAEKILSSG-VDNVIKMWDI 760
S DD + +WD R PV S + S V + FN E ++++G D +K++D+
Sbjct: 244 GSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDL 303
Query: 761 R 763
R
Sbjct: 304 R 304
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Frame = +2
Query: 530 KLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD--ARKRNPVASFDSSYPVTSVLFND 703
KL+GH++ +S ++ L+S SDD I LWD A +N + + D
Sbjct: 173 KLRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVED 232
Query: 704 TA-----EKILSS-GVDNVIKMWDIRN 766
A E + S G D + +WD+R+
Sbjct: 233 VAWHLRHEYLFGSVGDDQYLLIWDLRS 259
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 54.4 bits (125), Expect = 1e-07
Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 2/136 (1%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFS 448
++ L GH+G IF + +G + S DR IW + Q V+ GH+ + C S
Sbjct: 228 MLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCIS 287
Query: 449 PDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP--ELLVSASDDNTI 622
S + T D T VW V GT+++ +K H + P LLV+A D+ I
Sbjct: 288 --DSLIVTAGEDCTCRVWGV-DGTQLEVIKEHIG--RGIWRCLYDPNSSLLVTAGFDSAI 342
Query: 623 KLWDARKRNPVASFDS 670
K+ R S D+
Sbjct: 343 KVHQLHNRGSETSLDA 358
Score = 42.7 bits (96), Expect = 3e-04
Identities = 32/158 (20%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Frame = +2
Query: 335 LASAGFDRQILIWNVYG-----------QCENVMVMKGHTGAIMQLCFSPDGSHLYTGAT 481
+AS +I++W G +++ + GH G+I ++ +S DGS + + +
Sbjct: 196 IASGTIFNEIIVWRAVGLDGDNVDHGHYSASHMLRLTGHEGSIFRIVWSLDGSKIVSVSD 255
Query: 482 DNTVAVWDVPTGTRIKKLKGHANFVNSVS--GARRGPELLVSASDDNTIKLWDA-RKRNP 652
D + +W++ + +++ G F +SV L+V+A +D T ++W +
Sbjct: 256 DRSARIWEIDS----QEVVGPVLFGHSVRVWDCCISDSLIVTAGEDCTCRVWGVDGTQLE 311
Query: 653 VASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRN 766
V + L++ + ++++G D+ IK+ + N
Sbjct: 312 VIKEHIGRGIWRCLYDPNSSLLVTAGFDSAIKVHQLHN 349
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 54.4 bits (125), Expect = 1e-07
Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 2/136 (1%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFS 448
++ L GH+G IF + +G + S DR IW + Q V+ GH+ + C S
Sbjct: 228 MLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCIS 287
Query: 449 PDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP--ELLVSASDDNTI 622
S + T D T VW V GT+++ +K H + P LLV+A D+ I
Sbjct: 288 --DSLIVTAGEDCTCRVWGV-DGTQLEVIKEHIG--RGIWRCLYDPNSSLLVTAGFDSAI 342
Query: 623 KLWDARKRNPVASFDS 670
K+ R S D+
Sbjct: 343 KVHQLHNRGSETSLDA 358
Score = 42.7 bits (96), Expect = 3e-04
Identities = 32/158 (20%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Frame = +2
Query: 335 LASAGFDRQILIWNVYG-----------QCENVMVMKGHTGAIMQLCFSPDGSHLYTGAT 481
+AS +I++W G +++ + GH G+I ++ +S DGS + + +
Sbjct: 196 IASGTIFNEIIVWRAVGLDGDNVDHGHYSASHMLRLTGHEGSIFRIVWSLDGSKIVSVSD 255
Query: 482 DNTVAVWDVPTGTRIKKLKGHANFVNSVS--GARRGPELLVSASDDNTIKLWDA-RKRNP 652
D + +W++ + +++ G F +SV L+V+A +D T ++W +
Sbjct: 256 DRSARIWEIDS----QEVVGPVLFGHSVRVWDCCISDSLIVTAGEDCTCRVWGVDGTQLE 311
Query: 653 VASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRN 766
V + L++ + ++++G D+ IK+ + N
Sbjct: 312 VIKEHIGRGIWRCLYDPNSSLLVTAGFDSAIKVHQLHN 349
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 54.0 bits (124), Expect = 1e-07
Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 11/206 (5%)
Frame = +2
Query: 275 LLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPD 454
L+ GH+ + + ++ L + G D +I+ +V + V GHT + L +S
Sbjct: 203 LIGGHESRVGSLAWN--NHILTTGGMDGKIVNNDVRIRSSIVGTYLGHTEEVCGLKWSES 260
Query: 455 GSHLYTGATDNTVAVWD-------VPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS-- 607
G L +G N V +WD PT + + + H V +++ LL +
Sbjct: 261 GKKLASGGNYNVVHIWDHRSVASSKPTRQWLHRFEEHTAAVRALAWCPFQATLLATGGGV 320
Query: 608 DDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSG--VDNVIKMWDIRNNQIXL 781
D IK W+ + S ++ V S+L++ ++LSS N + +W +
Sbjct: 321 GDGKIKFWNTHTGACLNSVETGSQVCSLLWSQRERELLSSHGFTQNQLTLWKYPSMSKMA 380
Query: 782 KIKGHTDTVTGLSLSWDGAYLLSING 859
++ GHT V ++ S +G + S G
Sbjct: 381 ELNGHTSRVLFMAQSPNGCTVASAAG 406
Score = 38.7 bits (86), Expect = 0.005
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Frame = +2
Query: 353 DRQILIWNVY-GQCENVMVMKGHTGA-IMQLCFSPDGSHLYT--GATDNTVAVWDVPTGT 520
D +I WN + G C N + TG+ + L +S L + G T N + +W P+ +
Sbjct: 322 DGKIKFWNTHTGACLNSV----ETGSQVCSLLWSQRERELLSSHGFTQNQLTLWKYPSMS 377
Query: 521 RIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD 634
++ +L GH + V ++ + G + +A D+N ++LW+
Sbjct: 378 KMAELNGHTSRVLFMAQSPNGCTVASAAGDEN-LRLWN 414
Score = 36.7 bits (81), Expect = 0.021
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Frame = +2
Query: 323 EGKHLASAGFDR-QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAV 499
E + L+S GF + Q+ +W Y + + GHT ++ + SP+G + + A D + +
Sbjct: 354 ERELLSSHGFTQNQLTLWK-YPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRL 412
Query: 500 WDV----PTGTRIKKLKGHANFVNSVSGAR 577
W+V P T+ K + + V+ R
Sbjct: 413 WNVFGEPPKTTKKAASKNYLELFSHVNSLR 442
Score = 36.3 bits (80), Expect = 0.028
Identities = 23/76 (30%), Positives = 34/76 (44%)
Frame = +2
Query: 161 SLLPSKRVRHEISVVGTREKAVVTSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLA 340
SLL S+R R +S G + + P S + L GH + P G +A
Sbjct: 347 SLLWSQRERELLSSHGFTQNQLTLWKYPSMSKMAE----LNGHTSRVLFMAQSPNGCTVA 402
Query: 341 SAGFDRQILIWNVYGQ 388
SA D + +WNV+G+
Sbjct: 403 SAAGDENLRLWNVFGE 418
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 54.0 bits (124), Expect = 1e-07
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 6/152 (3%)
Frame = +2
Query: 392 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGT-RIKKLKGHANFVNSVS 568
E V + GHT + + + P+ +Y+ + D++V WDV TG + G A +N+V
Sbjct: 263 EAVTSLVGHTQCVSSVVW-PEHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKA--LNTVD 319
Query: 569 GARRGPELLVSASDDNTIKLWDARKRN---PVASFDS-SYPVTSVLFNDTAE-KILSSGV 733
L+ + D +++WD RK PV F S S +++ ++ ++ +LS+
Sbjct: 320 VGGESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASY 379
Query: 734 DNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSW 829
D I +WD+R I H D V LS W
Sbjct: 380 DGKIMLWDLRTAWPLSVIDTHNDKV--LSADW 409
Score = 41.1 bits (92), Expect = 0.001
Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Frame = +2
Query: 368 IWNVYGQCENVMVMKGHTGAIMQLCF--SPDGSHLY--TGATDNTVAVW------DVPTG 517
+W+ G C +++ +GH+GAI + S D + T + D T+ ++ V +
Sbjct: 135 VWSSAGSCSHIL--EGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDST 192
Query: 518 TRI---KKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTS 688
T++ K L+GH V SVS + G ++ S+S D TI LW+ N S S V
Sbjct: 193 TKVRAYKILRGHKASVQSVSAQKSG-NMVCSSSWDCTINLWNT---NESTSEGESVSVKK 248
Query: 689 VLFNDTAEKILSSG 730
N+ AE+ S G
Sbjct: 249 RKGNNQAEESQSEG 262
Score = 40.3 bits (90), Expect = 0.002
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 6/164 (3%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDG 457
L GH + ++ PE + S+ +D + W+V +++ + G A+ + +
Sbjct: 268 LVGHT-QCVSSVVWPEHDVIYSSSWDHSVRRWDVETGKDSLNLFCGK--ALNTVDVGGES 324
Query: 458 SHLYT-GATDNTVAVWDVP---TGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 625
S L G +D + VWD T + + H++++++ + L+SAS D I
Sbjct: 325 SALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIM 384
Query: 626 LWDARKRNPVASFDSSYPVTSVLFND--TAEKILSSGVDNVIKM 751
LWD R P++ D+ VL D E ++S G D+ +++
Sbjct: 385 LWDLRTAWPLSVIDTHN--DKVLSADWWKGESVVSGGADSNLRI 426
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 54.0 bits (124), Expect = 1e-07
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 8/163 (4%)
Frame = +2
Query: 299 IFTAKFHPEGKHLASAGFDRQILIWNVYG-QCENV-----MVMKGHTGAIMQLCF-SPDG 457
+ + F P+ +H+A+AG ++I I++ E+V +V + + +C+ S
Sbjct: 719 VCSLSFDPDEEHIAAAGISKKIKIFDFNAFMNESVGVHYPLVEMVNKSKLSCVCWNSYIK 778
Query: 458 SHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDA 637
++L + D V +WD TG + H SV + P VS SDD ++KLW
Sbjct: 779 NYLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWSI 838
Query: 638 RKRNPVASFDSSYPVTSVLFNDTAEKILSSG-VDNVIKMWDIR 763
++ + + S V V F+ + +L+ G D + +D+R
Sbjct: 839 NEKRSLGTIWSPANVCCVQFSSYSNHLLAFGSADYKVYCYDLR 881
Score = 44.4 bits (100), Expect = 1e-04
Identities = 43/181 (23%), Positives = 73/181 (40%), Gaps = 10/181 (5%)
Frame = +2
Query: 332 HLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDV 508
+LAS +D + IW+ G + H + FSP D + +G+ D +V +W +
Sbjct: 780 YLASTDYDGVVQIWDA-GTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWSI 838
Query: 509 PTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK-RNPVASFDSSYPVT 685
+ + AN V V + LL S D + +D R + P +
Sbjct: 839 NEKRSLGTIWSPAN-VCCVQFSSYSNHLLAFGSADYKVYCYDLRYVKTPWCTLAGHEKAV 897
Query: 686 SVLFNDTAEKILSSGVDNVIKMWDIRNNQ--------IXLKIKGHTDTVTGLSLSWDGAY 841
S + +E I+S+ DN +K+W++ L KGHT+ + LS Y
Sbjct: 898 SYVKFMDSETIVSASTDNSLKLWNLNKTNSSGLSPGACSLTYKGHTNQKNFVGLSVLDGY 957
Query: 842 L 844
+
Sbjct: 958 I 958
Score = 37.1 bits (82), Expect = 0.016
Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 3/124 (2%)
Frame = +2
Query: 287 HQGEIFTAKFHP-EGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSH 463
HQ ++ F P + S D + +W++ + + +Q FS +H
Sbjct: 807 HQKRAWSVDFSPSDPTKFVSGSDDCSVKLWSINEKRSLGTIWSPANVCCVQ--FSSYSNH 864
Query: 464 LYT-GATDNTVAVWDVP-TGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDA 637
L G+ D V +D+ T L GH V+ V E +VSAS DN++KLW+
Sbjct: 865 LLAFGSADYKVYCYDLRYVKTPWCTLAGHEKAVSYVKFM--DSETIVSASTDNSLKLWNL 922
Query: 638 RKRN 649
K N
Sbjct: 923 NKTN 926
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 53.6 bits (123), Expect = 2e-07
Identities = 53/187 (28%), Positives = 88/187 (47%), Gaps = 21/187 (11%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVY---GQCENVMVMKGHTGAIMQLCF- 445
++ H+G I++ KF +G++LASAG D I IW V + E + + K G+I
Sbjct: 359 IQAHKGSIWSIKFSLDGRYLASAGEDCVIQIWKVVESERKGELLSMDKQEDGSINLFLLA 418
Query: 446 --SPDG---SHLYTGATD--------NTVAVWDVPTGTRIK---KLKGHANFVNSVSGAR 577
SP+ S G T + V V + G K GH + V +S ++
Sbjct: 419 NGSPEPVSMSPKRRGRTSFSRKSVSLDNVLVPEAVFGLSEKPVCSFVGHLDDVLDLSWSK 478
Query: 578 RGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSG-VDNVIKMW 754
+ L+S+S D T++LWD + + F S VT + FN + SG +D +++W
Sbjct: 479 --SQHLLSSSMDKTVRLWDLSSKTCLKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRIW 536
Query: 755 DIRNNQI 775
I ++Q+
Sbjct: 537 SIPDHQV 543
Score = 43.6 bits (98), Expect = 2e-04
Identities = 31/146 (21%), Positives = 61/146 (41%), Gaps = 1/146 (0%)
Frame = +2
Query: 341 SAGFDRQILIWNVYGQCEN-VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG 517
S D ++ V+G E V GH ++ L +S HL + + D TV +WD+ +
Sbjct: 441 SVSLDNVLVPEAVFGLSEKPVCSFVGHLDDVLDLSWSKS-QHLLSSSMDKTVRLWDLSSK 499
Query: 518 TRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLF 697
T + K+ H+++V + +S S D +++W V D VT+ +
Sbjct: 500 TCL-KVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRIWSIPDHQVVDWNDLHEMVTAACY 558
Query: 698 NDTAEKILSSGVDNVIKMWDIRNNQI 775
+ L +++ +N++
Sbjct: 559 TPDGQGALVGSYKGTCCLYNTHDNKL 584
Score = 39.1 bits (87), Expect = 0.004
Identities = 26/122 (21%), Positives = 56/122 (45%), Gaps = 2/122 (1%)
Frame = +2
Query: 152 EDASLLPSKRVRHEISVVGTR-EKAVVTSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEG 328
E S+ P +R R S + +V +V S P+ GH ++ + +
Sbjct: 423 EPVSMSPKRRGRTSFSRKSVSLDNVLVPEAVFGLSE--KPVCSFVGHLDDVLDLSWS-KS 479
Query: 329 KHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWD 505
+HL S+ D+ + +W++ + + + H+ + + F+P D ++ +G+ D V +W
Sbjct: 480 QHLLSSSMDKTVRLWDL--SSKTCLKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRIWS 537
Query: 506 VP 511
+P
Sbjct: 538 IP 539
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 53.6 bits (123), Expect = 2e-07
Identities = 46/202 (22%), Positives = 87/202 (43%), Gaps = 10/202 (4%)
Frame = +2
Query: 284 GHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSH 463
GH+ + + + + L + G D +I+ +V + V GHT + L +S G+
Sbjct: 209 GHESRVGSLAW--DNHILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWSESGNK 266
Query: 464 LYTGATDNTVAVWD------VPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS--DDNT 619
+G DN V +WD T + + + H V +++ LL + D
Sbjct: 267 QASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGK 326
Query: 620 IKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSG--VDNVIKMWDIRNNQIXLKIKG 793
IK W+ + S ++ V S+L++ + ++LSS N + +W + ++ G
Sbjct: 327 IKFWNTHTGACLNSVETGSQVCSLLWSQSERELLSSHGFTQNQLTLWKYPSMSKMAELNG 386
Query: 794 HTDTVTGLSLSWDGAYLLSING 859
HT V ++ S +G + S G
Sbjct: 387 HTSRVLFMAQSPNGCTVASAAG 408
Score = 45.6 bits (103), Expect = 5e-05
Identities = 30/136 (22%), Positives = 63/136 (46%), Gaps = 4/136 (2%)
Frame = +2
Query: 362 ILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 538
+ +W+ G ++ + G + + ++ DG L G ++ V +WD + +++ L+
Sbjct: 148 VYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDCVSNRQVRTLR 207
Query: 539 -GHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS--FDSSYPVTSVLFNDTA 709
GH + V S++ +L + D I D R R+ + + V + ++++
Sbjct: 208 GGHESRVGSLAWDN---HILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWSESG 264
Query: 710 EKILSSGVDNVIKMWD 757
K S G DNV+ +WD
Sbjct: 265 NKQASGGNDNVVHIWD 280
Score = 39.5 bits (88), Expect = 0.003
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Frame = +2
Query: 353 DRQILIWNVY-GQCENVMVMKGHTGA-IMQLCFSPDGSHLYT--GATDNTVAVWDVPTGT 520
D +I WN + G C N + TG+ + L +S L + G T N + +W P+ +
Sbjct: 324 DGKIKFWNTHTGACLNSV----ETGSQVCSLLWSQSERELLSSHGFTQNQLTLWKYPSMS 379
Query: 521 RIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD 634
++ +L GH + V ++ + G + +A D+N ++LW+
Sbjct: 380 KMAELNGHTSRVLFMAQSPNGCTVASAAGDEN-LRLWN 416
Score = 36.3 bits (80), Expect = 0.028
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +2
Query: 323 EGKHLASAGFDR-QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAV 499
E + L+S GF + Q+ +W Y + + GHT ++ + SP+G + + A D + +
Sbjct: 356 ERELLSSHGFTQNQLTLWK-YPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRL 414
Query: 500 WDV 508
W+V
Sbjct: 415 WNV 417
Score = 33.9 bits (74), Expect = 0.15
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = +2
Query: 161 SLLPSKRVRHEISVVGTREKAVVTSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLA 340
SLL S+ R +S G + + P S + L GH + P G +A
Sbjct: 349 SLLWSQSERELLSSHGFTQNQLTLWKYPSMSKMAE----LNGHTSRVLFMAQSPNGCTVA 404
Query: 341 SAGFDRQILIWNVYGQ 388
SA D + +WNV+G+
Sbjct: 405 SAAGDENLRLWNVFGE 420
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 53.6 bits (123), Expect = 2e-07
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Frame = +2
Query: 308 AKFHPEGKHLASAGFDRQILIWNVYGQCEN-------VMVMKGHTGAIMQLCFSPDGSHL 466
A P G+ LA+A F + +W + Q + VM +KGH A+ LCFSP+ +
Sbjct: 245 AAVSPNGRFLAAAAFTADVKVWEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQI 304
Query: 467 YTGATDNTVAVWDV 508
T + D ++ VW++
Sbjct: 305 ITASKDGSIRVWNI 318
Score = 34.3 bits (75), Expect = 0.11
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 407 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 502
+KGH A+ LCFS DG L T D + V+
Sbjct: 82 LKGHGDAVTGLCFSSDGKSLATACADGVIRVF 113
Score = 32.7 bits (71), Expect = 0.35
Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 22/147 (14%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNV---YGQCENVMVMK--------- 412
+M L+GH+ + F P + + +A D I +WN+ Y E+ +K
Sbjct: 282 VMQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVWNINVRYHLDEDPKTLKVFPIPLCDS 341
Query: 413 -GHTGAIMQLCFSPDGSHLYTGATDNTVAVW-DVPTGTRIKKL-KGHANFVNSVSGA--- 574
G+ +L P+G L A+ + W TG + K H + +S A
Sbjct: 342 GGNPLHYDRLSLCPEGKIL--AASHGSTLQWLCAETGNVLDTAEKAHEGDITCISWAPKA 399
Query: 575 ----RRGPELLVSASDDNTIKLWDARK 643
R +L ++ DD +KLW+A K
Sbjct: 400 ITVGERHAMVLGTSGDDKKVKLWEAPK 426
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 53.6 bits (123), Expect = 2e-07
Identities = 27/80 (33%), Positives = 43/80 (53%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDG 457
LEGH F++ +HP G+ LA+ D +W+V +++ V+KG+ GAI L F+ DG
Sbjct: 315 LEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRALRFTSDG 374
Query: 458 SHLYTGATDNTVAVWDVPTG 517
L + V ++D G
Sbjct: 375 RFLAMAEPADFVHLFDTEAG 394
Score = 38.3 bits (85), Expect = 0.007
Identities = 31/136 (22%), Positives = 59/136 (43%), Gaps = 3/136 (2%)
Frame = +2
Query: 446 SPDGS-HLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 622
+P GS + T D TV ++D + + H + VN++S + G +L+ D
Sbjct: 244 APSGSLRVMTANNDCTVRLFDATNFALLNRFAFHWS-VNNISTSPDG-KLVAVLGDSPEC 301
Query: 623 KLWDARKRNPVASFDSSYPVT-SVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKI-KGH 796
L D + + + S ++ + + + D ++WD+RN LK+ KG+
Sbjct: 302 LLADTGSGKVIHGLEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGN 361
Query: 797 TDTVTGLSLSWDGAYL 844
+ L + DG +L
Sbjct: 362 MGAIRALRFTSDGRFL 377
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 53.2 bits (122), Expect = 2e-07
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 4/163 (2%)
Frame = +2
Query: 281 EGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGS 460
EGH+G ++++ ASA D +W+ +V+ H + FS D
Sbjct: 58 EGHKGAVWSSCLDNNALRAASASADFSAKLWDAL--TGDVLHSFEHKHIVRACAFSQDTK 115
Query: 461 HLYTGATDNTVAVWDV----PTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKL 628
+L TG + + V+D+ T I K G + + G + +L S +D ++L
Sbjct: 116 YLITGGFEKILRVFDLNRLDAPPTEIDKSPGSIRTLTWLHGDQT---ILSSCTDIGGVRL 172
Query: 629 WDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWD 757
WD R V + ++ PVTS + + +++ + +K WD
Sbjct: 173 WDVRSGKIVQTLETKSPVTSAEVSQDG-RYITTADGSTVKFWD 214
Score = 51.6 bits (118), Expect = 7e-07
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 3/123 (2%)
Frame = +2
Query: 401 MVMKGHTGAIMQLCFSP---DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 571
+V GH+ ++ L +SP DG L + + D+ + + TG I +GH V S S
Sbjct: 10 LVCHGHSRPVVDLFYSPITPDGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVWS-SC 68
Query: 572 ARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKM 751
SAS D + KLWDA + + SF+ + V + F+ + +++ G + ++++
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFSQDTKYLITGGFEKILRV 128
Query: 752 WDI 760
+D+
Sbjct: 129 FDL 131
Score = 48.0 bits (109), Expect = 9e-06
Identities = 38/172 (22%), Positives = 78/172 (45%), Gaps = 2/172 (1%)
Frame = +2
Query: 287 HQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHL 466
H+ + F + K+L + GF++ + ++++ + G+I L + +
Sbjct: 101 HKHIVRACAFSQDTKYLITGGFEKILRVFDLNRLDAPPTEIDKSPGSIRTLTWLHGDQTI 160
Query: 467 YTGATD-NTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK 643
+ TD V +WDV +G ++ L+ + V S ++ G ++ +D +T+K WDA
Sbjct: 161 LSSCTDIGGVRLWDVRSGKIVQTLETKSP-VTSAEVSQDGR--YITTADGSTVKFWDANH 217
Query: 644 RNPVASFDSSYPVTSV-LFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGH 796
V S+D + S L + K ++ G D ++++D + KGH
Sbjct: 218 FGLVKSYDMPCNIESASLEPKSGNKFVAGGEDMWVRLFDFHTGKEIGCNKGH 269
Score = 41.5 bits (93), Expect = 7e-04
Identities = 31/88 (35%), Positives = 40/88 (45%)
Frame = +2
Query: 455 GSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD 634
G+ G D V ++D TG I KGH V+ V A G E S S+D TI++W
Sbjct: 240 GNKFVAGGEDMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTG-ESYASGSEDGTIRIWQ 298
Query: 635 ARKRNPVASFDSSYPVTSVLFNDTAEKI 718
NP S P SV ++ A KI
Sbjct: 299 TGPVNP-EEISESKPKQSV--DEVARKI 323
Score = 33.1 bits (72), Expect = 0.26
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +2
Query: 299 IFTAKFHPE-GKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTG 475
I +A P+ G + G D + +++ + E + KGH G + + F+P G +G
Sbjct: 230 IESASLEPKSGNKFVAGGEDMWVRLFDFHTGKE-IGCNKGHHGPVHCVRFAPTGESYASG 288
Query: 476 ATDNTVAVW 502
+ D T+ +W
Sbjct: 289 SEDGTIRIW 297
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 281 EGHQGEIFTAKFHPEGKHLASAGFDRQILIW 373
+GH G + +F P G+ AS D I IW
Sbjct: 267 KGHHGPVHCVRFAPTGESYASGSEDGTIRIW 297
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 53.2 bits (122), Expect = 2e-07
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 23/214 (10%)
Frame = +2
Query: 287 HQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQ-----CENVMVMKG-HTGAIMQLCFS 448
H G I KF P+GK++ASAG D + +W++ + E V G + G +
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYEVAEVDSGVYFGMNQRSQIE 276
Query: 449 P---------DGSHLYTGATDNTVAVWDVPTGTRIK-----KLKGHANFVNSVSGARRGP 586
P S ++D+T V PT I + KGH + +S + +G
Sbjct: 277 PLKINNEKTEKKSSFLRKSSDSTCVVLP-PTIFSISEKPLHEFKGHIGEILDLSWSEKG- 334
Query: 587 ELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSG-VDNVIKMWDIR 763
L+S+S D T++LW + +F + VT V FN + SG +D +++WD+
Sbjct: 335 -YLLSSSVDETVRLWRVGCDECLRTFTHNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVT 393
Query: 764 NNQIXLKIKGHTDTVTGLSLSWD--GAYLLSING 859
++ + D VT + D GA + S+ G
Sbjct: 394 RCRV-VDYTDIRDIVTAVCYRPDAKGAVIGSMTG 426
Score = 51.6 bits (118), Expect = 7e-07
Identities = 33/124 (26%), Positives = 56/124 (45%)
Frame = +2
Query: 410 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 589
KGH G I+ L +S G +L + + D TV +W V ++ H NFV V+
Sbjct: 319 KGHIGEILDLSWSEKG-YLLSSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDN 376
Query: 590 LLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNN 769
+S S D +++WD + V D VT+V + A+ + + + + I N
Sbjct: 377 YFISGSIDGKVRIWDVTRCRVVDYTDIRDIVTAVCYRPDAKGAVIGSMTGNCRFYHIFEN 436
Query: 770 QIXL 781
Q+ +
Sbjct: 437 QLQM 440
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 53.2 bits (122), Expect = 2e-07
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 23/214 (10%)
Frame = +2
Query: 287 HQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQ-----CENVMVMKG-HTGAIMQLCFS 448
H G I KF P+GK++ASAG D + +W++ + E V G + G +
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYEVAEVDSGVYFGMNQRSQIE 276
Query: 449 P---------DGSHLYTGATDNTVAVWDVPTGTRIK-----KLKGHANFVNSVSGARRGP 586
P S ++D+T V PT I + KGH + +S + +G
Sbjct: 277 PLKINNEKTEKKSSFLRKSSDSTCVVLP-PTIFSISEKPLHEFKGHIGEILDLSWSEKG- 334
Query: 587 ELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSG-VDNVIKMWDIR 763
L+S+S D T++LW + +F + VT V FN + SG +D +++WD+
Sbjct: 335 -YLLSSSVDETVRLWRVGCDECLRTFTHNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVT 393
Query: 764 NNQIXLKIKGHTDTVTGLSLSWD--GAYLLSING 859
++ + D VT + D GA + S+ G
Sbjct: 394 RCRV-VDYTDIRDIVTAVCYRPDAKGAVIGSMTG 426
Score = 51.6 bits (118), Expect = 7e-07
Identities = 33/124 (26%), Positives = 56/124 (45%)
Frame = +2
Query: 410 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 589
KGH G I+ L +S G +L + + D TV +W V ++ H NFV V+
Sbjct: 319 KGHIGEILDLSWSEKG-YLLSSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDN 376
Query: 590 LLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNN 769
+S S D +++WD + V D VT+V + A+ + + + + I N
Sbjct: 377 YFISGSIDGKVRIWDVTRCRVVDYTDIRDIVTAVCYRPDAKGAVIGSMTGNCRFYHIFEN 436
Query: 770 QIXL 781
Q+ +
Sbjct: 437 QLQM 440
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 52.8 bits (121), Expect = 3e-07
Identities = 33/121 (27%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Frame = +2
Query: 275 LLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPD 454
+LE H+G I ++ P+ ASA +R+ ++W+ + + M H+ I L +SP+
Sbjct: 486 VLERHRGAISVIRYSPDLSMFASADLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPN 545
Query: 455 GSHLYTGATDNTVAVWDV--PTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKL 628
+ + TG+ D V V++V P +R+ H V + A +VS+ +D I++
Sbjct: 546 STMVATGSLDTCVIVYEVDKPASSRMTIKGAHLGGVYGLGFA--DDSHVVSSGEDACIRV 603
Query: 629 W 631
W
Sbjct: 604 W 604
Score = 48.0 bits (109), Expect = 9e-06
Identities = 36/183 (19%), Positives = 75/183 (40%), Gaps = 7/183 (3%)
Frame = +2
Query: 245 RTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNV----YGQCENVMVMK 412
+T + + +GH+G I+ + P+GK + + D+ IW++ G +
Sbjct: 217 KTCEILGELSSDDGHKGSIYAVSWSPDGKQVLTVSADKSAKIWDISDNGSGSLNTTLNCP 276
Query: 413 GHTGAIMQLCFSP--DGSHLYTGATDNTVAVWDVPTGTRIK-KLKGHANFVNSVSGARRG 583
G +G + + H+ T + T++++ + + GH V+S++ +
Sbjct: 277 GSSGGVDDMLVGCLWQNDHIVTVSLGGTISIFSASDLDKSPFQFSGHMKNVSSLAVLKGN 336
Query: 584 PELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIR 763
+ ++S S D I W R + F E+I++SG DN I +
Sbjct: 337 ADYILSGSYDGLICKW-MLGRGFCGKLQRTQNSQIKCFAAHEEEIVTSGYDNKISRISYK 395
Query: 764 NNQ 772
++Q
Sbjct: 396 DDQ 398
Score = 44.4 bits (100), Expect = 1e-04
Identities = 41/190 (21%), Positives = 81/190 (42%), Gaps = 7/190 (3%)
Frame = +2
Query: 308 AKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYT---GA 478
A++ P G+ +AS + IW Y K G I L +S DG + G
Sbjct: 62 ARYSPNGEWIASGDVSGTVRIWGAYNDHVLKNEFKVLAGRIDDLQWSADGMRIVASGDGK 121
Query: 479 TDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK-RNPV 655
+ V + +G+ + + GH+ V S + P +V+ +D + ++ + +
Sbjct: 122 GKSLVRAFMWDSGSNVGEFDGHSRRVLSCAIKPTRPFRIVTCGEDFLVNFYEGPPFKFKL 181
Query: 656 ASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIK---GHTDTVTGLSLS 826
+S + S V V F K ++ D ++D + +I ++ GH ++ +S S
Sbjct: 182 SSREHSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCEILGELSSDDGHKGSIYAVSWS 241
Query: 827 WDGAYLLSIN 856
DG +L+++
Sbjct: 242 PDGKQVLTVS 251
Score = 42.3 bits (95), Expect = 4e-04
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 12/168 (7%)
Frame = +2
Query: 287 HQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMK---GHTGAIMQLCFSPDG 457
H + +F P+G + D++ +I++ CE + + GH G+I + +SPDG
Sbjct: 186 HSNFVNCVRFAPDGSKFITVSSDKKGIIYDGK-TCEILGELSSDDGHKGSIYAVSWSPDG 244
Query: 458 SHLYTGATDNTVAVWDVP---TGTRIKKLK--GHANFVNS-VSGARRGPELLVSASDDNT 619
+ T + D + +WD+ +G+ L G + V+ + G + +V+ S T
Sbjct: 245 KQVLTVSADKSAKIWDISDNGSGSLNTTLNCPGSSGGVDDMLVGCLWQNDHIVTVSLGGT 304
Query: 620 IKLWDAR--KRNPVASFDSSYPVTSV-LFNDTAEKILSSGVDNVIKMW 754
I ++ A ++P V+S+ + A+ ILS D +I W
Sbjct: 305 ISIFSASDLDKSPFQFSGHMKNVSSLAVLKGNADYILSGSYDGLICKW 352
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 52.8 bits (121), Expect = 3e-07
Identities = 47/182 (25%), Positives = 87/182 (47%), Gaps = 16/182 (8%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVY-GQCENVMVMKGHTGAIMQLCFSPD 454
++ H G I++ KF +GK+LASAG D I IW V + + +++ ++ SP+
Sbjct: 409 IQAHNGSIWSIKFSLDGKYLASAGEDCIIHIWQVVEAEKKGELLLDRPELLLLATNGSPE 468
Query: 455 GSHL---YTGATD--------NTVAVWDVPTGTRIK---KLKGHANFVNSVSGARRGPEL 592
+ + G T + V D G K +GH + V ++ ++ +
Sbjct: 469 PTTMSPRRRGRTSISRKSLSLENIFVPDSLFGLSEKPFCSFQGHVDDVLDLAWSK--SQH 526
Query: 593 LVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSG-VDNVIKMWDIRNN 769
L+S+S D T++LW+ + + F S VT + FN ++ SG +D +++W I +
Sbjct: 527 LLSSSMDKTVRLWNLSSQTCLKVFSHSDYVTCIQFNPVDDRYFISGSLDAKVRVWSIPDR 586
Query: 770 QI 775
Q+
Sbjct: 587 QV 588
Score = 49.6 bits (113), Expect = 3e-06
Identities = 28/125 (22%), Positives = 56/125 (44%)
Frame = +2
Query: 410 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 589
+GH ++ L +S HL + + D TV +W++ + T +K H+++V +
Sbjct: 510 QGHVDDVLDLAWSKS-QHLLSSSMDKTVRLWNLSSQTCLKVFS-HSDYVTCIQFNPVDDR 567
Query: 590 LLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNN 769
+S S D +++W R V +D VTS + + +L +M+ +N
Sbjct: 568 YFISGSLDAKVRVWSIPDRQVVDWYDLHEMVTSACYTPDGQGVLVGSYKGSCRMYSASDN 627
Query: 770 QIXLK 784
++ K
Sbjct: 628 KLQQK 632
Score = 45.6 bits (103), Expect = 5e-05
Identities = 52/253 (20%), Positives = 105/253 (41%), Gaps = 13/253 (5%)
Frame = +2
Query: 131 IETKRKAEDASLLPSKRVRHEISVVG-TREKAVVTSSVPRTSNLYAPIMLLEGHQGEIFT 307
+ T E ++ P +R R IS + E V S+ S P +GH ++
Sbjct: 461 LATNGSPEPTTMSPRRRGRTSISRKSLSLENIFVPDSLFGLSE--KPFCSFQGHVDDVLD 518
Query: 308 AKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATD 484
+ + +HL S+ D+ + +WN+ Q + + H+ + + F+P D + +G+ D
Sbjct: 519 LAWS-KSQHLLSSSMDKTVRLWNLSSQ--TCLKVFSHSDYVTCIQFNPVDDRYFISGSLD 575
Query: 485 NTVAVWDVPTGTRIKKLKGHANFVNS---------VSGARRGPELLVSASDDNTIKLWDA 637
V VW +P + H ++ + G+ +G + SASD+ +
Sbjct: 576 AKVRVWSIPDRQVVDWYDLHEMVTSACYTPDGQGVLVGSYKGSCRMYSASDNKLQQKSQI 635
Query: 638 RKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKG--HTDTVT 811
+N ++ ++L + D+ I++ D + K+KG +T +
Sbjct: 636 NLQNKKKKAHQKKITGFQFVPGSSSEVLVTSSDSRIRVVD--GTDLVNKLKGFRNTSSQI 693
Query: 812 GLSLSWDGAYLLS 850
S++ DG Y++S
Sbjct: 694 SASITADGKYVVS 706
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 52.4 bits (120), Expect = 4e-07
Identities = 23/87 (26%), Positives = 49/87 (56%)
Frame = +2
Query: 590 LLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNN 769
L++SA +K+WD +KR + +D + ++++ + + D VI+++D+
Sbjct: 488 LMISAGYHGDLKVWDFKKRELKSQWDVGCSLVKIVYHRVNGLLATVADDFVIRLYDVVTL 547
Query: 770 QIXLKIKGHTDTVTGLSLSWDGAYLLS 850
++ + +GHTD +T L S DG +++S
Sbjct: 548 KMVREFRGHTDRITDLCFSEDGKWVIS 574
Score = 46.0 bits (104), Expect = 3e-05
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Frame = +2
Query: 314 FHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTV 493
+H LA+ D I +++V + V +GHT I LCFS DG + + + D ++
Sbjct: 523 YHRVNGLLATVADDFVIRLYDVV-TLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSL 581
Query: 494 AVWDVPTGTRIKKLKGHANF-VNSVSGARRGPELLVSASDDNTIKLW 631
+WDV +I + H + + ++S + L + SD N + LW
Sbjct: 582 RIWDVILAKQIDGV--HVDVPITALSLSPNMDVLATAHSDQNGVYLW 626
Score = 45.2 bits (102), Expect = 6e-05
Identities = 28/158 (17%), Positives = 73/158 (46%), Gaps = 2/158 (1%)
Frame = +2
Query: 287 HQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTG-AIMQLCFSPDGSH 463
H GE+ + SAG+ + +W+ + + + G +++++ +
Sbjct: 473 HDGEVIGVACDSTNTLMISAGYHGDLKVWDFK---KRELKSQWDVGCSLVKIVYHRVNGL 529
Query: 464 LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK 643
L T A D + ++DV T +++ +GH + + + + G + ++S+S D ++++WD
Sbjct: 530 LATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDG-KWVISSSMDGSLRIWDVIL 588
Query: 644 RNPVASFDSSYPVTSVLFNDTAEKILSSGVD-NVIKMW 754
+ P+T++ + + + ++ D N + +W
Sbjct: 589 AKQIDGVHVDVPITALSLSPNMDVLATAHSDQNGVYLW 626
Score = 37.9 bits (84), Expect = 0.009
Identities = 30/138 (21%), Positives = 59/138 (42%), Gaps = 4/138 (2%)
Frame = +2
Query: 368 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 547
+WN+ + + + KG ++ SP + G D + V ++ I + HA
Sbjct: 165 LWNINTK-KMLYQFKGWGSSVTSCVSSPALDVVAIGCADGKIHVHNIKLDEEIVTFE-HA 222
Query: 548 N--FVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEK-- 715
+ V ++S + G LL S I +W+ K+ + ++ + + N A +
Sbjct: 223 SRGAVTALSFSTDGRPLLASGGSFGVISIWNLNKKRLQSVIRDAHDSSIISLNFLANEPV 282
Query: 716 ILSSGVDNVIKMWDIRNN 769
++S+ DN +KMW N
Sbjct: 283 LMSASADNSLKMWIFDTN 300
Score = 33.9 bits (74), Expect = 0.15
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 5/119 (4%)
Frame = +2
Query: 290 QGEIFTAKFHPEGKHL-ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHL 466
+G + F +G+ L AS G I IWN+ + ++ H +I+ L F + L
Sbjct: 224 RGAVTALSFSTDGRPLLASGGSFGVISIWNLNKKRLQSVIRDAHDSSIISLNFLANEPVL 283
Query: 467 YTGATDNTVAVWDVPTGTRIKKL----KGHANFVNSVSGARRGPELLVSASDDNTIKLW 631
+ + DN++ +W T +L GH+ + G +L SA D +L+
Sbjct: 284 MSASADNSLKMWIFDTNDGDPRLLRFRSGHSAPPLCIRFYSNGRHIL-SAGQDRAFRLF 341
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +2
Query: 284 GHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGH 418
GH +F+ G+H+ SAG DR +++V + ++ + + H
Sbjct: 312 GHSAPPLCIRFYSNGRHILSAGQDRAFRLFSVIQEQQSRELSQRH 356
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 52.4 bits (120), Expect = 4e-07
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 7/136 (5%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYG-----QCENVMVMKGHTGAIM 433
+ +L+GH+G + FHP G+ LAS +L W + + V G +I+
Sbjct: 139 VRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQNGVVSFTLKGVAPDTGFNTSIV 198
Query: 434 QL-CFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG-HANFVNSVSGARRGPELLVSAS 607
+ +SPDG L N V ++D TG ++ L+G H + ++ A G + S
Sbjct: 199 NIPRWSPDGRTLAVPGLRNDVVMYDRFTGEKLFALRGDHLEAICYLTWAPNGKYIATSGL 258
Query: 608 DDNTIKLWDARKRNPV 655
D + LWD K+ +
Sbjct: 259 DKQVL-LWDVDKKQDI 273
Score = 50.4 bits (115), Expect = 2e-06
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 8/161 (4%)
Frame = +2
Query: 314 FHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTV 493
F+ G LA+AG D I + N + V V+KGH G + L F P+G L + T TV
Sbjct: 112 FNGSGSLLAAAGDDEGIKLINTFDG-SIVRVLKGHKGPVTGLDFHPNGELLASIDTTGTV 170
Query: 494 AVWDVPTGTRIKKLKGHA---NFVNSVSGARR-GPE--LLVSASDDNTIKLWDARKRNPV 655
W++ G LKG A F S+ R P+ L N + ++D +
Sbjct: 171 LCWELQNGVVSFTLKGVAPDTGFNTSIVNIPRWSPDGRTLAVPGLRNDVVMYDRFTGEKL 230
Query: 656 ASF--DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQ 772
+ D + + + + I +SG+D + +WD+ Q
Sbjct: 231 FALRGDHLEAICYLTWAPNGKYIATSGLDKQVLLWDVDKKQ 271
Score = 44.4 bits (100), Expect = 1e-04
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Frame = +2
Query: 413 GHTGAIMQLCFSPDGSHLYTGAT-DNTVAVWD-VPTGTRIKK-LKGHANFVNSVSGARRG 583
G + A + + H T ++ D +++V D + T T L+ H + V S++
Sbjct: 15 GGSAAFCSILWDHKAEHFVTSSSSDPSISVHDGLSTSTLPPTILRHHQDGVTSLA-LSND 73
Query: 584 PELLVSASDDNTIKLW---DARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 754
LL S S D+ +KL+ + + F + P+ + FN + + ++G D IK+
Sbjct: 74 STLLASGSIDHCVKLYKFPSGEFQTNITRF--TLPIRVLAFNGSGSLLAAAGDDEGIKLI 131
Query: 755 DIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLSIN 856
+ + I +KGH VTGL +G L SI+
Sbjct: 132 NTFDGSIVRVLKGHKGPVTGLDFHPNGELLASID 165
Score = 43.6 bits (98), Expect = 2e-04
Identities = 30/131 (22%), Positives = 57/131 (43%), Gaps = 1/131 (0%)
Frame = +2
Query: 404 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 583
+++ H + L S D + L +G+ D+ V ++ P+G + + ++ G
Sbjct: 57 ILRHHQDGVTSLALSNDSTLLASGSIDHCVKLYKFPSGEFQTNITRFTLPIRVLAFNGSG 116
Query: 584 PELLVSASDDNTIKLWDARKRNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWDI 760
LL +A DD IKL + + V PVT + F+ E + S + W++
Sbjct: 117 -SLLAAAGDDEGIKLINTFDGSIVRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWEL 175
Query: 761 RNNQIXLKIKG 793
+N + +KG
Sbjct: 176 QNGVVSFTLKG 186
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 52.4 bits (120), Expect = 4e-07
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 3/122 (2%)
Frame = +2
Query: 404 VMKGHTGAIMQLCFSP---DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 574
V GH+ ++ L +SP DG L + + D+ + + TG I +GH V S S
Sbjct: 11 VCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWS-SCL 69
Query: 575 RRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 754
SAS D + KLWDA + + SF+ + V + F++ + +L+ G + +++++
Sbjct: 70 DNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFSEDTKSLLTGGFEKILRVF 129
Query: 755 DI 760
D+
Sbjct: 130 DM 131
Score = 51.6 bits (118), Expect = 7e-07
Identities = 37/163 (22%), Positives = 70/163 (42%), Gaps = 4/163 (2%)
Frame = +2
Query: 281 EGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGS 460
EGH+G ++++ ASA D +W+ +V+ H + FS D
Sbjct: 58 EGHKGAVWSSCLDNNALRAASASADFSAKLWDAL--TGDVLHSFEHKHIVRACAFSEDTK 115
Query: 461 HLYTGATDNTVAVWDV----PTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKL 628
L TG + + V+D+ T + K G + +++ +L S +D ++L
Sbjct: 116 SLLTGGFEKILRVFDMNRLDAPPTEVDKSPGS---IRTLTWLHSDQTILSSCTDIGGVRL 172
Query: 629 WDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWD 757
WD R V + ++ PVTS + + +++ + +K WD
Sbjct: 173 WDVRSGKIVQTLETKSPVTSAEVSQDG-RYITTADGSTVKFWD 214
Score = 48.4 bits (110), Expect = 7e-06
Identities = 39/172 (22%), Positives = 78/172 (45%), Gaps = 2/172 (1%)
Frame = +2
Query: 287 HQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHL 466
H+ + F + K L + GF++ + ++++ + G+I L + +
Sbjct: 101 HKHIVRACAFSEDTKSLLTGGFEKILRVFDMNRLDAPPTEVDKSPGSIRTLTWLHSDQTI 160
Query: 467 YTGATD-NTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK 643
+ TD V +WDV +G ++ L+ + V S ++ G ++ +D +T+K WDA
Sbjct: 161 LSSCTDIGGVRLWDVRSGKIVQTLETKSP-VTSAEVSQDGR--YITTADGSTVKFWDANH 217
Query: 644 RNPVASFDSSYPVTSV-LFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGH 796
V S+D + S L + EK ++ G D ++++D + KGH
Sbjct: 218 FGLVKSYDMPCNIESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGH 269
Score = 37.9 bits (84), Expect = 0.009
Identities = 25/73 (34%), Positives = 31/73 (42%)
Frame = +2
Query: 455 GSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD 634
G G D V V+D TG I KGH V+ V G S S+D TI++W
Sbjct: 240 GEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSY-ASGSEDGTIRIWQ 298
Query: 635 ARKRNPVASFDSS 673
NP + SS
Sbjct: 299 TTPANPEENETSS 311
Score = 36.3 bits (80), Expect = 0.028
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 299 IFTAKFHPE-GKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTG 475
I +A P+ G+ + G D + +++ Y E + KGH G + + F+P G +G
Sbjct: 230 IESASLEPKSGEKFVAGGEDMWVRVFDFYTG-EEIGCNKGHHGPVHCVRFTPTGLSYASG 288
Query: 476 ATDNTVAVW 502
+ D T+ +W
Sbjct: 289 SEDGTIRIW 297
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 281 EGHQGEIFTAKFHPEGKHLASAGFDRQILIW 373
+GH G + +F P G AS D I IW
Sbjct: 267 KGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 52.4 bits (120), Expect = 4e-07
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 3/122 (2%)
Frame = +2
Query: 404 VMKGHTGAIMQLCFSP---DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 574
V GH+ ++ L +SP DG L + + D+ + + TG I +GH V S S
Sbjct: 11 VCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWS-SCL 69
Query: 575 RRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 754
SAS D + KLWDA + + SF+ + V + F++ + +L+ G + +++++
Sbjct: 70 DNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFSEDTKSLLTGGFEKILRVF 129
Query: 755 DI 760
D+
Sbjct: 130 DM 131
Score = 51.6 bits (118), Expect = 7e-07
Identities = 37/163 (22%), Positives = 70/163 (42%), Gaps = 4/163 (2%)
Frame = +2
Query: 281 EGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGS 460
EGH+G ++++ ASA D +W+ +V+ H + FS D
Sbjct: 58 EGHKGAVWSSCLDNNALRAASASADFSAKLWDAL--TGDVLHSFEHKHIVRACAFSEDTK 115
Query: 461 HLYTGATDNTVAVWDV----PTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKL 628
L TG + + V+D+ T + K G + +++ +L S +D ++L
Sbjct: 116 SLLTGGFEKILRVFDMNRLDAPPTEVDKSPGS---IRTLTWLHSDQTILSSCTDIGGVRL 172
Query: 629 WDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWD 757
WD R V + ++ PVTS + + +++ + +K WD
Sbjct: 173 WDVRSGKIVQTLETKSPVTSAEVSQDG-RYITTADGSTVKFWD 214
Score = 48.4 bits (110), Expect = 7e-06
Identities = 39/172 (22%), Positives = 78/172 (45%), Gaps = 2/172 (1%)
Frame = +2
Query: 287 HQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHL 466
H+ + F + K L + GF++ + ++++ + G+I L + +
Sbjct: 101 HKHIVRACAFSEDTKSLLTGGFEKILRVFDMNRLDAPPTEVDKSPGSIRTLTWLHSDQTI 160
Query: 467 YTGATD-NTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK 643
+ TD V +WDV +G ++ L+ + V S ++ G ++ +D +T+K WDA
Sbjct: 161 LSSCTDIGGVRLWDVRSGKIVQTLETKSP-VTSAEVSQDGR--YITTADGSTVKFWDANH 217
Query: 644 RNPVASFDSSYPVTSV-LFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGH 796
V S+D + S L + EK ++ G D ++++D + KGH
Sbjct: 218 FGLVKSYDMPCNIESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGH 269
Score = 37.9 bits (84), Expect = 0.009
Identities = 25/73 (34%), Positives = 31/73 (42%)
Frame = +2
Query: 455 GSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD 634
G G D V V+D TG I KGH V+ V G S S+D TI++W
Sbjct: 240 GEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSY-ASGSEDGTIRIWQ 298
Query: 635 ARKRNPVASFDSS 673
NP + SS
Sbjct: 299 TTPANPEENETSS 311
Score = 36.3 bits (80), Expect = 0.028
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 299 IFTAKFHPE-GKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTG 475
I +A P+ G+ + G D + +++ Y E + KGH G + + F+P G +G
Sbjct: 230 IESASLEPKSGEKFVAGGEDMWVRVFDFYTG-EEIGCNKGHHGPVHCVRFTPTGLSYASG 288
Query: 476 ATDNTVAVW 502
+ D T+ +W
Sbjct: 289 SEDGTIRIW 297
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 281 EGHQGEIFTAKFHPEGKHLASAGFDRQILIW 373
+GH G + +F P G AS D I IW
Sbjct: 267 KGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice sites
at introns 4 and 6
Length = 1017
Score = 52.0 bits (119), Expect = 5e-07
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Frame = +2
Query: 458 SHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDA 637
++L + D V +WDV TG I H SV + P L S SDD ++KLW+
Sbjct: 767 NYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNI 826
Query: 638 RKRNPVASFDSSYPVTSVLFNDTAEKILSSG-VDNVIKMWDIRNNQIXLKI-KGHTDTVT 811
+RN + + + V V F+ + +L+ G D +D+RN + I GH V+
Sbjct: 827 NERNCLGTIRNIANVCCVQFSPQSSHLLAFGSSDFRTYCYDLRNLRTPWCILSGHNKAVS 886
Score = 43.2 bits (97), Expect = 2e-04
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Frame = +2
Query: 335 LASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYT-GATDNTVAVWDVP 511
LAS D + +WN+ + N + + + + FSP SHL G++D +D+
Sbjct: 812 LASGSDDCSVKLWNINER--NCLGTIRNIANVCCVQFSPQSSHLLAFGSSDFRTYCYDLR 869
Query: 512 T-GTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK 643
T L GH V+ E LV+AS DNT+KLWD +K
Sbjct: 870 NLRTPWCILSGHNKAVSYAKFLDN--ETLVTASTDNTLKLWDLKK 912
Score = 42.7 bits (96), Expect = 3e-04
Identities = 45/183 (24%), Positives = 80/183 (43%), Gaps = 12/183 (6%)
Frame = +2
Query: 332 HLASAGFDRQILIWNVY-GQCENVMVMKGHTGAIMQLCFSPD-GSHLYTGATDNTVAVWD 505
+LAS+ +D + +W+V GQ + + H + FS + L +G+ D +V +W+
Sbjct: 768 YLASSDYDGIVKLWDVTTGQAISHFIE--HEKRAWSVDFSEACPTKLASGSDDCSVKLWN 825
Query: 506 VPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK-RNPVASFDS-SYP 679
+ + ++ AN V V + + LL S D +D R R P +
Sbjct: 826 INERNCLGTIRNIAN-VCCVQFSPQSSHLLAFGSSDFRTYCYDLRNLRTPWCILSGHNKA 884
Query: 680 VTSVLFNDTAEKILSSGVDNVIKMWDIR--------NNQIXLKIKGHTDTVTGLSLSWDG 835
V+ F D E ++++ DN +K+WD++ N L GHT+ + LS
Sbjct: 885 VSYAKFLDN-ETLVTASTDNTLKLWDLKKTTHGGLSTNACSLTFGGHTNEKNFVGLSTSD 943
Query: 836 AYL 844
Y+
Sbjct: 944 GYI 946
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +2
Query: 311 KFHPEGKHLASAGF-DRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDN 487
+F P+ HL + G D + +++ ++ GH A+ F D L T +TDN
Sbjct: 845 QFSPQSSHLLAFGSSDFRTYCYDLRNLRTPWCILSGHNKAVSYAKFL-DNETLVTASTDN 903
Query: 488 TVAVWDVPTGT 520
T+ +WD+ T
Sbjct: 904 TLKLWDLKKTT 914
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 51.6 bits (118), Expect = 7e-07
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 2/117 (1%)
Frame = +2
Query: 311 KFHPEGKHLASAGF-DRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDN 487
+F P G + G DR+ ++++ + + ++GHT + + F DG + T TD
Sbjct: 76 EFDPSGGPAVAVGCADRKGYVYDIRKLVDPALTLQGHTKTVSYVRFL-DGGTVVTAGTDG 134
Query: 488 TVAVWDVPTGTRIKKLKGHANFVNSVS-GARRGPELLVSASDDNTIKLWDARKRNPV 655
+ +W V G I+ +GH N N V R L S++N + ++D R PV
Sbjct: 135 CLKLWSVEDGRVIRTYEGHVNNRNFVGLSVWRNGALFGCGSENNRVFVYDRRWGKPV 191
Score = 31.9 bits (69), Expect = 0.60
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Frame = +2
Query: 581 GPELLVSASDDNTIKLWDARKR-NPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMW 754
GP + V +D ++D RK +P + + V+ V F D ++++G D +K+W
Sbjct: 82 GPAVAVGCADRKGY-VYDIRKLVDPALTLQGHTKTVSYVRFLDGGT-VVTAGTDGCLKLW 139
Query: 755 DIRNNQIXLKIKGHTD--TVTGLSLSWDGA 838
+ + ++ +GH + GLS+ +GA
Sbjct: 140 SVEDGRVIRTYEGHVNNRNFVGLSVWRNGA 169
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 51.6 bits (118), Expect = 7e-07
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +2
Query: 398 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH--ANFVNSVSG 571
V V++GH ++M + F P S L+TG+ D + +WD + H AN V +V+
Sbjct: 10 VAVLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVAA 69
Query: 572 AR-RGPELLVSASDDNTIKLWD 634
+ G + ++S D T+K WD
Sbjct: 70 SPWLGEDKIISQGRDGTVKCWD 91
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/60 (31%), Positives = 35/60 (58%)
Frame = +2
Query: 323 EGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 502
+GK A+AG+D +I ++N Y + + ++K H + +SPD + + + D TVA+W
Sbjct: 319 DGKIAATAGWDHRIRVYN-YRKGNALAILKYHRATCNAVSYSPDCELMASASEDATVALW 377
Score = 37.9 bits (84), Expect = 0.009
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
Frame = +2
Query: 266 PIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGA--IMQL 439
P+ +L GH+ + FHP L + D ++ IW+ Q V H+ A ++ +
Sbjct: 9 PVAVLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTI-QHRAVSSAWAHSRANGVLAV 67
Query: 440 CFSP--DGSHLYTGATDNTVAVWDVPTG 517
SP + + D TV WD+ G
Sbjct: 68 AASPWLGEDKIISQGRDGTVKCWDIEDG 95
Score = 37.5 bits (83), Expect = 0.012
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Frame = +2
Query: 341 SAGFDRQILIWNVYGQCENVMVMKGHT---GAIMQLCFSPDGSHLYTGATDNTVAVWDVP 511
S G D +I+++N+ + + K T + DG T D+ + V++
Sbjct: 279 SGGADDKIVMYNLNHSTGSCTIRKEITLERPGVSGTSIRVDGKIAATAGWDHRIRVYNYR 338
Query: 512 TGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLW 631
G + LK H N+VS + EL+ SAS+D T+ LW
Sbjct: 339 KGNALAILKYHRATCNAVSYSP-DCELMASASEDATVALW 377
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +2
Query: 716 ILSSGVDNVIKMWDIRNNQIXL-KIKGHTDTVTGLSLS 826
+L+ D I +WDIRN +I L +K H++ V LS++
Sbjct: 234 VLAGYEDGSILLWDIRNAKIPLTSVKFHSEPVLSLSVA 271
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 51.6 bits (118), Expect = 7e-07
Identities = 33/130 (25%), Positives = 62/130 (47%), Gaps = 15/130 (11%)
Frame = +2
Query: 287 HQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMK---------------GHT 421
H + +G++LA+ G D + +W++ + E+V V K GH
Sbjct: 205 HNKQSLALAVSSDGRYLATGGVDCHVHLWDIRTR-EHVQVNKLKNNQVKDSVHCAFTGHC 263
Query: 422 GAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVS 601
G + LCF + L++G+ D T+++W+ T I+ GH + + S+ G E ++S
Sbjct: 264 GIVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIESCFGHQSELLSIDAL--GRERVLS 321
Query: 602 ASDDNTIKLW 631
D T++L+
Sbjct: 322 VGRDRTMQLY 331
Score = 31.5 bits (68), Expect = 0.80
Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 4/137 (2%)
Frame = +2
Query: 284 GHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSH 463
GH G + + F L S +D + IWN + + GH ++ +
Sbjct: 261 GHCGIVSSLCFREGTAELFSGSYDGTLSIWNAEHR-TYIESCFGHQSELLSIDALGRERV 319
Query: 464 LYTGATDNTVAVWD----VPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLW 631
L G D T+ ++ VP TR+ +NF E L S SD+ +I LW
Sbjct: 320 LSVG-RDRTMQLYKVGIVVPESTRLIYRASESNF--ECCCFVNSDEFL-SGSDNGSIALW 375
Query: 632 DARKRNPVASFDSSYPV 682
K+ PV ++++ V
Sbjct: 376 SILKKKPVFIVNNAHHV 392
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 51.6 bits (118), Expect = 7e-07
Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 1/170 (0%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFS 448
+ + GH+G+I+T KF P+GK+LA+ G D + IW + + I Q
Sbjct: 191 VQKINGHKGKIWTLKFSPDGKYLATGGEDGVVKIWRITLSDSLLASFLRQQEPINQQA-- 248
Query: 449 PDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKL 628
L+ + + P ++L GH V + A LL+SAS D T++L
Sbjct: 249 --ALVLF---PQKAFHIEETP----FQELYGHTGDVLDL--AWSDSNLLLSASKDKTVRL 297
Query: 629 WDARKRNPVASFDSSYPVTSVLFNDTAEKILSSG-VDNVIKMWDIRNNQI 775
W + F + VT V FN + +SG +D ++W + ++
Sbjct: 298 WRTGCDQCLHVFHHNNYVTCVEFNPVNKNNFASGSIDGKARIWGLSEERV 347
Score = 37.9 bits (84), Expect = 0.009
Identities = 25/123 (20%), Positives = 49/123 (39%)
Frame = +2
Query: 413 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 592
GHTG ++ L +S D + L + + D TV +W + H N+V V
Sbjct: 270 GHTGDVLDLAWS-DSNLLLSASKDKTVRLWRTGCDQCLHVFH-HNNYVTCVEFNPVNKNN 327
Query: 593 LVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQ 772
S S D ++W + VA D ++++ + + + + + I +N
Sbjct: 328 FASGSIDGKARIWGLSEERVVAWTDVRDSISAISYQPNGNGFVVGCITGNCRFYQILDND 387
Query: 773 IXL 781
+ +
Sbjct: 388 VIM 390
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 51.6 bits (118), Expect = 7e-07
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 8/167 (4%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQ-ILIWNVYGQCENVMVM-KGHTGAIMQL---C 442
L+ H G+I + P G+ D Q I +W++ ++ V+ K G + L
Sbjct: 116 LDAHVGKINCVLWWPSGRCDKLISIDEQNIFLWSLDCSKKSAEVLSKDSAGMLHSLSGGA 175
Query: 443 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 622
+ P + +++V WD+ T ++ ++ HA+ V V + +LV+A D++ I
Sbjct: 176 WDPHDVNAVAATGESSVQFWDLRTMKKVNSIE-HAH-VRGVDYNPKREHILVTAEDESGI 233
Query: 623 KLWDARKRN-PVASFDSSYPVT-SVLFNDTAEK-ILSSGVDNVIKMW 754
+WD RK PV T +V N + ILS+G D+V+ +W
Sbjct: 234 HVWDLRKAKVPVQELPGHTHWTWAVRCNPEYDGLILSAGTDSVVNLW 280
Score = 33.1 bits (72), Expect = 0.26
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +2
Query: 443 FSPDGSHLYTGATDNT-VAVWDVPTG-TRIKKLKGHANFVNSVSGARRGPELLVSASDDN 616
++P H+ A D + + VWD+ +++L GH ++ +V L++SA D+
Sbjct: 216 YNPKREHILVTAEDESGIHVWDLRKAKVPVQELPGHTHWTWAVRCNPEYDGLILSAGTDS 275
Query: 617 TIKLWDA 637
+ LW A
Sbjct: 276 VVNLWYA 282
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 51.2 bits (117), Expect = 9e-07
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 4/136 (2%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSP-- 451
L GH+G + +F+ G L S DRQI++WN + GH + Q F P
Sbjct: 51 LNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPFT 110
Query: 452 DGSHLYTGATDNTVAVWDVPTGTRI--KKLKGHANFVNSVSGARRGPELLVSASDDNTIK 625
D + T D V + + ++ K+L H V ++ P + S +D ++
Sbjct: 111 DDRTIITSGADGQVRLGQILENGKVETKRLGRHHGRVYKLAVLPGDPNVFYSCGEDGFVQ 170
Query: 626 LWDARKRNPVASFDSS 673
+D R + SS
Sbjct: 171 HFDIRSNSATMVLYSS 186
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Frame = +2
Query: 530 KLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD----ARKRN-PVASFDSSYPVTSVL 694
KL GH VN+V G ++LVS SDD I LW+ +RK + P ++ + +
Sbjct: 50 KLNGHEGCVNAVEFNSTG-DVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIP 108
Query: 695 FNDTAEKILSSGVDNVIKMWDIRNN 769
F D I++SG D +++ I N
Sbjct: 109 FTDD-RTIITSGADGQVRLGQILEN 132
Score = 31.9 bits (69), Expect = 0.60
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +2
Query: 443 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 622
F P+ ++ +G+ + +W G ++ + G VN + P LL S + ++
Sbjct: 329 FGPNDEYVTSGSDCGHIFIWKKKGGKLVRAMVGDRRVVNQLESHPHIP-LLASCGIEKSV 387
Query: 623 KLW 631
KLW
Sbjct: 388 KLW 390
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 51.2 bits (117), Expect = 9e-07
Identities = 44/172 (25%), Positives = 81/172 (47%), Gaps = 12/172 (6%)
Frame = +2
Query: 341 SAGFDRQILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG 517
S +D+ + IW +C+ + K H A+ + S +G+ +YTG+ D + VW PTG
Sbjct: 210 SVSWDKTLKIWRASDLRCKESI--KAHDDAVNAIAVSTNGT-VYTGSADRRIRVWAKPTG 266
Query: 518 ----TRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY--- 676
T + L+ H + VN+++ G +L S S D +I +W+ + + +
Sbjct: 267 EKRHTLVATLEKHKSAVNALALNDDG-SVLFSGSCDRSILVWEREDTSNYMAVRGALRGH 325
Query: 677 -PVTSVLFNDTAEKILSSGVDNVIKMW--DIRNNQIXLKI-KGHTDTVTGLS 820
LFN ++ +LS D +++W ++ L++ GHT V L+
Sbjct: 326 DKAILSLFN-VSDLLLSGSADRTVRIWRRGPDSSYSCLEVLSGHTKPVKSLA 376
Score = 33.1 bits (72), Expect = 0.26
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Frame = +2
Query: 593 LVSASDDNTIKLW---DARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW--- 754
+ S S D T+K+W D R + + + D + +V N T + + D I++W
Sbjct: 208 IYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVSTNGT---VYTGSADRRIRVWAKP 264
Query: 755 -DIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
+ + + ++ H V L+L+ DG+ L S
Sbjct: 265 TGEKRHTLVATLEKHKSAVNALALNDDGSVLFS 297
Score = 28.7 bits (61), Expect = 5.6
Identities = 31/139 (22%), Positives = 57/139 (41%)
Frame = +2
Query: 419 TGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLV 598
+G + + FS G ++T D + VW KL + + + L
Sbjct: 125 SGTVKSVGFS--GEKIFTAHQDGKIGVW---------KLTAKSGYKQLTTLPTLNDRLRR 173
Query: 599 SASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIX 778
A N +++ +KR + D+ VT++ +D I S D +K+W + +
Sbjct: 174 FALPKNYVQVRRHKKRLWIEHADA---VTALAVSDGF--IYSVSWDKTLKIWRASDLRCK 228
Query: 779 LKIKGHTDTVTGLSLSWDG 835
IK H D V +++S +G
Sbjct: 229 ESIKAHDDAVNAIAVSTNG 247
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 51.2 bits (117), Expect = 9e-07
Identities = 31/104 (29%), Positives = 52/104 (50%)
Frame = +2
Query: 443 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 622
FS DG L + D+TV + D TG +K L GH V R E++ S S D+ +
Sbjct: 111 FSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEV 170
Query: 623 KLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 754
+LW+A+ + + D P+ S+ F+ E +L+ + + +W
Sbjct: 171 RLWNAKTGECIRTHDFYRPIASIAFHAGGE-LLAVASGHKLHIW 213
Score = 31.5 bits (68), Expect = 0.80
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHL-ASAGFDRQILIWNV-YGQC 391
+ +L GH+ + +FHP + AS D ++ +WN G+C
Sbjct: 138 LKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWNAKTGEC 180
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 51.2 bits (117), Expect = 9e-07
Identities = 31/104 (29%), Positives = 52/104 (50%)
Frame = +2
Query: 443 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 622
FS DG L + D+TV + D TG +K L GH V R E++ S S D+ +
Sbjct: 111 FSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEV 170
Query: 623 KLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 754
+LW+A+ + + D P+ S+ F+ E +L+ + + +W
Sbjct: 171 RLWNAKTGECIRTHDFYRPIASIAFHAGGE-LLAVASGHKLHIW 213
Score = 31.5 bits (68), Expect = 0.80
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHL-ASAGFDRQILIWNV-YGQC 391
+ +L GH+ + +FHP + AS D ++ +WN G+C
Sbjct: 138 LKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWNAKTGEC 180
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 50.8 bits (116), Expect = 1e-06
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Frame = +2
Query: 461 HLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDAR 640
++ G + V DV + T K L GH + VN + P+L+++AS D +++LW+
Sbjct: 100 YVAAGGVKGIIRVIDVNSETIHKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNVE 159
Query: 641 KRNPVASFDSS----YPVTSVLFNDT-AEKILSSGVDNVIKMWDIR 763
+ F + Y V SV F+ + + S G+D IK+W ++
Sbjct: 160 TGICILIFAGAGGHRYEVLSVDFHPSDIYRFASCGMDTTIKIWSMK 205
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 284 GHQGEIFTAKFHPEGKH-LASAGFDRQILIWNV 379
GH+ E+ + FHP + AS G D I IW++
Sbjct: 172 GHRYEVLSVDFHPSDIYRFASCGMDTTIKIWSM 204
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 7/68 (10%)
Frame = +2
Query: 332 HLASAGFDRQ---ILIWNVYGQCENVMVMK-GHT---GAIMQLCFSPDGSHLYTGATDNT 490
HL+S Q + +W++ C V++ K H I Q S DGS + D T
Sbjct: 302 HLSSVAIGNQEGKVYVWDLKS-CPPVLITKLSHNQSKSVIRQTAMSVDGSTILACCEDGT 360
Query: 491 VAVWDVPT 514
+ WDV T
Sbjct: 361 IWRWDVIT 368
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 50.8 bits (116), Expect = 1e-06
Identities = 43/191 (22%), Positives = 83/191 (43%), Gaps = 2/191 (1%)
Frame = +2
Query: 296 EIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTG 475
EI P+ + +A D W+V + M KGH+ + + S + TG
Sbjct: 161 EINAMSVDPQSGSVFTAAGDSCAYCWDVESG-KIKMTFKGHSDYLHTVVSRSSASQILTG 219
Query: 476 ATDNTVAVWDVPTGTRIKKL--KGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRN 649
+ D T +WD TG +K + + + + S A G E + + LW+
Sbjct: 220 SEDGTARIWDCKTGKCVKVIGSQDKKSRLRVSSMALDGSESWLVCGQGKNLALWNLPASE 279
Query: 650 PVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSW 829
V + V V+F++ ++IL+ G + +++ +D+ N + +I H + S+S
Sbjct: 280 CVQTIPIPAHVQDVMFDE--KQILTVGAEPLLRRFDL-NGALLSQI--HCAPCSVFSISL 334
Query: 830 DGAYLLSINGY 862
A ++++ GY
Sbjct: 335 HPAGVVAVGGY 345
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/61 (16%), Positives = 30/61 (49%)
Frame = +2
Query: 620 IKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHT 799
++L + + + P + + ++ + + + ++ D+ WD+ + +I + KGH+
Sbjct: 142 LELINPQHKGPWGALSPMPEINAMSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHS 201
Query: 800 D 802
D
Sbjct: 202 D 202
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/93 (31%), Positives = 50/93 (53%)
Frame = +2
Query: 290 QGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLY 469
QG I + F +G HLA+ G D + I++ Q + V K + GA++ +S DG ++
Sbjct: 303 QGSINSIAFSNDGAHLATVGRDGYLRIFDFLTQ-KLVCGGKSYYGALLCCSWSMDGKYIL 361
Query: 470 TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS 568
TG D+ V VW + + +GH ++V+ V+
Sbjct: 362 TGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVA 394
Score = 32.3 bits (70), Expect = 0.46
Identities = 18/90 (20%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +2
Query: 554 VNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY-PVTSVLFNDTAEKILSSG 730
+NS++ + G L + D ++++D + V S Y + ++ + IL+ G
Sbjct: 306 INSIAFSNDGAHL-ATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTGG 364
Query: 731 VDNVIKMWDIRNNQIXLKIKGHTDTVTGLS 820
D+++++W + + ++ +GH V+G++
Sbjct: 365 EDDLVQVWSMEDRKVVAWGEGHNSWVSGVA 394
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 50.0 bits (114), Expect = 2e-06
Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 8/135 (5%)
Frame = +2
Query: 416 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 595
H AI L S D LY+G+ D T VW V ++ + H + VN+V G L+
Sbjct: 210 HLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAHEDAVNAVVSGFDG--LV 267
Query: 596 VSASDDNTIKLW-------DARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 754
+ S D T+K+W D + VT++ + +A + D + W
Sbjct: 268 FTGSADGTVKVWRREDQAKDTKHFFSETLLKQDCAVTAIAVDQSATLVYCGSSDGTVNFW 327
Query: 755 DIRNN-QIXLKIKGH 796
+ NN + +KGH
Sbjct: 328 ERENNMKNGGVLKGH 342
Score = 43.6 bits (98), Expect = 2e-04
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 13/113 (11%)
Frame = +2
Query: 353 DRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG----T 520
D + W +N V+KGH A+ LC G+ +++G+ D + VW P G
Sbjct: 321 DGTVNFWERENNMKNGGVLKGHKLAV--LCLVAAGNLMFSGSADLGIRVWRRPEGGGEHV 378
Query: 521 RIKKLKGHANFV---------NSVSGARRGPELLVSASDDNTIKLWDARKRNP 652
+ L GHA V SVSG RR ++ S S D ++K+W + +P
Sbjct: 379 CLSVLTGHAGPVKCLAVERDQESVSGERRW--IVYSGSLDRSVKMWRVSESSP 429
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 50.0 bits (114), Expect = 2e-06
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 7/137 (5%)
Frame = +2
Query: 386 QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV 565
+C + +K H+ A+ L + D LY+ + D TV VW + I+ +K H + VNSV
Sbjct: 125 RCRTALWIK-HSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSV 183
Query: 566 SGARRGPELLVSASDDNTIKLWDAR---KRNPVASFDS----SYPVTSVLFNDTAEKILS 724
+ A L+ + S D T+K+W KR + F + VT+++ + A + S
Sbjct: 184 TTAE---SLVFTGSADGTVKVWKREIRGKRTAHSLFQTLLKQESAVTALVTSHMA--VYS 238
Query: 725 SGVDNVIKMWDIRNNQI 775
D + W++ + ++
Sbjct: 239 GSSDGAVNFWEMGDKKL 255
Score = 39.1 bits (87), Expect = 0.004
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 12/74 (16%)
Frame = +2
Query: 326 GKHLASAGFDRQILIWNVYGQCEN-VMVMKGHTGAIMQLCF-SPDGSH----------LY 469
GK L S D++I +W G+ V V+ GHTG + L P G LY
Sbjct: 276 GKLLFSGAADKKICVWRREGKVHTCVSVLTGHTGPVKCLAVVEPSGGEEEDGGDGRLVLY 335
Query: 470 TGATDNTVAVWDVP 511
+G+ D +V VW VP
Sbjct: 336 SGSLDKSVKVWRVP 349
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +2
Query: 335 LASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 502
L SA +DR + +W ++ + + +K H A+ + + S ++TG+ D TV VW
Sbjct: 150 LYSASWDRTVKVWRIH-DLKCIESIKAHDDAVNSVTTAE--SLVFTGSADGTVKVW 202
Score = 32.3 bits (70), Expect = 0.46
Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 1/130 (0%)
Frame = +2
Query: 464 LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK 643
LYTG+ +N + VW K ++ V ++ +R + + D I++W
Sbjct: 37 LYTGSDNNYIRVW--KNLNEFSGFKSNSGLVKAIVISREAK--VFTGHQDGKIRVWKTSS 92
Query: 644 RNP-VASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLS 820
+NP V + S P + +L S V ++R + L IK H+D V+ LS
Sbjct: 93 KNPRVYTRAGSLP--------ALKDVLKSSV-KPSNYVEVRRCRTALWIK-HSDAVSCLS 142
Query: 821 LSWDGAYLLS 850
L+ D L S
Sbjct: 143 LAEDQGLLYS 152
Score = 32.3 bits (70), Expect = 0.46
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 12/88 (13%)
Frame = +2
Query: 404 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW--DVPTGTRIKKLKGHANFVNSV---- 565
V K H A+ LC + G L++GA D + VW + T + L GH V +
Sbjct: 261 VFKKHRLAV--LCIAAAGKLLFSGAADKKICVWRREGKVHTCVSVLTGHTGPVKCLAVVE 318
Query: 566 -SGARR-----GPELLVSASDDNTIKLW 631
SG G +L S S D ++K+W
Sbjct: 319 PSGGEEEDGGDGRLVLYSGSLDKSVKVW 346
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +2
Query: 587 ELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 754
+LL + SD+N I++W + N + F S+ + + K+ + D I++W
Sbjct: 35 DLLYTGSDNNYIRVW--KNLNEFSGFKSNSGLVKAIVISREAKVFTGHQDGKIRVW 88
Score = 28.3 bits (60), Expect = 7.4
Identities = 29/157 (18%), Positives = 64/157 (40%)
Frame = +2
Query: 410 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 589
K ++G + + S + ++TG D + VW T ++ ++ A + ++ +
Sbjct: 59 KSNSGLVKAIVISREAK-VFTGHQDGKIRVWK--TSSKNPRVYTRAGSLPALKDVLKS-- 113
Query: 590 LLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNN 769
S N +++ R + D+ V+ + + + S+ D +K+W I +
Sbjct: 114 ---SVKPSNYVEVRRCRTALWIKHSDA---VSCLSLAEDQGLLYSASWDRTVKVWRIHDL 167
Query: 770 QIXLKIKGHTDTVTGLSLSWDGAYLLSINGYTLVXGR 880
+ IK H D V ++ + + S +G V R
Sbjct: 168 KCIESIKAHDDAVNSVTTAESLVFTGSADGTVKVWKR 204
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 49.6 bits (113), Expect = 3e-06
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 6/130 (4%)
Frame = +2
Query: 392 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGT-RIKKLKGHANFVNSVS 568
E V + GHT + + + P+ +Y+ + D++V WDV TG + G A +N+V
Sbjct: 263 EAVTSLVGHTQCVSSVVW-PEHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKA--LNTVD 319
Query: 569 GARRGPELLVSASDDNTIKLWDARKRN---PVASFDS-SYPVTSVLFNDTAE-KILSSGV 733
L+ + D +++WD RK PV F S S +++ ++ ++ +LS+
Sbjct: 320 VGGESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASY 379
Query: 734 DNVIKMWDIR 763
D I +WD+R
Sbjct: 380 DGKIMLWDLR 389
Score = 41.1 bits (92), Expect = 0.001
Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Frame = +2
Query: 368 IWNVYGQCENVMVMKGHTGAIMQLCF--SPDGSHLY--TGATDNTVAVW------DVPTG 517
+W+ G C +++ +GH+GAI + S D + T + D T+ ++ V +
Sbjct: 135 VWSSAGSCSHIL--EGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDST 192
Query: 518 TRI---KKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTS 688
T++ K L+GH V SVS + G ++ S+S D TI LW+ N S S V
Sbjct: 193 TKVRAYKILRGHKASVQSVSAQKSG-NMVCSSSWDCTINLWNT---NESTSEGESVSVKK 248
Query: 689 VLFNDTAEKILSSG 730
N+ AE+ S G
Sbjct: 249 RKGNNQAEESQSEG 262
Score = 34.3 bits (75), Expect = 0.11
Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 4/125 (3%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDG 457
L GH + ++ PE + S+ +D + W+V +++ + G A+ + +
Sbjct: 268 LVGHT-QCVSSVVWPEHDVIYSSSWDHSVRRWDVETGKDSLNLFCGK--ALNTVDVGGES 324
Query: 458 SHLYT-GATDNTVAVWDVP---TGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 625
S L G +D + VWD T + + H++++++ + L+SAS D I
Sbjct: 325 SALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIM 384
Query: 626 LWDAR 640
LWD R
Sbjct: 385 LWDLR 389
>At3g56900.1 68416.m06329 aladin-related / adracalin-related weak
similarity to SP|Q9NRG9 Aladin (Adracalin) (GL003) {Homo
sapiens}; non-consensus AT-AC splice sites at intron 6
Length = 447
Score = 49.6 bits (113), Expect = 3e-06
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 4/183 (2%)
Frame = +2
Query: 296 EIFTAKFHPEGKHLASAGFDRQ-ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYT 472
+I + P G++LASA +D IW+V Q + +G G I L +SP G + +
Sbjct: 214 QISALSWSPCGRYLASASYDSSSFTIWDV-SQGAGTPIRRG-LGGISMLKWSPTGDYFFA 271
Query: 473 GATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE---LLVSASDDNTIKLWDARK 643
D T +W+ T T + ++ SV+GA PE +L+S S +T+
Sbjct: 272 ARFDGTFCLWE--TNTWTSEPWSLSSGSGSVTGAIWDPEGRFILISFSKSSTLGSVHFSS 329
Query: 644 RNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSL 823
+ P S D+ + V + A G++ + WD ++ + KG + GL
Sbjct: 330 KPP--SLDAH--LLPVELPEIASLTGCEGIEKI--AWDASGERLAVSYKGGDENYKGLIA 383
Query: 824 SWD 832
+D
Sbjct: 384 IYD 386
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 49.6 bits (113), Expect = 3e-06
Identities = 29/93 (31%), Positives = 51/93 (54%)
Frame = +2
Query: 290 QGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLY 469
QG I + F +G +LA+ G D + I++ Q + V +K + GA++ +S DG +L
Sbjct: 303 QGAINSIAFSNDGAYLATVGRDGYLRIFDFSTQ-KLVCGVKSYYGALLCCAWSMDGKYLL 361
Query: 470 TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS 568
TG D+ V VW + + +GH ++V+ V+
Sbjct: 362 TGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVA 394
Score = 39.5 bits (88), Expect = 0.003
Identities = 33/137 (24%), Positives = 60/137 (43%), Gaps = 14/137 (10%)
Frame = +2
Query: 422 GAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVS 601
GAI + FS DG++L T D + ++D T + +K + + + + G LL
Sbjct: 304 GAINSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTG 363
Query: 602 ASDDNTIKLWDARKRNPVA------------SFDS--SYPVTSVLFNDTAEKILSSGVDN 739
DD +++W R VA +FDS S P + + + S G D
Sbjct: 364 GEDD-LVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSEGSGENVMYRFGSVGQDT 422
Query: 740 VIKMWDIRNNQIXLKIK 790
+ +WD+ ++I + ++
Sbjct: 423 QLLLWDLEMDEIVVPLR 439
Score = 33.1 bits (72), Expect = 0.26
Identities = 41/205 (20%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Frame = +2
Query: 272 MLLEGHQGEIFTAKFHPE----GKHLASAG-FDRQILIWNVYGQCENVMVMKGHTGAIMQ 436
+L+ + G+++T + GK L SA +++ + N +C ++ + G G+ +
Sbjct: 195 LLIGLNSGDVYTVSLRQQLQDVGKKLVSAQHYNKDGSVNN--SRCTSIAWVPGGDGSFVA 252
Query: 437 LCFSPDGS-HLYT----GATDNTVAVWDVPTGTRIKKLK-GHAN----------FVNSVS 568
DG+ ++Y GATD++ + PT + K K +N +NS++
Sbjct: 253 A--HADGNLYVYEKNKEGATDSSFSAIRDPTQFSVDKAKYSKSNPVARWHIGQGAINSIA 310
Query: 569 GARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVI 745
+ G L + D ++++D + V S Y + ++ + +L+ G D+++
Sbjct: 311 FSNDGA-YLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGGEDDLV 369
Query: 746 KMWDIRNNQIXLKIKGHTDTVTGLS 820
++W + + ++ +GH V+G++
Sbjct: 370 QVWSMEDRKVVAWGEGHNSWVSGVA 394
Score = 31.9 bits (69), Expect = 0.60
Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 4/120 (3%)
Frame = +2
Query: 341 SAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSH----LYTGATDNTVAVWDV 508
S G D Q+L+W++ E V+ ++ G +H + G + DV
Sbjct: 417 SVGQDTQLLLWDLEMD-EIVVPLRRPPGGSPTYSTGSQSAHWDNIVPMGTLQPAPCMRDV 475
Query: 509 PTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTS 688
P ++ + H +SG E L++A + +K+W P +S +++ P TS
Sbjct: 476 P---KLSPVVAHRVHTEPLSGLIFTQESLITACREGHLKIWTRPDTQPSSSSEATNPTTS 532
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 49.2 bits (112), Expect = 4e-06
Identities = 43/177 (24%), Positives = 73/177 (41%), Gaps = 8/177 (4%)
Frame = +2
Query: 287 HQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQ-CENVMVMKGHTGAIMQLCFSPDGSH 463
H I FHP L S+ D I ++ + + T + + F P G
Sbjct: 83 HAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEF 142
Query: 464 LYTGATDNTVAVWDVPTGTRIKKLK----GHANFVNSVSGARRGPELLVSASDDNTIKLW 631
L G ++DV T G + +N V + G + ++AS D I+L+
Sbjct: 143 LLAGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTG-SIYITASKDGAIRLF 201
Query: 632 DARKRNPVASFDSSY---PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKG 793
D V S +++ VTS +F +LSSG D+ +K+W+I + ++ + G
Sbjct: 202 DGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGSGRMVKEYLG 258
Score = 45.2 bits (102), Expect = 6e-05
Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 15/137 (10%)
Frame = +2
Query: 416 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVP---------TGTR--IKKLKGHANFVNS 562
H + FSPDG TG D ++ +++VP T R I+ HA +N
Sbjct: 30 HKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHAEPIND 89
Query: 563 VSGARRGPELLVSASDDNTIKLWDARK---RNPVASFDSSYPVTSVLFNDTAEKILSSGV 733
+ R +L+S++ DN IK +D K + F ++ V S+ F+ + E +L +G
Sbjct: 90 LDFHPRS-TILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEFLL-AGT 147
Query: 734 DNVI-KMWDIRNNQIXL 781
D+ I ++D+ Q L
Sbjct: 148 DHPIPHLYDVNTYQCFL 164
Score = 37.1 bits (82), Expect = 0.016
Identities = 43/177 (24%), Positives = 72/177 (40%), Gaps = 17/177 (9%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNV-------YGQCEN---VMVMKGHTGA 427
L H+ + A+F P+G A+ G D I ++ V G + + H
Sbjct: 27 LSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHAEP 86
Query: 428 IMQLCFSPDGSHLYTGATDNTVAVWDV--PTGTRIKKLKGHANFVNSVSGARRGPELLVS 601
I L F P + L + A DN + +D T R K+ + V S+S G E L++
Sbjct: 87 INDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSG-EFLLA 145
Query: 602 ASDDNTIKLWDARKRN---PVASFDS--SYPVTSVLFNDTAEKILSSGVDNVIKMWD 757
+D L+D P DS S + V ++ T +++ D I+++D
Sbjct: 146 GTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKDGAIRLFD 202
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 49.2 bits (112), Expect = 4e-06
Identities = 43/177 (24%), Positives = 73/177 (41%), Gaps = 8/177 (4%)
Frame = +2
Query: 287 HQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQ-CENVMVMKGHTGAIMQLCFSPDGSH 463
H I FHP L S+ D I ++ + + T + + F P G
Sbjct: 175 HAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEF 234
Query: 464 LYTGATDNTVAVWDVPTGTRIKKLK----GHANFVNSVSGARRGPELLVSASDDNTIKLW 631
L G ++DV T G + +N V + G + ++AS D I+L+
Sbjct: 235 LLAGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTG-SIYITASKDGAIRLF 293
Query: 632 DARKRNPVASFDSSY---PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKG 793
D V S +++ VTS +F +LSSG D+ +K+W+I + ++ + G
Sbjct: 294 DGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGSGRMVKEYLG 350
Score = 45.2 bits (102), Expect = 6e-05
Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 15/137 (10%)
Frame = +2
Query: 416 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVP---------TGTR--IKKLKGHANFVNS 562
H + FSPDG TG D ++ +++VP T R I+ HA +N
Sbjct: 122 HKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHAEPIND 181
Query: 563 VSGARRGPELLVSASDDNTIKLWDARK---RNPVASFDSSYPVTSVLFNDTAEKILSSGV 733
+ R +L+S++ DN IK +D K + F ++ V S+ F+ + E +L +G
Sbjct: 182 LDFHPRS-TILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEFLL-AGT 239
Query: 734 DNVI-KMWDIRNNQIXL 781
D+ I ++D+ Q L
Sbjct: 240 DHPIPHLYDVNTYQCFL 256
Score = 37.1 bits (82), Expect = 0.016
Identities = 43/177 (24%), Positives = 72/177 (40%), Gaps = 17/177 (9%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNV-------YGQCEN---VMVMKGHTGA 427
L H+ + A+F P+G A+ G D I ++ V G + + H
Sbjct: 119 LSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHAEP 178
Query: 428 IMQLCFSPDGSHLYTGATDNTVAVWDV--PTGTRIKKLKGHANFVNSVSGARRGPELLVS 601
I L F P + L + A DN + +D T R K+ + V S+S G E L++
Sbjct: 179 INDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSG-EFLLA 237
Query: 602 ASDDNTIKLWDARKRN---PVASFDS--SYPVTSVLFNDTAEKILSSGVDNVIKMWD 757
+D L+D P DS S + V ++ T +++ D I+++D
Sbjct: 238 GTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKDGAIRLFD 294
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 49.2 bits (112), Expect = 4e-06
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Frame = +2
Query: 416 HTGAIMQLCFSPDGSHLYTGAT-DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 592
HT +++ L ++ + ++ A+ D V VWDV TGT ++ H V +V+ PE+
Sbjct: 264 HTESVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEV 323
Query: 593 LVSASDDNTIKLWDARKRNPVA-SFDSSYPVTSVLFNDTAE-KILSSGVDNVIKMWDIRN 766
L+S S D T+ + D R+ + + V S+ ++ E + S D +K +DIR
Sbjct: 324 LLSGSFDQTVVMKDGRQPSHSGFKWSVMSDVESLAWDPHCEHSFVVSLEDGTVKGFDIRA 383
Query: 767 NQ 772
Q
Sbjct: 384 AQ 385
Score = 48.4 bits (110), Expect = 7e-06
Identities = 46/191 (24%), Positives = 89/191 (46%), Gaps = 16/191 (8%)
Frame = +2
Query: 335 LASAGFDRQILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSH-LYTGATDNTVAVWDV 508
LASA D+++ +W+V G C+ + M+ HT + + ++ L +G+ D TV + D
Sbjct: 281 LASASADKKVKVWDVATGTCK--ITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVMKDG 338
Query: 509 PTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKR--------NPVASF 664
+ + V S++ V + +D T+K +D R NP +
Sbjct: 339 RQPSHSGFKWSVMSDVESLAWDPHCEHSFVVSLEDGTVKGFDIRAAQSGSDSDLNPTYTI 398
Query: 665 DSSYP---VTSVLFNDTAEKILSSG-VDNVIKMWDIRNNQ--IXLKIKGHTDTVTGLSLS 826
+ V+S+ +N + +L++G +D +K+WD+ NN+ + + V +S +
Sbjct: 399 QAHAQDRGVSSISYNISTPNLLATGSMDKSVKLWDLSNNEPSCIATHQPNAGAVFSISFA 458
Query: 827 WDGAYLLSING 859
D +LL+I G
Sbjct: 459 VDNPFLLAIGG 469
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 48.8 bits (111), Expect = 5e-06
Identities = 40/124 (32%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGF-DRQILIW--NVYGQC-ENVMVMKGHTGAIMQLCF 445
L G G++++ G L AG D IL W N C E + GHT A++ L
Sbjct: 226 LSGPVGQVYSLVV---GTDLLFAGTQDGSILAWRYNAATNCFEPSASLTGHTLAVVTLYV 282
Query: 446 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 625
+ LY+G+ D T+ VW + I+ L H++ V S+ + L+S S DNT+K
Sbjct: 283 G--ANRLYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSLI---CWDQFLLSCSLDNTVK 337
Query: 626 LWDA 637
+W A
Sbjct: 338 IWAA 341
Score = 46.0 bits (104), Expect = 3e-05
Identities = 36/154 (23%), Positives = 70/154 (45%), Gaps = 6/154 (3%)
Frame = +2
Query: 191 EISVVGTREKAVVTSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILI 370
++ GT++ +++ +N + P L GH + T + L S D+ I +
Sbjct: 241 DLLFAGTQDGSILAWRYNAATNCFEPSASLTGHTLAVVT--LYVGANRLYSGSMDKTIKV 298
Query: 371 WNVYG-QCENVMVMKGHTGAIMQL-CFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 544
W++ QC + + H+ +M L C+ L + + DNTV +W G ++ H
Sbjct: 299 WSLDNLQC--IQTLTDHSSVVMSLICWD---QFLLSCSLDNTVKIWAAIEGGNLEVTYTH 353
Query: 545 A--NFVNSVSGAR--RGPELLVSASDDNTIKLWD 634
+ V ++ G +L+ A +DNT++L+D
Sbjct: 354 KEEHGVLALCGVHDAEAKPVLLCACNDNTLRLYD 387
Score = 40.3 bits (90), Expect = 0.002
Identities = 38/142 (26%), Positives = 58/142 (40%), Gaps = 6/142 (4%)
Frame = +2
Query: 347 GFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRI 526
G + WN+ + + G G + L D L+ G D ++ W T
Sbjct: 208 GMPNLVKAWNIETNADQSL--SGPVGQVYSLVVGTD--LLFAGTQDGSILAWRYNAATNC 263
Query: 527 ----KKLKGHANFVNSVS-GARRGPELLVSASDDNTIKLWDARKRNPVASF-DSSYPVTS 688
L GH V ++ GA R L S S D TIK+W + + D S V S
Sbjct: 264 FEPSASLTGHTLAVVTLYVGANR----LYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMS 319
Query: 689 VLFNDTAEKILSSGVDNVIKMW 754
++ D + +LS +DN +K+W
Sbjct: 320 LICWD--QFLLSCSLDNTVKIW 339
Score = 39.1 bits (87), Expect = 0.004
Identities = 34/110 (30%), Positives = 44/110 (40%), Gaps = 8/110 (7%)
Frame = +2
Query: 407 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG--TRIKKLKGHANFVNSVSGARR 580
+ GH + + LYTG+ D T+ VWD +G T + KL G V S
Sbjct: 147 LDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLKLGGEIGCVLS-----E 201
Query: 581 GPELLVSASDDNTIKLW------DARKRNPVASFDSSYPVTSVLFNDTAE 712
GP LLV N +K W D PV S T +LF T +
Sbjct: 202 GPWLLVGM--PNLVKAWNIETNADQSLSGPVGQVYSLVVGTDLLFAGTQD 249
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 48.4 bits (110), Expect = 7e-06
Identities = 27/75 (36%), Positives = 33/75 (44%)
Frame = +2
Query: 416 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 595
H AI + + S L T + D T+ VWDV L GH V S+ +LL
Sbjct: 127 HYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLL 186
Query: 596 VSASDDNTIKLWDAR 640
VS S D LWD R
Sbjct: 187 VSGSRDGCFALWDLR 201
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +2
Query: 446 SPDGSHLYTGATDNTVAVWDV--PTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNT 619
SPDG ++ +G++D +W V P I LKGH V +V + + +ASDD T
Sbjct: 347 SPDGEYVLSGSSDGNAYIWQVNKPQVDPI-ILKGHDFEVTAVDWSPSEIGKVATASDDFT 405
Query: 620 IKLWD 634
++LW+
Sbjct: 406 VRLWN 410
Score = 35.9 bits (79), Expect = 0.037
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +2
Query: 320 PEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVA 496
P+G+++ S D IW V + +++KGH + + +SP + + T + D TV
Sbjct: 348 PDGEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIGKVATASDDFTVR 407
Query: 497 VWDVPTGTRIKKLKGHANFVNSVSGARR 580
+W++ + +AN SVS +R
Sbjct: 408 LWNIE-----NNICTNANATASVSRVKR 430
Score = 33.9 bits (74), Expect = 0.15
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Frame = +2
Query: 539 GHANFVNSVSGARRGPELLVSAS-DDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEK 715
GH + NS S + SA+ +NT K AR R+ +A +++ + + S + D+
Sbjct: 94 GHVSLFNSSS-----KKFASSATHQENTEK---ARFRDWIAHYNAIFDI-SWIKGDSC-- 142
Query: 716 ILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGL 817
+L++ D IK+WD+ N+ + GHT TV +
Sbjct: 143 LLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSM 176
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +2
Query: 587 ELLVSASDDNTIKLWDARKR--NPVASFDSSYPVTSVLFNDTA-EKILSSGVDNVIKMWD 757
E ++S S D +W K +P+ + VT+V ++ + K+ ++ D +++W+
Sbjct: 351 EYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIGKVATASDDFTVRLWN 410
Query: 758 IRNN 769
I NN
Sbjct: 411 IENN 414
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 48.4 bits (110), Expect = 7e-06
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 14/162 (8%)
Frame = +2
Query: 281 EGHQGEIFTAKFHPEGKH-LASAGFDRQILIWNVYGQCENVMVMK---GHTGAI-MQLC- 442
+GH + ++HP K + ++ D + IW+V V+K G + + C
Sbjct: 275 KGHICGLTCGEWHPRTKETVLTSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCA 334
Query: 443 FSPDGSHLYTGATDNTVAVWDVPTG----TRIKKLKGHANFVNSVSGARRGPELLVSASD 610
+ DG + G D ++ +W + G I K H + + SV + G +L+S S
Sbjct: 335 WDRDGKRIAGGVGDGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDG-RILLSRSF 393
Query: 611 DNTIKLWDARK-RNPVASFD---SSYPVTSVLFNDTAEKILS 724
D ++K+WD R+ + + F+ + YP T+V F+ + IL+
Sbjct: 394 DGSLKVWDLRQMKEALKVFEGLPNYYPQTNVAFSPDEQIILT 435
Score = 43.2 bits (97), Expect = 2e-04
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Frame = +2
Query: 524 IKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKR-------NPVASFDSSYPV 682
+K KGH + R E ++++S+D ++++WD P + PV
Sbjct: 271 LKNTKGHICGLTCGEWHPRTKETVLTSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPV 330
Query: 683 TSVLFNDTAEKILSSGVDNVIKMWDIR---NNQIXLKI-KGHTDTVTGLSLSWDGAYLLS 850
T+ ++ ++I D I++W ++ ++ + + K HTD +T + S DG LLS
Sbjct: 331 TTCAWDRDGKRIAGGVGDGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLS 390
Score = 37.1 bits (82), Expect = 0.016
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 281 EGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQ--LCFSPD 454
+ H +I + KF +G+ L S FD + +W++ E + V +G Q + FSPD
Sbjct: 370 KAHTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMKEALKVFEGLPNYYPQTNVAFSPD 429
Query: 455 GSHLYTGAT 481
+ TG +
Sbjct: 430 EQIILTGTS 438
Score = 32.7 bits (71), Expect = 0.35
Identities = 26/116 (22%), Positives = 50/116 (43%), Gaps = 10/116 (8%)
Frame = +2
Query: 470 TGATDNTVAVWDVP---TGTRI--KKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWD 634
T + D ++ +WDV + T++ KL + R + + D +I++W
Sbjct: 296 TSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCAWDRDGKRIAGGVGDGSIQIWS 355
Query: 635 ARK---RNPVASFDSSYP--VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKI 787
+ P ++ +TSV F+ +LS D +K+WD+R + LK+
Sbjct: 356 LKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMKEALKV 411
>At1g80710.1 68414.m09470 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to damage-specific DNA-binding protein 2 (DDB2)
[Mus musculus]
Length = 516
Score = 48.4 bits (110), Expect = 7e-06
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 11/151 (7%)
Frame = +2
Query: 425 AIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVS 601
AI L P D LY G VWD+ G + + H +NS+ + P ++ +
Sbjct: 307 AIFSLSQRPNDEQSLYFGQDYGVFNVWDLRAGKSVFHWELHERRINSIDFNPQNPHVMAT 366
Query: 602 ASDDNTIKLWD-----ARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRN 766
+S D T LWD A+K +++ + S V S F+ + + ++ +DN I + N
Sbjct: 367 SSTDGTACLWDLRSMGAKKPKTLSTVNHSRAVHSAYFSPSGLSLATTSLDNYIGVLSGAN 426
Query: 767 NQIXLKIKGHTDTVTGLS-----LSWDGAYL 844
+ I H +T +S WD +Y+
Sbjct: 427 FENTCMIY-HNNTSRWISKFKAVWGWDDSYI 456
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 48.4 bits (110), Expect = 7e-06
Identities = 28/123 (22%), Positives = 55/123 (44%), Gaps = 4/123 (3%)
Frame = +2
Query: 299 IFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMK----GHTGAIMQLCFSPDGSHL 466
I + F P L + +D Q+ W + ++ H ++ + DG+ +
Sbjct: 28 ISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTTV 87
Query: 467 YTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKR 646
++G D +W + +G + + H + +++ G LL + S D T+K WD R++
Sbjct: 88 FSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIP-GMNLLATGSWDKTLKYWDTRQQ 146
Query: 647 NPV 655
NPV
Sbjct: 147 NPV 149
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 48.0 bits (109), Expect = 9e-06
Identities = 54/227 (23%), Positives = 91/227 (40%), Gaps = 10/227 (4%)
Frame = +2
Query: 161 SLLPSKRVRHEISVVGTREKAVVTSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHL- 337
S+ S RH +S V R K SS+ +T + L GH + + HL
Sbjct: 121 SISDSDVPRHVLSSVRHRPKG---SSL-QTEMPSRMSISLTGHTKAVTAIDWSTSHVHLL 176
Query: 338 ASAGFDRQILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 514
ASAG D + +WNV+ + V H + + +S G L + D T ++DV
Sbjct: 177 ASAGLDGAVYVWNVWSNDKKKVRAFLHHNAPVKDVKWSKQGLSLLSCGYDCTSRLFDVER 236
Query: 515 GTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY-PVTSV 691
G + K V V + +S +++LWD R V + P+ V
Sbjct: 237 GVETQSFK-EDEVVGVVKFHPDNCNVFLSGGSKGSLRLWDIRANKFVHEYVRDLGPILDV 295
Query: 692 LFNDTAEKILSSG-------VDNVIKMWDIRNNQIXLKIKGHTDTVT 811
F ++ +SS +N + +WDI + ++ L + + + T
Sbjct: 296 EFIAGGKQFISSSDVSGRNISENAVIVWDI-SREVPLSNQVYVEAYT 341
Score = 36.3 bits (80), Expect = 0.028
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +2
Query: 410 KGH--TGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 583
+GH G ++ FSPDG L +G++D +V ++D + IKKLK + +VS
Sbjct: 381 EGHWVAGFPIKCNFSPDGETLASGSSDGSVYMYDYKSTALIKKLKAYEQPCVNVSYHPVL 440
Query: 584 PELLVSASDDNTIKLWD 634
P ++ + S + + +++
Sbjct: 441 PNVVAACSWNGQVSVFE 457
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 48.0 bits (109), Expect = 9e-06
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Frame = +2
Query: 446 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG-HANFVNSVSGARRGPELLVSASDDNTI 622
S D L +G + + VA++D+ GTR++ H +N V + P L ++S D +
Sbjct: 550 STDQLFLASGYSKD-VALYDIGRGTRLQVFANMHQEHINVVKFSNHSPFLFATSSFDKDV 608
Query: 623 KLWDARKR--NPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIK 748
KLWD R+ P + S+ V F+ +L+S VDN ++
Sbjct: 609 KLWDLRQEPSRPCYTASSTKGNVMVCFSPDDRYLLASAVDNEVR 652
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 287 HQGEIFTAKFHPEGKHL-ASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSH 463
HQ I KF L A++ FD+ + +W++ + T + +CFSPD +
Sbjct: 582 HQEHINVVKFSNHSPFLFATSSFDKDVKLWDLRQEPSRPCYTASSTKGNVMVCFSPDDRY 641
Query: 464 LYTGATDNTV 493
L A DN V
Sbjct: 642 LLASAVDNEV 651
Score = 33.9 bits (74), Expect = 0.15
Identities = 30/151 (19%), Positives = 66/151 (43%), Gaps = 14/151 (9%)
Frame = +2
Query: 452 DGSHLYTGATDNTVAVWDVPTGTRIKKL--KGHANFVNSVSGARRGPELLVSASDDNTIK 625
D S + G D V V + +G + + G + + + + P ++++ S + ++K
Sbjct: 454 DPSLMVFGTLDGEVVVLNHESGKIFRYIPSNGSQSTILGLCWLKIYPSMVIAGSANGSLK 513
Query: 626 LWDARKRNPVAS-----------FDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDI-RNN 769
L+D +K + + FD +TSV N T + L+SG + ++DI R
Sbjct: 514 LYDIQKASSTVTTSSHSTSGSVTFDEFDQLTSVHANSTDQLFLASGYSKDVALYDIGRGT 573
Query: 770 QIXLKIKGHTDTVTGLSLSWDGAYLLSINGY 862
++ + H + + + S +L + + +
Sbjct: 574 RLQVFANMHQEHINVVKFSNHSPFLFATSSF 604
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 48.0 bits (109), Expect = 9e-06
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 6/173 (3%)
Frame = +2
Query: 266 PIMLLEGHQGEI-FTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLC 442
P +LL GHQ + F P + S G D+ +++WN+ ++ + M G
Sbjct: 200 PDLLLIGHQDDAEFALAMCPTEPFVLSGGKDKSVILWNI----QDHITMAGSDSK----- 250
Query: 443 FSPDGSHLYTG-ATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNT 619
SP S TG +D T P G GH + V V+ + S DD+
Sbjct: 251 -SPGSSFKQTGEGSDKTGGPSVGPRGI----YNGHKDTVEDVAFCPSSAQEFCSVGDDSC 305
Query: 620 IKLWDARK-RNPVASFDSSY--PVTSVLFNDTAEK-ILSSGVDNVIKMWDIRN 766
+ LWDAR +P + ++ + V +N IL+ DN ++++D RN
Sbjct: 306 LMLWDARTGTSPAMKVEKAHDADLHCVDWNPHDNNLILTGSADNTVRVFDRRN 358
Score = 46.0 bits (104), Expect = 3e-05
Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 9/132 (6%)
Frame = +2
Query: 266 PIMLLEGHQGEIFTAKFHPEG-KHLASAGFDRQILIWNVY-GQCENVMVMKGHTGAIMQL 439
P + GH+ + F P + S G D +++W+ G + V K H + +
Sbjct: 273 PRGIYNGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCV 332
Query: 440 CFSP-DGSHLYTGATDNTVAVWDVPT------GTRIKKLKGHANFVNSVSGARRGPELLV 598
++P D + + TG+ DNTV V+D G+ + K +GH V V + +
Sbjct: 333 DWNPHDNNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWSPDKSSVFG 392
Query: 599 SASDDNTIKLWD 634
S+++D + +WD
Sbjct: 393 SSAEDGLLNIWD 404
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 48.0 bits (109), Expect = 9e-06
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Frame = +2
Query: 347 GFDRQILIWNVYGQCENVMVMKG-HTGAIMQLC-FSPDGSHLYTGATDNTVAVW----DV 508
GF + L + Y Q + + + H G +Q S DG + TGA D V+VW D
Sbjct: 3248 GFPDRTLRFMSYDQDKLLSTHENLHEGNQIQCAGVSHDGRIVVTGAEDGLVSVWRVSKDG 3307
Query: 509 PTGTRIKKLKGH--ANFVNSVSGARRGPELLV-SASDDNTIKLWDARKRNPVASFDS-SY 676
P G+R +L+ A+ + P +++ S+SDD T+ +WD + V + S
Sbjct: 3308 PRGSRRLRLEKSLCAHTAKVICLRVSQPYMMIASSSDDCTVIIWDLSSLSFVRQLPNFSV 3367
Query: 677 PVTSVLFNDTAEKILSSGVDNVIKMWDIRNN 769
PVT V ND +I+++ +V+ +W I +
Sbjct: 3368 PVTVVYINDLTGEIVTA-AGSVLAVWSINGD 3397
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 48.0 bits (109), Expect = 9e-06
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 15/195 (7%)
Frame = +2
Query: 287 HQGEIFTAKFHPEGKHLASAGFDRQILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSH 463
H + + +G L SA +DR IW +C + + K H AI + S DG
Sbjct: 191 HVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLD-SIEKAHDDAINAIVVSKDG-F 248
Query: 464 LYTGATDNTVAVWDV--PTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLW-- 631
+YTG+ D + VW+ + + L H + VN+++ + G ++L S + D +I +W
Sbjct: 249 VYTGSADKKIKVWNKKDKKHSLVATLTKHLSAVNALAISEDG-KVLYSGACDRSILVWER 307
Query: 632 -----DARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW-----DIRNNQIXL 781
D V + + ++ +LS D +++W +
Sbjct: 308 LINGDDEELHMSVVGALRGHRKAIMCLAVASDLVLSGSADKSLRVWRRGLMEKEGYSCLA 367
Query: 782 KIKGHTDTVTGLSLS 826
++GHT V L++S
Sbjct: 368 VLEGHTKPVKSLAVS 382
Score = 46.8 bits (106), Expect = 2e-05
Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 8/137 (5%)
Frame = +2
Query: 245 RTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCEN-VMVMKGHT 421
RTS+ + + H I +G + + D++I +WN + + V + H
Sbjct: 220 RTSDFKCLDSIEKAHDDAINAIVVSKDG-FVYTGSADKKIKVWNKKDKKHSLVATLTKHL 278
Query: 422 GAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARR------- 580
A+ L S DG LY+GA D ++ VW+ ++L H + V ++ G R+
Sbjct: 279 SAVNALAISEDGKVLYSGACDRSILVWERLINGDDEEL--HMSVVGALRGHRKAIMCLAV 336
Query: 581 GPELLVSASDDNTIKLW 631
+L++S S D ++++W
Sbjct: 337 ASDLVLSGSADKSLRVW 353
Score = 30.7 bits (66), Expect = 1.4
Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 5/134 (3%)
Frame = +2
Query: 464 LYTGATDNTVAVWD-VPTGTRIKKLKGHANFVNSVSGARRG----PELLVSASDDNTIKL 628
LYTG++++ + VW P + N V + +G + + L+SA D+ I++
Sbjct: 82 LYTGSSNSEIRVWPREPPFSPEYSTGDDRNVVANGNGGVKSLVILGDKLISAHQDHKIRV 141
Query: 629 WDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTV 808
W + T ND + + SS ++R ++ + H D V
Sbjct: 142 WKIIDESNRRGQKYKCVATLPTMNDRFKTLFSSK-----SYVEVRRHKKCTWVH-HVDAV 195
Query: 809 TGLSLSWDGAYLLS 850
+ L+LS DG+ L S
Sbjct: 196 SSLALSQDGSLLYS 209
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 47.6 bits (108), Expect = 1e-05
Identities = 46/199 (23%), Positives = 94/199 (47%), Gaps = 9/199 (4%)
Frame = +2
Query: 203 VGTREKAVVTSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGF-DRQILIWNV 379
+GT E ++ + + + + L +F F+ E +++ ++G D+++ +W+V
Sbjct: 185 IGTMESSIEIWDLDLVNEVLPCVQLGRIAGQTLFFLTFNWENRNIVASGSEDKKVKVWDV 244
Query: 380 Y-GQCENVMVMKGHTGAIMQLCFSPDGSH-LYTGATDNTVAVWDV--PTGTRIKKLKGHA 547
G+C+ + M+ H + + ++ L +G+ D TV + D P+ + +K A
Sbjct: 245 ATGKCK--VTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVLKDGRDPSNSGLK-WSTEA 301
Query: 548 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASF---DSSYPVTSVLFNDTAEKI 718
V ++ V + D T+K +D R + SF V+S+ +N A +
Sbjct: 302 K-VEKLAWDPHSEHSFVVSLKDGTVKGFDTRASDLSPSFIIHAHDSEVSSISYNIHAPNL 360
Query: 719 LSSG-VDNVIKMWDIRNNQ 772
L++G D +K+WD+ NNQ
Sbjct: 361 LATGSADESVKLWDLSNNQ 379
Score = 46.4 bits (105), Expect = 3e-05
Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 4/131 (3%)
Frame = +2
Query: 470 TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDAR-KR 646
+G+ D V VWDV TG ++ H V++V+ PE+L+S S D T+ L D R
Sbjct: 232 SGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVLKDGRDPS 291
Query: 647 NPVASFDSSYPVTSVLFNDTAE-KILSSGVDNVIKMWDIRNNQI--XLKIKGHTDTVTGL 817
N + + V + ++ +E + S D +K +D R + + I H V+ +
Sbjct: 292 NSGLKWSTEAKVEKLAWDPHSEHSFVVSLKDGTVKGFDTRASDLSPSFIIHAHDSEVSSI 351
Query: 818 SLSWDGAYLLS 850
S + LL+
Sbjct: 352 SYNIHAPNLLA 362
Score = 36.3 bits (80), Expect = 0.028
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 4/110 (3%)
Frame = +2
Query: 335 LASAGFDRQILIWNVYGQCENVMVMKGHTGA-IMQLCFSPDGSHLYT-GATDNTVAVWDV 508
L S DR +++ + G+ + +K T A + +L + P H + D TV +D
Sbjct: 273 LLSGSRDRTVVLKD--GRDPSNSGLKWSTEAKVEKLAWDPHSEHSFVVSLKDGTVKGFDT 330
Query: 509 PTGTRIKK--LKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNP 652
+ H + V+S+S P LL + S D ++KLWD P
Sbjct: 331 RASDLSPSFIIHAHDSEVSSISYNIHAPNLLATGSADESVKLWDLSNNQP 380
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 47.6 bits (108), Expect = 1e-05
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 11/129 (8%)
Frame = +2
Query: 404 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAV-WDVPTGTR--IKKLKGHANFVNSVSGA 574
V GH + + FSP + + D++ + WD TGT K K H ++ V
Sbjct: 287 VYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWN 346
Query: 575 RRGPELLVSASDDNTIKLWDARK------RNPVASFDS-SYPVTSVLFN-DTAEKILSSG 730
L+++ S DNT++L+D RK +P+ F+ V V ++ D + SS
Sbjct: 347 PHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSA 406
Query: 731 VDNVIKMWD 757
D ++ +WD
Sbjct: 407 EDGLLNIWD 415
Score = 45.6 bits (103), Expect = 5e-05
Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 6/172 (3%)
Frame = +2
Query: 266 PIMLLEGHQGEI-FTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLC 442
P ++L GHQ F P + S G D+ +++W++ + +G+I++
Sbjct: 211 PDLILTGHQDNAEFALAMCPTEPFVLSGGKDKSVVLWSIQDHITTIGTDSKSSGSIIK-- 268
Query: 443 FSPDGSHLYTG-ATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNT 619
TG TD + P G GH + V V+ + + S DD+
Sbjct: 269 --------QTGEGTDKNESPTVGPRGV----YHGHEDTVEDVAFSPTSAQEFCSVGDDSC 316
Query: 620 IKLWDARK-RNPVASFDSSY--PVTSVLFNDTAEK-ILSSGVDNVIKMWDIR 763
+ LWDAR NPV + ++ + V +N + IL+ DN ++++D R
Sbjct: 317 LILWDARTGTNPVTKVEKAHDADLHCVDWNPHDDNLILTGSADNTVRLFDRR 368
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 47.2 bits (107), Expect = 2e-05
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 7/149 (4%)
Frame = +2
Query: 425 AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK---LKGHANFVNSVSGARRGPEL- 592
++ ++ +SPDGS + + V ++ G +++ + H VN +S + +L
Sbjct: 419 SVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLC 478
Query: 593 LVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVL--FNDTAEKILSSGVDNVIKMWDIR 763
+++ DD TIK+WDA +F+ PV SV + + + I S+ +D IK W
Sbjct: 479 VITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAWLYD 538
Query: 764 NNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
N + T ++ S DG L S
Sbjct: 539 NMGSRVDYDAPGRWCTTMAYSADGTRLFS 567
Score = 40.3 bits (90), Expect = 0.002
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 9/152 (5%)
Frame = +2
Query: 203 VGTREKAVV-TSSVPRTSNLYAPIM--LLEGHQGEIFTAKFHPEGKHLASAGFDRQIL-I 370
VG+RE+ V T V S P+ L++ + + P+G L + R I+ +
Sbjct: 385 VGSRERLVQKTFKVWDLSKCSMPLQAALVKEPVVSVNRVIWSPDGS-LFGVAYSRHIVQL 443
Query: 371 WNVYG--QCENVMVMKGHTGAIMQLCFSPDGSHL--YTGATDNTVAVWDVPTGTRIKKLK 538
++ +G + + H G + + FS L T D T+ VWD TG + +
Sbjct: 444 YSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFE 503
Query: 539 GHANFVNSV-SGARRGPELLVSASDDNTIKLW 631
GH V SV + + + S + D IK W
Sbjct: 504 GHEAPVYSVCPHYKENIQFIFSTALDGKIKAW 535
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/79 (26%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +2
Query: 596 VSASDDNTIKLWDARKRNPVASFDSSYPVTSVL-FNDTAEKILSSGVDN-VIKMWDIRNN 769
V ++ I L++ +A+F P + L F+ I++ G+D+ I+++++R +
Sbjct: 850 VMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVD 909
Query: 770 QIXLKIKGHTDTVTGLSLS 826
++ K+KGH+ +TGL+ S
Sbjct: 910 EVKSKLKGHSKRITGLAFS 928
Score = 33.9 bits (74), Expect = 0.15
Identities = 34/166 (20%), Positives = 67/166 (40%), Gaps = 9/166 (5%)
Frame = +2
Query: 281 EGHQGEIFTAKFHPEG--KHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPD 454
EGH+ +++ H + + + S D +I W +Y + + + +S D
Sbjct: 503 EGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW-LYDNMGSRVDYDAPGRWCTTMAYSAD 561
Query: 455 GSHLYTGAT----DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 622
G+ L++ T ++ + W+ G + +G V ++A DD +I
Sbjct: 562 GTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSI 621
Query: 623 KLWDARKRNPVASFDSSYPVTS---VLFNDTAEKILSSGVDNVIKM 751
K WD + + D + + + FN + SG +NVIK+
Sbjct: 622 KFWDMDAVQLLTAIDGDGGLQASPRIRFNKEGSLLAVSGNENVIKI 667
Score = 31.9 bits (69), Expect = 0.60
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 314 FHPEGKHLASAGFDRQ-ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNT 490
FHP+ ++ + G D I I+NV E +KGH+ I L FS + L + D
Sbjct: 884 FHPQDNNIIAIGMDDSTIQIYNVRVD-EVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQ 942
Query: 491 VAVWD 505
+ VW+
Sbjct: 943 LCVWN 947
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +2
Query: 437 LCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDD 613
L F P D + + G D+T+ +++V KLKGH+ + ++ + +LVS+ D
Sbjct: 882 LAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFS-NVLNVLVSSGAD 940
Query: 614 NTIKLWD 634
+ +W+
Sbjct: 941 AQLCVWN 947
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/57 (22%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 590 LLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWD 757
++ DD+TI++++ R + S +T + F++ ++SSG D + +W+
Sbjct: 891 IIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 947
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 47.2 bits (107), Expect = 2e-05
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 7/149 (4%)
Frame = +2
Query: 425 AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK---LKGHANFVNSVSGARRGPEL- 592
++ ++ +SPDGS + + V ++ G +++ + H VN +S + +L
Sbjct: 419 SVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLC 478
Query: 593 LVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVL--FNDTAEKILSSGVDNVIKMWDIR 763
+++ DD TIK+WDA +F+ PV SV + + + I S+ +D IK W
Sbjct: 479 VITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAWLYD 538
Query: 764 NNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
N + T ++ S DG L S
Sbjct: 539 NMGSRVDYDAPGRWCTTMAYSADGTRLFS 567
Score = 40.3 bits (90), Expect = 0.002
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 9/152 (5%)
Frame = +2
Query: 203 VGTREKAVV-TSSVPRTSNLYAPIM--LLEGHQGEIFTAKFHPEGKHLASAGFDRQIL-I 370
VG+RE+ V T V S P+ L++ + + P+G L + R I+ +
Sbjct: 385 VGSRERLVQKTFKVWDLSKCSMPLQAALVKEPVVSVNRVIWSPDGS-LFGVAYSRHIVQL 443
Query: 371 WNVYG--QCENVMVMKGHTGAIMQLCFSPDGSHL--YTGATDNTVAVWDVPTGTRIKKLK 538
++ +G + + H G + + FS L T D T+ VWD TG + +
Sbjct: 444 YSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFE 503
Query: 539 GHANFVNSV-SGARRGPELLVSASDDNTIKLW 631
GH V SV + + + S + D IK W
Sbjct: 504 GHEAPVYSVCPHYKENIQFIFSTALDGKIKAW 535
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/79 (26%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +2
Query: 596 VSASDDNTIKLWDARKRNPVASFDSSYPVTSVL-FNDTAEKILSSGVDN-VIKMWDIRNN 769
V ++ I L++ +A+F P + L F+ I++ G+D+ I+++++R +
Sbjct: 850 VMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVD 909
Query: 770 QIXLKIKGHTDTVTGLSLS 826
++ K+KGH+ +TGL+ S
Sbjct: 910 EVKSKLKGHSKRITGLAFS 928
Score = 33.9 bits (74), Expect = 0.15
Identities = 34/166 (20%), Positives = 67/166 (40%), Gaps = 9/166 (5%)
Frame = +2
Query: 281 EGHQGEIFTAKFHPEG--KHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPD 454
EGH+ +++ H + + + S D +I W +Y + + + +S D
Sbjct: 503 EGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW-LYDNMGSRVDYDAPGRWCTTMAYSAD 561
Query: 455 GSHLYTGAT----DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 622
G+ L++ T ++ + W+ G + +G V ++A DD +I
Sbjct: 562 GTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSI 621
Query: 623 KLWDARKRNPVASFDSSYPVTS---VLFNDTAEKILSSGVDNVIKM 751
K WD + + D + + + FN + SG +NVIK+
Sbjct: 622 KFWDMDAVQLLTAIDGDGGLQASPRIRFNKEGSLLAVSGNENVIKI 667
Score = 31.9 bits (69), Expect = 0.60
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 314 FHPEGKHLASAGFDRQ-ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNT 490
FHP+ ++ + G D I I+NV E +KGH+ I L FS + L + D
Sbjct: 884 FHPQDNNIIAIGMDDSTIQIYNVRVD-EVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQ 942
Query: 491 VAVWD 505
+ VW+
Sbjct: 943 LCVWN 947
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +2
Query: 437 LCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDD 613
L F P D + + G D+T+ +++V KLKGH+ + ++ + +LVS+ D
Sbjct: 882 LAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFS-NVLNVLVSSGAD 940
Query: 614 NTIKLWD 634
+ +W+
Sbjct: 941 AQLCVWN 947
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/57 (22%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 590 LLVSASDDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWD 757
++ DD+TI++++ R + S +T + F++ ++SSG D + +W+
Sbjct: 891 IIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 947
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); phytochrome
A supressor spa1 (GI:4809171) [Arabidopsis thaliana]
Length = 837
Score = 46.8 bits (106), Expect = 2e-05
Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 9/175 (5%)
Frame = +2
Query: 314 FHPEGKHLASAGFDRQILIW---NVYGQCENV---MVMKGHTGAIMQLCF-SPDGSHLYT 472
F EG+ A+AG +++I I+ ++ ++ +V + LC+ S S + +
Sbjct: 542 FDREGELFATAGVNKKIKIFECNSIVNDNRDIHYPVVELAGRSKLSSLCWNSYIKSQIAS 601
Query: 473 GATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNP 652
D V +WDV + ++K H V S+ + P LL S SDD T
Sbjct: 602 SNFDGVVQIWDVARSQLVTEMKEHKKRVWSIDISSADPTLLASGSDDGT--------GVS 653
Query: 653 VASFDSSYPVTSVLF-NDTAEKILSSGVDNVIKMWDIRNNQIXL-KIKGHTDTVT 811
+ + + V V F +D+ + D+ + +D+RN +I L + GH+ TV+
Sbjct: 654 IGTIKTKANVCCVQFPSDSGRSLAFGSADHKVYYYDLRNPKIPLCTMIGHSKTVS 708
Score = 44.0 bits (99), Expect = 1e-04
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 9/179 (5%)
Frame = +2
Query: 335 LASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVP 511
+AS+ FD + IW+V + + V MK H + + S D + L +G+ D T
Sbjct: 599 IASSNFDGVVQIWDV-ARSQLVTEMKEHKKRVWSIDISSADPTLLASGSDDGT------- 650
Query: 512 TGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK-RNPVASF-DSSYPVT 685
G I +K AN V V L S D+ + +D R + P+ + S V+
Sbjct: 651 -GVSIGTIKTKAN-VCCVQFPSDSGRSLAFGSADHKVYYYDLRNPKIPLCTMIGHSKTVS 708
Query: 686 SVLFNDTAEKILSSGVDNVIKMWDIR------NNQIXLKIKGHTDTVTGLSLSWDGAYL 844
V F D++ ++SS DN +K+WD+ N GHT+ + LS Y+
Sbjct: 709 YVKFVDSST-LVSSSTDNTLKLWDLSMSASGINESPLHSFTGHTNLKNFVGLSVSDGYI 766
Score = 38.3 bits (85), Expect = 0.007
Identities = 32/141 (22%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Frame = +2
Query: 326 GKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 505
G+ LA D ++ +++ + M GH+ + + F D S L + +TDNT+ +WD
Sbjct: 673 GRSLAFGSADHKVYYYDLRNPKIPLCTMIGHSKTVSYVKFV-DSSTLVSSSTDNTLKLWD 731
Query: 506 VPTG------TRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS-- 661
+ + + GH N N V G + + S+ N + ++ PV S
Sbjct: 732 LSMSASGINESPLHSFTGHTNLKNFV-GLSVSDGYIATGSETNEVFVYHKAFPMPVMSYM 790
Query: 662 FDSSYPVTSVLFNDTAEKILS 724
F+++ ++ + +D ++ I S
Sbjct: 791 FNNTDSMSGLEVDDASQFISS 811
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 46.8 bits (106), Expect = 2e-05
Identities = 39/167 (23%), Positives = 75/167 (44%), Gaps = 8/167 (4%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQILI-WNVYGQCENVMVMKGHTGAIMQL----C 442
L+ H G+I + P G D Q L+ W++ ++ V+ + +
Sbjct: 116 LDAHVGKINCVLWCPSGNSDKLISMDEQNLVFWSLDSSKKSAEVLSKESAGMRHSLSGGA 175
Query: 443 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 622
++P + +++++ WD+ T + ++ V +V + +LVSA D++ I
Sbjct: 176 WNPHDVNSVAATSESSIQFWDLRTMKKNNSIE--RAHVRNVDYNLKREHILVSADDESGI 233
Query: 623 KLWDARK-RNPVASFDS-SYPVTSVLFN-DTAEKILSSGVDNVIKMW 754
LWD RK + PV ++ +V N + E ILS G D+ + +W
Sbjct: 234 HLWDLRKTKFPVQELPGHTHWTWAVRCNPEYEELILSVGTDSAVNLW 280
Score = 36.7 bits (81), Expect = 0.021
Identities = 23/110 (20%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Frame = +2
Query: 314 FHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNT- 490
++P + +A + I W++ +N + + H + + ++ H+ A D +
Sbjct: 176 WNPHDVNSVAATSESSIQFWDLRTMKKNNSIERAH---VRNVDYNLKREHILVSADDESG 232
Query: 491 VAVWDV-PTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDA 637
+ +WD+ T +++L GH ++ +V EL++S D+ + LW A
Sbjct: 233 IHLWDLRKTKFPVQELPGHTHWTWAVRCNPEYEELILSVGTDSAVNLWFA 282
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 46.4 bits (105), Expect = 3e-05
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 6/135 (4%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVM--KGHTGAIMQLCFSP 451
LE H+G + T F+ EG L S DR++++W+ Q NV + GH + Q F P
Sbjct: 55 LEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWD--WQLGNVKLSFHSGHANNVFQAKFMP 112
Query: 452 --DGSHLYTGATDNTVAVWDVPTGTRIKK--LKGHANFVNSVSGARRGPELLVSASDDNT 619
D + T A D V + G +++ L H + + P + + +D
Sbjct: 113 FSDDRTIVTCAADGMVRRASILEGDKVETSFLGLHQGRAHKLCIEPGNPHIFYTCGEDGL 172
Query: 620 IKLWDARKRNPVASF 664
++ +D R P F
Sbjct: 173 VQRFDLRTEAPTELF 187
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +2
Query: 527 KKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY 676
KKL+ H VN+VS G ++L+S SDD + LWD + N SF S +
Sbjct: 53 KKLEKHKGCVNTVSFNAEG-DVLISGSDDRRVVLWDWQLGNVKLSFHSGH 101
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/66 (21%), Positives = 32/66 (48%)
Frame = +2
Query: 443 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 622
F P ++ +G+ + +W G I+ ++ + VN + P +L S+ ++ I
Sbjct: 342 FGPRSEYVVSGSDCGRIFIWRKKGGELIRVMEADRHVVNCIEPHPHIP-VLASSGIESDI 400
Query: 623 KLWDAR 640
K+W ++
Sbjct: 401 KVWTSK 406
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 46.4 bits (105), Expect = 3e-05
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 9/125 (7%)
Frame = +2
Query: 284 GHQGEIFTAKFHPEGKHLASAGFDRQ--ILIWNVYGQCENVMVMKGH-------TGAIMQ 436
GHQ ++ A H EG D I +W+ E + K + TG I
Sbjct: 534 GHQDKVM-ALIHIEGTEPVCVSGDGGGGIFVWSTTFPLEEQPLRKWYEPKDWRYTG-IHA 591
Query: 437 LCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDN 616
L +S G H+YTG+ DNT+ W + G+ + + GH + V+++ +L S S D
Sbjct: 592 LAYSEYG-HVYTGSGDNTIKAWSLQDGSLLCTMSGHKSVVSTLVVVN---GVLYSGSWDG 647
Query: 617 TIKLW 631
T++LW
Sbjct: 648 TVRLW 652
Score = 30.7 bits (66), Expect = 1.4
Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 9/102 (8%)
Frame = +2
Query: 599 SASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGV-DNVIKMWDIRNNQI 775
+ S DNTIK W + + + + V S L +L SG D +++W + +N +
Sbjct: 602 TGSGDNTIKAWSLQDGSLLCTMSGHKSVVSTLV--VVNGVLYSGSWDGTVRLWSLSDNSL 659
Query: 776 XLKIKGHT-------DTVTGLSLSWDGAYL-LSINGYTLVXG 877
+ T DT+ +GA L +++NG L G
Sbjct: 660 LTVLGEETPGIIWRDDTLMKSMKIQNGAILSIAVNGKWLFTG 701
Score = 28.7 bits (61), Expect = 5.6
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 11/80 (13%)
Frame = +2
Query: 680 VTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGL--------SLSWDG 835
+ ++ +++ SG DN IK W +++ + + GH V+ L S SWDG
Sbjct: 589 IHALAYSEYGHVYTGSG-DNTIKAWSLQDGSLLCTMSGHKSVVSTLVVVNGVLYSGSWDG 647
Query: 836 A---YLLSINGYTLVXGR*T 886
+ LS N V G T
Sbjct: 648 TVRLWSLSDNSLLTVLGEET 667
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8
WD-40 repeats (PF00400) (2 weak)
Length = 1108
Score = 46.0 bits (104), Expect = 3e-05
Identities = 38/174 (21%), Positives = 73/174 (41%), Gaps = 9/174 (5%)
Frame = +2
Query: 356 RQILIWNVYGQCEN---VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRI 526
R IW++ C + ++ K ++ ++ +SPDG+ + T + + ++ +
Sbjct: 384 RPFKIWDM-SNCSHQFQALIAKETPISVTRVAWSPDGNFIGVAFTKHLIQLYAFSGPNDL 442
Query: 527 KK---LKGHANFVNSVSGARRGPEL-LVSASDDNTIKLWDARKRNPVASFDSSYPVTSVL 694
++ + H VN ++ A +L +++ DD IK+WD R PV S+
Sbjct: 443 RQHTEIDAHVGAVNDLAFANPNRQLCVITCGDDKLIKVWDVSGRKHFTFEGHDAPVYSIC 502
Query: 695 --FNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
+ + + I S+ +D IK W N + T + S DG L S
Sbjct: 503 PHYKENIQFIFSTAIDGKIKAWLYDNLGSRVDYDAPGKWCTRMLYSADGTRLFS 556
Score = 37.1 bits (82), Expect = 0.016
Identities = 38/167 (22%), Positives = 74/167 (44%), Gaps = 9/167 (5%)
Frame = +2
Query: 314 FHPEGKHLASAGF-DRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNT 490
FHP+ ++ + G D I I+NV E +KGH I L FS + L + D
Sbjct: 869 FHPQDNNVIAIGMEDSTIHIYNVRVD-EVKSKLKGHQKRITGLAFSTALNILVSSGADAQ 927
Query: 491 VAVWDVPTGTRIKKLKGHANFVNSVSGARR----GPELLVSASDDNTIKLWDARKRNPVA 658
+ W + T + K + + +G R +L + + + ++DA K +
Sbjct: 928 ICFWSIDTWEKRKSVAIQMPAGKAANGDTRVQFHVDQLRILVVHETQLAVFDASKMECIR 987
Query: 659 SF---DS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKI 787
+ DS S P++S ++ ++ I ++ D I ++D + ++ +I
Sbjct: 988 QWIPQDSLSAPISSAVYACNSQLIYTTFRDGNIGVFDADSLRLRCRI 1034
Score = 33.9 bits (74), Expect = 0.15
Identities = 14/49 (28%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +2
Query: 683 TSVLFNDTAEKILSSGV-DNVIKMWDIRNNQIXLKIKGHTDTVTGLSLS 826
T + F+ +++ G+ D+ I ++++R +++ K+KGH +TGL+ S
Sbjct: 865 TFLAFHPQDNNVIAIGMEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFS 913
Score = 27.9 bits (59), Expect = 9.8
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Frame = +2
Query: 311 KFHPEGKHLASAGFDRQILIWNVYGQCENVMVM---KGHTGAIMQLCFSPDGSHLYTGAT 481
+F H + G D QI W++ NV+ +G A+ L F+ DG+ L
Sbjct: 593 QFDTSKNHFLAVGEDGQIKFWDMNNI--NVLTSTDAEGGLPALPHLRFNKDGNLLAVTTA 650
Query: 482 DNTVAVWDVPTGTR 523
DN + P G R
Sbjct: 651 DNGFKILANPAGFR 664
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 46.0 bits (104), Expect = 3e-05
Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 4/127 (3%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSP-- 451
L+ H+G + T F+ +G L S DRQ+++W+ + GH I Q F P
Sbjct: 51 LDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMPFS 110
Query: 452 DGSHLYTGATDNTVAVWDVPTGTRIKK--LKGHANFVNSVSGARRGPELLVSASDDNTIK 625
D + T A D V + +++ L H V+ ++ P + +D +K
Sbjct: 111 DDRTIVTSAADKQVRYSKILESGQVETSLLGKHQGPVHKLAVEPGSPFSFYTCGEDGAVK 170
Query: 626 LWDARKR 646
+D R R
Sbjct: 171 HFDLRTR 177
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +2
Query: 527 KKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSY 676
KKL H VN+VS G ++L+S SDD + LWD + + SFDS +
Sbjct: 49 KKLDKHKGCVNTVSFNADG-DILLSGSDDRQVILWDWQTASVKLSFDSGH 97
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = +2
Query: 443 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 622
F P ++ +G+ + +W G ++ ++ + VN + P L+ S+ D I
Sbjct: 318 FGPKCEYVVSGSDCGRIFIWRKKDGELLRAMEADRHVVNCIESHPHMP-LMCSSGIDTDI 376
Query: 623 KLW 631
K+W
Sbjct: 377 KIW 379
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 46.0 bits (104), Expect = 3e-05
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 7/149 (4%)
Frame = +2
Query: 425 AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK---LKGHANFVNSVSGARRGPELL 595
++ ++ +SPDGS + + V ++ G +++ + H VN ++ + +L
Sbjct: 419 SVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDIAFSTPNKQLC 478
Query: 596 VSA-SDDNTIKLWDARKRNPVASFDS-SYPVTSVL--FNDTAEKILSSGVDNVIKMWDIR 763
V+ DD TIK+WDA +F+ PV S+ + + + I S+ +D IK W
Sbjct: 479 VTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAWLYD 538
Query: 764 NNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
N + + T ++ S DG L S
Sbjct: 539 NMGSRVDYEAPGRWCTTMAYSADGTRLFS 567
Score = 39.5 bits (88), Expect = 0.003
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 9/152 (5%)
Frame = +2
Query: 203 VGTREKAVV-TSSVPRTSNLYAPIM--LLEGHQGEIFTAKFHPEGKHLASAGFDRQIL-I 370
VG+RE+ V T V S P+ L++ + + P+G L + R I+ +
Sbjct: 385 VGSRERLVQKTFKVWDLSKCSMPLQAALVKEPVVSVNRVIWSPDGS-LFGVAYSRHIVQL 443
Query: 371 WNVYG--QCENVMVMKGHTGAIMQLCFSPDGSHLY--TGATDNTVAVWDVPTGTRIKKLK 538
++ +G + + H G + + FS L T D T+ VWD TG + +
Sbjct: 444 YSYHGGEDMRQHLEIDAHVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFE 503
Query: 539 GHANFVNSV-SGARRGPELLVSASDDNTIKLW 631
GH V S+ + + + S + D IK W
Sbjct: 504 GHEAPVYSICPHYKENIQFIFSTALDGKIKAW 535
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/79 (26%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +2
Query: 596 VSASDDNTIKLWDARKRNPVASFDSSYPVTSVL-FNDTAEKILSSGVDN-VIKMWDIRNN 769
V ++ I L++ +A+F P + L F+ I++ G+D+ I+++++R +
Sbjct: 839 VMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVD 898
Query: 770 QIXLKIKGHTDTVTGLSLS 826
++ K+KGH+ +TGL+ S
Sbjct: 899 EVKSKLKGHSKRITGLAFS 917
Score = 32.7 bits (71), Expect = 0.35
Identities = 33/166 (19%), Positives = 68/166 (40%), Gaps = 9/166 (5%)
Frame = +2
Query: 281 EGHQGEIFTAKFHPEG--KHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPD 454
EGH+ +++ H + + + S D +I W +Y + + + + +S D
Sbjct: 503 EGHEAPVYSICPHYKENIQFIFSTALDGKIKAW-LYDNMGSRVDYEAPGRWCTTMAYSAD 561
Query: 455 GSHLYTGAT----DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 622
G+ L++ T ++ + W+ G + +G V ++A DD +I
Sbjct: 562 GTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSI 621
Query: 623 KLWDARKRNPVASFDSSYPVTS---VLFNDTAEKILSSGVDNVIKM 751
K WD + + D+ + + + FN + S DN+IK+
Sbjct: 622 KFWDMDTIQLLTAIDADGGLQASPRIRFNKEGSLLAVSANDNMIKV 667
Score = 32.3 bits (70), Expect = 0.46
Identities = 37/169 (21%), Positives = 74/169 (43%), Gaps = 11/169 (6%)
Frame = +2
Query: 314 FHPEGKHLASAGFDRQ-ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNT 490
FHP+ ++ + G D I I+NV E +KGH+ I L FS + L + D
Sbjct: 873 FHPQDNNIIAIGMDDSTIQIYNVRVD-EVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQ 931
Query: 491 VAVWDVPTGTRIKKLK----GHANFVNSVSGAR---RGPELLVSASDDNTIKLWDARKRN 649
+ VW+ G +K K +S+S R ++ + + +++ K
Sbjct: 932 LCVWNT-DGWEKQKSKVLQIPQGRSTSSLSDTRVQFHQDQVHFLVVHETQLAIYETTKLE 990
Query: 650 PVASF---DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKI 787
+ + +S+ P+T F+ ++ I +S +D I ++ N ++ ++
Sbjct: 991 CMKQWPVRESAAPITHATFSCDSQLIYTSFMDATICVFSSANLRLRCRV 1039
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +2
Query: 437 LCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDD 613
L F P D + + G D+T+ +++V KLKGH+ + ++ + +LVS+ D
Sbjct: 871 LAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFS-NVLNVLVSSGAD 929
Query: 614 NTIKLWD 634
+ +W+
Sbjct: 930 AQLCVWN 936
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 46.0 bits (104), Expect = 3e-05
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 7/149 (4%)
Frame = +2
Query: 425 AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK---LKGHANFVNSVSGARRGPELL 595
++ ++ +SPDGS + + V ++ G +++ + H VN ++ + +L
Sbjct: 419 SVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDIAFSTPNKQLC 478
Query: 596 VSA-SDDNTIKLWDARKRNPVASFDS-SYPVTSVL--FNDTAEKILSSGVDNVIKMWDIR 763
V+ DD TIK+WDA +F+ PV S+ + + + I S+ +D IK W
Sbjct: 479 VTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAWLYD 538
Query: 764 NNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
N + + T ++ S DG L S
Sbjct: 539 NMGSRVDYEAPGRWCTTMAYSADGTRLFS 567
Score = 39.5 bits (88), Expect = 0.003
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 9/152 (5%)
Frame = +2
Query: 203 VGTREKAVV-TSSVPRTSNLYAPIM--LLEGHQGEIFTAKFHPEGKHLASAGFDRQIL-I 370
VG+RE+ V T V S P+ L++ + + P+G L + R I+ +
Sbjct: 385 VGSRERLVQKTFKVWDLSKCSMPLQAALVKEPVVSVNRVIWSPDGS-LFGVAYSRHIVQL 443
Query: 371 WNVYG--QCENVMVMKGHTGAIMQLCFSPDGSHLY--TGATDNTVAVWDVPTGTRIKKLK 538
++ +G + + H G + + FS L T D T+ VWD TG + +
Sbjct: 444 YSYHGGEDMRQHLEIDAHVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFE 503
Query: 539 GHANFVNSV-SGARRGPELLVSASDDNTIKLW 631
GH V S+ + + + S + D IK W
Sbjct: 504 GHEAPVYSICPHYKENIQFIFSTALDGKIKAW 535
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/79 (26%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +2
Query: 596 VSASDDNTIKLWDARKRNPVASFDSSYPVTSVL-FNDTAEKILSSGVDN-VIKMWDIRNN 769
V ++ I L++ +A+F P + L F+ I++ G+D+ I+++++R +
Sbjct: 839 VMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVD 898
Query: 770 QIXLKIKGHTDTVTGLSLS 826
++ K+KGH+ +TGL+ S
Sbjct: 899 EVKSKLKGHSKRITGLAFS 917
Score = 32.7 bits (71), Expect = 0.35
Identities = 33/166 (19%), Positives = 68/166 (40%), Gaps = 9/166 (5%)
Frame = +2
Query: 281 EGHQGEIFTAKFHPEG--KHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPD 454
EGH+ +++ H + + + S D +I W +Y + + + + +S D
Sbjct: 503 EGHEAPVYSICPHYKENIQFIFSTALDGKIKAW-LYDNMGSRVDYEAPGRWCTTMAYSAD 561
Query: 455 GSHLYTGAT----DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 622
G+ L++ T ++ + W+ G + +G V ++A DD +I
Sbjct: 562 GTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSI 621
Query: 623 KLWDARKRNPVASFDSSYPVTS---VLFNDTAEKILSSGVDNVIKM 751
K WD + + D+ + + + FN + S DN+IK+
Sbjct: 622 KFWDMDTIQLLTAIDADGGLQASPRIRFNKEGSLLAVSANDNMIKV 667
Score = 32.3 bits (70), Expect = 0.46
Identities = 37/169 (21%), Positives = 74/169 (43%), Gaps = 11/169 (6%)
Frame = +2
Query: 314 FHPEGKHLASAGFDRQ-ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNT 490
FHP+ ++ + G D I I+NV E +KGH+ I L FS + L + D
Sbjct: 873 FHPQDNNIIAIGMDDSTIQIYNVRVD-EVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQ 931
Query: 491 VAVWDVPTGTRIKKLK----GHANFVNSVSGAR---RGPELLVSASDDNTIKLWDARKRN 649
+ VW+ G +K K +S+S R ++ + + +++ K
Sbjct: 932 LCVWNT-DGWEKQKSKVLQIPQGRSTSSLSDTRVQFHQDQVHFLVVHETQLAIYETTKLE 990
Query: 650 PVASF---DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKI 787
+ + +S+ P+T F+ ++ I +S +D I ++ N ++ ++
Sbjct: 991 CMKQWPVRESAAPITHATFSCDSQLIYTSFMDATICVFSSANLRLRCRV 1039
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +2
Query: 437 LCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDD 613
L F P D + + G D+T+ +++V KLKGH+ + ++ + +LVS+ D
Sbjct: 871 LAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFS-NVLNVLVSSGAD 929
Query: 614 NTIKLWD 634
+ +W+
Sbjct: 930 AQLCVWN 936
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 46.0 bits (104), Expect = 3e-05
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 7/160 (4%)
Frame = +2
Query: 392 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 571
+NV+ ++ H A+ L + D LY+G+ D T+ VW + ++ ++ H + VN+V
Sbjct: 237 KNVLKIR-HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTVVS 295
Query: 572 ARRGPELLVSASDDNTIKLW----DARKRNPV---ASFDSSYPVTSVLFNDTAEKILSSG 730
+L+ + S D T+K+W ++ V VT++ N T +
Sbjct: 296 G--FDDLVFTGSADGTLKVWKREVQGKEMKHVLVQVLMKQENAVTALAVNLTDAVVYCGS 353
Query: 731 VDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
D + W+ R + K H + L L+ G+ LLS
Sbjct: 354 SDGTVNFWE-RQKYLTHKGTIHGHRMAVLCLATAGSLLLS 392
Score = 28.7 bits (61), Expect = 5.6
Identities = 34/169 (20%), Positives = 69/169 (40%)
Frame = +2
Query: 326 GKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 505
G L + + I +W ++ K +G + + + D + ++TG D + VW
Sbjct: 144 GDLLFTGSDSKNIRVWK---DLKDFSGFKSTSGFVKAIVVTRD-NRVFTGHQDGKIRVW- 198
Query: 506 VPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVT 685
G+ KK + V S+ + L S + N +++ R+R V V+
Sbjct: 199 --RGS--KKNPEKYSRVGSLPTLKEF--LTKSVNPRNYVEV---RRRKNVLKIRHFDAVS 249
Query: 686 SVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWD 832
+ N+ + S D +K+W + +++ I+ H D V + +D
Sbjct: 250 CLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTVVSGFD 298
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 45.6 bits (103), Expect = 5e-05
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Frame = +2
Query: 335 LASAGFDRQILIWNVYGQCENVM--VMKG---HTGAIMQLCFSPDGSHLYTGATDNTVAV 499
LAS ++ IW ++ N V K H ++ L +SPD ++L +G+ DN+ +
Sbjct: 20 LASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCII 79
Query: 500 WDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLW 631
WDV G+ + L H ++V V+ + + S S D T +++
Sbjct: 80 WDVNKGSVHQILDAHCHYVQGVAWDPLA-KYVASLSSDRTCRIY 122
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 45.6 bits (103), Expect = 5e-05
Identities = 30/106 (28%), Positives = 48/106 (45%)
Frame = +2
Query: 440 CFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNT 619
C + +Y+G+ D T+ VW + ++ +K H + +N G G + SAS D
Sbjct: 179 CLAVHAGIIYSGSWDKTLKVWRLSDLKCLESIKAHDDAIN---GLVAGDGRVYSASADGK 235
Query: 620 IKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWD 757
+K+W KR + S SS VL T E V++V+ D
Sbjct: 236 VKIWGKEKRKQIESTSSSSSSLHVL-KATLEGRAEVSVNSVVVSGD 280
Score = 37.9 bits (84), Expect = 0.009
Identities = 47/229 (20%), Positives = 89/229 (38%)
Frame = +2
Query: 194 ISVVGTREKAVVTSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIW 373
+S + + V+ + P + Y P+ +L H G + + G+ L SA + I++W
Sbjct: 29 LSPSASTKSFVLNTLRPPITGAYKPLAVLSAHVGSVSSLALC--GEFLLSASQGKDIIVW 86
Query: 374 NVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANF 553
Q + + K G GS ++T D+ + VW V + +
Sbjct: 87 Q---QPDLKIFAKFGQGDGSVKALVSVGSKVFTAHQDSRIRVWKVSR----RNSENAFRL 139
Query: 554 VNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGV 733
V+++ + L N ++ KR + DS ++ + + A I S
Sbjct: 140 VDTLPTTK--DYLGKFMKQSNYVQTRRNHKRLWIEHADS---ISCLAVH--AGIIYSGSW 192
Query: 734 DNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLSINGYTLVXGR 880
D +K+W + + + IK H D + GL Y S +G + G+
Sbjct: 193 DKTLKVWRLSDLKCLESIKAHDDAINGLVAGDGRVYSASADGKVKIWGK 241
Score = 36.7 bits (81), Expect = 0.021
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Frame = +2
Query: 326 GKHLASAGFDRQILIWN--VYGQCENVMVMKGHTGAIMQLCFSPD----GSHLYTGATDN 487
G+ + S D+ I +W V G V+ GH G + L SP+ G LY+G D
Sbjct: 328 GEMVCSGSADKSIGLWRREVTGMLCKFGVIHGHEGPVKCLQASPNNVGAGFMLYSGGLDK 387
Query: 488 TVAVWDVPTGTRIKKLK 538
++ VW VP +++ K
Sbjct: 388 SLRVWWVPKQDNLEEKK 404
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 45.2 bits (102), Expect = 6e-05
Identities = 30/104 (28%), Positives = 47/104 (45%)
Frame = +2
Query: 443 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTI 622
FS DG L + D+TV + D TG +K L GH V E++ S S D +
Sbjct: 114 FSTDGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWVVRFHPHHSEIVASGSLDLEV 173
Query: 623 KLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 754
+LW+ + S P+ S+ F+ E +L+ + + MW
Sbjct: 174 RLWNTTTSECIRSHLFYRPIASIAFHAEGE-LLAVASGHKLHMW 216
Score = 29.9 bits (64), Expect = 2.4
Identities = 35/164 (21%), Positives = 65/164 (39%), Gaps = 7/164 (4%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHL-ASAGFDRQILIWN-VYGQCENVMVMKGHT--GAIMQ 436
+ +L GH+ + +FHP + AS D ++ +WN +C ++ H I
Sbjct: 141 LKVLTGHRRTPWVVRFHPHHSEIVASGSLDLEVRLWNTTTSEC-----IRSHLFYRPIAS 195
Query: 437 LCFSPDGSHLYTGATDNTVAVWDV---PTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 607
+ F +G L A+ + + +W G+ + + +V G LL++A
Sbjct: 196 IAFHAEG-ELLAVASGHKLHMWHYNRRGEGSSPTVVLKTRRSLRAVHFHPHGAPLLLTA- 253
Query: 608 DDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDN 739
+ N I D+ + YP ++LF T S +N
Sbjct: 254 EVNEIDSLDSSMSRATSMGYLRYPPPAILFTSTESNQTSLAAEN 297
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 44.8 bits (101), Expect = 8e-05
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +2
Query: 530 KLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTA 709
+ +GH V +S ++ L+SAS D T++LW + + F + VTSV FN
Sbjct: 323 EFRGHTGEVLDISWSK--DNYLLSASMDKTVRLWKVGSNDCLGVFAHNSYVTSVQFNPVN 380
Query: 710 EKILSSG-VDNVIKMWDI 760
E SG +D +++W+I
Sbjct: 381 ENYFMSGSIDGKVRIWNI 398
Score = 34.3 bits (75), Expect = 0.11
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNV 379
++ H G I KF +GK LAS+G D + +W V
Sbjct: 217 IKAHDGAILAMKFSNDGKFLASSGEDGIVRVWKV 250
Score = 33.9 bits (74), Expect = 0.15
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 407 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 508
+K H GAI+ + FS DG L + D V VW V
Sbjct: 217 IKAHDGAILAMKFSNDGKFLASSGEDGIVRVWKV 250
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/52 (23%), Positives = 23/52 (44%)
Frame = +2
Query: 419 TGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 574
T ++ + DG H+ + D+ V +W + KK++ F + S A
Sbjct: 503 TRSLTSASLTSDGKHIVSACEDSNVYIWSNDEESETKKIRSFERFSANASVA 554
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 44.8 bits (101), Expect = 8e-05
Identities = 30/129 (23%), Positives = 58/129 (44%), Gaps = 7/129 (5%)
Frame = +2
Query: 392 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 571
+NV+ ++ H A+ L + + LY+G+ D T+ VW + ++ ++ H + +N+V
Sbjct: 241 KNVLKIR-HYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTV-- 297
Query: 572 ARRGPELLVSASDDNTIKLWDARKRNPVAS-------FDSSYPVTSVLFNDTAEKILSSG 730
A +LL + S D T+K+W + VT++ N TA +
Sbjct: 298 AAGFDDLLFTGSADGTLKVWKRELQGKGTKHFLVNVLMKQENAVTALAVNITAAVVYCGS 357
Query: 731 VDNVIKMWD 757
D + W+
Sbjct: 358 SDGTVNFWE 366
Score = 32.7 bits (71), Expect = 0.35
Identities = 28/141 (19%), Positives = 62/141 (43%)
Frame = +2
Query: 410 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 589
K +G + + + D + ++TG D + VW G+ K+ G + + S+ +
Sbjct: 173 KSTSGLVKAIVITGD-NRIFTGHQDGKIRVW---RGS--KRRTGGYSRIGSLPTLKEF-- 224
Query: 590 LLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNN 769
L S + N +++ R+R V V+ + N+ + S D +K+W + ++
Sbjct: 225 LTKSVNPKNYVEV---RRRKNVLKIRHYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDS 281
Query: 770 QIXLKIKGHTDTVTGLSLSWD 832
+ I+ H D + ++ +D
Sbjct: 282 KCLESIQAHDDAINTVAAGFD 302
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 44.8 bits (101), Expect = 8e-05
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
Frame = +2
Query: 446 SPDGSHLYTGATDNTVAVW----DVPTGTRIKKL-KGHANFVNSVSGAR-RGPELLV-SA 604
S DG + TGA D V VW D P G+R +L K V+ R P +++ S
Sbjct: 3339 SHDGRIVVTGAEDGLVCVWRVSKDGPRGSRRLRLEKALCAHTAKVTCLRVSQPYMMIASG 3398
Query: 605 SDDNTIKLWDARKRNPVASF-DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNN 769
SDD T+ +WD + V D P++++ ND +I+++ V+ +W I +
Sbjct: 3399 SDDCTVIIWDLSSLSFVRQLPDFPVPISAIYINDLTGEIVTA-AGTVLAVWSINGD 3453
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 44.4 bits (100), Expect = 1e-04
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 30/205 (14%)
Frame = +2
Query: 284 GHQGEIFTAKFHPEGKHLASAGFDRQILIWNVY--GQCENVMVMKGHTGAIMQLCFSPD- 454
GH+ + + GK +A+A D I I V G + + + GH G + ++ ++
Sbjct: 9 GHEDIVHDVQMDYYGKRIATASSDCTIKITGVSNNGGSQQLATLTGHRGPVWEVAWAHPK 68
Query: 455 -GSHLYTGATDNTVAVW---DVPTGTRIKKLKGHANFVNSVSGARRGPEL-LVSASDDNT 619
GS L + + D V +W + T+ H + VNS++ A L L S D
Sbjct: 69 YGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSIAWAPHDIGLSLACGSSDGN 128
Query: 620 IKLWDARKRN--PVASFDSSYPV--TSVLFN--------------DTAEKILSSGVDNVI 745
I ++ AR + D ++PV TSV + D K+ S G DN +
Sbjct: 129 ISVFTARADGGWDTSRIDQAHPVGVTSVSWAPATAPGALVSSGLLDPVYKLASGGCDNTV 188
Query: 746 KMWDIRNNQIXL----KIKGHTDTV 808
K+W + N + ++ HTD V
Sbjct: 189 KVWKLANGSWKMDCFPALQKHTDWV 213
>At5g58760.1 68418.m07360 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
damage-specific DNA binding protein 2 (GI:10798819)
[Homo sapiens]
Length = 557
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Frame = +2
Query: 584 PELLVSASDDNTIKLWDARKRNPVASF-DSSYP--VTSVLFN-DTAEKILSSGVDNVIKM 751
PELL+S +D+ ++WD RK P AS D ++ V S F+ + KIL++ DN I++
Sbjct: 325 PELLLSCGNDHFARIWDMRKLQPKASLHDLAHKRVVNSAYFSPSSGTKILTTCQDNRIRI 384
Query: 752 WD 757
WD
Sbjct: 385 WD 386
Score = 39.1 bits (87), Expect = 0.004
Identities = 43/177 (24%), Positives = 73/177 (41%), Gaps = 15/177 (8%)
Frame = +2
Query: 287 HQGEIFTAKFHPEGKHLASAGFDR-QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSH 463
H + +FHP ++ +G + QI +W+ E + H+ + + FSP
Sbjct: 170 HSRRVTCLEFHPTKNNILLSGDKKGQIGVWDFGKVYEKNVYGNIHSVQVNNMRFSPTNDD 229
Query: 464 L-YTGATDNTVAVWDVPTGTRIKKLKGH------ANFVNSVSGARRGPELLVSASDDNT- 619
+ Y+ ++D T+ D+ TGT L + AN + G E V + DN
Sbjct: 230 MVYSASSDGTIGYTDLETGTSSTLLNLNPDGWQGANSWKMLYGMDINSEKGVVLAADNFG 289
Query: 620 -IKLWDARKRN----PVASFDSSYPVTSVLFNDTA-EKILSSGVDNVIKMWDIRNNQ 772
+ + D R N P+ V + N E +LS G D+ ++WD+R Q
Sbjct: 290 FLHMIDHRTNNSTGEPILIHKQGSKVCGLDCNPVQPELLLSCGNDHFARIWDMRKLQ 346
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 44.0 bits (99), Expect = 1e-04
Identities = 40/190 (21%), Positives = 75/190 (39%), Gaps = 4/190 (2%)
Frame = +2
Query: 293 GEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCEN-VMVMKGHTGAIMQLCFSPDGSHLY 469
G I + FH + L +AG DR++ + + G+ + + I + F P+GS +
Sbjct: 245 GPINSVHFHQNAQLLLTAGLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKAAFLPNGSQVI 304
Query: 470 TGATDNTVAVWDVPTGT--RIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK 643
+D+ +I L G + + ++ I L +
Sbjct: 305 VSGRRKFFYSFDLEKAKFDKIGPLVGREEKSLEYFEVSQDSNTIAFVGNEGYILLVSTKT 364
Query: 644 RNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTV-TGLS 820
+ + + + V S+ F++ + +LSSG D + +WD+R + K T T L
Sbjct: 365 KELIGTLKMNGSVRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEGSTCGTSLC 424
Query: 821 LSWDGAYLLS 850
S +GA S
Sbjct: 425 SSLNGALFAS 434
Score = 37.1 bits (82), Expect = 0.016
Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 8/118 (6%)
Frame = +2
Query: 422 GAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVS 601
G++ L FS DG HL + D V VWD+ T + K + + + L S
Sbjct: 375 GSVRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEGSTCGTSLCSSLNGALFAS 434
Query: 602 ASDDNTIKLWD-----ARKRNPVASFDS-SYPVTSVLFNDTAE--KILSSGVDNVIKM 751
+D + ++ KR P+ + D+ + + + FN A+ I+S+ N +K+
Sbjct: 435 GTDRGIVNIYKKSEFVGGKRKPIKTVDNLTSKIDFMKFNHDAQILAIVSTMNKNSVKL 492
Score = 36.3 bits (80), Expect = 0.028
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 7/119 (5%)
Frame = +2
Query: 293 GEIFTAKFHPEGKHLASAGFDRQILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLY 469
G + + F +GKHL S+G D Q+ +W++ +C V +G T LC S +G+
Sbjct: 375 GSVRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEGSTCG-TSLCSSLNGALFA 433
Query: 470 TGATDNTVAVWDVP--TGTRIKKLKGHANFVNSVSGARRGPE----LLVSASDDNTIKL 628
+G V ++ G + K +K N + + + + +VS + N++KL
Sbjct: 434 SGTDRGIVNIYKKSEFVGGKRKPIKTVDNLTSKIDFMKFNHDAQILAIVSTMNKNSVKL 492
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 44.0 bits (99), Expect = 1e-04
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 11/136 (8%)
Frame = +2
Query: 437 LCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS---------GARRGPE 589
L S DG +L G + ++D+ + H + S+S +
Sbjct: 391 LAVSEDGKYLAAGDCGGNLHIYDLQESEYTCFMDAHEAEIQSLSFSFPVLTNVDSENASS 450
Query: 590 LLVSASDDNTIKLWDARKR-NPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRN 766
LL S I ++D ++ +PV S S VTSV F K+L+SG D ++M+D+
Sbjct: 451 LLASGGKGRAIHIYDVKRNFDPVGSVCGSAAVTSVKFACNGRKMLTSGADR-LQMFDVNR 509
Query: 767 NQIXLKIK-GHTDTVT 811
+++ HT T++
Sbjct: 510 KASSVRLSPSHTQTLS 525
Score = 35.9 bits (79), Expect = 0.037
Identities = 41/182 (22%), Positives = 80/182 (43%), Gaps = 9/182 (4%)
Frame = +2
Query: 335 LASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 514
LAS G R I I++V + V + G + A+ + F+ +G + T D + ++DV
Sbjct: 452 LASGGKGRAIHIYDVKRNFDPVGSVCG-SAAVTSVKFACNGRKMLTSGADR-LQMFDVNR 509
Query: 515 -GTRIKKLKGHANFVN--SVSGARRGPE--LLVSASDDNTIKLWDARKRNPVASF----D 667
+ ++ H ++ ++ P L+V+ D I ++D V SF D
Sbjct: 510 KASSVRLSPSHTQTLSHGTIYDVAVDPTSGLVVTVGQDKKINIFDIESGKLVRSFKQDRD 569
Query: 668 SSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLL 847
PV V+ + + ++ S + I D ++ + GH + VTG+ D +++
Sbjct: 570 HGDPV-KVILDPSCNYLVCSYSNRTICFVDFVTGELVAQATGHGEAVTGVIFLPDCKHII 628
Query: 848 SI 853
S+
Sbjct: 629 SV 630
Score = 35.9 bits (79), Expect = 0.037
Identities = 35/161 (21%), Positives = 66/161 (40%), Gaps = 7/161 (4%)
Frame = +2
Query: 299 IFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHT-----GAIMQLCFSPDGSH 463
+ + KF G+ + ++G DR + +++V + +V + HT G I + P
Sbjct: 482 VTSVKFACNGRKMLTSGADR-LQMFDVNRKASSVRLSPSHTQTLSHGTIYDVAVDPTSGL 540
Query: 464 LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP-ELLVSASDDNTIKLWDAR 640
+ T D + ++D+ +G ++ K + + V LV + + TI D
Sbjct: 541 VVTVGQDKKINIFDIESGKLVRSFKQDRDHGDPVKVILDPSCNYLVCSYSNRTICFVDFV 600
Query: 641 KRNPVASFDS-SYPVTSVLFNDTAEKILSSGVDNVIKMWDI 760
VA VT V+F + I+S D I +W +
Sbjct: 601 TGELVAQATGHGEAVTGVIFLPDCKHIISVASDGCIFVWKL 641
Score = 33.5 bits (73), Expect = 0.20
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +2
Query: 392 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG-HANFVNSVS 568
E V GH A+ + F PD H+ + A+D + VW +P + ++ + N +V+
Sbjct: 603 ELVAQATGHGEAVTGVIFLPDCKHIISVASDGCIFVWKLPLRMATRIIRAVNENGRLTVA 662
Query: 569 GARRGPELLVSASDDN 616
+ ++ V +DN
Sbjct: 663 QLEKFKQIAVDLEEDN 678
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/116 (20%), Positives = 50/116 (43%), Gaps = 3/116 (2%)
Frame = +2
Query: 293 GEIFTAKFHPEGKHLASAGFDRQILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLY 469
G I+ P + + G D++I I+++ G+ G +++ P ++L
Sbjct: 527 GTIYDVAVDPTSGLVVTVGQDKKINIFDIESGKLVRSFKQDRDHGDPVKVILDPSCNYLV 586
Query: 470 TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL--LVSASDDNTIKLW 631
++ T+ D TG + + GH +V+G P+ ++S + D I +W
Sbjct: 587 CSYSNRTICFVDFVTGELVAQATGHG---EAVTGVIFLPDCKHIISVASDGCIFVW 639
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/112 (22%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Frame = +2
Query: 275 LLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVY-GQCENVMVMKGHTGAIMQLCFSP 451
L+ G E+ KF +GK + + I + + Y G+ + ++ G ++ F+P
Sbjct: 195 LVGGDTAEVNDIKFSNDGKSMLLTTTNNNIYVLDAYRGEKKCGFSLEPSQGTPIEATFTP 254
Query: 452 DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 607
DG ++ +G+ D T+ W++ + + + + + V+ + A R + V+AS
Sbjct: 255 DGKYVLSGSGDGTLHAWNIENPSEVARWENNIGVVSCLKWAPR-RAMFVAAS 305
Score = 43.2 bits (97), Expect = 2e-04
Identities = 37/159 (23%), Positives = 73/159 (45%), Gaps = 9/159 (5%)
Frame = +2
Query: 410 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG--HANFVNSVSGARRG 583
KGH ++ LC SP +G+ D +V +WD+ R+ +G H +V+ ++G
Sbjct: 111 KGHKDRVVSLCMSPINDSFMSGSLDRSVRLWDL----RVNACQGILHLRGRPAVAYDQQG 166
Query: 584 PELLVSASDDNTIKLWDAR--KRNPVASF---DSSYPVTSVLFNDTAEKILSSGVDNVIK 748
+ A + +KL+D+R + P +F + V + F++ + +L + +N I
Sbjct: 167 LVFAI-AMEGGAVKLFDSRCYDKGPFDTFLVGGDTAEVNDIKFSNDGKSMLLTTTNNNIY 225
Query: 749 MWDIRNNQ--IXLKIKGHTDTVTGLSLSWDGAYLLSING 859
+ D + ++ T + + DG Y+LS +G
Sbjct: 226 VLDAYRGEKKCGFSLEPSQGTPIEATFTPDGKYVLSGSG 264
Score = 34.7 bits (76), Expect = 0.086
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Frame = +2
Query: 554 VNSVSGARRGPELLVSASDDNTIKLWD-ARKRNPVASFDSSYPVTSVLFNDTAEKILSSG 730
++SV G R +LLV++S+D++++L+D A + ++ + V F ++ S
Sbjct: 27 IHSV-GFHRTDDLLVTSSEDDSLRLFDIANAKQLKITYHKKHGTDRVCFTHHPSSLICSS 85
Query: 731 VDNV------IKMWDIRNNQIXLKIKGHTDTVTGLSLS 826
N+ ++ + +N+I KGH D V L +S
Sbjct: 86 RYNLESTGESLRYLSMYDNRILRYFKGHKDRVVSLCMS 123
Score = 31.9 bits (69), Expect = 0.60
Identities = 32/172 (18%), Positives = 65/172 (37%), Gaps = 10/172 (5%)
Frame = +2
Query: 281 EGHQGEIFTAKFHPEGKHLASAGFDRQILIWNV-YGQCENVMVMKGHTGAIMQLCFSPDG 457
+GH+ + + P S DR + +W++ C+ ++ ++G + + G
Sbjct: 111 KGHKDRVVSLCMSPINDSFMSGSLDRSVRLWDLRVNACQGILHLRGRPA----VAYDQQG 166
Query: 458 SHLYTGATDNTVAVWDV------PTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNT 619
V ++D P T + + G VN + + G +L++ +++N
Sbjct: 167 LVFAIAMEGGAVKLFDSRCYDKGPFDTFL--VGGDTAEVNDIKFSNDGKSMLLTTTNNN- 223
Query: 620 IKLWDARKRNPVASFD---SSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRN 766
I + DA + F S F + +LS D + W+I N
Sbjct: 224 IYVLDAYRGEKKCGFSLEPSQGTPIEATFTPDGKYVLSGSGDGTLHAWNIEN 275
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/101 (20%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Frame = +2
Query: 395 NVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 574
+ ++ G T + + FS DG + T+N + V D G + + +
Sbjct: 192 DTFLVGGDTAEVNDIKFSNDGKSMLLTTTNNNIYVLDAYRGEKKCGFSLEPSQGTPIEAT 251
Query: 575 -RRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVL 694
+ ++S S D T+ W+ + VA ++++ V S L
Sbjct: 252 FTPDGKYVLSGSGDGTLHAWNIENPSEVARWENNIGVVSCL 292
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 43.6 bits (98), Expect = 2e-04
Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 9/170 (5%)
Frame = +2
Query: 368 IWNVYGQCENVM---VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK-- 532
IWN+ C + ++K + ++ ++ +SPDG+ L T + + V+ G+ +++
Sbjct: 390 IWNM-AACSVIFQGSIVKEPSISVTRVAWSPDGNLLGVSFTKHLIHVYAYQ-GSDLRQHL 447
Query: 533 -LKGHANFVNSVSGARRGPEL-LVSASDDNTIKLWDARKRNPVASFDSSYPVTSVL--FN 700
+ H VN ++ A ++ +V+ DD IK+WD + PV S+
Sbjct: 448 EIDAHVGCVNDLAFAHPNKQMCVVTCGDDKLIKVWDLSGKKLFTFEGHEAPVYSICPHQK 507
Query: 701 DTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
+ + I S+ +D IK W N + T + S DG+ L S
Sbjct: 508 ENIQFIFSTALDGKIKAWLYDNVGSRVDYDAPGQWCTTMLYSADGSRLFS 557
Score = 33.5 bits (73), Expect = 0.20
Identities = 15/49 (30%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +2
Query: 683 TSVLFNDTAEKILSSGV-DNVIKMWDIRNNQIXLKIKGHTDTVTGLSLS 826
T + F+ I++ G+ D+ I ++++R +++ K+KGH +TGL+ S
Sbjct: 876 TFLAFHPQDNNIIAIGMEDSSIHIYNVRVDEVKTKLKGHQKHITGLAFS 924
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 437 LCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDD 613
L F P D + + G D+++ +++V KLKGH + ++ + +LVS+ D
Sbjct: 878 LAFHPQDNNIIAIGMEDSSIHIYNVRVDEVKTKLKGHQKHITGLAFS-TALNILVSSGAD 936
Query: 614 NTIKLWDA 637
+ W A
Sbjct: 937 AQLFFWTA 944
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Frame = +2
Query: 593 LVSASDDNTIKLWDARKRNPVASFDSS-YPVTSVLFNDTAEKILSS---GVDNVIKMWDI 760
+V+ASDD++I+L+D + + +S Y V V F ++ S G D+ +++ +
Sbjct: 48 MVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSRNGWDDSLRLLSL 107
Query: 761 RNNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
+N+ KGH D V LSL G +S
Sbjct: 108 HDNKYLRYFKGHHDRVVSLSLCSGGECFIS 137
Score = 35.1 bits (77), Expect = 0.065
Identities = 30/142 (21%), Positives = 63/142 (44%), Gaps = 5/142 (3%)
Frame = +2
Query: 347 GFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRI 526
G+D + + +++ + + KGH ++ L G +G+ D TV +WD R+
Sbjct: 97 GWDDSLRLLSLHDN-KYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWD----QRV 151
Query: 527 KKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDAR--KRNPVASFDSSYPVTS---V 691
+K +G + A L+ + + I+++DAR ++ P F ++ V
Sbjct: 152 EKCQGLLRVQGRPAAAYDDQGLIFAIAFGGYIRMFDARMYEKGPFEIFSVGGDLSEANVV 211
Query: 692 LFNDTAEKILSSGVDNVIKMWD 757
F++ +L + +D I + D
Sbjct: 212 KFSNDGRLMLLTTMDGFIHVLD 233
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVY-GQCENVMVMKGHTG-AIMQLC 442
I + G E KF +G+ + D I + + + G + +K G + +
Sbjct: 198 IFSVGGDLSEANVVKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVAGESTLDAA 257
Query: 443 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 541
FSP+G + +G+ D + W V +G ++ G
Sbjct: 258 FSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMG 290
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Frame = +2
Query: 593 LVSASDDNTIKLWDARKRNPVASFDSS-YPVTSVLFNDTAEKILSS---GVDNVIKMWDI 760
+V+ASDD++I+L+D + + +S Y V V F ++ S G D+ +++ +
Sbjct: 45 MVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSRNGWDDSLRLLSL 104
Query: 761 RNNQIXLKIKGHTDTVTGLSLSWDGAYLLS 850
+N+ KGH D V LSL G +S
Sbjct: 105 HDNKYLRYFKGHHDRVVSLSLCSGGECFIS 134
Score = 35.1 bits (77), Expect = 0.065
Identities = 30/142 (21%), Positives = 63/142 (44%), Gaps = 5/142 (3%)
Frame = +2
Query: 347 GFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRI 526
G+D + + +++ + + KGH ++ L G +G+ D TV +WD R+
Sbjct: 94 GWDDSLRLLSLHDN-KYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWD----QRV 148
Query: 527 KKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDAR--KRNPVASFDSSYPVTS---V 691
+K +G + A L+ + + I+++DAR ++ P F ++ V
Sbjct: 149 EKCQGLLRVQGRPAAAYDDQGLIFAIAFGGYIRMFDARMYEKGPFEIFSVGGDLSEANVV 208
Query: 692 LFNDTAEKILSSGVDNVIKMWD 757
F++ +L + +D I + D
Sbjct: 209 KFSNDGRLMLLTTMDGFIHVLD 230
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Frame = +2
Query: 269 IMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVY-GQCENVMVMKGHTG-AIMQLC 442
I + G E KF +G+ + D I + + + G + +K G + +
Sbjct: 195 IFSVGGDLSEANVVKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVAGESTLDAA 254
Query: 443 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 541
FSP+G + +G+ D + W V +G ++ G
Sbjct: 255 FSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMG 287
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 43.2 bits (97), Expect = 2e-04
Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Frame = +2
Query: 398 VMVMKGHTGAIMQLCFS-PDGSHLYTGATDNTVAVWDVPTGTRIK---KLKGHANFVNSV 565
V ++ H I L S +GS L++G +D ++ VW+ G I L+GH V +
Sbjct: 252 VAILSEHNSGINALALSGTNGSLLHSGGSDGSILVWERDDGGDIVVVGMLRGHTESVLCL 311
Query: 566 SGARRGPELLVSASDDNTIKLW--DARKRNPVASFDSSY-PVTSVL--FNDTAEK----- 715
+ ++L S S D T++LW A+ + +A + PV + F D+ +
Sbjct: 312 AVVS---DILCSGSADKTVRLWKCSAKDYSCLAMLEGHLGPVKCLTGAFRDSRKADEASY 368
Query: 716 -ILSSGVDNVIKMWDI 760
I S G+D+ +K+W +
Sbjct: 369 HIYSGGLDSQVKVWQV 384
Score = 39.9 bits (89), Expect = 0.002
Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 16/155 (10%)
Frame = +2
Query: 416 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL-KGHANFVNSVSGARRGPEL 592
H A+ L S DG+ LY+ + D T+ +W ++ H + +N+V+ + G
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGD-- 221
Query: 593 LVSASDDNTIKLW----------DARKRNPVASF-DSSYPVTSVLFNDTAEKIL-SSGVD 736
+ + S D IK+W RK + VA + + + ++ + T +L S G D
Sbjct: 222 IYTGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALSGTNGSLLHSGGSD 281
Query: 737 NVIKMW---DIRNNQIXLKIKGHTDTVTGLSLSWD 832
I +W D + + ++GHT++V L++ D
Sbjct: 282 GSILVWERDDGGDIVVVGMLRGHTESVLCLAVVSD 316
Score = 36.7 bits (81), Expect = 0.021
Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Frame = +2
Query: 455 GSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLV-------SASDD 613
G LYTG+ D V +W+ T + + + + + G + LV +A D
Sbjct: 48 GKRLYTGSNDGVVRLWNANTLETLAEASSNGDVITGERGGGGAVKSLVILADKLFTAHQD 107
Query: 614 NTIKLWDARK--RNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKI 787
+ I++W V + T +D K L N + +IR ++ +
Sbjct: 108 HKIRVWKINDVVEEDVGGKKYMHLATMPTISDRFAKCLMP--KNQV---EIRRHKKASWV 162
Query: 788 KGHTDTVTGLSLSWDGAYLLSIN 856
H D V+GL+LS DG L S++
Sbjct: 163 H-HVDAVSGLALSRDGTLLYSVS 184
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 8/48 (16%)
Frame = +2
Query: 260 YAPIMLLEGHQGEI--FTAKFHPEGK------HLASAGFDRQILIWNV 379
Y+ + +LEGH G + T F K H+ S G D Q+ +W V
Sbjct: 337 YSCLAMLEGHLGPVKCLTGAFRDSRKADEASYHIYSGGLDSQVKVWQV 384
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 9/67 (13%)
Frame = +2
Query: 335 LASAGFDRQILIWNVYGQCENVMVM-KGH-------TGAIMQLCFSPDGS-HLYTGATDN 487
L S D+ + +W + + + M +GH TGA + + S H+Y+G D+
Sbjct: 318 LCSGSADKTVRLWKCSAKDYSCLAMLEGHLGPVKCLTGAFRDSRKADEASYHIYSGGLDS 377
Query: 488 TVAVWDV 508
V VW V
Sbjct: 378 QVKVWQV 384
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/98 (25%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Frame = +2
Query: 569 GARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIK 748
GA P + + +L+D R+ ++S+ + + L + ++SS +D ++
Sbjct: 419 GASVSPSWIAAGFSSGQCRLFDLRENGFISSWRAHDGYVTKLVAPESHLLVSSSLDKTLR 478
Query: 749 MWDIRNNQI--XLKIKGHTDTVTGLSLSWDGAYLLSIN 856
+WD+R + +KGH D V+G S+ W G ++SI+
Sbjct: 479 IWDLRKSWTPQPFVVKGHNDGVSGFSI-W-GKDVISIS 514
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/130 (21%), Positives = 54/130 (41%), Gaps = 3/130 (2%)
Frame = +2
Query: 470 TGATDNTVAVWDVPTGT---RIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDAR 640
+ + D + WD+ TGT + K A+ + +V L + + +I W
Sbjct: 8 SSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQLSARNTSGSIFYWSWT 67
Query: 641 KRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLS 820
K P+ ++ N+ ++ G+ I +W++ ++ K GH +VT L
Sbjct: 68 KPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLV 127
Query: 821 LSWDGAYLLS 850
S D + L+S
Sbjct: 128 FSGDDSLLVS 137
Score = 42.3 bits (95), Expect = 4e-04
Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 14/134 (10%)
Frame = +2
Query: 428 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 607
I L + +G++L G + +W+V TG +KK GH V + + LLVS S
Sbjct: 81 IKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFS-GDDSLLVSGS 139
Query: 608 DDNTIKLW-------DARKRNPVASFDSSY-----PVTSVL--FNDTAEKILSSGVDNVI 745
D +I++W D +++ ++ ++ VT ++ + I+SS D
Sbjct: 140 QDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVIDYGGCNAVIISSSEDRTC 199
Query: 746 KMWDIRNNQIXLKI 787
K+W + ++ I
Sbjct: 200 KVWSLSRGKLLKNI 213
Score = 36.7 bits (81), Expect = 0.021
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +2
Query: 323 EGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 502
EG +L G I +W V + + GH ++ L FS D S L +G+ D ++ VW
Sbjct: 89 EGTYLVGGGISGDIYLWEV-ATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVW 147
Query: 503 DV 508
+
Sbjct: 148 SL 149
Score = 31.5 bits (68), Expect = 0.80
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +2
Query: 425 AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 586
AI L + DG+ L +G+ D V VWD P R H + G+R+GP
Sbjct: 265 AITCLAYCADGNLLISGSEDGVVCVWD-PKSLR------HVRTLIHAKGSRKGP 311
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/78 (28%), Positives = 34/78 (43%)
Frame = +2
Query: 644 RNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSL 823
R A D YPV S+ F+ + G D + +WD N + + + +++ LS
Sbjct: 232 RKSEAGRDIVYPVNSIAFHPIYGTFATGGCDGFVNIWDGNNKKRLYQYSKYPTSISALSF 291
Query: 824 SWDGAYLLSINGYTLVXG 877
S DG L + YT G
Sbjct: 292 SRDGQLLAVASSYTFEEG 309
Score = 31.1 bits (67), Expect = 1.1
Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 3/151 (1%)
Frame = +2
Query: 428 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL-VSA 604
I L FS + HL + D V ++DV T + LKG +V + S
Sbjct: 20 ISNLRFSNNSDHLLVSSWDKRVRLYDVSTNS----LKGEFLHGGAVLDCCFHDDFSGFSV 75
Query: 605 SDDNTIK--LWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIX 778
D ++ +++ K + + + D + V V ++ A ++++ D +K WD R
Sbjct: 76 GADYKVRRIVFNVGKEDILGTHDKA--VRCVEYSYAAGQVITGSWDKTVKCWDPRG---- 129
Query: 779 LKIKGHTDTVTGLSLSWDGAYLLSINGYTLV 871
G T G L + Y +S+ G+ LV
Sbjct: 130 --ASGPERTQVGTYLQPERVYSMSLVGHRLV 158
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = +2
Query: 428 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 607
+ + F P TG D V +WD R+ + + ++++S +R G L V++S
Sbjct: 244 VNSIAFHPIYGTFATGGCDGFVNIWDGNNKKRLYQYSKYPTSISALSFSRDGQLLAVASS 303
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 37.9 bits (84), Expect = 0.009
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Frame = +2
Query: 443 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNS---VSGARRGPELLV---SA 604
FS D L T NTV+V+ TG +I L+GH V + V + ++L +A
Sbjct: 15 FSNDAKKLLV-CTGNTVSVFSAATGLQITSLEGHTAPVTTLIVVPASSPAQKILCYCWTA 73
Query: 605 SDDNTIKLWDARKRNPVASFDSSYPVTSVL 694
S D TI+ WD + + D+ P+ S++
Sbjct: 74 SLDGTIRHWDFSGPELLKTIDAQLPIYSMV 103
Score = 35.9 bits (79), Expect(2) = 4e-04
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 416 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR 523
H+ + L FS DG++LY+G + + VW + TG +
Sbjct: 282 HSAEVNVLNFSSDGAYLYSGGREGVLVVWQLDTGKK 317
Score = 25.8 bits (54), Expect(2) = 4e-04
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +2
Query: 206 GTREKAVVTS-SVPRTSNLYAPIMLLEGHQGEIFTA-KFHPEGKHLASAGFDRQILIWNV 379
G R K + VP + +A + H ++ A FHP + +A+ ++LIW
Sbjct: 182 GIRHKCKIHIWDVPSGGSRHAVSRKMTLHHTKVINAFAFHPTERVIAAGDVTGRVLIWRG 241
Query: 380 YG 385
+G
Sbjct: 242 FG 243
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 42.3 bits (95), Expect = 4e-04
Identities = 34/153 (22%), Positives = 62/153 (40%), Gaps = 8/153 (5%)
Frame = +2
Query: 416 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 595
H A+ L + LY+ + D T+ VW + ++ + H + +NSV +L+
Sbjct: 234 HNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSVMSG--FDDLV 291
Query: 596 VSASDDNTIKLWDAR-----KRNPVAS--FDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 754
+ S D T+K+W ++ +A VT++ + + D ++ W
Sbjct: 292 FTGSADGTVKVWKRELQGKGTKHTLAQVLLKQENAVTALAVKSQSSIVYCGSSDGLVNYW 351
Query: 755 DIRNNQIXLKI-KGHTDTVTGLSLSWDGAYLLS 850
+ I KGH V L ++ G LLS
Sbjct: 352 ERSKRSFTGGILKGHKSAVLCLGIA--GNLLLS 382
Score = 32.3 bits (70), Expect = 0.46
Identities = 43/199 (21%), Positives = 79/199 (39%)
Frame = +2
Query: 236 SVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKG 415
+V T+ L I+ EGH I++ G L + + I +W + K
Sbjct: 110 NVLETNGLIGSIVRKEGH---IYSLA--ASGDLLYTGSDSKNIRVWK---NLKEHAGFKS 161
Query: 416 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 595
+G I + G ++TG D + +W V K+ G V ++ + +
Sbjct: 162 SSGLIKAIVIF--GDRIFTGHQDGKIRIWKVS-----KRKPGKHKRVGTLPTFKS----M 210
Query: 596 VSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQI 775
V +S + + R RN V + + V+S+ + + SS D IK+W I +++
Sbjct: 211 VKSSVNPKHFMEVRRNRNSVKTKHND-AVSSLSLDVELGLLYSSSWDTTIKVWRIADSKC 269
Query: 776 XLKIKGHTDTVTGLSLSWD 832
I H D + + +D
Sbjct: 270 LESIHAHDDAINSVMSGFD 288
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 404 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 502
++KGH A+ LC G+ L +G+ D + VW
Sbjct: 362 ILKGHKSAV--LCLGIAGNLLLSGSADKNICVW 392
Score = 28.7 bits (61), Expect = 5.6
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = +2
Query: 404 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK-LKGHANFVNSVSGARR 580
V+ A+ L S +Y G++D V W+ + LKGH + V + A
Sbjct: 319 VLLKQENAVTALAVKSQSSIVYCGSSDGLVNYWERSKRSFTGGILKGHKSAVLCLGIA-- 376
Query: 581 GPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVL 694
LL+S S D I +W +R+P D S+ SVL
Sbjct: 377 -GNLLLSGSADKNICVW---RRDP---SDKSHQCLSVL 407
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 42.3 bits (95), Expect = 4e-04
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Frame = +2
Query: 509 PTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDS--SYPV 682
P G + L+ H + VN ++ + VSASDD+T+K+WD+RK SF S +Y +
Sbjct: 1069 PRGVLVAHLQEHRSAVNDIATSS-DHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHL 1127
Query: 683 -------TSVLFNDTAEKILSSGVDNVIKMWDI 760
T++L N T +++ D VI M+ I
Sbjct: 1128 EGSRGMCTTMLRNST--QVVVGASDGVIHMFSI 1158
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 407 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 505
++ H A+ + S D S + + D+TV VWD
Sbjct: 1077 LQEHRSAVNDIATSSDHSFFVSASDDSTVKVWD 1109
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 42.3 bits (95), Expect = 4e-04
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Frame = +2
Query: 521 RIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLF 697
R +K++ H +V G + +V+AS D +I D VA ++++ + L
Sbjct: 43 RERKVRAHKESCRAVRFIDDG-QRIVTASADCSILATDVETGAQVAHLENAHEDAVNTLI 101
Query: 698 NDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLSING 859
N T I S +K+WD R + H D ++G++ + D L+ +G
Sbjct: 102 NVTETTIASGDDKGCVKIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSG 155
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 41.9 bits (94), Expect = 6e-04
Identities = 31/146 (21%), Positives = 58/146 (39%), Gaps = 9/146 (6%)
Frame = +2
Query: 416 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 595
H A+ L + + LY+ + D T+ VW + ++ + H + VNSV ++
Sbjct: 205 HADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVVSTTEA--IV 262
Query: 596 VSASDDNTIKLWDARKRNPVASF-------DSSYPVTSVLFNDTAEKILSSGVDNVIKMW 754
S S D T+K W ++ VT++ + + D ++ W
Sbjct: 263 FSGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTALAVSKNGAAVYFGSSDGLVNFW 322
Query: 755 DIRNNQIXLK--IKGHTDTVTGLSLS 826
+ R Q+ +KGH V L ++
Sbjct: 323 E-REKQLNYGGILKGHKLAVLCLEVA 347
Score = 39.1 bits (87), Expect = 0.004
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 10/103 (9%)
Frame = +2
Query: 353 DRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW--DVPTGTRI 526
D + W Q ++KGH A+ LC GS +++G+ D T+ VW D T +
Sbjct: 316 DGLVNFWEREKQLNYGGILKGHKLAV--LCLEVAGSLVFSGSADKTICVWKRDGNIHTCL 373
Query: 527 KKLKGHANFVN--SVSGARRGPE------LLVSASDDNTIKLW 631
L GH V +V R E ++ S S D ++K+W
Sbjct: 374 SVLTGHTGPVKCLAVEADREASERRDKKWIVYSGSLDKSVKVW 416
Score = 38.3 bits (85), Expect = 0.007
Identities = 39/165 (23%), Positives = 63/165 (38%), Gaps = 2/165 (1%)
Frame = +2
Query: 329 KHLASAGFD-RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 505
K L G D + I +W + K ++G + + S G ++TG D + VW
Sbjct: 106 KDLLYTGSDSKNIRVWK---NLKEFSAFKCNSGLVKAIVIS--GEKIFTGHQDGKIRVWK 160
Query: 506 V-PTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPV 682
V P + K G + + A P V T LW + D+ V
Sbjct: 161 VSPKNQSLHKRSGTLPTLKDIFKASLKPRNYVEVKKHRT-ALW-------IKHADA---V 209
Query: 683 TSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGL 817
+ + ND + S+ D IK+W I +++ I H D V +
Sbjct: 210 SCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSV 254
Score = 38.3 bits (85), Expect = 0.007
Identities = 37/190 (19%), Positives = 73/190 (38%), Gaps = 8/190 (4%)
Frame = +2
Query: 287 HQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHL 466
H + + E L SA +DR I +W + + + + H A+ + S + +
Sbjct: 205 HADAVSCLSLNDEQGLLYSASWDRTIKVWRI-ADSKCLESIPAHDDAVNSV-VSTTEAIV 262
Query: 467 YTGATDNTVAVW------DVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKL 628
++G+ D TV W T ++ L + V +++ ++ G + +S D +
Sbjct: 263 FSGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTALAVSKNGAAVYFGSS-DGLVNF 321
Query: 629 WDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNN-QIXLKI-KGHTD 802
W+ K+ + + + + S D I +W N L + GHT
Sbjct: 322 WEREKQLNYGGILKGHKLAVLCLEVAGSLVFSGSADKTICVWKRDGNIHTCLSVLTGHTG 381
Query: 803 TVTGLSLSWD 832
V L++ D
Sbjct: 382 PVKCLAVEAD 391
Score = 31.9 bits (69), Expect = 0.60
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Frame = +2
Query: 275 LLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVM-VMKGHTGAIMQLCFSP 451
+L+GH+ + + G + S D+ I +W G + V+ GHTG + L
Sbjct: 333 ILKGHKLAVLCLEV--AGSLVFSGSADKTICVWKRDGNIHTCLSVLTGHTGPVKCLAVEA 390
Query: 452 DGSH---------LYTGATDNTVAVWDV 508
D +Y+G+ D +V VW V
Sbjct: 391 DREASERRDKKWIVYSGSLDKSVKVWGV 418
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/71 (28%), Positives = 31/71 (43%)
Frame = +2
Query: 665 DSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYL 844
D YPV ++ F+ S G D + +WD N + + + ++ LS S DG L
Sbjct: 238 DIVYPVNAIAFHPIYGTFASGGCDGFVNIWDGNNKKRLYQYSKYPTSIAALSFSRDGGLL 297
Query: 845 LSINGYTLVXG 877
+ YT G
Sbjct: 298 AVASSYTFEEG 308
Score = 37.1 bits (82), Expect = 0.016
Identities = 37/164 (22%), Positives = 69/164 (42%), Gaps = 8/164 (4%)
Frame = +2
Query: 299 IFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKG---HTGAIMQLCFSPDGSHLY 469
I +F HL + +D+ + +++ G +M+G H GA++ CF D S +
Sbjct: 19 ISNLRFSNNSDHLLVSSWDKSVRLYDANGD-----LMRGEFKHGGAVLDCCFHDDSSG-F 72
Query: 470 TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDAR--- 640
+ D V D G L H V V + ++ ++ S D TIK WD R
Sbjct: 73 SVCADTKVRRIDFNAGKE-DVLGTHEKPVRCVEYSYAAGQV-ITGSWDKTIKCWDPRGAS 130
Query: 641 --KRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRN 766
+R + ++ V S+ +++ + + ++D+RN
Sbjct: 131 GTERTQIGTYMQPERVNSLSL--VGNRLVVATAGRHVNIYDLRN 172
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 41.1 bits (92), Expect = 0.001
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2
Query: 410 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIK 529
KGHTGA+ + G + +G+TD +V +W+V TG +K
Sbjct: 420 KGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLK 459
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 41.1 bits (92), Expect = 0.001
Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 4/134 (2%)
Frame = +2
Query: 284 GHQGEIFTAKFHPEGKHLASAG-FDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDG- 457
GH+ I +A ++P + G FD + +W+ V+V G + + S
Sbjct: 101 GHKYAISSAIWYPIDTGMFITGSFDHYVKVWDT--NTSQVVVDFKMPGKVYRTAMSSMAM 158
Query: 458 SH--LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLW 631
SH + G D V + D+ +G L GH + V SV + +L + D I+ W
Sbjct: 159 SHTLIAAGTDDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFW 218
Query: 632 DARKRNPVASFDSS 673
D R+ D+S
Sbjct: 219 DIRRAGCFRVLDNS 232
Score = 41.1 bits (92), Expect = 0.001
Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 4/121 (3%)
Frame = +2
Query: 413 GHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHAN-FVNSVSGARRGP 586
GH AI + P D TG+ D+ V VWD T + K + ++S
Sbjct: 101 GHKYAISSAIWYPIDTGMFITGSFDHYVKVWDTNTSQVVVDFKMPGKVYRTAMSSMAMSH 160
Query: 587 ELLVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKIL-SSGVDNVIKMWDI 760
L+ + +DD ++L D + V SV ++ ++E +L + G D I+ WDI
Sbjct: 161 TLIAAGTDDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDI 220
Query: 761 R 763
R
Sbjct: 221 R 221
Score = 36.7 bits (81), Expect = 0.021
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 272 MLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVM 403
++L GH + T F+ + L ++G DRQI++W+ G E+ M
Sbjct: 393 LMLRGHYESVNTCCFNSNDQELYTSGADRQIIVWSPGGSVEDEM 436
Score = 33.1 bits (72), Expect = 0.26
Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 5/118 (4%)
Frame = +2
Query: 416 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG--TRIKKLKGHANFVNSVSGARRGPE 589
H G + L + DG +L + + + + +WD+ +G T + G ++
Sbjct: 311 HYGVVTGLKATNDGMYLLSAGSYSRIRLWDIESGRNTLVNFETGRIQTDRAIQLDTSDDP 370
Query: 590 LLVSASDDNTIK---LWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 754
LV T+K +W R + S V + FN +++ +SG D I +W
Sbjct: 371 ALVFVPCMKTVKGFGMWSGRTTLMLRGHYES--VNTCCFNSNDQELYTSGADRQIIVW 426
Score = 32.7 bits (71), Expect = 0.35
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 401 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGT 520
++++GH ++ CF+ + LYT D + VW P G+
Sbjct: 393 LMLRGHYESVNTCCFNSNDQELYTSGADRQIIVWS-PGGS 431
Score = 31.9 bits (69), Expect = 0.60
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 3/118 (2%)
Frame = +2
Query: 287 HQGEIFTAKFHPEGKHLASAGFDRQILIWNV-YGQCENVMVMKG--HTGAIMQLCFSPDG 457
H G + K +G +L SAG +I +W++ G+ V G T +QL S D
Sbjct: 311 HYGVVTGLKATNDGMYLLSAGSYSRIRLWDIESGRNTLVNFETGRIQTDRAIQLDTSDDP 370
Query: 458 SHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLW 631
+ ++ TV + + +G L+GH VN+ EL S +D I +W
Sbjct: 371 ALVFVPCM-KTVKGFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGADRQII-VW 426
>At3g26480.1 68416.m03301 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (5 copies, 2 below cutoff); related to
LACK protective antigen (GI:13625467) [Leishmania
donovani]
Length = 764
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 12/91 (13%)
Frame = +2
Query: 287 HQGEIFTA-KFHPEGKHLASAGFDRQILIWNVYG-----------QCENVMVMKGHTGAI 430
H E+ T FHP + LA+ ++LIW G E+ H+ +
Sbjct: 190 HHTELITVFAFHPNQRILAAGDVTGRVLIWKDNGIGEFTSVKTEDDTESCTTFNWHSAEV 249
Query: 431 MQLCFSPDGSHLYTGATDNTVAVWDVPTGTR 523
L FS DG+ LY+G VW++ TG +
Sbjct: 250 TVLNFSSDGALLYSGVKAGDFVVWELGTGKK 280
Score = 39.9 bits (89), Expect = 0.002
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Frame = +2
Query: 401 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARR 580
M+ G FS D L T NTV+V+ V TG +I L+ H V SV
Sbjct: 1 MIRGGRNNITSAPAFSKDAKKLLL-CTANTVSVYSVATGLKITSLEDHTAPVTSVIVDPS 59
Query: 581 GPELLV---SASDDNTIKLWDARKRNPVASFDSSYPVTSVL 694
E + ++S D I++W+ + FD+ P+ S++
Sbjct: 60 SDETVSYCWTSSLDGKIRIWEFSAPKLLKIFDTHLPIHSLV 100
>At5g11240.1 68418.m01313 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to uncharacterized protein KIAA0007 (GI:1663708)
{Homo sapiens} 1.2e-11
Length = 615
Score = 40.3 bits (90), Expect = 0.002
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Frame = +2
Query: 416 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 595
H G + + S S +Y+G D V D +G I+K K V+S+ + G ++L
Sbjct: 115 HPGGVNAVSSSAKASCIYSGGADGMVCQIDPHSGNLIRKFKASTKTVSSLCVSPDG-KIL 173
Query: 596 VSASDDNTIKLWDARKRNPVASFDSSYP--VTSVLFNDTAEKILSSGV-DNVIKMW 754
V+AS +K ++ + F + +P V V F + + +LSS V + I +W
Sbjct: 174 VTAS--TQLKTFNCSDLKKIQKF-TGHPGVVRCVAFTEDGKYVLSSAVGERYIAVW 226
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/74 (31%), Positives = 34/74 (45%)
Frame = +2
Query: 410 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 589
K T + LC SPDG L T +T + ++ +I+K GH V V+ G
Sbjct: 155 KASTKTVSSLCVSPDGKILVTASTQ--LKTFNCSDLKKIQKFTGHPGVVRCVAFTEDGKY 212
Query: 590 LLVSASDDNTIKLW 631
+L SA + I +W
Sbjct: 213 VLSSAVGERYIAVW 226
Score = 33.5 bits (73), Expect = 0.20
Identities = 33/132 (25%), Positives = 53/132 (40%), Gaps = 1/132 (0%)
Frame = +2
Query: 458 SHLYTGATDNTVAVWDVPTGTRIKKLKG-HANFVNSVSGARRGPELLVSASDDNTIKLWD 634
S L G V DV +G ++ H VN+VS + + + S D + D
Sbjct: 86 SVLVLGTGGGDVLALDVASGQLKWRISDCHPGGVNAVSSSAKA-SCIYSGGADGMVCQID 144
Query: 635 ARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTG 814
N + F +S S L KIL + +K ++ + + K GH V
Sbjct: 145 PHSGNLIRKFKASTKTVSSLCVSPDGKILVTA-STQLKTFNCSDLKKIQKFTGHPGVVRC 203
Query: 815 LSLSWDGAYLLS 850
++ + DG Y+LS
Sbjct: 204 VAFTEDGKYVLS 215
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 320 PEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGAT-DNTVA 496
P+GK L +A Q+ +N + + GH G + + F+ DG ++ + A + +A
Sbjct: 168 PDGKILVTAS--TQLKTFNC-SDLKKIQKFTGHPGVVRCVAFTEDGKYVLSSAVGERYIA 224
Query: 497 VW 502
VW
Sbjct: 225 VW 226
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 40.3 bits (90), Expect = 0.002
Identities = 27/87 (31%), Positives = 44/87 (50%)
Frame = +2
Query: 197 SVVGTREKAVVTSSVPRTSNLYAPIMLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWN 376
SVVG + TS AP++ ++ H G + + FHP G +A++G +R+I IW+
Sbjct: 252 SVVGLGHSGGTVTMWKPTSQ--APLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWD 309
Query: 377 VYGQCENVMVMKGHTGAIMQLCFSPDG 457
+ + E V + H+ L FS G
Sbjct: 310 L-RKFEEVQTI--HSFHAKTLSFSQKG 333
Score = 35.1 bits (77), Expect = 0.065
Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Frame = +2
Query: 617 TIKLWDARKRNPVASFDSSY-PVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKG 793
T+ +W + P+ PV+SV F+ + +SG + IK+WD+R + I
Sbjct: 262 TVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDLRKFEEVQTI-- 319
Query: 794 HTDTVTGLSLSWDGAYLLSINGYTLVXG 877
H+ LS S G + + G
Sbjct: 320 HSFHAKTLSFSQKGLLAAGTGSFVQILG 347
Score = 31.5 bits (68), Expect = 0.80
Identities = 15/74 (20%), Positives = 35/74 (47%)
Frame = +2
Query: 362 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 541
+ +W Q V M+ H G + + F P+G + T + + +WD+ ++ +
Sbjct: 263 VTMWKPTSQAPLVQ-MQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDLRKFEEVQTI-- 319
Query: 542 HANFVNSVSGARRG 583
H+ ++S +++G
Sbjct: 320 HSFHAKTLSFSQKG 333
>At3g08850.1 68416.m01029 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein mip1
(SP:P87141) [Schizosaccharomyces pombe]; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies, 1 weak)
Length = 1344
Score = 40.3 bits (90), Expect = 0.002
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 21/193 (10%)
Frame = +2
Query: 305 TAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGH---TGAIMQLCF--SPDGSHLY 469
TA HP + +A + +I +WN Y + + H I +LC D S L
Sbjct: 1032 TALLHPFSPIVVAADENERIRVWN-YEEATLLNGFDNHDFPDKGISKLCLINELDDSLLL 1090
Query: 470 TGATDNTVAVWD--VPTG-----TRIKKLKGH---ANFVNSVSGARRGPELLVSASDDNT 619
+ D +V +W G T ++GH A +N+V ++ L ++ + +T
Sbjct: 1091 VASCDGSVRIWKNYATKGKQKLVTGFSSIQGHKPGARDLNAVVDWQQQSGYLYASGETST 1150
Query: 620 IKLWDARKRNPVASF--DSSYPVTSVLFNDTAEKILSSG-VDNVIKMWDIRNNQ-IXLKI 787
+ LWD K V S +S VT++ + L++G D ++++D+R+ + +
Sbjct: 1151 VTLWDLEKEQLVRSVPSESECGVTALSASQVHGGQLAAGFADGSLRLYDVRSPEPLVCAT 1210
Query: 788 KGH--TDTVTGLS 820
+ H + V GLS
Sbjct: 1211 RPHQKVERVVGLS 1223
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 40.3 bits (90), Expect = 0.002
Identities = 32/132 (24%), Positives = 51/132 (38%), Gaps = 2/132 (1%)
Frame = +2
Query: 284 GHQGEIFTAKFHPEGKHLASAG-FDRQILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDG 457
GH+ I +A ++P L G FD + +W+ Q M G +
Sbjct: 101 GHKYAISSAIWYPIDTGLFITGSFDHYLKVWDTNTAQAVVDFKMPGKVYRTAMSSMAMSH 160
Query: 458 SHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDA 637
+ + G D V + D+ +G L GH + V SV + +L + D I+ WD
Sbjct: 161 TLIAAGTEDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDI 220
Query: 638 RKRNPVASFDSS 673
R+ D S
Sbjct: 221 RRAGCFRVLDQS 232
Score = 39.5 bits (88), Expect = 0.003
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Frame = +2
Query: 413 GHTGAIMQLCFSPDGSHLY-TGATDNTVAVWDVPTGTRIKKLKGHAN-FVNSVSGARRGP 586
GH AI + P + L+ TG+ D+ + VWD T + K + ++S
Sbjct: 101 GHKYAISSAIWYPIDTGLFITGSFDHYLKVWDTNTAQAVVDFKMPGKVYRTAMSSMAMSH 160
Query: 587 ELLVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKIL-SSGVDNVIKMWDI 760
L+ + ++D ++L D + V SV ++ ++E +L + G D I+ WDI
Sbjct: 161 TLIAAGTEDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDI 220
Query: 761 R 763
R
Sbjct: 221 R 221
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +2
Query: 272 MLLEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMV 406
++L GH + T F+ + L ++G DRQIL+W+ G E+ MV
Sbjct: 393 LMLRGHYESVNTCCFNSNDQELYTSGSDRQILVWSPGGTVEDEMV 437
Score = 37.5 bits (83), Expect = 0.012
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 3/118 (2%)
Frame = +2
Query: 287 HQGEIFTAKFHPEGKHLASAGFDRQILIWNV-YGQCENVMVMKG--HTGAIMQLCFSPDG 457
H G + K +G +L SAG D +I +W++ G+ V G T +QL S D
Sbjct: 311 HYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRNTLVNFETGRIQTNKGIQLDTSDDP 370
Query: 458 SHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLW 631
+ ++ TV + + +G L+GH VN+ EL S S D I +W
Sbjct: 371 ALVFVPCM-KTVKAFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGS-DRQILVW 426
Score = 37.5 bits (83), Expect = 0.012
Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Frame = +2
Query: 416 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG--TRIKKLKGHANFVNSVSGARRGPE 589
H GA+ L + DG +L + +D+ + +WD+ +G T + G +
Sbjct: 311 HYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRNTLVNFETGRIQTNKGIQLDTSDDP 370
Query: 590 LLVSASDDNTIK---LWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 754
LV T+K +W R + S V + FN +++ +SG D I +W
Sbjct: 371 ALVFVPCMKTVKAFGMWSGRTTLMLRGHYES--VNTCCFNSNDQELYTSGSDRQILVW 426
Score = 34.7 bits (76), Expect = 0.086
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 401 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGT 520
++++GH ++ CF+ + LYT +D + VW P GT
Sbjct: 393 LMLRGHYESVNTCCFNSNDQELYTSGSDRQILVWS-PGGT 431
>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to guanine nucleotide-binding protein beta 5
(GI:1001939) [Mesocricetus auratus]
Length = 425
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +2
Query: 281 EGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGS 460
EG G + T F P + + G Q E + V+ G G + + FS DG+
Sbjct: 209 EGQAGILSTLAFSPTNSGMLAVGSYGQTTGIYREDNMELLYVLHGQEGGVTHVQFSKDGN 268
Query: 461 HLYTGA-TDNTVAVWDVPTGTRI 526
+LYTG D + WD+ I
Sbjct: 269 YLYTGGRKDPYILCWDIRKSVEI 291
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 39.9 bits (89), Expect = 0.002
Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 12/132 (9%)
Frame = +2
Query: 473 GATDNTVAVWDVPTG-----TRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDA 637
G D + +W+ + ++ L H V + + P L S +DD T+ +WD
Sbjct: 86 GLVDGNIGLWNPISSESGEIAHVRDLSKHKGPVRGLEFNVKSPNQLASGADDGTVCIWDL 145
Query: 638 RKRNPVASF---DSSY---PVTSVLFNDTAEKILSSGVDN-VIKMWDIRNNQIXLKIKGH 796
+ + + SY ++S+ +N + +L+S N +WD+ N +I +K
Sbjct: 146 ANPSKPSHYLKGTGSYMQSEISSLSWNKGFQHVLASTSHNGTTVIWDVNNEKIITDLK-- 203
Query: 797 TDTVTGLSLSWD 832
TV L WD
Sbjct: 204 -TTVRCSVLQWD 214
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/113 (23%), Positives = 49/113 (43%), Gaps = 4/113 (3%)
Frame = +2
Query: 299 IFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVM----VMKGHTGAIMQLCFSPDGSHL 466
I + F P+ L + +D Q+ W + ++ V H ++ + DG+ +
Sbjct: 29 ISSLSFSPKADILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCSAWKDDGTTV 88
Query: 467 YTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 625
+TG D +W + +G + + H N ++ G LLV+ S D T+K
Sbjct: 89 FTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQIAWI-PGMNLLVTGSWDKTLK 140
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 39.5 bits (88), Expect = 0.003
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 10/119 (8%)
Frame = +2
Query: 278 LEGHQGEIFTAKF-HPE-GKHLASAGFDRQILIWNV--YGQCENVMVMKGHTGAIMQLCF 445
L GH+G ++ + HP+ G LAS +D QI++W Q V H ++ + +
Sbjct: 52 LTGHRGPVWQVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAW 111
Query: 446 SPD--GSHLYTGATDNTVAVWDVPT--GTRIKKL-KGHANFVNSVSGA-RRGPELLVSA 604
+P G L GA+D ++V+ G K+ + H V SVS A P LVS+
Sbjct: 112 APHELGLSLACGASDGNISVFSARADGGWDTTKIDQAHPVGVTSVSWAPATEPGALVSS 170
Score = 28.3 bits (60), Expect = 7.4
Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 11/108 (10%)
Frame = +2
Query: 464 LYTGATDNTVAVWDVPTGT----RIKKLKGHANFVNSVSGARR---GPELLVSASDDNTI 622
L +G D+TV VW G+ L H ++V V+ A + S S+D +
Sbjct: 179 LASGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKV 238
Query: 623 KLWDARKRNP----VASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMW 754
+W K D PV V ++ T + S +N + +W
Sbjct: 239 IIWTIGKEGEQWEGTVLKDFKTPVWRVSWSLTGNLLAVSDGNNNVTVW 286
>At2g34260.2 68415.m04192 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 296
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +2
Query: 593 LVSASDDNTIKLWDARKRNPVASFDSSYP-VTSVLFNDTAEKILSSGVDNVIKMWDIRNN 769
+V+AS D +I D VA ++++ + L N T I S +K+WD R
Sbjct: 9 IVTASADCSILATDVETGAQVAHLENAHEDAVNTLINVTETTIASGDDKGCVKIWDTRQR 68
Query: 770 QIXLKIKGHTDTVTGLSLSWDGAYLLSING 859
+ H D ++G++ + D L+ +G
Sbjct: 69 SCSHEFNAHEDYISGMTFASDSMKLVVTSG 98
>At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,
putative 99.8% identical to St12p protein (GI:166878)
{Arabidopsis thaliana}
Length = 393
Score = 39.1 bits (87), Expect = 0.004
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Frame = +2
Query: 374 NVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKKLKGHAN 550
N G+ E V+ G + L F+P+GS L GA D T+ V+ P+ T + + + H++
Sbjct: 138 NQAGESEEVIKELRDVGQQLALAFNPEGSVLAAGAEDGTLRVFKWPSMNTLLNESQAHSS 197
Query: 551 FVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVAS 661
V ++ + G + LVS ++WD VAS
Sbjct: 198 -VKCLTFSESG-QFLVSLGGP-VCRVWDVNASAAVAS 231
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +2
Query: 323 EGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDN 487
+GK LA + +LI +V K H G + L FSPD L + + D+
Sbjct: 296 DGKLLAIGTLEGDVLILESTRMQTIQVVKKAHLGLVTALTFSPDSRGLVSVSFDS 350
>At1g65030.1 68414.m07371 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to PAK/PLC-interacting protein 1 (GI:14211689)
[Homo sapiens]
Length = 345
Score = 39.1 bits (87), Expect = 0.004
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 10/78 (12%)
Frame = +2
Query: 437 LCFSP-DGSHLYTGATDNTVAVWDVPTG--------TRIKKLKGHANFV-NSVSGARRGP 586
LC +P + L+TG D + WD +G ++KG N G+ P
Sbjct: 217 LCATPGESGTLFTGGEDRAITAWDTNSGKLAYSIEDAHPARIKGIVVLTRNDSDGSLEDP 276
Query: 587 ELLVSASDDNTIKLWDAR 640
L+ SAS D I++WD R
Sbjct: 277 YLIGSASSDGIIRVWDVR 294
Score = 33.5 bits (73), Expect = 0.20
Identities = 38/181 (20%), Positives = 68/181 (37%), Gaps = 15/181 (8%)
Frame = +2
Query: 266 PIMLLEG---HQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQ 436
P +LL+ H+ + HP GK + D + N+ + GH ++++
Sbjct: 119 PFVLLKSFRPHKKAVNDLAIHPSGKLALAVYRDEFFAMLNLVRGKRSFCCRLGHEASLVK 178
Query: 437 LCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE-LLVSASDD 613
F P G Y N V V + +L+ + + A G L + +D
Sbjct: 179 --FDPSGERFYM-VVSNKVGVHQSEDAKLLLELENPSR--KRILCATPGESGTLFTGGED 233
Query: 614 NTIKLWDARKRNPVASFDSSYP-----VTSVLFNDTAEK------ILSSGVDNVIKMWDI 760
I WD S + ++P + + ND+ I S+ D +I++WD+
Sbjct: 234 RAITAWDTNSGKLAYSIEDAHPARIKGIVVLTRNDSDGSLEDPYLIGSASSDGIIRVWDV 293
Query: 761 R 763
R
Sbjct: 294 R 294
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/61 (24%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Frame = +2
Query: 470 TGATDNTVAVWDVPTGTRIKKL--KGHANFVNSVS----GARRGPELLVSASDDNTIKLW 631
+G +D+T+ ++D+P+ + + L HA + ++S + P L+SA+ D ++ ++
Sbjct: 56 SGGSDDTIHLYDLPSASSLGSLLDHNHAASITALSFYTPSSLSFPRNLISAAADGSVAIF 115
Query: 632 D 634
D
Sbjct: 116 D 116
>At4g21530.1 68417.m03111 transducin family protein / WD-40 repeat
family protein contains 1 WD-40 repeat (PF00400);
similar to anaphase-promoting complex subunit 4
GI:6180011 [Homo sapiens]; supported by EST GB:AU237382
Length = 510
Score = 38.7 bits (86), Expect = 0.005
Identities = 25/83 (30%), Positives = 40/83 (48%)
Frame = +2
Query: 296 EIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTG 475
+I A+++PE LA D +IL+ Q + G + LC+ PDG + G
Sbjct: 26 QIKIAEWNPEKDLLAMVTEDSKILLHRFNWQ-RLWTISPGKP--VTSLCWRPDGKAIAVG 82
Query: 476 ATDNTVAVWDVPTGTRIKKLKGH 544
D T+++ DV G ++ LK H
Sbjct: 83 LEDGTISLHDVENGKLLRNLKPH 105
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 38.3 bits (85), Expect = 0.007
Identities = 34/156 (21%), Positives = 67/156 (42%), Gaps = 14/156 (8%)
Frame = +2
Query: 395 NVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 574
++ + GHT A+ + ++T D+ V +WD+ G I K + +++
Sbjct: 154 SIDTLYGHTEAVRTVFLLASAKLVFTSGYDSIVRMWDMEEGLSIAASKPLGCTIRALAA- 212
Query: 575 RRGPELLVSASDDNTIKLWDA--------------RKRNPVASFDSSYPVTSVLFNDTAE 712
+LLV+ D I W + +++ + P+TS+ + T+
Sbjct: 213 --DTKLLVAGGTDGFIHCWKSLDGLRNLFDLTGFQKEKTEFRLWGHEGPITSLALDMTS- 269
Query: 713 KILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLS 820
I S D +++WD R++ +K H+D V GL+
Sbjct: 270 -IFSGSWDMSVRIWD-RSSMKCVKTLRHSDWVWGLA 303
Score = 34.7 bits (76), Expect = 0.086
Identities = 28/111 (25%), Positives = 44/111 (39%), Gaps = 3/111 (2%)
Frame = +2
Query: 320 PEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAV 499
P LAS + IW+V + ++ H G L S G L+TG D + +
Sbjct: 304 PHETTLASTS-GSDVYIWDVSSETPLAIIPDAHEGTTYSLARSHTGDFLFTGGEDGGIKM 362
Query: 500 WDV---PTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARK 643
+++ + T + + + V LVSAS D + L D RK
Sbjct: 363 FEIRRYGSETSVVLISQWMPHTSPVYSLSFEFPWLVSASGDGKLALIDVRK 413
>At2g26610.1 68415.m03193 expressed protein ; expression supported
by MPSS
Length = 1249
Score = 38.3 bits (85), Expect = 0.007
Identities = 32/140 (22%), Positives = 58/140 (41%), Gaps = 3/140 (2%)
Frame = +2
Query: 299 IFTAKFH--PEGKHLASAGFDRQILIWNV-YGQCENVMVMKGHTGAIMQLCFSPDGSHLY 469
+++AKF P KH+ A F R++ ++++ Y V+ + + + P LY
Sbjct: 244 LYSAKFSFSPHWKHILFATFPRELFVFDLKYEAALYVVALPRGYAKFVDVLPDPSQEFLY 303
Query: 470 TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRN 649
D +++W G ++ L F+ ++ + P LL L + R +
Sbjct: 304 CLHLDGRLSIWRRKEGEQVHVLCAIEEFMPTIGNSVPSPSLLTLLISQLDSTLQNIRTIH 363
Query: 650 PVASFDSSYPVTSVLFNDTA 709
A DSS S FN+ A
Sbjct: 364 SDALLDSSELEISFDFNNDA 383
>At1g29320.1 68414.m03584 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to meiotic recombination protein REC14
(GI:11139242) [Homo sapiens]; similar to unknown protein
GI:13623493 [Homo sapiens]
Length = 468
Score = 38.3 bits (85), Expect = 0.007
Identities = 24/116 (20%), Positives = 53/116 (45%), Gaps = 2/116 (1%)
Frame = +2
Query: 359 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 538
Q+ ++++ Q V+ AI + PDG +Y G +A +D+ TG +
Sbjct: 239 QVRLYDISTQRRPVLSFDFRETAITSIAEDPDGHTIYVGNASADLASFDIRTGKLLGSFL 298
Query: 539 GHANFVNSVSGARRGP--ELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFN 700
G + S+ R P +++ S D ++++D + R +++ +T ++F+
Sbjct: 299 GKCS--GSIRSVVRHPQHQVIASCGLDRYLRVYDVKTRQLISAVFLKQHLTGLVFD 352
Score = 28.3 bits (60), Expect = 7.4
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +2
Query: 293 GEIFTAKFHPEGKHLASAGFDRQILIWNV-YGQCENVMVMKGH-TGAIMQLCFSPDGSHL 466
G I + HP+ + +AS G DR + +++V Q + + +K H TG + FS + +
Sbjct: 303 GSIRSVVRHPQHQVIASCGLDRYLRVYDVKTRQLISAVFLKQHLTGLVFDSGFSGEET-- 360
Query: 467 YTGATDNTVA 496
A NTVA
Sbjct: 361 ---AVANTVA 367
>At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 37.9 bits (84), Expect = 0.009
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Frame = +2
Query: 386 QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKKLKGHANFVNS 562
+ E V+ G + L F+ DG+ L TGA D T+ V++ P+ T + + K HA+ V S
Sbjct: 131 ESEKVVKELKDVGQQLSLSFNQDGTVLATGAEDGTLRVFEWPSMKTLLNESKTHAS-VKS 189
Query: 563 VSGARRGPELLVSASDDNTIKLWDARKRNPVAS 661
++ + G + LVS ++WD +AS
Sbjct: 190 LTFSESG-KFLVSLGAP-LCRVWDVNASAAIAS 220
Score = 31.5 bits (68), Expect = 0.80
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +2
Query: 323 EGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDN 487
+GK LA + +LI + N +V K H G + L FSPD L + + D+
Sbjct: 286 DGKLLAVGTLEGDVLIIDSTKMQTNQIVKKAHLGLVTALTFSPDSRCLVSVSFDS 340
>At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 37.9 bits (84), Expect = 0.009
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Frame = +2
Query: 386 QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKKLKGHANFVNS 562
+ E V+ G + L F+ DG+ L TGA D T+ V++ P+ T + + K HA+ V S
Sbjct: 131 ESEKVVKELKDVGQQLSLSFNQDGTVLATGAEDGTLRVFEWPSMKTLLNESKTHAS-VKS 189
Query: 563 VSGARRGPELLVSASDDNTIKLWDARKRNPVAS 661
++ + G + LVS ++WD +AS
Sbjct: 190 LTFSESG-KFLVSLGAP-LCRVWDVNASAAIAS 220
Score = 31.5 bits (68), Expect = 0.80
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +2
Query: 323 EGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDN 487
+GK LA + +LI + N +V K H G + L FSPD L + + D+
Sbjct: 286 DGKLLAVGTLEGDVLIIDSTKMQTNQIVKKAHLGLVTALTFSPDSRCLVSVSFDS 340
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 37.5 bits (83), Expect = 0.012
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 287 HQGEIFTAKFHPEGKHLASAGFDRQILIWNV 379
H G I KF +GK+LASAG D + +WN+
Sbjct: 256 HDGSIVVMKFSHDGKYLASAGEDCVVRVWNI 286
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 416 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 508
H G+I+ + FS DG +L + D V VW++
Sbjct: 256 HDGSIVVMKFSHDGKYLASAGEDCVVRVWNI 286
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/46 (26%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 716 ILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLS-WDGAYLLS 850
+LSS VD +++W + ++ +++ H VT ++ + D Y +S
Sbjct: 377 LLSSSVDETVRLWRVGSSDECIRVFSHKSFVTCVAFNPVDDNYFIS 422
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 37.5 bits (83), Expect = 0.012
Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 12/134 (8%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDG 457
LEGHQG + ++ G L S D +I IWN + + GHT I F P+
Sbjct: 46 LEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPET 105
Query: 458 SH--LYTGATDNTVAVWDVP-TGTRIKK---------LKGHANFVNSVSGARRGPELLVS 601
S + +GA D V +++ R + + H V ++ P ++ S
Sbjct: 106 SDELVVSGAGDAEVRLFNTSRLSGRAEDDNAIIPSALYQCHTRRVKKLAVEPGNPNVVWS 165
Query: 602 ASDDNTIKLWDARK 643
AS+D T++ D R+
Sbjct: 166 ASEDGTLRQHDFRE 179
Score = 35.9 bits (79), Expect = 0.037
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +2
Query: 527 KKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVT---SVLF 697
++L+GH VN+++ G LL+S SDD I +W+ R + S D+ + +
Sbjct: 44 QELEGHQGCVNALAWNSNG-SLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFV 102
Query: 698 NDTAEKILSSG 730
+T+++++ SG
Sbjct: 103 PETSDELVVSG 113
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Frame = +2
Query: 527 KKLKGHANFVNSVSGA----RRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVL 694
++ GH N + A +RG E + S SDD +W+ + + V + +
Sbjct: 611 RRYVGHCNVGTDIKQASFLGQRG-EYIASGSDDGRWFIWEKQTGRLMKVLVGDESVLNCI 669
Query: 695 FNDTAEKILS-SGVDNVIKMW 754
+ +++ SG+DN IK+W
Sbjct: 670 QCHPFDSVVATSGIDNTIKIW 690
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +2
Query: 326 GKHLASAGFDRQILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 502
G+++AS D + IW G+ V+V G + + P S + T DNT+ +W
Sbjct: 633 GEYIASGSDDGRWFIWEKQTGRLMKVLV--GDESVLNCIQCHPFDSVVATSGIDNTIKIW 690
Query: 503 DVPTGT 520
PT +
Sbjct: 691 S-PTAS 695
>At3g52030.1 68416.m05707 F-box family protein / WD-40 repeat family
protein
Length = 454
Score = 37.1 bits (82), Expect = 0.016
Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Frame = +2
Query: 422 GAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVS 601
G I +CF+ + + G T V+ WD+ R+ + + N V S+ R ++V+
Sbjct: 304 GGIQTICFNQGTNLAFIGTTGGYVSCWDLRKMDRLWEKRVSPNVVYSIQQLRNDTSVMVA 363
Query: 602 ASDDNTIKLWDARKRNPVAS--FDSSYPVTSVLFN 700
D +++ D + ++ D + TS N
Sbjct: 364 GGIDGVLRMIDQKSGRVLSRVIMDDKFSTTSTRNN 398
>At1g69400.2 68414.m07968 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 272
Score = 37.1 bits (82), Expect = 0.016
Identities = 24/116 (20%), Positives = 51/116 (43%)
Frame = +2
Query: 425 AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSA 604
A+ +L FSP ++L + D+ + ++DV + + +L A ++ ++
Sbjct: 15 AVSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAALLDCCF---ENESTSFTS 71
Query: 605 SDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQ 772
D I+ +D TS++++ +++S+G D IK WD R +
Sbjct: 72 GSDGFIRRYDLNAGTVDTIGRHDDISTSIVYSYEKGEVISTGFDEKIKFWDTRQRE 127
>At1g69400.1 68414.m07969 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 314
Score = 37.1 bits (82), Expect = 0.016
Identities = 24/116 (20%), Positives = 51/116 (43%)
Frame = +2
Query: 425 AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSA 604
A+ +L FSP ++L + D+ + ++DV + + +L A ++ ++
Sbjct: 15 AVSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAALLDCCF---ENESTSFTS 71
Query: 605 SDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQ 772
D I+ +D TS++++ +++S+G D IK WD R +
Sbjct: 72 GSDGFIRRYDLNAGTVDTIGRHDDISTSIVYSYEKGEVISTGFDEKIKFWDTRQRE 127
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 36.7 bits (81), Expect = 0.021
Identities = 37/168 (22%), Positives = 67/168 (39%), Gaps = 14/168 (8%)
Frame = +2
Query: 341 SAGFDRQILIWNVYGQ-CENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV--- 508
S D + W G E + H G I L S DG T + D+ V ++DV
Sbjct: 86 SGSMDGHLKFWKKKGVGIEFAKHFRSHLGPIEGLAVSIDGLLCCTISNDHAVKIYDVVNY 145
Query: 509 --PTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDAR--KRNPVASFD-SS 673
R+ + G +V + +L VS D + ++D R P+AS +
Sbjct: 146 DMMAMIRLPYIPGAVEWVYKQGDVK--AKLAVSDRDSLFVHIYDPRSGSNEPIASKEIHM 203
Query: 674 YPVTSVLFNDTAEKILSSGVDNVIKMW-----DIRNNQIXLKIKGHTD 802
P+ + +N ++ ++S +I+ W +++ K+K T+
Sbjct: 204 NPIKVMKYNPVSDTMISGDTKGIIEYWSATTLQFPEDEVNFKLKSDTN 251
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 35.9 bits (79), Expect = 0.037
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Frame = +2
Query: 281 EGHQGEIFTAKFHPEGKHLASAGFDR-QILIWNVYGQCENVMVM---KGHTGAIMQLCFS 448
+GH E++TA F +L G D + W++ + V K HT + + +
Sbjct: 160 KGHDFELWTASFDLNNPNLVYTGSDDCKFSCWDIRDSPADNRVFQNSKVHTMGVCCISSN 219
Query: 449 P-DGSHLYTGATDNTVAVWDVPTGTR 523
P D ++TG+ D T+ VWD + +R
Sbjct: 220 PSDPYSIFTGSYDETLRVWDTRSVSR 245
Score = 30.3 bits (65), Expect = 1.8
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 11/123 (8%)
Frame = +2
Query: 431 MQLC--FSPDGSHLYTGATDNTVAVWDVPTGT--RIKKLKGHANFVNSVSGARRGPELLV 598
M LC + P + + G +D + +V +++ KGH + + S P L+
Sbjct: 121 MCLCLDWDPSSTSIVVGLSDGSASVVSFTDSNLETVQEWKGHDFELWTASFDLNNPNLVY 180
Query: 599 SASDDNTIKLWDARKRNPVAS--FDSS----YPVTSVLFNDT-AEKILSSGVDNVIKMWD 757
+ SDD WD R +P + F +S V + N + I + D +++WD
Sbjct: 181 TGSDDCKFSCWDIRD-SPADNRVFQNSKVHTMGVCCISSNPSDPYSIFTGSYDETLRVWD 239
Query: 758 IRN 766
R+
Sbjct: 240 TRS 242
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 35.1 bits (77), Expect = 0.065
Identities = 26/145 (17%), Positives = 60/145 (41%), Gaps = 7/145 (4%)
Frame = +2
Query: 419 TGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK------GHANFVNSVSGARR 580
+G + + +SPD +++G++D + WD + + ++ G ++ + S
Sbjct: 198 SGRALSVTWSPDAKRIFSGSSDGLIRCWDATSCHEVYRITAGLGGLGSSSEICVWSLLSL 257
Query: 581 GPELLVSASDDNTIKLWDARKRNPV-ASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWD 757
+LVS T++ WD+ + A + V ++ + ++ S+G D + ++
Sbjct: 258 RCSVLVSGDSTGTVQFWDSEHGTLLEAHSNHKGDVNTLAAAPSHNRVFSAGADGQVILYK 317
Query: 758 IRNNQIXLKIKGHTDTVTGLSLSWD 832
+ + G D S WD
Sbjct: 318 LSGS-----TNGSQDLKPSSSQKWD 337
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 35.1 bits (77), Expect = 0.065
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNV-YGQCENVMVMKGHTGAIMQLC--FS 448
L GH ++ F +++AS+ D+ I +W + G C V+ G Q C F
Sbjct: 212 LTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIY-----GISPQYCIRFH 266
Query: 449 P-DGSHLYTGATDNTVAVWDVPTGTRIKKL 535
P + + L G + + V++ TG IKKL
Sbjct: 267 PVNNNFLSAGNANKELTVFNFSTGRIIKKL 296
Score = 34.7 bits (76), Expect = 0.086
Identities = 31/175 (17%), Positives = 70/175 (40%), Gaps = 1/175 (0%)
Frame = +2
Query: 290 QGEIFTAKF-HPEGKHLASAGFDRQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHL 466
+ + KF H LA D + + ++ + + + GH+ + FS + ++
Sbjct: 172 KSSVTVLKFGHMSSDILAYGASDGSLTVCSLLEEPSVLKQLTGHSKDVTDFDFSSNNQYI 231
Query: 467 YTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKR 646
+ + D T+ VW++ G I+ + G ++ R P ++N + +A K
Sbjct: 232 ASSSLDKTIRVWELSRGVCIRVIYG----ISPQYCIRFHP------VNNNFLSAGNANKE 281
Query: 647 NPVASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVT 811
V +F + + +LF D + +I D + + + HT +++
Sbjct: 282 LTVFNFSTGRIIKKLLFEDEVTSMDHDHTGQIIFCGDGQGTVYSVSMDSHTGSLS 336
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 35.1 bits (77), Expect = 0.065
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 6/103 (5%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQILIWNVY----GQCENVMVMK--GHTGAIMQL 439
L+ H + +F + L S DR ++++ G+ + ++ K H I
Sbjct: 643 LQSHSLTVTHLEFSYDDTLLLSVSRDRHFSVFSIQRTDNGEVSHKLMAKVEAHKRIIWAC 702
Query: 440 CFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS 568
++P G T + D TV +W V RIK++ F +SV+
Sbjct: 703 SWNPFGHQFATSSRDKTVKIWSVENDARIKQILVLPPFGSSVT 745
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +2
Query: 743 IKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLSIN 856
I +W++ + +++ H+ TVT L S+D LLS++
Sbjct: 629 IWLWEVGTWKAVGRLQSHSLTVTHLEFSYDDTLLLSVS 666
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 33.9 bits (74), Expect = 0.15
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Frame = +2
Query: 593 LVSASDDNTIKLWDARKRNPVASF--DSSYPVTSVLFNDTAEK----ILSSG--VDNVIK 748
LVS+S D T+K+W RK P+ PV S +F + E+ IL +G ++ IK
Sbjct: 356 LVSSSVDGTVKIWQDRKTQPLVVLRPHDGLPVNSAIFVTSPERPDHIILITGGPLNREIK 415
Query: 749 MW 754
+W
Sbjct: 416 IW 417
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 33.9 bits (74), Expect = 0.15
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 413 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 508
GH + L SPD + L TG+ D+TV +W +
Sbjct: 2666 GHCAPVTCLALSPDNNFLVTGSRDSTVLLWRI 2697
>At3g26640.1 68416.m03329 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to ATAN11 (GI:2290528) [Arabidopsis thaliana]
(Genes Dev. 11 (11), 1422-1434 (1997)); contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies)
Length = 346
Score = 33.5 bits (73), Expect = 0.20
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 266 PIMLLEGHQGEIFTAKFHPEGK-HLASAGFDRQILIWNVYGQCENV 400
P++ L+ HQ + + P H+ SAG D Q LIW++ ++V
Sbjct: 259 PVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMGQHV 304
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 33.5 bits (73), Expect = 0.20
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Frame = +2
Query: 593 LVSASDDNTIKLWDARKRNPVASF--DSSYPVTSVLFNDTAEK----ILSSG--VDNVIK 748
LVS+S D TIK+W RK P+ +PV+S F + E+ IL +G ++ +K
Sbjct: 337 LVSSSVDGTIKIWQDRKAQPLVVLRPHDGHPVSSATFVTSPERPDHIILITGGPLNREMK 396
Query: 749 MW 754
+W
Sbjct: 397 IW 398
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 33.5 bits (73), Expect = 0.20
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Frame = +2
Query: 593 LVSASDDNTIKLWDARKRNPVASF--DSSYPVTSVLFNDTAEK----ILSSG--VDNVIK 748
LVS+S D TIK+W RK P+ +PV+S F + E+ IL +G ++ +K
Sbjct: 372 LVSSSVDGTIKIWQDRKAQPLVVLRPHDGHPVSSATFVTSPERPDHIILITGGPLNREMK 431
Query: 749 MW 754
+W
Sbjct: 432 IW 433
>At1g12910.1 68414.m01499 flower pigmentation protein (AN11)
contains 3 WD-40 repeats (PF00400); identical to
GB:AAC18912 from [Arabidopsis thaliana] (Genes Dev. 11
(11), 1422-1434 (1997))
Length = 346
Score = 33.5 bits (73), Expect = 0.20
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +2
Query: 470 TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDAR-KR 646
T +TD T +WD+ +L H V + A G + S S D +++++D R K
Sbjct: 153 TSSTDTTCTIWDIEREAVDTQLIAHDKEVFDI--AWGGVGVFASVSADGSVRVFDLRDKE 210
Query: 647 NPVASFDSSYPVTSVL 694
+ ++SS P T ++
Sbjct: 211 HSTIIYESSEPDTPLV 226
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 33.5 bits (73), Expect = 0.20
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 15/106 (14%)
Frame = +2
Query: 275 LLEGHQGEIFTA-KFHPEGKHLASAGFDRQILIW-----NVYGQCENVMVMKGHTGAIMQ 436
LL H I T+ +F P+G+++ SA D +I + + G E GH+ I
Sbjct: 149 LLLSHYCSIITSLEFSPDGRYILSADRDFKIRVTVFPKKPLEGAHEIQSFCLGHSEFITC 208
Query: 437 LCF--SPD--GSHLYTGATDNTVAVWDVPTGT-----RIKKLKGHA 547
F +P+ +L +G+ D+TV +WD+ +G+ + + GHA
Sbjct: 209 TAFVSTPELTQGYLMSGSGDSTVRLWDITSGSLLDTCEVSTVAGHA 254
Score = 33.1 bits (72), Expect = 0.26
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 10/91 (10%)
Frame = +2
Query: 392 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-----GTRIKKL-KGHANF 553
+ +++ + I L FSPDG ++ + D + V P I+ GH+ F
Sbjct: 146 KGALLLSHYCSIITSLEFSPDGRYILSADRDFKIRVTVFPKKPLEGAHEIQSFCLGHSEF 205
Query: 554 VNSVSGARRGPEL----LVSASDDNTIKLWD 634
+ + PEL L+S S D+T++LWD
Sbjct: 206 ITCTAFVST-PELTQGYLMSGSGDSTVRLWD 235
Score = 32.3 bits (70), Expect = 0.46
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Frame = +2
Query: 587 ELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSS---GVDNVIKMWD 757
+L VSA DD +K+W A + + S V++V + + + GV VI++
Sbjct: 76 KLFVSAGDDKLVKIWSADSWRCLNTVCSEKRVSAVAISSDDSHVCYADKFGVVWVIELDG 135
Query: 758 IRNNQIXLKIKG------HTDTVTGLSLSWDGAYLLS 850
I + + KG + +T L S DG Y+LS
Sbjct: 136 INDGKTLPSKKGALLLSHYCSIITSLEFSPDGRYILS 172
Score = 29.1 bits (62), Expect = 4.3
Identities = 39/177 (22%), Positives = 74/177 (41%), Gaps = 22/177 (12%)
Frame = +2
Query: 311 KFHPEGKHLASAGFDRQILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDN 487
++ GK SAG D+ + IW+ +C N + + A+ S D SH+ D
Sbjct: 70 RYSTSGKLFVSAGDDKLVKIWSADSWRCLNTVCSEKRVSAV---AISSDDSHVC--YADK 124
Query: 488 TVAVW-----DVPTGTRIKKLKGH---ANFVNSVSGARRGPE--LLVSASDDNTIKLWDA 637
VW + G + KG +++ + ++ P+ ++SA D I++
Sbjct: 125 FGVVWVIELDGINDGKTLPSKKGALLLSHYCSIITSLEFSPDGRYILSADRDFKIRVTVF 184
Query: 638 RKR-----NPVASF--DSSYPVTSVLFNDTAE----KILSSGVDNVIKMWDIRNNQI 775
K+ + + SF S +T F T E ++S D+ +++WDI + +
Sbjct: 185 PKKPLEGAHEIQSFCLGHSEFITCTAFVSTPELTQGYLMSGSGDSTVRLWDITSGSL 241
>At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 33.1 bits (72), Expect = 0.26
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 266 PIMLLEGHQGEIFTAKFHPEG-KHLASAGFDRQILIWNV 379
P+ LE HQ + + P+ KH+ S G D Q LIW +
Sbjct: 256 PVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWEL 294
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/64 (18%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 329 KHLASAGFD-RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDG-SHLYTGATDNTVAVW 502
+++A+ D +++I ++ V ++ H ++ + ++P H+ +G D +W
Sbjct: 233 RYMATILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIW 292
Query: 503 DVPT 514
++PT
Sbjct: 293 ELPT 296
>At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 33.1 bits (72), Expect = 0.26
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 266 PIMLLEGHQGEIFTAKFHPEG-KHLASAGFDRQILIWNV 379
P+ LE HQ + + P+ KH+ S G D Q LIW +
Sbjct: 256 PVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWEL 294
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/64 (18%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 329 KHLASAGFD-RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDG-SHLYTGATDNTVAVW 502
+++A+ D +++I ++ V ++ H ++ + ++P H+ +G D +W
Sbjct: 233 RYMATILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIW 292
Query: 503 DVPT 514
++PT
Sbjct: 293 ELPT 296
>At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 33.1 bits (72), Expect = 0.26
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 266 PIMLLEGHQGEIFTAKFHPEG-KHLASAGFDRQILIWNV 379
P+ LE HQ + + P+ KH+ S G D Q LIW +
Sbjct: 256 PVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWEL 294
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/64 (18%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 329 KHLASAGFD-RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDG-SHLYTGATDNTVAVW 502
+++A+ D +++I ++ V ++ H ++ + ++P H+ +G D +W
Sbjct: 233 RYMATILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIW 292
Query: 503 DVPT 514
++PT
Sbjct: 293 ELPT 296
>At4g31160.1 68417.m04423 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
KIAA0800 protein, Homo sapiens GI:3882321 EMBL:AB018343
Length = 1846
Score = 33.1 bits (72), Expect = 0.26
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +2
Query: 458 SHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG-ARRGPELLVSASDDNTIKLWD 634
+H+ G+ + +++ +G+ ++ + GH V V R +LL+S+S + ++LWD
Sbjct: 1442 NHIAVGSHAGEIKIFEASSGSMLESVSGHQAPVTLVQPYVSRDTQLLLSSSSSD-VQLWD 1500
Query: 635 ARK--RNPVASFD 667
A P SFD
Sbjct: 1501 ASSITGGPRHSFD 1513
>At4g00800.1 68417.m00110 expressed protein contains 1 WD-40 repeat
(PF00400); 42% similarity to fimbriae-associated protein
Fap1 (gi:3929312) [Streptococcus parasanguinis]
Length = 994
Score = 33.1 bits (72), Expect = 0.26
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +2
Query: 668 SSYPVTSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTV 808
S PVTSV FN +L+ D + +WD++ I I HT V
Sbjct: 477 SQSPVTSVCFNQIGSLLLAGYGDGHVTVWDMQRASIAKVITEHTAPV 523
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Frame = +2
Query: 386 QCENVMVMKGHTGA-----IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 544
Q E+ M+ G G + +CF+ GS L G D V VWD+ + K + H
Sbjct: 462 QMESKMIWLGLQGERSQSPVTSVCFNQIGSLLLAGYGDGHVTVWDMQRASIAKVITEH 519
>At1g64350.1 68414.m07292 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to nuclear pore protein SEH1 (SP:P53011)
[Saccharomyces cerevisiae]
Length = 326
Score = 33.1 bits (72), Expect = 0.26
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 278 LEGHQGEIFTAKFHPEGKHLASAGFDRQILIW 373
L GHQGE++ ++ G LAS G D + +W
Sbjct: 276 LSGHQGEVWQMEWDMSGMTLASTGSDGMVKLW 307
>At5g19920.1 68418.m02370 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TipD protein (SP:O15736, PIR:T08602)
[Dictyostelium discoideum]; related to WD-repeat protein
RBAP1 (GI:9716495) [Zea mays]
Length = 656
Score = 32.3 bits (70), Expect = 0.46
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Frame = +2
Query: 425 AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL--KGHANFVNSVSGARRGPELLV 598
A++ +SPDG H+ +G+ D + ++D+ L K H V P LLV
Sbjct: 584 ALINQSWSPDGLHISSGSADPVIHIFDIRYNAPSPSLSMKAHKKRVFKAEWHSSYP-LLV 642
Query: 599 SASDDNTI---KLW 631
S S D I KLW
Sbjct: 643 SISSDLAIGIHKLW 656
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 32.3 bits (70), Expect = 0.46
Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +2
Query: 554 VNSVSGARRGPELLVSASDDNTIKLWDARKRN---PVASFDSSYPVTSVLFNDTAEKILS 724
+ V+ RG L +D + +WD R + D S +TSV ++ ++L
Sbjct: 26 IKCVAFNHRGSLLAAGCADGGCV-IWDFETRGIAKEIRDNDCSAAITSVSWSKYGHRLLV 84
Query: 725 SGVDNVIKMWDIRNNQ 772
S D + +WD+ +
Sbjct: 85 SAADKSLTLWDVSTGE 100
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 31.1 bits (67), Expect = 1.1
Identities = 36/165 (21%), Positives = 71/165 (43%), Gaps = 9/165 (5%)
Frame = +2
Query: 386 QCENVM-VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT--GTRIKKLKGH---A 547
+C++V ++ T + LCF ++ + N + +DV T T K L+ +
Sbjct: 46 RCKDVQFIIDVGTEPVSSLCFKTGNENILYASCGNEIKSFDVHTLSATSWKPLESYNYNK 105
Query: 548 NFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYP--VTSVLFNDTAE-KI 718
+ VN V R L SA D +K+ D ++ + + + +SV F ++
Sbjct: 106 DEVNQVVCNGRS-SFLASADDSGDVKIIDLGQKCLYKTLRAGHTSICSSVQFIPWRPWEV 164
Query: 719 LSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGLSLSWDGAYLLSI 853
++ G+D+ + +WD + I +DT + A++ SI
Sbjct: 165 ITGGLDSKLVLWDFSKGRSQKIIDFGSDTNNNSGQCLNPAFVHSI 209
>At3g33530.1 68416.m04290 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 11
(SP:Q9BZH6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies, 3
weak)|2763187|gb|T46504.1|T46504
Length = 1345
Score = 30.7 bits (66), Expect = 1.4
Identities = 33/175 (18%), Positives = 70/175 (40%), Gaps = 7/175 (4%)
Frame = +2
Query: 314 FHPEGKHLASAGFDRQILIWNV-YGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNT 490
F P K++ F R++L++++ Y + + + + P+ LY G D
Sbjct: 255 FSPHWKNILFVTFPRELLVFDLQYETPLSTTPLPRGCAKFLDILPDPNKELLYCGHVDGR 314
Query: 491 VAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL--VSASDDNTIKLWDARKRNPVASF 664
+++W G ++ + F+ S+ + P L + + D+T++ + +S
Sbjct: 315 LSIWRRKEGEQVHVMCTMEEFMPSIGMSIPSPSALAVLLSHSDSTMQTITKIHPDGTSSI 374
Query: 665 DSSYPV----TSVLFNDTAEKILSSGVDNVIKMWDIRNNQIXLKIKGHTDTVTGL 817
D P S+L + T +S D I W + + +K +D G+
Sbjct: 375 DFDNPFDFYDESLLVSKTT--FISLSDDGKIWKWVLSAEGVEDALKNASDLDMGI 427
>At2g32160.2 68415.m03931 expressed protein
Length = 449
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 666 TVHTQSQVYSSMIQLRKFYPVVWTMSSKCGI 758
T+ T + ++YPV WTM KC I
Sbjct: 416 TIETTYSTNPRSMMKNRYYPVFWTMRKKCAI 446
>At5g51660.1 68418.m06405 cleavage and polyadenylation specificity
factor (CPSF) A subunit C-terminal domain-containing
protein similar to SP|Q9EPU4 Cleavage and polyadenylation
specificity factor, 160 kDa subunit (CPSF 160 kDa
subunit) {Mus musculus}; contains Pfam profile PF03178:
CPSF A subunit region
Length = 1442
Score = 29.5 bits (63), Expect = 3.2
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Frame = +2
Query: 503 DVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPVASFDSSYPV 682
+V T ++LKG + V S+ G LL+S+ + W+ + N VA FD+ P+
Sbjct: 1163 NVVTEVYSRELKGAISAVASIQG-----HLLISSGPKIILHKWNGTELNGVAFFDAP-PL 1216
Query: 683 TSVLFNDTAEKILSSGVDNVIKM--WDIRNNQIXLKIK 790
V N IL V I W + +Q+ L K
Sbjct: 1217 YVVSMNVVKSFILLGDVHKSIYFLSWKEQGSQLSLLAK 1254
>At2g46560.1 68415.m05808 transducin family protein / WD-40 repeat
family protein similar to CPY (GI:3096961) {Chironomus
thummi}; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies, 3 weak)|9780477|gb|BE522499.1|BE522499
Length = 2471
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = +2
Query: 446 SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIK 625
+PDG G + +W +P K H V ++ R L ++ S D +K
Sbjct: 2350 NPDGGSSTDGDQNKNGMLWYIP--------KAHLGSVTKIATIPR-TSLFLTGSKDGEVK 2400
Query: 626 LWDAR 640
LWDA+
Sbjct: 2401 LWDAK 2405
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 404 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 505
+ K H G++ ++ P S TG+ D V +WD
Sbjct: 2370 IPKAHLGSVTKIATIPRTSLFLTGSKDGEVKLWD 2403
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 398 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 508
V ++ H + + + D + L TG+ D TV VWD+
Sbjct: 1039 VQSIRHHKDVVSCVAVTADSTILATGSYDTTVMVWDI 1075
>At1g03380.1 68414.m00317 expressed protein
Length = 926
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +2
Query: 398 VMVMKGHTGAIMQLCFSPDGSHLYTGAT-DNTVAVWDV 508
V K HT I LCF P G+ L T + N + V+ +
Sbjct: 371 VSQFKAHTSPISALCFDPSGTLLVTASVCGNNINVFQI 408
>At5g50970.1 68418.m06321 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 512
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +1
Query: 148 SRGCVPSTLQASTA*DLSSRHQRKGSCYFICSKNIKLVCANYVIG 282
+R P+T++ T+ +SS+H+RK +C N +L + + G
Sbjct: 175 ARNSSPTTIKCHTSNQISSQHKRKLRSLILCPVNEQLFATSSLDG 219
>At1g54710.1 68414.m06237 expressed protein contains 3 WD-40 repeats
(PF00400) (1 weak) submitForm();
Length = 927
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 410 KGHTGAIMQLCFSPDGSHLYTGAT-DNTVAVWDV-PTGTR 523
+ HT I LCF P G+ L T + N + V+ + PT T+
Sbjct: 378 RAHTSPISALCFDPSGTLLVTASIHGNNINVFRIMPTPTK 417
>At3g56970.1 68416.m06340 basic helix-loop-helix (bHLH) family
protein
Length = 253
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 587 ELLVSASDDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKILSSGVDN 739
E+LV S +L+D ++ VAS+ S+ T + N+ ++ SS + N
Sbjct: 136 EILVRVSGQRDFELYDKQQPKAVASYLSTVSATRLGDNEVMVQVSSSKIHN 186
>At3g17150.1 68416.m02188 invertase/pectin methylesterase inhibitor
family protein low similarity to SP|P83326
Pectinesterase inhibitor (Pectin methylesterase
inhibitor) (PMEI) {Actinidia chinensis}; contains Pfam
profile PF04043: Plant invertase/pectin methylesterase
inhibitor
Length = 272
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 656 ASFDSSYPVTSVLFNDTAEKILSSGVDNVIKMWDIR-NNQIXLKIKGHTD 802
A F S P+T L+ND+A++ ++ +++ M + QI ++G D
Sbjct: 144 AQFGGSSPLTGPLYNDSAKETVTKPYASLLSMLILEAKPQIYKNVRGRVD 193
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,098,318
Number of Sequences: 28952
Number of extensions: 432887
Number of successful extensions: 2799
Number of sequences better than 10.0: 255
Number of HSP's better than 10.0 without gapping: 1258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2074
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2149324008
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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