Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_I10
         (890 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    23   2.4  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    23   2.4  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   7.4  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   7.4  

>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +1

Query: 268 EVGSTGFILNGNSLCI 315
           EV S+ F++NG +LC+
Sbjct: 59  EVPSSRFLMNGKALCL 74


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +1

Query: 268 EVGSTGFILNGNSLCI 315
           EV S+ F++NG +LC+
Sbjct: 59  EVPSSRFLMNGKALCL 74


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = +1

Query: 535 MFLQIFYCFFLNIIIIR 585
           + +++ YC +LNI+ +R
Sbjct: 192 LLMELQYCHYLNILRVR 208


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = +1

Query: 535 MFLQIFYCFFLNIIIIR 585
           + +++ YC +LNI+ +R
Sbjct: 192 LLMELQYCHYLNILRVR 208


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,057
Number of Sequences: 336
Number of extensions: 2281
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24720487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)