Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_I09
         (888 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118897-1|AAM50757.1|  566|Drosophila melanogaster LD07633p pro...   123   3e-28
AY113445-1|AAM29450.1| 1524|Drosophila melanogaster RE29777p pro...    33   0.70 
AE013599-2523|AAF57823.2| 1524|Drosophila melanogaster CG10936-P...    33   0.70 
AE013599-2522|AAM68482.1| 1524|Drosophila melanogaster CG10936-P...    33   0.70 

>AY118897-1|AAM50757.1|  566|Drosophila melanogaster LD07633p
           protein.
          Length = 566

 Score =  123 bits (297), Expect = 3e-28
 Identities = 54/114 (47%), Positives = 83/114 (72%)
 Frame = +3

Query: 237 GVAATIIDYSLSRVSLPASAPARCAALYNDLADDDGLFDAVGDYQFEVYRLMKSKLGNDW 416
           GV  TIIDY+LSRV++           +NDL+ D+ LF A GDYQ++VYR+M+++L N+W
Sbjct: 449 GVNVTIIDYTLSRVTI------NDCCYFNDLSRDEELFQATGDYQYDVYRMMRNELKNNW 502

Query: 417 KNFEPYTNILWLHYTVDKMITALRYKRTNTKIHKHYIDKLKGIKNRILDYKSAT 578
            +F P TNI+WL Y + K++ +++YK  NTK+H+ YIDK+K +KN I+ ++SA+
Sbjct: 503 SSFSPKTNIIWLSYVIVKVLDSVKYKSINTKVHRMYIDKIKELKNIIMTFESAS 556



 Score = 59.7 bits (138), Expect = 5e-09
 Identities = 26/47 (55%), Positives = 34/47 (72%)
 Frame = +2

Query: 47  YQFNNAEQAHALFLQVAFGLAVGEEAYQFEHRDLHWGNVLIAPTEQK 187
           ++F N+EQ++    Q+   LAVGEE YQFEHRDLH GN+LI  T +K
Sbjct: 386 FKFLNSEQSYYALQQIILALAVGEEEYQFEHRDLHLGNILIEYTNKK 432


>AY113445-1|AAM29450.1| 1524|Drosophila melanogaster RE29777p
           protein.
          Length = 1524

 Score = 32.7 bits (71), Expect = 0.70
 Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 6/117 (5%)
 Frame = +3

Query: 45  ATSSTTLNKHTRCSSRWHSVWPWARRPTSSSIAICTGETFSSRP------PNKSLPRFVL 206
           A+++TT       SS+ ++ +   R   +S+    T  T S RP      PN   P F+ 
Sbjct: 253 ASTTTTTTSSAEVSSKRYNRFGSNRAKATSTTTSTTQNTPSERPSFGRKSPNPRRPVFIS 312

Query: 207 RGRRHCTPRCGVAATIIDYSLSRVSLPASAPARCAALYNDLADDDGLFDAVGDYQFE 377
           R      P   V+    +YS +R+ LPA   AR  +    + +++ L D   + + E
Sbjct: 313 REVNE--PVSVVSKRPFNYSGARLKLPARPTARTTSTTESVEEEEPLDDEEEEEEHE 367


>AE013599-2523|AAF57823.2| 1524|Drosophila melanogaster CG10936-PB,
           isoform B protein.
          Length = 1524

 Score = 32.7 bits (71), Expect = 0.70
 Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 6/117 (5%)
 Frame = +3

Query: 45  ATSSTTLNKHTRCSSRWHSVWPWARRPTSSSIAICTGETFSSRP------PNKSLPRFVL 206
           A+++TT       SS+ ++ +   R   +S+    T  T S RP      PN   P F+ 
Sbjct: 253 ASTTTTTTSSAEVSSKRYNRFGSNRAKATSTTTSTTQNTPSERPSFGRKSPNPRRPVFIS 312

Query: 207 RGRRHCTPRCGVAATIIDYSLSRVSLPASAPARCAALYNDLADDDGLFDAVGDYQFE 377
           R      P   V+    +YS +R+ LPA   AR  +    + +++ L D   + + E
Sbjct: 313 REVNE--PVSVVSKRPFNYSGARLKLPARPTARTTSTTESVEEEEPLDDEEEEEEHE 367


>AE013599-2522|AAM68482.1| 1524|Drosophila melanogaster CG10936-PA,
           isoform A protein.
          Length = 1524

 Score = 32.7 bits (71), Expect = 0.70
 Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 6/117 (5%)
 Frame = +3

Query: 45  ATSSTTLNKHTRCSSRWHSVWPWARRPTSSSIAICTGETFSSRP------PNKSLPRFVL 206
           A+++TT       SS+ ++ +   R   +S+    T  T S RP      PN   P F+ 
Sbjct: 253 ASTTTTTTSSAEVSSKRYNRFGSNRAKATSTTTSTTQNTPSERPSFGRKSPNPRRPVFIS 312

Query: 207 RGRRHCTPRCGVAATIIDYSLSRVSLPASAPARCAALYNDLADDDGLFDAVGDYQFE 377
           R      P   V+    +YS +R+ LPA   AR  +    + +++ L D   + + E
Sbjct: 313 REVNE--PVSVVSKRPFNYSGARLKLPARPTARTTSTTESVEEEEPLDDEEEEEEHE 367


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,581,342
Number of Sequences: 53049
Number of extensions: 628098
Number of successful extensions: 1521
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1520
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)