Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_I09
         (888 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g09450.1 68414.m01057 haspin-related similar to haspin (GI:92...    74   1e-13
At2g33430.1 68415.m04097 plastid developmental protein DAG, puta...    32   0.58 
At1g79060.1 68414.m09218 expressed protein                             29   4.1  
At5g58590.1 68418.m07342 Ran-binding protein 1, putative / RanBP...    28   7.2  
At3g04220.1 68416.m00446 disease resistance protein (TIR-NBS-LRR...    28   7.2  
At1g06900.1 68414.m00733 peptidase M16 family protein / insulina...    28   7.2  
At2g21850.1 68415.m02596 DC1 domain-containing protein contains ...    28   9.5  

>At1g09450.1 68414.m01057 haspin-related similar to haspin
           (GI:9229937) {Mus musculus} and haploid germ
           cell-specific nuclear protein kinase (GI:13561418) {Mus
           musculus}
          Length = 599

 Score = 73.7 bits (173), Expect = 1e-13
 Identities = 51/146 (34%), Positives = 78/146 (53%), Gaps = 1/146 (0%)
 Frame = +3

Query: 153 GETFSSRPPNKSLPRFVLRGRRHCTPRCGVAATIIDYSLSRVSLPASAPARCAALYNDLA 332
           G    SR  + +LP F+L G++ C    GV  +IID++LSR++           L+ DL 
Sbjct: 452 GNILLSRNNSDTLP-FILEGKQVCIKTFGVQISIIDFTLSRINTGEKI------LFLDLT 504

Query: 333 DDDGLFDAV-GDYQFEVYRLMKSKLGNDWKNFEPYTNILWLHYTVDKMITALRYKRTNTK 509
            D  LF    GD Q E YR MK+   + W+     TN+LWL Y VD ++T   ++R++  
Sbjct: 505 SDPYLFKGPKGDKQSETYRKMKAVTEDYWEGSFARTNVLWLIYLVDILLTKKSFERSS-- 562

Query: 510 IHKHYIDKLKGIKNRILDYKSATDFV 587
             KH   +L+ +K R+  Y+SA + V
Sbjct: 563 --KHE-RELRSLKKRMEKYESAKEAV 585



 Score = 55.2 bits (127), Expect = 5e-08
 Identities = 21/38 (55%), Positives = 30/38 (78%)
 Frame = +2

Query: 59  NAEQAHALFLQVAFGLAVGEEAYQFEHRDLHWGNVLIA 172
           N ++A +L +Q   GLAV E A++FEHRDLHWGN+L++
Sbjct: 420 NFDEARSLLVQATAGLAVAEAAFEFEHRDLHWGNILLS 457


>At2g33430.1 68415.m04097 plastid developmental protein DAG,
           putative similar to DAG protein, chloroplast precursor
           [Garden snapdragon] SWISS-PROT:Q38732
          Length = 219

 Score = 31.9 bits (69), Expect = 0.58
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +3

Query: 81  CSSRWHSVWPWARRPTSSSIAICTGETFSSRPPNKSLPRF 200
           CS+R+ S+   A R  S+   + +G  FS RPP +  P F
Sbjct: 40  CSTRFFSIRCGANRSGSTYSPLNSGSNFSDRPPTEMAPLF 79


>At1g79060.1 68414.m09218 expressed protein
          Length = 396

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = +3

Query: 69  KHTRCSSRWHSVWPWAR--RPTSSSIAICTGETFSSRPPNKSLPRFVLRGRR 218
           K  RCSSRW  +    R  + +S S +  T  T + R    SL +F+ R  R
Sbjct: 116 KAPRCSSRWRDLLGLKRFSQNSSKSASTATTTTTNPRSSTSSLKQFLHRSSR 167


>At5g58590.1 68418.m07342 Ran-binding protein 1, putative / RanBP1,
           putative strong similarity to Ran binding proteins from
           Arabidopsis thaliana atranbp1a [Arabidopsis thaliana]
           GI:2058282, atranbp1b [Arabidopsis thaliana] GI:2058284;
           contains Pfam profile PF00638: RanBP1 domain
          Length = 219

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
 Frame = +3

Query: 351 DAVGDYQFEVYRLMKSKLGNDWKNFEPYTNILWLHYTVDKMITALRYKRTNTKIHKHYID 530
           DAV D + ++YR  K   GN WK     T  L  H    K+   +R  +T      H I 
Sbjct: 46  DAVLDLKSKMYRFDKE--GNQWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLIS 103

Query: 531 KLKGIKNRILDYKS----ATDF 584
               ++    + KS    ATDF
Sbjct: 104 SGMSVQEHSGNEKSCLWHATDF 125


>At3g04220.1 68416.m00446 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 896

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 13/50 (26%), Positives = 23/50 (46%)
 Frame = +3

Query: 396 SKLGNDWKNFEPYTNILWLHYTVDKMITALRYKRTNTKIHKHYIDKLKGI 545
           SKL   W+  +P  N+ WL  T  + +  L    T T + +  I++   +
Sbjct: 684 SKLEKLWEGIQPLRNLEWLDLTCSRNLKELPDLSTATNLQRLSIERCSSL 733


>At1g06900.1 68414.m00733 peptidase M16 family protein / insulinase
           family protein contains Pfam domain, PF05193: Peptidase
           M16 inactive domain; similar to insulin-degrading enzyme
           (Insulysin, Insulinase, Insulin protease) [Mouse]
           SWISS-PROT:Q9JHR7
          Length = 1023

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +2

Query: 650 QLYKMDTLGDVCTCYKNVTYNVHNICF 730
           QL   + LG V  C   +TY VH  CF
Sbjct: 849 QLRTKEQLGYVVECGPRLTYRVHGFCF 875


>At2g21850.1 68415.m02596 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 772

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = -1

Query: 537 SICL-CNACVSLYWFFCSVGPLSFYQQCNVATVCLYMVQSSSNH 409
           S CL C   +  Y + CS   +SF+ +C+ A +  +  Q+S NH
Sbjct: 541 SKCLACKLEIKKYGYHCSTCNISFHIKCSKAVI--FPQQTSHNH 582


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,240,578
Number of Sequences: 28952
Number of extensions: 293930
Number of successful extensions: 903
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 902
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2081245872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)