Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_I06
(905 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 270 8e-73
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 270 8e-73
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 103 3e-22
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 98 7e-21
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 98 7e-21
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 84 1e-16
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 9e-16
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 4e-15
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 73 2e-13
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 7e-13
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 69 7e-12
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 2e-11
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 66 4e-11
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 4e-11
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 66 4e-11
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 61 1e-09
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 9e-08
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 54 2e-07
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6) 44 2e-04
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 40 0.003
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 40 0.004
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 39 0.005
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 37 0.026
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 36 0.045
SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.10
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_27891| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.42
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.42
SB_48450| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_39745| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 270 bits (663), Expect = 8e-73
Identities = 123/147 (83%), Positives = 137/147 (93%)
Frame = +3
Query: 207 KKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKS 386
KK+VKG+YVSIHSSGFRDFLLKPE+LRAIVDCGFEHPSEVQHECIPQA+LGMDI+CQAKS
Sbjct: 34 KKDVKGTYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKS 93
Query: 387 GMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGG 566
GMGKTAVFVLATLQQLEP + V VLVMCHTRELAFQI KEYERF KYMS ++++VFFGG
Sbjct: 94 GMGKTAVFVLATLQQLEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGG 153
Query: 567 MPIQKDEEVLKTACPHIVVGTPGRILA 647
+ I+KD++ LKT CPHIVVGTPGRILA
Sbjct: 154 INIKKDQQTLKTNCPHIVVGTPGRILA 180
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +1
Query: 697 LDECDKMLESLDM 735
LDECDKMLE LD+
Sbjct: 197 LDECDKMLEQLDL 209
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 270 bits (663), Expect = 8e-73
Identities = 123/147 (83%), Positives = 137/147 (93%)
Frame = +3
Query: 207 KKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKS 386
KK+VKG+YVSIHSSGFRDFLLKPE+LRAIVDCGFEHPSEVQHECIPQA+LGMDI+CQAKS
Sbjct: 34 KKDVKGTYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKS 93
Query: 387 GMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGG 566
GMGKTAVFVLATLQQLEP + V VLVMCHTRELAFQI KEYERF KYMS ++++VFFGG
Sbjct: 94 GMGKTAVFVLATLQQLEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGG 153
Query: 567 MPIQKDEEVLKTACPHIVVGTPGRILA 647
+ I+KD++ LKT CPHIVVGTPGRILA
Sbjct: 154 INIKKDQQTLKTNCPHIVVGTPGRILA 180
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 103 bits (246), Expect = 3e-22
Identities = 48/130 (36%), Positives = 77/130 (59%)
Frame = +3
Query: 252 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 431
F LL P +LR + + GFE PS +Q + IP G+D++ QAKSG GKT VF + L+
Sbjct: 15 FHSLLLSPTLLRGLNEAGFEKPSPIQLKAIPLGRCGLDLIAQAKSGTGKTCVFSVIALEN 74
Query: 432 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 611
+ + + ++++ TRE+A Q+ + G+ VF GG+ +++D++ LK+
Sbjct: 75 VITESNCIQIIILTPTREIAVQVKDVICAIGCHYDGLACKVFIGGISLEEDKKALKSC-- 132
Query: 612 HIVVGTPGRI 641
HI VGTPGR+
Sbjct: 133 HIAVGTPGRV 142
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +1
Query: 697 LDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKFMQDP 852
LDE DK+L+ ++ + IF P KQ+M FSAT + + KK+M +P
Sbjct: 161 LDEADKLLDE-SFQQQINWIFSALPENKQMMAFSATYPEVLANHLKKYMTEP 211
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 98.3 bits (234), Expect = 7e-21
Identities = 52/137 (37%), Positives = 82/137 (59%), Gaps = 6/137 (4%)
Frame = +3
Query: 252 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 431
F D+ LK E+L I + GF+ PS +Q E IP A+ G DIL +AK+G GKTA +++ L++
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 432 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD------EEV 593
+ +++ + LV+ TRELA Q S+ K+M G +V V GG ++ D +++
Sbjct: 109 TDTTKNCIQALVLVPTRELALQTSQICIELGKHM-GAQVMVTTGGTSLKDDILRLYNKDI 167
Query: 594 LKTACPHIVVGTPGRIL 644
H++V TPGR+L
Sbjct: 168 FVHVVVHVIVATPGRVL 184
Score = 46.0 bits (104), Expect = 4e-05
Identities = 20/62 (32%), Positives = 40/62 (64%)
Frame = +1
Query: 697 LDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKFMQDPMEVM*MMK 876
+DE DK+L S+D ++ +++I ++ P +Q+++FSAT +R +K ++ P E+ M +
Sbjct: 202 MDEADKLL-SMDFKKMLEQIIKHLPENRQILLFSATFPISVRDFKEKHLRKPYEINLMDE 260
Query: 877 XT 882
T
Sbjct: 261 LT 262
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 98.3 bits (234), Expect = 7e-21
Identities = 52/137 (37%), Positives = 82/137 (59%), Gaps = 6/137 (4%)
Frame = +3
Query: 252 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 431
F D+ LK E+L I + GF+ PS +Q E IP A+ G DIL +AK+G GKTA +++ L++
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 432 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD------EEV 593
+ +++ + LV+ TRELA Q S+ K+M G +V V GG ++ D +++
Sbjct: 109 TDTTKNCIQALVLVPTRELALQTSQICIELGKHM-GAQVMVTTGGTSLKDDILRLYNKDI 167
Query: 594 LKTACPHIVVGTPGRIL 644
H++V TPGR+L
Sbjct: 168 FVHVVVHVIVATPGRVL 184
Score = 46.0 bits (104), Expect = 4e-05
Identities = 20/62 (32%), Positives = 40/62 (64%)
Frame = +1
Query: 697 LDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKFMQDPMEVM*MMK 876
+DE DK+L S+D ++ +++I ++ P +Q+++FSAT +R +K ++ P E+ M +
Sbjct: 202 MDEADKLL-SMDFKKMLEQIIKHLPENRQILLFSATFPISVRDFKEKHLRKPYEINLMDE 260
Query: 877 XT 882
T
Sbjct: 261 LT 262
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 84.2 bits (199), Expect = 1e-16
Identities = 43/116 (37%), Positives = 69/116 (59%)
Frame = +3
Query: 294 VDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMC 473
V G + P+E+Q C+P + G D + AK+G GKTA F L LQ+L ++ +V+
Sbjct: 23 VAMGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPILQKLCDDPYGIFAVVLT 82
Query: 474 HTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRI 641
TRELAFQI+ +++ + + G++ +V GG+ + K L PH+V+ TPGR+
Sbjct: 83 PTRELAFQIADQFKVLGRPI-GLKEAVIVGGLDMMKQALSLANK-PHVVIATPGRL 136
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +1
Query: 697 LDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLS 810
LDE D++L+ D++ IF P +Q ++FSATL+
Sbjct: 156 LDEADRLLDP-SFGDDLKVIFDAVPEKRQTLLFSATLT 192
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 81.4 bits (192), Expect = 9e-16
Identities = 69/209 (33%), Positives = 97/209 (46%), Gaps = 20/209 (9%)
Frame = +3
Query: 75 SEYDTVNKLIKLKKIMXXXXXXXXXXXXXXXXXXXXXGSTEVAPKKEVKGSYVSIHSSGF 254
S+ + VNK K KK G E ++VKGS + + +
Sbjct: 75 SKVEPVNKKKKKKKKKVAKKKDNDTVTQQETQEKEKGGDAEGLSNQKVKGSLIDMPE--W 132
Query: 255 RDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVL-GMDILCQAKSGMGKTAVFVLATLQQ 431
+ P+ILRA+ D GF P+ +Q IP A+L DI+ A++G GKT F + +Q
Sbjct: 133 EGLGVAPDILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQH 192
Query: 432 LE----------PS------ESHVY---VLVMCHTRELAFQISKEYERFSKYMSGVRVSV 554
+E PS ES Y L+M TRELA Q+ + +KY S V+V+
Sbjct: 193 IEAYKKRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQVKDHLVKAAKYTS-VKVAA 251
Query: 555 FFGGMPIQKDEEVLKTACPHIVVGTPGRI 641
GGM K + +LK P IVV TPGR+
Sbjct: 252 IVGGMAAPKQQRLLKQR-PEIVVATPGRL 279
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 79.4 bits (187), Expect = 4e-15
Identities = 47/113 (41%), Positives = 60/113 (53%)
Frame = +3
Query: 303 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTR 482
GFE PS +Q I + G D++ QA+SG GKTA F ++ LQ ++ LV+ TR
Sbjct: 16 GFEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQAIDTQLREPQALVLSPTR 75
Query: 483 ELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRI 641
ELA QI K YMS V+ GG I +D L HIV GTPGR+
Sbjct: 76 ELANQIQKVVLALGDYMS-VQCHACIGGTNIGEDIRKLDYG-QHIVSGTPGRV 126
Score = 46.0 bits (104), Expect = 4e-05
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +1
Query: 697 LDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKFMQDPMEVM 864
LDE D+ML + + +++R P QV++ SATL EI + KFM DP+ ++
Sbjct: 145 LDEADEMLNK-GFKEQIYDVYRYLPPATQVVLLSATLPHEILEMTSKFMTDPIRIL 199
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 73.3 bits (172), Expect = 2e-13
Identities = 38/136 (27%), Positives = 71/136 (52%), Gaps = 2/136 (1%)
Frame = +3
Query: 243 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLG--MDILCQAKSGMGKTAVFVL 416
+ F + L + R + D GF PS++Q +P + ++++ Q++SG GKTA FVL
Sbjct: 102 AKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLADPPVNMIAQSQSGTGKTAAFVL 161
Query: 417 ATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVL 596
L +++ ++ + V+ + T ELA Q K E K+ ++++ G + ++
Sbjct: 162 TMLSRVDATKPYPQVICLSPTYELARQTGKVAEAMGKHCPHIKINYAVRGNQFPRGQK-- 219
Query: 597 KTACPHIVVGTPGRIL 644
HI++GTPG +L
Sbjct: 220 --CTDHIIIGTPGTLL 233
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 71.7 bits (168), Expect = 7e-13
Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 5/154 (3%)
Frame = +3
Query: 195 EVAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILC 374
E P K V G + F + +++ I G+ P+ VQ +P + G D++
Sbjct: 463 ENIPSK-VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMA 521
Query: 375 QAKSGMGKTAVFVLATL-----QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSG 539
A++G GKTA ++L L Q L L + TRELA QI E +FS + +
Sbjct: 522 CAQTGSGKTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDH-TP 580
Query: 540 VRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRI 641
++V V +GG+ + L+ C H +VGTPGR+
Sbjct: 581 IKVCVCYGGVSVPYQASQLERGC-HFLVGTPGRL 613
Score = 32.7 bits (71), Expect = 0.42
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 697 LDECDKMLE---SLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKFMQ 846
LDE D+ML+ D+ + ++E +Q +MFSAT EI+ + F++
Sbjct: 632 LDEADRMLDLGFGPDIHKLIEESNMTAKESRQTLMFSATFPDEIQHLAGSFLK 684
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 68.5 bits (160), Expect = 7e-12
Identities = 34/94 (36%), Positives = 57/94 (60%)
Frame = +3
Query: 363 DILCQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGV 542
D++ A++G GKT F L LQ L + ++ L++ TRELAFQIS++ E + GV
Sbjct: 3 DVIGLAETGSGKTGAFALPILQALLDNPQRLFALILTPTRELAFQISEQCEALGSGI-GV 61
Query: 543 RVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRIL 644
+ +V GG+ + + ++ PHI++ TPGR++
Sbjct: 62 KCAVIVGGIDMM-SQALMLAKKPHIIIATPGRLI 94
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 66.9 bits (156), Expect = 2e-11
Identities = 48/149 (32%), Positives = 78/149 (52%), Gaps = 5/149 (3%)
Frame = +3
Query: 213 EVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGM 392
+V G+ + F F +++ +I + P+++Q + +P A+ G DI+ AK+G
Sbjct: 506 KVSGAMPARPCISFAHFGFDEQMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGS 565
Query: 393 GKTAVFVL-ATLQQLEPSESHV----YVLVMCHTRELAFQISKEYERFSKYMSGVRVSVF 557
GKTA F+ A + ++ E V VL+ TREL QI E RF K + V+VF
Sbjct: 566 GKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHVVAVF 625
Query: 558 FGGMPIQKDEEVLKTACPHIVVGTPGRIL 644
GG ++ + + + A IVV TPGR++
Sbjct: 626 GGGNKYEQSKALQEGA--EIVVATPGRLI 652
Score = 28.3 bits (60), Expect = 9.0
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +1
Query: 787 MMFSATLSKEIRPVCKKFMQDPMEVM 864
++FSAT K++ +C+ + DP+ V+
Sbjct: 683 LLFSATFKKKVEHLCRDILVDPVRVV 708
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 66.1 bits (154), Expect = 4e-11
Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 6/144 (4%)
Frame = +3
Query: 231 VSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVF 410
V+ F F + + + + D G + +Q G D++ QA++G GKT F
Sbjct: 68 VAQREGDFSKFRISQKTIDNLEDRGITYLFPIQASTFNYIYDGEDVIGQARTGTGKTLSF 127
Query: 411 VLATLQQLEPSESHVY------VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMP 572
L +++L+ + VLVM TRELA Q+ E+E S + V +GGMP
Sbjct: 128 ALPLVEKLQDGKLSQKRGRAPKVLVMAPTRELAKQVGNEFENLK---SNLEVYCIYGGMP 184
Query: 573 IQKDEEVLKTACPHIVVGTPGRIL 644
+ E + + ++VGTPGRIL
Sbjct: 185 YEPQENAINSGL-DVLVGTPGRIL 207
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 66.1 bits (154), Expect = 4e-11
Identities = 54/158 (34%), Positives = 73/158 (46%), Gaps = 28/158 (17%)
Frame = +3
Query: 252 FRDFLLKPEILRAIVDCGFEHPSEVQ--------------HECIPQAVL--------GMD 365
F D LK +LR I GFE PS +Q H C Q L D
Sbjct: 65 FDDMNLKEALLRGIYAYGFEKPSAIQQRAIRPCCQEFSPSHVCYNQLNLTKNHYVLSARD 124
Query: 366 ILCQAKSGMGKTAVFVLATLQQLEPSESH------VYVLVMCHTRELAFQISKEYERFSK 527
++ QA+SG GKTA F ++ LQ+++ + LV+ TRELA QI K
Sbjct: 125 VIAQAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKVVLALGD 184
Query: 528 YMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRI 641
YM V+ GG +++D L+ H+VVGTPGR+
Sbjct: 185 YMH-VKCHACIGGTNVREDRMKLEEGV-HVVVGTPGRV 220
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/56 (33%), Positives = 33/56 (58%)
Frame = +1
Query: 697 LDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKFMQDPMEVM 864
LDE D+ML S + + ++F P QV++ SAT+ ++ V KFM+D + ++
Sbjct: 239 LDEADEML-SRGFKDQIYDVFTRLPTSVQVVLLSATMPTDVLEVTNKFMRDVVRIL 293
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 66.1 bits (154), Expect = 4e-11
Identities = 45/136 (33%), Positives = 74/136 (54%), Gaps = 5/136 (3%)
Frame = +3
Query: 252 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVF---VLAT 422
F DF + L ++ GF P+++Q + IP A+ G D+L AK+G GKT F ++ T
Sbjct: 52 FSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPIIET 111
Query: 423 L-QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEE-VL 596
L +Q S + LV+ TRELA+Q + + + + GG ++ +++ ++
Sbjct: 112 LWRQKWTSMDGLGALVISPTRELAYQTFEVLVKIGN-KHDLSAGLIIGGKDLKNEQKRIM 170
Query: 597 KTACPHIVVGTPGRIL 644
KT +IVV TPGR+L
Sbjct: 171 KT---NIVVCTPGRLL 183
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/50 (26%), Positives = 29/50 (58%)
Frame = +1
Query: 697 LDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKFMQ 846
LDE D++L+ + + I N P +Q +++SAT ++ ++ + + +Q
Sbjct: 202 LDEADRILD-MGFAPTLNAIIENLPSERQTLLYSATQTRSVKDLARLSLQ 250
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 60.9 bits (141), Expect = 1e-09
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Frame = +3
Query: 285 RAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQL--EPSES-HV 455
RA+ + GF HP+ +Q IP A++G D+ A +G GKTA F+L L++L P++S +
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMGKDVCACAATGTGKTAAFMLPILERLLYRPTQSPAI 82
Query: 456 YVLVMCHTRELAFQ 497
VLV+ TRELA Q
Sbjct: 83 RVLVITPTRELAIQ 96
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 54.8 bits (126), Expect = 9e-08
Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Frame = +3
Query: 282 LRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLE----PSES 449
L+ I D GF +E+QH+ I + G D+L AK+G GKT F++ ++ L + +
Sbjct: 584 LQGIKDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVPVVELLYKLQFKTRN 643
Query: 450 HVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGT 629
V+++ TREL+ Q K+ + GG+ + + E L+ ++++ T
Sbjct: 644 GTGVIIISPTRELSLQTYGVARDLLKH-HNFTYGIIMGGVNRKAEAERLQKGV-NLLIAT 701
Query: 630 PGRIL 644
PGR+L
Sbjct: 702 PGRLL 706
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 54.0 bits (124), Expect = 2e-07
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Frame = +3
Query: 219 KGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGK 398
KG + +++ + IL + G++ P+ +Q + IP + DI+ A++G GK
Sbjct: 92 KGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDIIGVAETGSGK 151
Query: 399 TAVFV---------LATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVS 551
TA F L +++ ++ Y L++ TRELA QI +E +F + + G+R
Sbjct: 152 TAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFGRPL-GIRTV 210
Query: 552 VFFGG 566
GG
Sbjct: 211 SVIGG 215
>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
Length = 127
Score = 44.0 bits (99), Expect = 2e-04
Identities = 18/55 (32%), Positives = 35/55 (63%)
Frame = +1
Query: 697 LDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKFMQDPMEV 861
LDE D+ML+ + D++ + P +Q ++FSAT S +I+ + +K + +P+E+
Sbjct: 9 LDEADRMLD-MGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEI 62
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 39.9 bits (89), Expect = 0.003
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 9/135 (6%)
Frame = +3
Query: 267 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 446
L+ ++L+A+ P+ +Q IP+ + ++C A++G GKT ++ + +L E
Sbjct: 385 LRDDVLKALDALNIHQPTVIQMVTIPKIIHRHHVICAAQTGSGKTLAYLAPLVHRLREDE 444
Query: 447 SHVYVL---------VMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 599
+L ++ RELA QI K + + + R GG + + L+
Sbjct: 445 ERHGILARLKRPRACIVVPARELATQILKTAKSLCHH-ARFRSVGLIGGRKQKWMRDDLE 503
Query: 600 TACPHIVVGTPGRIL 644
+ ++V TPG +L
Sbjct: 504 SPV-DLLVATPGTLL 517
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 39.5 bits (88), Expect = 0.004
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Frame = +3
Query: 252 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVF------V 413
F D L PE+ + F+ P+ +Q + + + G DI+ A++G GKT + +
Sbjct: 74 FHDLNLPPELSTYLAKKNFQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSLPLCML 133
Query: 414 LATLQQLEPSESHVYVLVMCHTRELAFQI 500
L T P ++ V L++ TREL Q+
Sbjct: 134 LRTKAPSNPGDTPV-ALILTPTRELMQQV 161
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 39.1 bits (87), Expect = 0.005
Identities = 27/60 (45%), Positives = 31/60 (51%)
Frame = +3
Query: 462 LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRI 641
LV+ TRELA QI K YMS V+ GG I +D L HIV GTPGR+
Sbjct: 7 LVLSPTRELANQIQKVVLALGDYMS-VQCHACIGGTNIGEDIRKLDYG-QHIVSGTPGRV 64
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 36.7 bits (81), Expect = 0.026
Identities = 23/71 (32%), Positives = 37/71 (52%)
Frame = +3
Query: 432 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 611
L+P + + VLV+C TRELA Q+ + K+ +R + +GG P L+
Sbjct: 127 LQPGDGPI-VLVLCPTRELAQQVQEVAYSVGKHCK-LRSTCIYGGAPKGPQIRELERGV- 183
Query: 612 HIVVGTPGRIL 644
I + TPGR++
Sbjct: 184 EICIATPGRLI 194
Score = 33.1 bits (72), Expect = 0.32
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +1
Query: 697 LDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKFMQDPMEV 861
LDE D+ML+ + ++ I +Q +M+SAT KE++ + F+ D + +
Sbjct: 212 LDEADRMLD-MGFEPQIRTIIDQIRPDRQTLMWSATWPKEVQGLAHDFLSDYVHI 265
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 35.9 bits (79), Expect = 0.045
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +1
Query: 697 LDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKFMQDPM 855
+DE D ML+ L + VQ+I + +Q M+FSAT+ I + + + P+
Sbjct: 285 VDEVDTMLQ-LGFEQQVQQILERLSNRRQTMLFSATIPPSIEAMASRLLNAPV 336
>SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 34.7 bits (76), Expect = 0.10
Identities = 26/94 (27%), Positives = 40/94 (42%)
Frame = +3
Query: 75 SEYDTVNKLIKLKKIMXXXXXXXXXXXXXXXXXXXXXGSTEVAPKKEVKGSYVSIHSSGF 254
S+ + VNK K KK E ++V+GS + + S +
Sbjct: 17 SKVEPVNKKKKKKKKKVAKKKDNDNVTQQESQEKEKGSDAEGLSNQKVQGSLIDM--SEW 74
Query: 255 RDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVL 356
+ P+ILRA+ D GF P+ +Q IP A+L
Sbjct: 75 EGLGVAPDILRALGDQGFSKPTPIQSLSIPPALL 108
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 33.1 bits (72), Expect = 0.32
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +1
Query: 697 LDECDKMLE---SLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKFMQD 849
LDE D+ML+ +RR V + +Q +MFSAT KEI+ + + F+++
Sbjct: 1005 LDEADRMLDMGFEPQIRRIVDQDSMPKTGIRQTLMFSATFPKEIQMLARDFLEN 1058
>SB_27891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 32.7 bits (71), Expect = 0.42
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = +3
Query: 189 STEVAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHEC--IPQAVLGM 362
ST+ A S S+ + F L E+L + G H S VQ + A+L +
Sbjct: 376 STQPARLASTPASIASLFNGYFSSLCLGSELLELV---GIPHLSSVQLRTQEVQNALLAL 432
Query: 363 DILCQAKSGMGKTAVFVLATLQQLEPSESHVYVL 464
D+ +A G + T QQ+ PS +H+Y L
Sbjct: 433 DVN-EASGSDGIPCRLLKETAQQIAPSLTHLYNL 465
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 32.7 bits (71), Expect = 0.42
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +1
Query: 697 LDECDKMLE---SLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKFMQD 849
LDE D+ML+ +RR V+ + +Q +MFSAT +EI+ + F+ D
Sbjct: 868 LDEADRMLDMGFEPAIRRIVESMGMPDKSERQTLMFSATFPEEIQRLAGDFLND 921
>SB_48450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 457
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = -2
Query: 571 GIPP-KNTDTLTPDIYFEKRS--YSLLIWKANSLVWH-ITST*TWLSEGSSCC 425
GIP N TP I+ + +S Y +LIW A L+W I + L G CC
Sbjct: 109 GIPSLSNPKCYTPQIFEDVKSVWYWILIWIAGPLIWFTIIAVFALLVFGMYCC 161
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 29.9 bits (64), Expect = 3.0
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -2
Query: 412 TNTAVLPIPDLA*QSMSIPRTACGMHSC*TSEGCSKPQSTIARSISGLSKKSLKPELWM 236
T T + P LA ++ + P T + SE P+ST+A + + +L+PE M
Sbjct: 2435 TGTTIAPETTLALETTTAPETTLPPETTMASESTLAPESTLAPETTMVPGTTLEPETTM 2493
>SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 532 CQESECQYSLVVCQFRKTRKSLRQHVLTL*WELPVEF 642
C+ S C + CQF + +R H+ T +E EF
Sbjct: 320 CEHSRCPHQAYGCQFEGNNEQVRSHLETCKFEAVKEF 356
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 540 VRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRI 641
V+ GG +++D L+ H+VVGTPGR+
Sbjct: 3 VKCHACIGGTNVREDRMKLEEGV-HVVVGTPGRV 35
>SB_39745| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 996
Score = 28.3 bits (60), Expect = 9.0
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 115 KSWLTTTIFSTTKMKNKQINRLLTGLPKWRQRRRLKDPTYPST 243
KS T S TK +++ + P W++R R K T P+T
Sbjct: 662 KSARTYLALSRTKRQSRSASTSRIRYPTWKRRNRAKRKTLPAT 704
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 28.3 bits (60), Expect = 9.0
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = +1
Query: 778 KQVMMFSATLSKEIRPVCKKFMQDPMEV 861
+Q +MFSAT +++ + +K + P+E+
Sbjct: 261 RQTVMFSATFPRQMEALARKILDKPIEI 288
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,468,162
Number of Sequences: 59808
Number of extensions: 587937
Number of successful extensions: 1522
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1505
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2609867019
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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