Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_I06
         (905 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    79   2e-16
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           23   9.6  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 78.6 bits (185), Expect = 2e-16
 Identities = 45/150 (30%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
 Frame = +3

Query: 216 VKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 395
           V G     H   F    L+ E++  +    +  P+ +Q   IP  + G D++  A++G G
Sbjct: 164 VSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQTGSG 223

Query: 396 KTAVFVLATLQQLEPSESHV-------YVLVMCHTRELAFQISKEYERFSKYMSGVRVSV 554
           KTA F+L  +  L   E  +       Y++++  TRELA QI  E  +F+ + + ++V V
Sbjct: 224 KTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFA-HGTKLKVCV 282

Query: 555 FFGGMPIQKDEEVLKTACPHIVVGTPGRIL 644
            +GG  +Q   ++++  C H++V TPGR+L
Sbjct: 283 SYGGTAVQHQLQLMRGGC-HVLVATPGRLL 311



 Score = 28.7 bits (61), Expect = 0.26
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
 Frame = +1

Query: 697 LDECDKMLESLDMRRDVQEIFRNTP----HGKQVMMFSATLSKEIRPVCKKFMQD 849
           LDE D+ML+ +     ++++  +        +Q +MFSAT   EI+ +  KF+ +
Sbjct: 329 LDEADRMLD-MGFLPSIEKVMGHATMPEKQQRQTLMFSATFPAEIQELAGKFLHN 382


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 531 YISRNARTPYLFGKPTLWCGT 469
           + + +A   YLFG   +WC T
Sbjct: 53  FYTHSALLNYLFGMEGVWCST 73


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 915,772
Number of Sequences: 2352
Number of extensions: 18929
Number of successful extensions: 29
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97987887
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)