Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_I05
(903 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1709.11c |png2||ING family homolog Png2|Schizosaccharomyces ... 87 2e-18
SPAC3G9.08 |png1||ING family homolog Png1|Schizosaccharomyces po... 82 9e-17
SPCC594.05c |||COMPASS complex subunit |Schizosaccharomyces pomb... 39 8e-04
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 38 0.001
SPBC17D11.04c |||histone acetyltransferase complex subunit Nto1 ... 35 0.018
SPCC126.07c |||human CTD-binding SR-like protein rA9 homolog|Sch... 31 0.30
SPAC2F7.07c |||histone deacetylase complex subunit Rco1 |Schizos... 28 2.1
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 27 4.8
SPAC1486.01 |||manganese superoxide dismutase |Schizosaccharomyc... 27 4.8
SPAC22E12.18 |||conserved fungal protein|Schizosaccharomyces pom... 26 6.4
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 26 8.4
SPCC1393.07c |mug4||sequence orphan|Schizosaccharomyces pombe|ch... 26 8.4
SPBC1652.02 |aap1|SPBC16A3.20c|APC amino acid transporter|Schizo... 26 8.4
>SPBC1709.11c |png2||ING family homolog Png2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 305
Score = 87.4 bits (207), Expect = 2e-18
Identities = 30/49 (61%), Positives = 36/49 (73%)
Frame = +2
Query: 251 EPRYCICNQVSYGDMVACDNQDCPYEWFHYPCVGITAPPKGKWYCPQCQ 397
E YC C QVSYG M+ CDN++C EWFH PCVG+ PPKG WYC +C+
Sbjct: 247 EQLYCYCQQVSYGQMIGCDNENCKREWFHLPCVGLVEPPKGIWYCKECE 295
>SPAC3G9.08 |png1||ING family homolog Png1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 82.2 bits (194), Expect = 9e-17
Identities = 31/52 (59%), Positives = 37/52 (71%)
Frame = +2
Query: 242 DPNEPRYCICNQVSYGDMVACDNQDCPYEWFHYPCVGITAPPKGKWYCPQCQ 397
+ NE +YC C Q SYG MVACDN +C EWFH CVG+ APP+G WYC C+
Sbjct: 225 EDNE-KYCFCQQGSYGQMVACDNANCEREWFHMECVGLKAPPEGTWYCEACR 275
>SPCC594.05c |||COMPASS complex subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 424
Score = 39.1 bits (87), Expect = 8e-04
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +2
Query: 236 TYDPNEPRYCICNQVSYGD-MVACDNQDCPYEWFHYPCVGITAPPKG---KWYCPQC 394
T D P YCIC + G M+ CD + +WFH CV I +++CP+C
Sbjct: 112 TADHQRPLYCICQKPDDGSWMLGCDGCE---DWFHGTCVNIPESYNDLTVQYFCPKC 165
>SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1588
Score = 38.3 bits (85), Expect = 0.001
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +2
Query: 242 DPNEPRYCICNQVSYGDMVACDNQDCPYEWFHYPCVGITAP---PKGKWYCPQCQTNMRR 412
DP++ YC C Q G M+ C+ C +EW+H C+ ++ K+ CP C +
Sbjct: 1167 DPSDFHYCFCRQPEAGMMIECEL--C-HEWYHAKCMKMSKKKLRADEKFICPICDYRVEV 1223
Query: 413 NR-AHR 427
R +HR
Sbjct: 1224 PRHSHR 1229
Score = 35.9 bits (79), Expect = 0.008
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Frame = +2
Query: 242 DPNEPRYCICNQ---VSYGDMVACDNQDCPYEWFHYPCVGITA---PPKGKWYCPQC 394
D N C+C Q +S G V C N C EWFHY CVG+++ + CP C
Sbjct: 1450 DQNASVICLCRQPFAISDGT-VQCHN--C-LEWFHYECVGLSSDIVSTLSNYACPDC 1502
>SPBC17D11.04c |||histone acetyltransferase complex subunit Nto1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 34.7 bits (76), Expect = 0.018
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +2
Query: 242 DPNEPRYCICNQVSYGD---MVACDNQDCPYEWFHYPCVGITAPPKGKWYCPQC 394
D + R ICN+ + +V CDN + H C GI P+G+W+C +C
Sbjct: 191 DELDGRCVICNEAECENSNAIVFCDNCNTSV---HQNCYGIPFVPEGQWFCKKC 241
>SPCC126.07c |||human CTD-binding SR-like protein rA9
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 571
Score = 30.7 bits (66), Expect = 0.30
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 257 RYCICNQVSYGD-MVACDNQDCPYEWFHYPCVGITAPPKGKWYCPQC 394
R IC + + + ++ CD D Y H C+ + A P ++YCP C
Sbjct: 124 RCVICGRSDHAEVLLLCDGCDDAY---HTYCLNMDAVPIEEFYCPNC 167
>SPAC2F7.07c |||histone deacetylase complex subunit Rco1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = +2
Query: 287 GDMVACDNQDCPYEWFHYPCVGITAP----PKGKWYCPQCQTNMRRNRAHRKN*LKSH 448
G+ + C+ CP FH+ C+ P WYC +C+ + N + L+S+
Sbjct: 273 GNFLCCET--CPNS-FHFTCIDPPIEEKNLPDDAWYCNECKHHSLYNELDEQEELESN 327
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 26.6 bits (56), Expect = 4.8
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Frame = +2
Query: 293 MVACDNQDCPYEWF-HYPCVG--ITAPPKGKWYCPQC 394
+V CD + P+ H P + + P G+W+C C
Sbjct: 249 IVFCDGCNTPFHQLCHEPYISDELLDSPNGEWFCDDC 285
>SPAC1486.01 |||manganese superoxide dismutase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 218
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 36 RFYHMDTAVPLPLPSATNKRKPAIVRQLCHLTHNKSQQ 149
R H +P PLP A N +PA+ + L H+K Q
Sbjct: 20 RGVHTKATLP-PLPYAYNALEPALSETIMKLHHDKHHQ 56
>SPAC22E12.18 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 336
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +3
Query: 48 MDTAVPLPLPSATNKRKPAIVRQLCHLTHNKSQQLPVARPPP 173
+D P+ LPS + ++++ + L H + +L VA PP
Sbjct: 33 LDDMKPIELPSELVESPLSMLKDVATLIHQYTTKLSVAAKPP 74
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 25.8 bits (54), Expect = 8.4
Identities = 12/40 (30%), Positives = 15/40 (37%), Gaps = 6/40 (15%)
Frame = +2
Query: 323 YEWFHYPCV------GITAPPKGKWYCPQCQTNMRRNRAH 424
Y FH C+ I + W CP CQ+N H
Sbjct: 217 YHVFHLSCIRKWCKNSIEQRNEDAWRCPYCQSNQTETSLH 256
>SPCC1393.07c |mug4||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 845
Score = 25.8 bits (54), Expect = 8.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 688 NKAFFFTALHSSCGLSKLINVSYHVWIQL 602
N +F T L SC + K +NV H +QL
Sbjct: 753 NSSFIDTPLPHSCEMEKSLNVLQHKVLQL 781
>SPBC1652.02 |aap1|SPBC16A3.20c|APC amino acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 594
Score = 25.8 bits (54), Expect = 8.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 446 VILINSFGGHGYGAC 402
V+L+N+FG YG C
Sbjct: 194 VVLVNAFGARSYGEC 208
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,262,666
Number of Sequences: 5004
Number of extensions: 62018
Number of successful extensions: 154
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 154
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 456499320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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