Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_I05
(903 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032644-4|CAA21665.1| 490|Caenorhabditis elegans Hypothetical ... 93 2e-19
CU457744-3|CAM36369.1| 247|Caenorhabditis elegans Hypothetical ... 56 3e-08
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 45 6e-05
U20555-1|AAC46918.1| 839|Caenorhabditis elegans zinc finger pro... 38 0.007
L23645-4|AAK26137.1| 867|Caenorhabditis elegans Zinc finger pro... 38 0.007
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 36 0.052
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 36 0.052
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 36 0.052
AF067622-3|ABD63225.1| 447|Caenorhabditis elegans Hypothetical ... 35 0.092
Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z81515-10|CAH60782.1| 413|Caenorhabditis elegans Hypothetical p... 32 0.49
Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical pr... 32 0.49
Z81515-8|CAB54234.3| 692|Caenorhabditis elegans Hypothetical pr... 32 0.49
Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical pr... 32 0.49
Z81515-6|CAB04198.1| 405|Caenorhabditis elegans Hypothetical pr... 32 0.49
U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein... 31 0.85
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 30 2.0
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 30 2.0
>AL032644-4|CAA21665.1| 490|Caenorhabditis elegans Hypothetical
protein Y51H1A.4 protein.
Length = 490
Score = 93.5 bits (222), Expect = 2e-19
Identities = 31/55 (56%), Positives = 40/55 (72%)
Frame = +2
Query: 242 DPNEPRYCICNQVSYGDMVACDNQDCPYEWFHYPCVGITAPPKGKWYCPQCQTNM 406
+ +E +C CN+ SYGDMV CDN+ C WFHYPC+G+ PP GKWYCP+C+ M
Sbjct: 424 EEDEMHWCFCNEKSYGDMVQCDNRHCTLRWFHYPCIGMVEPPTGKWYCPRCEVTM 478
>CU457744-3|CAM36369.1| 247|Caenorhabditis elegans Hypothetical
protein T06A10.4 protein.
Length = 247
Score = 56.4 bits (130), Expect = 3e-08
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +2
Query: 260 YCICNQVSYGDMVACDNQDCPYEWFHYPCVGITAPPKGKWYC 385
YC C M+ C+N C Y WFH+ C+G+ P G WYC
Sbjct: 177 YCWCQLDKNDTMIECENPGCKYGWFHFTCIGMITAPAGDWYC 218
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 45.2 bits (102), Expect = 6e-05
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +2
Query: 290 DMVACDNQDCPYEWFHYPCVGITA-PPKGKWYCPQCQTNMRRNRAHRK 430
+M+ CD C +WFH+ CVG+TA P KW+C +C T +++ H K
Sbjct: 322 NMIGCDQ--CQ-DWFHWHCVGLTAEPTDSKWFCTRC-TKGNKSKKHGK 365
>U20555-1|AAC46918.1| 839|Caenorhabditis elegans zinc finger
protein protein.
Length = 839
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +2
Query: 263 CIC---NQVSYGDMVACDNQDCPYEWFHYPCVGITAPPKGKWYCPQC 394
C+C N + ++ CD ++C H C GI P+G+W+C +C
Sbjct: 9 CVCADENGWTDNPLIYCDGENCEVA-VHQGCYGIQEVPEGEWFCAKC 54
>L23645-4|AAK26137.1| 867|Caenorhabditis elegans Zinc finger
protein protein 1,isoform a protein.
Length = 867
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +2
Query: 263 CIC---NQVSYGDMVACDNQDCPYEWFHYPCVGITAPPKGKWYCPQC 394
C+C N + ++ CD ++C H C GI P+G+W+C +C
Sbjct: 9 CVCADENGWTDNPLIYCDGENCEVA-VHQGCYGIQEVPEGEWFCAKC 54
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 35.5 bits (78), Expect = 0.052
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +2
Query: 242 DPNEPRYC-ICNQVSYGDMVACDNQDCPYEWFHYPCV--GITAPPKGKWYCPQCQ 397
+ N C +CNQ G+++ CD Y H C+ + PP+G W CP C+
Sbjct: 261 EENHQENCEVCNQD--GELMLCDTCTRAY---HVACIDENMEQPPEGDWSCPHCE 310
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +2
Query: 260 YC-ICNQVSYGDMVACDNQDCPYEWFHYPCVG--ITAPPKGKWYCPQC 394
YC IC + S +++ CD CP + Y C+ +T P+G+W CP+C
Sbjct: 330 YCRICKETS--NILLCDT--CPSSYHAY-CIDPPLTEIPEGEWSCPRC 372
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 35.5 bits (78), Expect = 0.052
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +2
Query: 242 DPNEPRYC-ICNQVSYGDMVACDNQDCPYEWFHYPCV--GITAPPKGKWYCPQCQ 397
+ N C +CNQ G+++ CD Y H C+ + PP+G W CP C+
Sbjct: 261 EENHQENCEVCNQD--GELMLCDTCTRAY---HVACIDENMEQPPEGDWSCPHCE 310
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +2
Query: 260 YC-ICNQVSYGDMVACDNQDCPYEWFHYPCVG--ITAPPKGKWYCPQC 394
YC IC + S +++ CD CP + Y C+ +T P+G+W CP+C
Sbjct: 330 YCRICKETS--NILLCDT--CPSSYHAY-CIDPPLTEIPEGEWSCPRC 372
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 35.5 bits (78), Expect = 0.052
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +2
Query: 242 DPNEPRYC-ICNQVSYGDMVACDNQDCPYEWFHYPCV--GITAPPKGKWYCPQCQ 397
+ N C +CNQ G+++ CD Y H C+ + PP+G W CP C+
Sbjct: 261 EENHQENCEVCNQD--GELMLCDTCTRAY---HVACIDENMEQPPEGDWSCPHCE 310
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +2
Query: 260 YC-ICNQVSYGDMVACDNQDCPYEWFHYPCVG--ITAPPKGKWYCPQC 394
YC IC + S +++ CD CP + Y C+ +T P+G+W CP+C
Sbjct: 330 YCRICKETS--NILLCDT--CPSSYHAY-CIDPPLTEIPEGEWSCPRC 372
>AF067622-3|ABD63225.1| 447|Caenorhabditis elegans Hypothetical
protein F33E11.6b protein.
Length = 447
Score = 34.7 bits (76), Expect = 0.092
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = +2
Query: 257 RYC-ICNQVSYGD-MVACDNQDCPYEWFHYPCVGITAPPKGKWYC-PQCQ-TNMRRNR 418
R C ICN+ D +V CD D FH CVG+ P+G W C C NM+ NR
Sbjct: 381 RLCSICNKPEKEDEIVFCDRCD---RGFHTYCVGLKKLPQGTWICDTYCAIENMKFNR 435
>Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical
protein ZK593.4 protein.
Length = 1477
Score = 33.5 bits (73), Expect = 0.21
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +2
Query: 242 DPNEPRYCI-CNQVSYGDMVA-CDNQDCPYEWFHYPCVGITAP-PKGKWYCPQC 394
DP + +C+ CN+ D++ CD C Y C + P+G+W CP+C
Sbjct: 315 DPMDQVFCVACNEGKDEDLLLLCDIDGCNNGRHTYCCDPVLDEVPEGEWRCPKC 368
>Z81515-10|CAH60782.1| 413|Caenorhabditis elegans Hypothetical
protein F26H11.2g protein.
Length = 413
Score = 32.3 bits (70), Expect = 0.49
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Frame = +2
Query: 260 YCICNQVSYGDMVACDNQDCPYEWFHYPCVGIT---APPKGKWYCPQC 394
YC+C Q Y D D WFH CVG T A + CP C
Sbjct: 180 YCVC-QKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPAC 226
>Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical protein
F26H11.2c protein.
Length = 2266
Score = 32.3 bits (70), Expect = 0.49
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Frame = +2
Query: 260 YCICNQVSYGDMVACDNQDCPYEWFHYPCVGIT---APPKGKWYCPQC 394
YC+C Q Y D D WFH CVG T A + CP C
Sbjct: 2033 YCVC-QKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPAC 2079
>Z81515-8|CAB54234.3| 692|Caenorhabditis elegans Hypothetical
protein F26H11.2d protein.
Length = 692
Score = 32.3 bits (70), Expect = 0.49
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Frame = +2
Query: 260 YCICNQVSYGDMVACDNQDCPYEWFHYPCVGIT---APPKGKWYCPQC 394
YC+C Q Y D D WFH CVG T A + CP C
Sbjct: 459 YCVC-QKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPAC 505
>Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical
protein F26H11.2f protein.
Length = 510
Score = 32.3 bits (70), Expect = 0.49
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Frame = +2
Query: 260 YCICNQVSYGDMVACDNQDCPYEWFHYPCVGIT---APPKGKWYCPQC 394
YC+C Q Y D D WFH CVG T A + CP C
Sbjct: 277 YCVC-QKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPAC 323
>Z81515-6|CAB04198.1| 405|Caenorhabditis elegans Hypothetical
protein F26H11.2e protein.
Length = 405
Score = 32.3 bits (70), Expect = 0.49
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Frame = +2
Query: 260 YCICNQVSYGDMVACDNQDCPYEWFHYPCVGIT---APPKGKWYCPQC 394
YC+C Q Y D D WFH CVG T A + CP C
Sbjct: 172 YCVC-QKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPAC 218
>U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein 1
protein.
Length = 1376
Score = 31.5 bits (68), Expect = 0.85
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +2
Query: 233 WTYDPNEPRYCICNQVSYGDMVACDNQD--CPYEWFHYPCVGITAPPKGKWYCPQCQ 397
W E IC + +M+ CD + C E F +T P+G W+C +C+
Sbjct: 1080 WERSSREALCQICKSMDGDEMLVCDGCESGCHMECFR---PRMTKVPEGDWFCQRCR 1133
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 287 GDMVACDNQDCPYEWFHYPCV--GITAPPKGKWYCPQC 394
G+++ CD CP +H C+ + PP+G W C C
Sbjct: 266 GELLLCDT--CPRA-YHTVCIDENMEEPPEGDWSCAHC 300
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Frame = +2
Query: 260 YC-ICNQVSYGDMVACDNQDCPYEWFHYPCVG--ITAPPKGK-WYCPQCQT 400
+C IC + +++ CD+ C FH C+ +T PK + W CP+C+T
Sbjct: 319 FCKICKETE--NLLLCDSCVCS---FHAYCIDPPLTEVPKEETWSCPRCET 364
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 287 GDMVACDNQDCPYEWFHYPCV--GITAPPKGKWYCPQC 394
G+++ CD CP +H C+ + PP+G W C C
Sbjct: 266 GELLLCDT--CPRA-YHTVCIDENMEEPPEGDWSCAHC 300
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Frame = +2
Query: 260 YC-ICNQVSYGDMVACDNQDCPYEWFHYPCVG--ITAPPKGK-WYCPQCQT 400
+C IC + +++ CD+ C FH C+ +T PK + W CP+C+T
Sbjct: 319 FCKICKETE--NLLLCDSCVCS---FHAYCIDPPLTEVPKEETWSCPRCET 364
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,779,299
Number of Sequences: 27780
Number of extensions: 377040
Number of successful extensions: 840
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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