BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fdpeP01_F_I05 (903 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AL032644-4|CAA21665.1| 490|Caenorhabditis elegans Hypothetical ... 93 2e-19 CU457744-3|CAM36369.1| 247|Caenorhabditis elegans Hypothetical ... 56 3e-08 Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 45 6e-05 U20555-1|AAC46918.1| 839|Caenorhabditis elegans zinc finger pro... 38 0.007 L23645-4|AAK26137.1| 867|Caenorhabditis elegans Zinc finger pro... 38 0.007 Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 36 0.052 Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 36 0.052 AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 36 0.052 AF067622-3|ABD63225.1| 447|Caenorhabditis elegans Hypothetical ... 35 0.092 Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical pr... 33 0.21 Z81515-10|CAH60782.1| 413|Caenorhabditis elegans Hypothetical p... 32 0.49 Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical pr... 32 0.49 Z81515-8|CAB54234.3| 692|Caenorhabditis elegans Hypothetical pr... 32 0.49 Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical pr... 32 0.49 Z81515-6|CAB04198.1| 405|Caenorhabditis elegans Hypothetical pr... 32 0.49 U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein... 31 0.85 U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 30 2.0 AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 30 2.0 >AL032644-4|CAA21665.1| 490|Caenorhabditis elegans Hypothetical protein Y51H1A.4 protein. Length = 490 Score = 93.5 bits (222), Expect = 2e-19 Identities = 31/55 (56%), Positives = 40/55 (72%) Frame = +2 Query: 242 DPNEPRYCICNQVSYGDMVACDNQDCPYEWFHYPCVGITAPPKGKWYCPQCQTNM 406 + +E +C CN+ SYGDMV CDN+ C WFHYPC+G+ PP GKWYCP+C+ M Sbjct: 424 EEDEMHWCFCNEKSYGDMVQCDNRHCTLRWFHYPCIGMVEPPTGKWYCPRCEVTM 478 >CU457744-3|CAM36369.1| 247|Caenorhabditis elegans Hypothetical protein T06A10.4 protein. Length = 247 Score = 56.4 bits (130), Expect = 3e-08 Identities = 18/42 (42%), Positives = 23/42 (54%) Frame = +2 Query: 260 YCICNQVSYGDMVACDNQDCPYEWFHYPCVGITAPPKGKWYC 385 YC C M+ C+N C Y WFH+ C+G+ P G WYC Sbjct: 177 YCWCQLDKNDTMIECENPGCKYGWFHFTCIGMITAPAGDWYC 218 >Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical protein C11G6.3 protein. Length = 385 Score = 45.2 bits (102), Expect = 6e-05 Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 1/48 (2%) Frame = +2 Query: 290 DMVACDNQDCPYEWFHYPCVGITA-PPKGKWYCPQCQTNMRRNRAHRK 430 +M+ CD C +WFH+ CVG+TA P KW+C +C T +++ H K Sbjct: 322 NMIGCDQ--CQ-DWFHWHCVGLTAEPTDSKWFCTRC-TKGNKSKKHGK 365 >U20555-1|AAC46918.1| 839|Caenorhabditis elegans zinc finger protein protein. Length = 839 Score = 38.3 bits (85), Expect = 0.007 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%) Frame = +2 Query: 263 CIC---NQVSYGDMVACDNQDCPYEWFHYPCVGITAPPKGKWYCPQC 394 C+C N + ++ CD ++C H C GI P+G+W+C +C Sbjct: 9 CVCADENGWTDNPLIYCDGENCEVA-VHQGCYGIQEVPEGEWFCAKC 54 >L23645-4|AAK26137.1| 867|Caenorhabditis elegans Zinc finger protein protein 1,isoform a protein. Length = 867 Score = 38.3 bits (85), Expect = 0.007 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%) Frame = +2 Query: 263 CIC---NQVSYGDMVACDNQDCPYEWFHYPCVGITAPPKGKWYCPQC 394 C+C N + ++ CD ++C H C GI P+G+W+C +C Sbjct: 9 CVCADENGWTDNPLIYCDGENCEVA-VHQGCYGIQEVPEGEWFCAKC 54 >Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical protein T14G8.1 protein. Length = 1787 Score = 35.5 bits (78), Expect = 0.052 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Frame = +2 Query: 242 DPNEPRYC-ICNQVSYGDMVACDNQDCPYEWFHYPCV--GITAPPKGKWYCPQCQ 397 + N C +CNQ G+++ CD Y H C+ + PP+G W CP C+ Sbjct: 261 EENHQENCEVCNQD--GELMLCDTCTRAY---HVACIDENMEQPPEGDWSCPHCE 310 Score = 34.3 bits (75), Expect = 0.12 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 3/48 (6%) Frame = +2 Query: 260 YC-ICNQVSYGDMVACDNQDCPYEWFHYPCVG--ITAPPKGKWYCPQC 394 YC IC + S +++ CD CP + Y C+ +T P+G+W CP+C Sbjct: 330 YCRICKETS--NILLCDT--CPSSYHAY-CIDPPLTEIPEGEWSCPRC 372 >Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical protein T14G8.1 protein. Length = 1787 Score = 35.5 bits (78), Expect = 0.052 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Frame = +2 Query: 242 DPNEPRYC-ICNQVSYGDMVACDNQDCPYEWFHYPCV--GITAPPKGKWYCPQCQ 397 + N C +CNQ G+++ CD Y H C+ + PP+G W CP C+ Sbjct: 261 EENHQENCEVCNQD--GELMLCDTCTRAY---HVACIDENMEQPPEGDWSCPHCE 310 Score = 34.3 bits (75), Expect = 0.12 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 3/48 (6%) Frame = +2 Query: 260 YC-ICNQVSYGDMVACDNQDCPYEWFHYPCVG--ITAPPKGKWYCPQC 394 YC IC + S +++ CD CP + Y C+ +T P+G+W CP+C Sbjct: 330 YCRICKETS--NILLCDT--CPSSYHAY-CIDPPLTEIPEGEWSCPRC 372 >AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. Length = 1787 Score = 35.5 bits (78), Expect = 0.052 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Frame = +2 Query: 242 DPNEPRYC-ICNQVSYGDMVACDNQDCPYEWFHYPCV--GITAPPKGKWYCPQCQ 397 + N C +CNQ G+++ CD Y H C+ + PP+G W CP C+ Sbjct: 261 EENHQENCEVCNQD--GELMLCDTCTRAY---HVACIDENMEQPPEGDWSCPHCE 310 Score = 34.3 bits (75), Expect = 0.12 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 3/48 (6%) Frame = +2 Query: 260 YC-ICNQVSYGDMVACDNQDCPYEWFHYPCVG--ITAPPKGKWYCPQC 394 YC IC + S +++ CD CP + Y C+ +T P+G+W CP+C Sbjct: 330 YCRICKETS--NILLCDT--CPSSYHAY-CIDPPLTEIPEGEWSCPRC 372 >AF067622-3|ABD63225.1| 447|Caenorhabditis elegans Hypothetical protein F33E11.6b protein. Length = 447 Score = 34.7 bits (76), Expect = 0.092 Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 4/58 (6%) Frame = +2 Query: 257 RYC-ICNQVSYGD-MVACDNQDCPYEWFHYPCVGITAPPKGKWYC-PQCQ-TNMRRNR 418 R C ICN+ D +V CD D FH CVG+ P+G W C C NM+ NR Sbjct: 381 RLCSICNKPEKEDEIVFCDRCD---RGFHTYCVGLKKLPQGTWICDTYCAIENMKFNR 435 >Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical protein ZK593.4 protein. Length = 1477 Score = 33.5 bits (73), Expect = 0.21 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 3/54 (5%) Frame = +2 Query: 242 DPNEPRYCI-CNQVSYGDMVA-CDNQDCPYEWFHYPCVGITAP-PKGKWYCPQC 394 DP + +C+ CN+ D++ CD C Y C + P+G+W CP+C Sbjct: 315 DPMDQVFCVACNEGKDEDLLLLCDIDGCNNGRHTYCCDPVLDEVPEGEWRCPKC 368 >Z81515-10|CAH60782.1| 413|Caenorhabditis elegans Hypothetical protein F26H11.2g protein. Length = 413 Score = 32.3 bits (70), Expect = 0.49 Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 3/48 (6%) Frame = +2 Query: 260 YCICNQVSYGDMVACDNQDCPYEWFHYPCVGIT---APPKGKWYCPQC 394 YC+C Q Y D D WFH CVG T A + CP C Sbjct: 180 YCVC-QKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPAC 226 >Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical protein F26H11.2c protein. Length = 2266 Score = 32.3 bits (70), Expect = 0.49 Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 3/48 (6%) Frame = +2 Query: 260 YCICNQVSYGDMVACDNQDCPYEWFHYPCVGIT---APPKGKWYCPQC 394 YC+C Q Y D D WFH CVG T A + CP C Sbjct: 2033 YCVC-QKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPAC 2079 >Z81515-8|CAB54234.3| 692|Caenorhabditis elegans Hypothetical protein F26H11.2d protein. Length = 692 Score = 32.3 bits (70), Expect = 0.49 Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 3/48 (6%) Frame = +2 Query: 260 YCICNQVSYGDMVACDNQDCPYEWFHYPCVGIT---APPKGKWYCPQC 394 YC+C Q Y D D WFH CVG T A + CP C Sbjct: 459 YCVC-QKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPAC 505 >Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical protein F26H11.2f protein. Length = 510 Score = 32.3 bits (70), Expect = 0.49 Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 3/48 (6%) Frame = +2 Query: 260 YCICNQVSYGDMVACDNQDCPYEWFHYPCVGIT---APPKGKWYCPQC 394 YC+C Q Y D D WFH CVG T A + CP C Sbjct: 277 YCVC-QKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPAC 323 >Z81515-6|CAB04198.1| 405|Caenorhabditis elegans Hypothetical protein F26H11.2e protein. Length = 405 Score = 32.3 bits (70), Expect = 0.49 Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 3/48 (6%) Frame = +2 Query: 260 YCICNQVSYGDMVACDNQDCPYEWFHYPCVGIT---APPKGKWYCPQC 394 YC+C Q Y D D WFH CVG T A + CP C Sbjct: 172 YCVC-QKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPAC 218 >U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein 1 protein. Length = 1376 Score = 31.5 bits (68), Expect = 0.85 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 2/57 (3%) Frame = +2 Query: 233 WTYDPNEPRYCICNQVSYGDMVACDNQD--CPYEWFHYPCVGITAPPKGKWYCPQCQ 397 W E IC + +M+ CD + C E F +T P+G W+C +C+ Sbjct: 1080 WERSSREALCQICKSMDGDEMLVCDGCESGCHMECFR---PRMTKVPEGDWFCQRCR 1133 >U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418 protein. Length = 1829 Score = 30.3 bits (65), Expect = 2.0 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Frame = +2 Query: 287 GDMVACDNQDCPYEWFHYPCV--GITAPPKGKWYCPQC 394 G+++ CD CP +H C+ + PP+G W C C Sbjct: 266 GELLLCDT--CPRA-YHTVCIDENMEEPPEGDWSCAHC 300 Score = 29.1 bits (62), Expect = 4.5 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%) Frame = +2 Query: 260 YC-ICNQVSYGDMVACDNQDCPYEWFHYPCVG--ITAPPKGK-WYCPQCQT 400 +C IC + +++ CD+ C FH C+ +T PK + W CP+C+T Sbjct: 319 FCKICKETE--NLLLCDSCVCS---FHAYCIDPPLTEVPKEETWSCPRCET 364 >AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. Length = 1829 Score = 30.3 bits (65), Expect = 2.0 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Frame = +2 Query: 287 GDMVACDNQDCPYEWFHYPCV--GITAPPKGKWYCPQC 394 G+++ CD CP +H C+ + PP+G W C C Sbjct: 266 GELLLCDT--CPRA-YHTVCIDENMEEPPEGDWSCAHC 300 Score = 29.1 bits (62), Expect = 4.5 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%) Frame = +2 Query: 260 YC-ICNQVSYGDMVACDNQDCPYEWFHYPCVG--ITAPPKGK-WYCPQCQT 400 +C IC + +++ CD+ C FH C+ +T PK + W CP+C+T Sbjct: 319 FCKICKETE--NLLLCDSCVCS---FHAYCIDPPLTEVPKEETWSCPRCET 364 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,779,299 Number of Sequences: 27780 Number of extensions: 377040 Number of successful extensions: 840 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 816 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 840 length of database: 12,740,198 effective HSP length: 81 effective length of database: 10,490,018 effective search space used: 2297313942 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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