Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_I04
         (856 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          25   1.2  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      25   1.2  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   2.7  
AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    23   2.7  
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    23   2.7  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   3.6  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   3.6  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    22   6.3  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -1

Query: 598 FYGSMMFSNNIDFDKANEV*LAIPKKKY*NSNI 500
           FY ++M+SN + F + N    ++P  KY   N+
Sbjct: 297 FYSTIMYSNGVTFPQRNRF-SSLPYYKYKYLNV 328


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -1

Query: 598 FYGSMMFSNNIDFDKANEV*LAIPKKKY*NSNI 500
           FY ++M+SN + F + N    ++P  KY   N+
Sbjct: 297 FYSTIMYSNGVTFPQRNRF-SSLPYYKYKYLNV 328


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 203 PIGYPAVETDLLSNRFGEDEEAPIEVR 283
           P  Y +V T +  NRFG+D E+ + V+
Sbjct: 38  PDRYRSVATQVF-NRFGDDTESKLPVK 63


>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
 Frame = +3

Query: 390 PSSKDQTILSIEINKGKKKTQ---ALKIMR 470
           P  K QT+ SIE N  K +TQ   +LK+ R
Sbjct: 75  PDRKFQTVTSIEGNTFKTETQVNDSLKVTR 104


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
 Frame = +3

Query: 390 PSSKDQTILSIEINKGKKKTQ---ALKIMR 470
           P  K QT+ SIE N  K +TQ   +LK+ R
Sbjct: 77  PDRKFQTVTSIEGNTFKTETQVNDSLKVTR 106


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 12/49 (24%), Positives = 26/49 (53%)
 Frame = -1

Query: 643 TAN*IFSSIHVRHVVFYGSMMFSNNIDFDKANEV*LAIPKKKY*NSNIK 497
           T +   S  H++  V    ++  +N+D ++ ++  + IP KK   SN++
Sbjct: 393 TTSTTISQKHIKVFVVNKDILHEHNVDDNEDHDENMIIPPKKSDMSNMQ 441


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 291 PSPRTSMGASSSSPNLFDSKSVSTAGYP 208
           P+PR +   SSS+ +   +K  + AG P
Sbjct: 513 PNPRIASAPSSSTSSSPPAKGAAAAGQP 540


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 278 PRWELPRLPRICS 240
           PRW+L +  R+C+
Sbjct: 185 PRWDLGKFHRVCT 197


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,569
Number of Sequences: 438
Number of extensions: 4333
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)