Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_I03
         (880 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.4  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   2.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.7  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   9.7  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   9.7  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 448 ILYLIY*KRTCTVGVIYRTINLLVFNI 528
           ILY +Y   T    +IY+T N+++  +
Sbjct: 333 ILYCVYTTATYDSFMIYKTTNIIILGL 359


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 448 ILYLIY*KRTCTVGVIYRTINLLVFNI 528
           ILY +Y   T    +IY+T N+++  +
Sbjct: 58  ILYCVYTTATYDSFMIYKTTNIIILGL 84


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 645  TGTWALNTYWKGEIYEYF 698
            TG  A   Y+ G++Y+YF
Sbjct: 2523 TGHVAPLYYYPGDVYDYF 2540


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -1

Query: 649 PVPTPEPK 626
           PVPTPEP+
Sbjct: 395 PVPTPEPQ 402


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 13/50 (26%), Positives = 19/50 (38%)
 Frame = +3

Query: 519 LQYLMTRAAPEYAVLVRVLDEIRRVLPDYKPRSFFDFGSGVGTGTWALNT 668
           LQ      AP+   L+R   E R  +  +    FF+   G   G  +  T
Sbjct: 249 LQGFYPEEAPQRKELLRFASESRGSVAKFTAADFFEIDRGTFFGILSTTT 298


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,814
Number of Sequences: 336
Number of extensions: 4653
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)