Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_I02
         (905 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g17650.1 68417.m02638 aromatic-rich family protein contains P...    97   1e-20
At2g20230.1 68415.m02364 expressed protein                             28   7.4  

>At4g17650.1 68417.m02638 aromatic-rich family protein contains Pfam
           PF03654: Aromatic-Rich Protein Family
          Length = 256

 Score = 97.1 bits (231), Expect = 1e-20
 Identities = 45/97 (46%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
 Frame = +3

Query: 405 TRVYTGRQLVGYTMEQMFEVVSDVGSYNKFLPWCKKSIVLKETP-GNLKADLIIGFPPIN 581
           +++Y  R+++GYT EQMF VV+ V  Y+ F+PWC++S VLKE P G+  A+L IGF  + 
Sbjct: 97  SKIYEERRVLGYTPEQMFNVVAAVDLYHGFVPWCQRSEVLKEYPDGSFDAELEIGFKFLV 156

Query: 582 ESYTSNVTLVKPHLVKAECSDGRLFHHMLTLWRFSPG 692
           ESY S+V   +P  +K    D  LF H++ LW+F PG
Sbjct: 157 ESYISHVESERPKWIKTTARDTGLFDHLINLWQFKPG 193



 Score = 34.7 bits (76), Expect = 0.085
 Identities = 12/36 (33%), Positives = 25/36 (69%)
 Frame = +1

Query: 712 SCVVDFQITFEFRSAIHSHLSNLFFDQVARQMEGAF 819
           +C + F + F+F S ++  ++++FF +VA ++ GAF
Sbjct: 198 TCDLHFHVDFKFNSPLYRQVASMFFKEVASRLVGAF 233


>At2g20230.1 68415.m02364 expressed protein
          Length = 270

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -1

Query: 419 SINSCFVCYWQVYKTTILLLNA 354
           +IN C +C++ + KT ++LL A
Sbjct: 124 AINGCCLCFYSILKTLLILLEA 145


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,147,818
Number of Sequences: 28952
Number of extensions: 348369
Number of successful extensions: 822
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2139598560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)