Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_I01
(963 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 39 0.001
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.060
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.98
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.7
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 3.0
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 26 9.1
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 39.1 bits (87), Expect = 0.001
Identities = 20/57 (35%), Positives = 21/57 (36%), Gaps = 3/57 (5%)
Frame = +2
Query: 683 PPPPXXX---PXXXXXXXSPPPGXXGGXPPPXPPXXXXQXXXXXXXPPPPPXXXGGA 844
PPPP P PP GG PPP PP PPPP GG+
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGS 790
Score = 36.7 bits (81), Expect = 0.005
Identities = 20/54 (37%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Frame = +2
Query: 758 PPPXPPXXXXQXXXXXXXP-PPPPXXXGGAXPXXXXXGXXGXXPPXXSXPXPPP 916
PPP PP P PPP GG P G G PP P PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPP--PPPPPPP 783
Score = 30.3 bits (65), Expect = 0.42
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 1/48 (2%)
Frame = +2
Query: 683 PPPPXXXPXXXXXXXSPPPGXXG-GXPPPXPPXXXXQXXXXXXXPPPP 823
P PP PPPG G G PPP PP P P
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAP 797
Score = 27.5 bits (58), Expect = 3.0
Identities = 17/69 (24%), Positives = 18/69 (26%)
Frame = +1
Query: 490 PPPGXPXLXPXXXXXXXXXXPPXXGXGGLGXXXXXGGXXGGPPXPPXXPXXXXXGGKGGX 669
PPP + P PP GG G G P PP P G
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRY 792
Query: 670 XXXXPXPSP 696
P P
Sbjct: 793 YAPAPQAEP 801
Score = 25.8 bits (54), Expect = 9.1
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +2
Query: 608 GXPPXPXXPPXXXXGGXKGGXXXXXPPPPXXXPXXXXXXXSPPP 739
G PP P PP G G PPPP +P P
Sbjct: 759 GGPPPPPPPP-----GVAGAGPPPPPPPPPAVSAGGSRYYAPAP 797
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.1 bits (72), Expect = 0.060
Identities = 39/165 (23%), Positives = 43/165 (26%), Gaps = 6/165 (3%)
Frame = +2
Query: 440 KXXXXPXPPXAGGXPXXPPXGGXXSXXXXXXXXGXXPPRXXAXXVWGXXAXXGXXXGXPP 619
K P PP + PP G S PPR A G PP
Sbjct: 308 KKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPP--PPPRSNAA---GSIPLPPQGRSAPP 362
Query: 620 XPXXPPXXXXGGXKGGXXXXXPPPPXXXPXXXXXXXSPPPGXXGGXPPPXPPXXXXQXXX 799
P PP + PPP +PPP G P PP
Sbjct: 363 PP--PP-------RSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTS 413
Query: 800 XXXXPPPP------PXXXGGAXPXXXXXGXXGXXPPXXSXPXPPP 916
P PP P + P G P S P PP
Sbjct: 414 TPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Score = 28.3 bits (60), Expect = 1.7
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 813 PPPPPXGXGGXXPXXXGXAXRXXXPPXPPXP 905
PPPPP P + PP PP P
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 27.5 bits (58), Expect = 3.0
Identities = 16/61 (26%), Positives = 16/61 (26%)
Frame = +2
Query: 734 PPGXXGGXPPPXPPXXXXQXXXXXXXPPPPPXXXGGAXPXXXXXGXXGXXPPXXSXPXPP 913
PP PP PP PP P A P PP P P
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPA 479
Query: 914 P 916
P
Sbjct: 480 P 480
Score = 27.1 bits (57), Expect = 3.9
Identities = 16/59 (27%), Positives = 18/59 (30%), Gaps = 1/59 (1%)
Frame = +1
Query: 616 PXPPXXPXXXXXGGKGGXXXXXPXPSPXXPXXXXXXXLPPPRXXGGXXPPPXPP-XPXP 789
P PP P P +P P + PP G PP PP P P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476
Score = 25.8 bits (54), Expect = 9.1
Identities = 16/58 (27%), Positives = 17/58 (29%), Gaps = 1/58 (1%)
Frame = +1
Query: 613 PPXPPXXPXXXXXGGKGGXXXXXPXPSPXXPXXXXXXXLPPPRXXGGXXPPPXP-PXP 783
P PP P G P +P P PP PPP P P P
Sbjct: 429 PSLPPSAPPSLPMGAPAAPPL--PPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 29.1 bits (62), Expect = 0.98
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = -1
Query: 774 GGXGGGXPPXXPGGGEXXXXXXXGXXXGGGGXXXXXPPFXPPLXXXGGXXGXGGXP 607
GG GG PP G G G GG G P GG G GG P
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPG-----GFEGGPGGFGGGP 244
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.3 bits (60), Expect = 1.7
Identities = 24/105 (22%), Positives = 26/105 (24%), Gaps = 4/105 (3%)
Frame = +2
Query: 614 PPXPXX---PPXXXXGGXKGGXXXXXPPPPXXXPXXXXXXXSPPPGXXGGXPPPXPPXXX 784
PP P PP P P P +PP G PP P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVA 1100
Query: 785 XQXXXXXXXPPPPPXXXGGAXPXXXXXGXXGXXP-PXXSXPXPPP 916
PP GA P P P + P P P
Sbjct: 1101 APPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKP 1145
Score = 28.3 bits (60), Expect = 1.7
Identities = 32/155 (20%), Positives = 34/155 (21%), Gaps = 1/155 (0%)
Frame = +2
Query: 455 PXPPXAGGXPXXPPXGGXXSXXXXXXXXGXXPPRXXAXXVWGXXAXXGXXXGXPPXPXXP 634
P P + G P PP S P A G PP P
Sbjct: 1051 PVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPS--GIPPVPKPSVAAPPVPKPS 1108
Query: 635 PXXXXGGXKGGXXXXXPPPPXXXPXXXXXXXSPPPGXXGGXPPPXPPXXXXQXXXXXXXP 814
G P P P P PP P
Sbjct: 1109 VAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAA 1168
Query: 815 PPPPXXXGGAXPXXXXX-GXXGXXPPXXSXPXPPP 916
PP P G P G PP + P P P
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 27.1 bits (57), Expect = 3.9
Identities = 26/115 (22%), Positives = 27/115 (23%), Gaps = 1/115 (0%)
Frame = +2
Query: 608 GXPPXPXXPPXXXXGGXKGGXXXXXPPPPXXXPXXXXXXXSPP-PGXXGGXPPPXPPXXX 784
G PP P P P P +PP P G PP PP
Sbjct: 1157 GAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTA 1216
Query: 785 XQXXXXXXXPPPPPXXXGGAXPXXXXXGXXGXXPPXXSXPXPPPXXPHKXXXXXP 949
PP P A P P S P PH P
Sbjct: 1217 PPVPTPSAGLPPVPVPTAKAPPVP----APSSEAPSVSTPRSSVPSPHSNASPSP 1267
Score = 27.1 bits (57), Expect = 3.9
Identities = 16/57 (28%), Positives = 16/57 (28%), Gaps = 2/57 (3%)
Frame = +3
Query: 351 PLXXGXXPPXXXXXLGGTPXPPXKXX--TXKKKXXXXPNPPXRGXPPXXPPXXAXPP 515
P PP G P PP K P PP PP P PP
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Score = 25.8 bits (54), Expect = 9.1
Identities = 16/56 (28%), Positives = 16/56 (28%), Gaps = 1/56 (1%)
Frame = +3
Query: 351 PLXXGXXP-PXXXXXLGGTPXPPXKXXTXKKKXXXXPNPPXRGXPPXXPPXXAXPP 515
P G P P P P K P P G PP P A PP
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPP 1170
Score = 25.8 bits (54), Expect = 9.1
Identities = 20/79 (25%), Positives = 22/79 (27%), Gaps = 1/79 (1%)
Frame = +2
Query: 683 PPPPXXXPXXXXXXXSPP-PGXXGGXPPPXPPXXXXQXXXXXXXPPPPPXXXGGAXPXXX 859
P P P +PP P G PP P PP P G P
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP--- 1209
Query: 860 XXGXXGXXPPXXSXPXPPP 916
PP + P P P
Sbjct: 1210 ------VPPPSTAPPVPTP 1222
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.5 bits (58), Expect = 3.0
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +2
Query: 752 GXPPPXPPXXXXQXXXXXXXPPPP 823
G PPP PP + PPPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 3.9
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 730 PPPRXXGGXXPPPXPPXPXP 789
PPP G PP PP P P
Sbjct: 10 PPPPPPPGFEPPSQPPPPPP 29
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 25.8 bits (54), Expect = 9.1
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 727 LPPPRXXGGXXPPPXPPXPXP 789
+P P+ G PPP PP P P
Sbjct: 346 MPTPQVQGSRPPPP-PPMPAP 365
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,937,144
Number of Sequences: 5004
Number of extensions: 31290
Number of successful extensions: 221
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 130
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 493304942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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