Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_I01
         (963 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    29   0.16 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    28   0.37 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   0.82 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   0.85 
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            27   1.1  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    23   1.4  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          24   6.0  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   7.9  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 29.5 bits (63), Expect = 0.16
 Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 2/50 (4%)
 Frame = +2

Query: 623 PXXPPXXXXGGXKGGXXXXXPPPPXXXPXXXXXXXSPPPG--XXGGXPPP 766
           P  PP    GG  GG      P     P        PP G    GG PPP
Sbjct: 297 PPRPPMPMQGGAPGGPPQGMRPNFYNRPMGDPQTSRPPSGNDNMGGGPPP 346



 Score = 29.1 bits (62), Expect = 0.21
 Identities = 22/81 (27%), Positives = 22/81 (27%), Gaps = 4/81 (4%)
 Frame = +2

Query: 686 PPPXXXPXXXXXXXSPPPGXXGGXPPPXPPXXXXQXXXXXXXPPP--PPXXXGGAXP--X 853
           PP    P          PG   G  P  P     Q       PPP  PP   GG  P   
Sbjct: 221 PPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPIRPPNPMGGPRPQIS 280

Query: 854 XXXXGXXGXXPPXXSXPXPPP 916
                  G  P     P  PP
Sbjct: 281 PQNSNLSGGMPSGMVGPPRPP 301


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 28.3 bits (60), Expect = 0.37
 Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 2/50 (4%)
 Frame = -1

Query: 825 GGGGGXXXXXXXWXXXXGGXGGGXP--PXXPGGGEXXXXXXXGXXXGGGG 682
           GGGGG            GG  GG    P   G G        G   GGGG
Sbjct: 518 GGGGGSGCVNGSRTVGAGGMAGGGSDGPEYEGAGRGGVGSGIGGGGGGGG 567



 Score = 27.9 bits (59), Expect = 0.48
 Identities = 17/57 (29%), Positives = 17/57 (29%)
 Frame = -2

Query: 929 CXGXXGGGGXGRXGGGXXPXGXXXXXXXXXXXXXXXXXXGEXXXXXXGXGXGGXGGG 759
           C G  GGGG G  GGG    G                  G       G   GG  GG
Sbjct: 811 CGGNGGGGGAGASGGGFLITGDPSDTIGAGGGGAGGPLRGSSGGAGGGSSGGGGSGG 867



 Score = 27.1 bits (57), Expect = 0.85
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -2

Query: 923 GXXGGGGXGRXGGGXXPXG 867
           G  GGGG GR GGG    G
Sbjct: 561 GGGGGGGGGRAGGGVGATG 579



 Score = 24.2 bits (50), Expect = 6.0
 Identities = 17/54 (31%), Positives = 17/54 (31%)
 Frame = -1

Query: 774 GGXGGGXPPXXPGGGEXXXXXXXGXXXGGGGXXXXXPPFXPPLXXXGGXXGXGG 613
           GG GGG      GGG            G GG     P         GG  G GG
Sbjct: 812 GGNGGGGGAGASGGG-FLITGDPSDTIGAGGGGAGGPLRGSSGGAGGGSSGGGG 864



 Score = 23.8 bits (49), Expect = 7.9
 Identities = 20/67 (29%), Positives = 20/67 (29%)
 Frame = -1

Query: 930 LXGXXGGGXGXEXXGGXXPXXPXXXXXGXAPPXXXGGGGGXXXXXXXWXXXXGGXGGGXP 751
           L G  GGG G    GG             A     GGG G            G  GGG  
Sbjct: 810 LCGGNGGGGGAGASGGGFLITGDPSDTIGA----GGGGAGGPLRGSSGGAGGGSSGGGGS 865

Query: 750 PXXPGGG 730
               GGG
Sbjct: 866 GGTSGGG 872


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 2.6
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = +2

Query: 614 PPXPXXPPXXXXGGXKGGXXXXXPPPP 694
           PP    PP    GG  GG     PP P
Sbjct: 588 PPPMGPPPSPLAGGPLGGPAGSRPPLP 614



 Score = 24.6 bits (51), Expect = 4.5
 Identities = 20/80 (25%), Positives = 21/80 (26%), Gaps = 2/80 (2%)
 Frame = +3

Query: 456 PNPPXRGXPPXXPPXXAXPPXXXXXXXXGGXPPAAXXGXFGXXXXXGGXX--GGXPPPPX 629
           P PP  G     PP    PP            PA      G              PPPP 
Sbjct: 532 PPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPPPPM 591

Query: 630 XPXXXXXGGXRGXXPXGAXP 689
            P      G     P G+ P
Sbjct: 592 GPPPSPLAGGPLGGPAGSRP 611



 Score = 24.6 bits (51), Expect = 4.5
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +1

Query: 886 PPXLPXPPPPXXP 924
           PP  P PPPP  P
Sbjct: 581 PPPAPPPPPPMGP 593



 Score = 24.2 bits (50), Expect = 6.0
 Identities = 10/27 (37%), Positives = 10/27 (37%)
 Frame = +2

Query: 683 PPPPXXXPXXXXXXXSPPPGXXGGXPP 763
           PPPP   P        P  G  G  PP
Sbjct: 586 PPPPPMGPPPSPLAGGPLGGPAGSRPP 612



 Score = 23.8 bits (49), Expect(2) = 0.82
 Identities = 18/67 (26%), Positives = 20/67 (29%), Gaps = 2/67 (2%)
 Frame = +1

Query: 595 GGXXGGPPXPPXXPXXXXXGGKGGXXXXXPXPSPXXPXXXXXXXLPP--PRXXGGXXPPP 768
           GG  G PP PP          +          +P  P        P   P       PPP
Sbjct: 525 GGPLGPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQ-PPP 583

Query: 769 XPPXPXP 789
            PP P P
Sbjct: 584 APPPPPP 590



 Score = 23.8 bits (49), Expect = 7.9
 Identities = 15/58 (25%), Positives = 15/58 (25%)
 Frame = +2

Query: 752 GXPPPXPPXXXXQXXXXXXXPPPPPXXXGGAXPXXXXXGXXGXXPPXXSXPXPPPXXP 925
           G PPP PP            PPP         P            P      PPP  P
Sbjct: 529 GPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPP 586



 Score = 21.4 bits (43), Expect(2) = 0.82
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +1

Query: 868 PXGXXPPPXLPXPPPP 915
           P    PPP +  PP P
Sbjct: 582 PPAPPPPPPMGPPPSP 597


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.1 bits (57), Expect = 0.85
 Identities = 18/57 (31%), Positives = 18/57 (31%)
 Frame = -2

Query: 782 GXGGXGGGXXPPXXRGGGXXXXXXXXGXXGEGXGXXXXXPPXPPXXXXXGXXGGXGG 612
           G GG G G   P   GGG        G  G G G               G  GG GG
Sbjct: 201 GAGGGGSGGGAPG--GGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGGGG 255



 Score = 27.1 bits (57), Expect = 0.85
 Identities = 18/54 (33%), Positives = 18/54 (33%)
 Frame = -1

Query: 774 GGXGGGXPPXXPGGGEXXXXXXXGXXXGGGGXXXXXPPFXPPLXXXGGXXGXGG 613
           G  GGG     PGGG        G   GGGG               GG  G GG
Sbjct: 201 GAGGGGSGGGAPGGG-GGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGG 253



 Score = 25.8 bits (54), Expect = 2.0
 Identities = 14/33 (42%), Positives = 14/33 (42%)
 Frame = -3

Query: 910 GXGXGGXGGXXXRXAXPXXXGXXPPXPXGGGGG 812
           G G GG GG           G   P P GGGGG
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGG---PGPGGGGGG 230


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -2

Query: 623 GXGGPPXXPPXXXXXPKPPXP 561
           G GGP   PP     P PP P
Sbjct: 740 GAGGPSSSPPVMESIPPPPKP 760


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 23.4 bits (48), Expect(2) = 1.4
 Identities = 12/34 (35%), Positives = 13/34 (38%)
 Frame = -2

Query: 782 GXGGXGGGXXPPXXRGGGXXXXXXXXGXXGEGXG 681
           G GG GGG      RGG         G  G+  G
Sbjct: 71  GRGGRGGGRGRGRGRGGRDGGGGFGGGGYGDRNG 104



 Score = 21.0 bits (42), Expect(2) = 1.4
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = -2

Query: 923 GXXGGGGXGRXGGGXXPXG 867
           G  GGG  G  GGG    G
Sbjct: 55  GGYGGGDDGYGGGGRGGRG 73


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 24.2 bits (50), Expect = 6.0
 Identities = 14/52 (26%), Positives = 14/52 (26%)
 Frame = -1

Query: 762 GGXPPXXPGGGEXXXXXXXGXXXGGGGXXXXXPPFXPPLXXXGGXXGXGGXP 607
           G   P   GGG        G    G G     PP   P        G G  P
Sbjct: 539 GPVGPAGVGGGGGGGGGGGGGGVIGSGSTTRLPPLHQPFPMLANHAGGGAIP 590



 Score = 23.8 bits (49), Expect = 7.9
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -2

Query: 923 GXXGGGGXGRXGGGXXPXG 867
           G  GGGG G  GGG    G
Sbjct: 545 GVGGGGGGGGGGGGGGVIG 563



 Score = 23.8 bits (49), Expect = 7.9
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -2

Query: 923 GXXGGGGXGRXGGGXXPXG 867
           G  GGGG G  GGG    G
Sbjct: 547 GGGGGGGGGGGGGGVIGSG 565


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.8 bits (49), Expect = 7.9
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -2

Query: 923 GXXGGGGXGRXGGGXXPXG 867
           G  GGGG G  GGG    G
Sbjct: 651 GSGGGGGGGGGGGGSVGSG 669


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 587,099
Number of Sequences: 2352
Number of extensions: 12652
Number of successful extensions: 130
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 108
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 105843456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)