Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_H24
         (874 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    26   0.44 
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    26   0.44 
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    22   7.2  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 25.8 bits (54), Expect = 0.44
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -1

Query: 133 VPQHNYSFLRKLCCILIFTLEPIDKTHTTCQILRIPYSES 14
           VPQ+ +     L CIL  TLE I  T T C++  + Y  +
Sbjct: 272 VPQNFHDIFLPLLCILTNTLE-ILITVTVCELTILEYKRT 310


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 25.8 bits (54), Expect = 0.44
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -1

Query: 133 VPQHNYSFLRKLCCILIFTLEPIDKTHTTCQILRIPYSES 14
           VPQ+ +     L CIL  TLE I  T T C++  + Y  +
Sbjct: 97  VPQNFHDIFLPLLCILTNTLE-ILITVTVCELTILEYKRT 135


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 6/16 (37%), Positives = 14/16 (87%)
 Frame = +1

Query: 724 DMRDSIINDARDLIGD 771
           D++++I+ + RD++GD
Sbjct: 17  DVQETILQEMRDVLGD 32


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,574
Number of Sequences: 336
Number of extensions: 4397
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24099889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)