Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_H24
(874 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032655-4|CAB63413.2| 485|Caenorhabditis elegans Hypothetical ... 64 9e-11
U80029-19|AAB37598.1| 139|Caenorhabditis elegans Hypothetical p... 31 0.81
Z37139-9|CAA85493.1| 396|Caenorhabditis elegans Hypothetical pr... 30 1.9
U64601-8|AAB04576.2| 413|Caenorhabditis elegans Hypothetical pr... 30 1.9
U40945-1|AAA81719.2| 656|Caenorhabditis elegans Hypothetical pr... 30 1.9
U40416-1|AAA81410.2| 822|Caenorhabditis elegans Protein kinase ... 30 1.9
AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical... 30 1.9
AF403714-1|AAK97497.1| 822|Caenorhabditis elegans serine/threon... 30 1.9
AF036704-5|AAB88558.2| 360|Caenorhabditis elegans Hypothetical ... 29 5.7
>AL032655-4|CAB63413.2| 485|Caenorhabditis elegans Hypothetical
protein Y6B3B.9 protein.
Length = 485
Score = 64.5 bits (150), Expect = 9e-11
Identities = 48/146 (32%), Positives = 70/146 (47%), Gaps = 9/146 (6%)
Frame = +1
Query: 151 EWLKVMNLIYSEN-SDENEALKWLLLWKARC-PSLPSGIESTLILLQVHIQDLNSPDDNG 324
EW V L S D E + L W +R + P I + +LLQ +L S
Sbjct: 17 EWKYVRQLFRSRRIEDVKECVIILATWISRTGENTPVAISCSHVLLQAIYAELLSTGMCE 76
Query: 325 NDHV-----LRLAYSSAIMRFINHMLDVSITKEN--TLSKAAKNVGIPDWIVELRHDTAH 483
++ LR + AI+RF+N++ ++ T + A K+ GIP IV++RH H
Sbjct: 77 SERYMAIDDLRSKHGYAIVRFVNYVNEMGQTGATLKNMVHAVKSFGIPKKIVDIRHAITH 136
Query: 484 NNNLPSLSLLRDATQFGLDWLKSNYW 561
N P ++ LR AT F LDWL N+W
Sbjct: 137 QN-CPDIAELRYATNFCLDWLWKNFW 161
>U80029-19|AAB37598.1| 139|Caenorhabditis elegans Hypothetical
protein T20D4.19 protein.
Length = 139
Score = 31.5 bits (68), Expect = 0.81
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Frame = +1
Query: 574 LLITDYKSGRQETDSQEETRVMILVNFCISLSICSNS-ECKIKTLADIVDVDM----RDS 738
L + DY E D ++T V C SL+ C + +C ++T +D +V M ++
Sbjct: 48 LRLADYVEKMYELDMTDKTEVNEFEKSCTSLTSCLETIQCGLETQSDKKNVKMIKNYCEA 107
Query: 739 IINDARDLIGDNIQLSNLRQVLFQH 813
++ D++D + +L N + + +
Sbjct: 108 VVYDSKDFAECSEKLENENSICYNN 132
>Z37139-9|CAA85493.1| 396|Caenorhabditis elegans Hypothetical
protein C14B1.5 protein.
Length = 396
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/86 (19%), Positives = 38/86 (44%)
Frame = +1
Query: 469 HDTAHNNNLPSLSLLRDATQFGLDWLKSNYWKEHKLLITDYKSGRQETDSQEETRVMILV 648
HD N + S+ + R T FGL ++ ++ L + + + E ++ RV++
Sbjct: 246 HDLMRKNRIGSIEIARKCTTFGL--IQGTLGRQGNLKVVEELEAQLERKGKKFLRVLLSE 303
Query: 649 NFCISLSICSNSECKIKTLADIVDVD 726
F L++ +C ++ + +D
Sbjct: 304 IFPEKLAMFPEVDCWVQVACPRLSID 329
>U64601-8|AAB04576.2| 413|Caenorhabditis elegans Hypothetical
protein M03F4.6 protein.
Length = 413
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 667 SICSNSECKIKTLADIVDVDMRDSIINDARDLIGDNIQ 780
S+C NS C T + D+D R +I A IGD+ Q
Sbjct: 46 SVCRNSRCTCPTNFEEYDIDERTTICRLAPAKIGDSCQ 83
>U40945-1|AAA81719.2| 656|Caenorhabditis elegans Hypothetical
protein F10D7.1 protein.
Length = 656
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = -1
Query: 595 IYSLL*EVYVLSNNLTLANQAQIALHL*AVTMKADYYCGQCHVSIPLSNLEYLHFS 428
I +LL VY+L+ L + L L + D C C++ L N+ + HFS
Sbjct: 28 ITALLVNVYLLNCARYLRRPVSVNLRLCVFLLACDALCSLCYIFTYLINIFFSHFS 83
>U40416-1|AAA81410.2| 822|Caenorhabditis elegans Protein kinase
protein 29 protein.
Length = 822
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -1
Query: 109 LRKLCCILIFTLEPIDKTHTTCQILRIPYSES 14
+R + C L FT E ID+ + IL+IP+SES
Sbjct: 723 VRSIVCTLPFT-EVIDELKASLNILKIPFSES 753
>AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical
protein Y66D12A.14 protein.
Length = 2870
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/72 (20%), Positives = 36/72 (50%)
Frame = +1
Query: 241 PSLPSGIESTLILLQVHIQDLNSPDDNGNDHVLRLAYSSAIMRFINHMLDVSITKENTLS 420
P+LP+ +ES L + + LN P+ + +DH + S ++ + H+++ + +
Sbjct: 2579 PTLPNSLESDLSSIWTSL--LNCPEPSPSDHFFLIGGHSLLLVRLRHLIETKLGISLKVP 2636
Query: 421 KAAKNVGIPDWI 456
+ +N+ D +
Sbjct: 2637 EILQNLKFSDML 2648
>AF403714-1|AAK97497.1| 822|Caenorhabditis elegans serine/threonine
kinase KIN-29 protein.
Length = 822
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -1
Query: 109 LRKLCCILIFTLEPIDKTHTTCQILRIPYSES 14
+R + C L FT E ID+ + IL+IP+SES
Sbjct: 723 VRSIVCTLPFT-EVIDELKASLNILKIPFSES 753
>AF036704-5|AAB88558.2| 360|Caenorhabditis elegans Hypothetical
protein ZK185.1 protein.
Length = 360
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 178 YSENSDENEALKWLLLWKA-RCPSLPSGIESTLILLQVHIQDLNSPDD 318
+ E+ DE EA + W+ +CP E+T LL+ ++D P D
Sbjct: 62 FDEDGDEIEATATKIEWQPLKCPKCHRNSENTRKLLEHLVEDHGRPQD 109
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,664,004
Number of Sequences: 27780
Number of extensions: 378072
Number of successful extensions: 1015
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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